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%matplotlib inline

Interpolate bad channels

Use suggest_bads to automatically identify bad MEG channels and use interpolate_bads based on the center of mass of the sensors for bad channel correction.



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import mne
from mne.datasets import sample
from jumeg import suggest_bads
from jumeg import interpolate_bads

data_path = sample.data_path()
subjects_dir = data_path + '/subjects'

fname_raw = data_path + '/MEG/sample/sample_audvis_raw.fif'

raw = mne.io.Raw(fname_raw, preload=True)
mybads, raw = suggest_bads(raw, show_raw=False, summary_plot=False)

# origin = None causes the method to use the sensor center of mass as origin
interpolate_bads(raw, origin=None, reset_bads=True)