In [1]:
%matplotlib inline
import matplotlib.pyplot as plt
plt.style.use('seaborn')
import numpy as np
import pandas as pd
from sklearn.decomposition import PCA
from sklearn.mixture import GaussianMixture
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from jupyterworkflow.data import get_fremont_data
data = get_fremont_data()
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pivoted = data.pivot_table('Total', index=data.index.time, columns = data.index.date)
pivoted.plot(legend=False, alpha=0.01);
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X = pivoted.fillna(0).T.values
X.shape
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X2 = PCA(2, svd_solver='full').fit_transform(X)
X2.shape
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plt.scatter(X2[:, 0], X2[:, 1]);
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gmm = GaussianMixture(2).fit(X)
labels = gmm.predict(X)
labels
Out[7]:
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plt.scatter(X2[:, 0], X2[:, 1], c=labels, cmap='rainbow')
plt.colorbar();
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fig, ax = plt.subplots(1, 2, figsize=(14, 6))
pivoted.T[labels == 0].T.plot(legend=False, alpha=0.1, ax=ax[0])
pivoted.T[labels == 1].T.plot(legend=False, alpha=0.05, ax=ax[1])
ax[0].set_title('Red Cluster')
ax[1].set_title('Purple Cluster');
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dayofweek = pd.DatetimeIndex(pivoted.columns).dayofweek
plt.scatter(X2[:, 0], X2[:, 1], c=dayofweek, cmap='rainbow')
plt.colorbar();
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dates = pd.DatetimeIndex(pivoted.columns)
dates[(labels == 0) & (dayofweek < 5)]
Out[11]:
What's up with Feb 6, 2017? Snow storm
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