In [1]:
import pymongo
from pymongo import MongoClient
mongo_url = 'mongodb://localhost:27017/'
db = 'CamSim'
coll_in = 'CamHarvest'
coll_out = 'CamAuthors'
client = MongoClient(mongo_url)
ch = client[db][coll_in]
ca = client[db][coll_out]
In [65]:
ca.find_one()
ca.create_index([('name',pymongo.TEXT)],default_language='english')
ch.create_index([('title',pymongo.TEXT)],default_language='english')
Out[65]:
u'title_text'
In [69]:
nam = 'dynamic'
cursor = client[db].command('text','CamAuthors',search=nam)
cursor = client[db].command('text','CamHarvest',search=nam)
In [2]:
'''for rec in cursor['results']:
print(rec['obj']['title'])
'''
Out[2]:
"for rec in cursor['results']:\n print(rec['obj']['title'])\n"
In [3]:
'''curs = ca.find()
for rec in curs:
print(rec['name'])
'''
Out[3]:
"curs = ca.find()\nfor rec in curs:\n print(rec['name'])\n"
In [32]:
cursor = ca.find({'sims':{'$exists':1}},no_cursor_timeout=True)
i = 0
for rec in cursor:
print(rec['name'] + ' ' +str(i))
i+=1
lc smeeton 0
lk chan 1
ap ivanov 2
h-f chow 3
t rovis 4
g filippini 5
e esposito 6
y chebaro 7
ka thomas 8
r mezzenga 9
e ertekin 10
aj liu 11
ic mangialavori 12
tv o'halloran 13
n shivananju 14
ap johnson 15
va makarov 16
f kawasaki 17
gt heller 18
i landrieu 19
aj mcconnell 20
e bouvier 21
a nekrutenko 22
s gérard 23
a oliynyk 24
kh sutherland-casha 25
r gajić 26
lh thamdrup 27
ra stockman 28
sj fernstad 29
aj kooistra 30
n cohrs 31
sb lou 32
em llamas 33
d montes-grajales 34
yk motamedi 35
m peymani 36
mh nasr-esfahani 37
c combadière 38
r barton 39
c huynen 40
n willet 41
q lu 42
hg hiscock 43
xd liu 44
nm wilf 45
f kundel 46
pms cunha 47
z rong 48
v andré 49
j negele 50
ac brańka 51
s ball 52
lc andreani 53
jl sussman 54
ce atkinson 55
p deoliveira 56
jg kircz 57
y kong 58
c rovira 59
p bernadó 60
h clausen 61
a lostao 62
p nogueira 63
j freitas 64
g lacroix 65
a moreira 66
jp rossi 67
p braeuninger-weimer 68
z cournia 69
tw allen 70
i andricioaei 71
b antonny 72
d baum 73
g brannigan 74
jt deckman 75
l delemotte 76
c del val 77
r friedman 78
p gkeka 79
hc hege 80
j hénin 81
ma kasimova 82
a kolocouris 83
mj lemieux 84
n lindow 85
m roy 86
j selent 87
m tarek 88
f tofoleanu 89
s vanni 90
s urban 91
jc smith 92
an bondar 93
ys yu 94
c kim 95
da shapiro 96
m farmand 97
t tyliszczak 98
al kilcoyne 99
r celestre 100
s marchesini 101
j joseph 102
p denes 103
t warwick 104
h padmore 105
s castillón 106
i sovago 107
r pini 108
j castro-lõpez 109
i compañõn 110
m salvadõ 111
rc walsh 112
tds young 113
t cao 114
c chen 115
h jia 116
x zhou 117
c calero 118
j martí 119
a sinha 120
pr preiser 121
r chandramohanadas 122
ia boutle 123
ob riabova 124
dm walther 125
p kasturi 126
m zheng 127
g vecchi 128
m mann 129
re hardisty 130
hm walker 131
a colette 132
e-r janeček 133
ns gandhi 134
ljc jeuken 135
m charnley 136
a renzetti 137
a di crescenzo 138
j sapi 139
c villani 140
j medley-hallam 141
fr manby 142
pp upadhyay 143
me briggs 144
ag slater 145
jj velasco-velez 146
v pfeifer 147
r arrigo 148
p biswas 149
j ma 150
wn zhao 151
sd kloss 152
e meneguz 153
pj butterworth 154
wd blaylock 155
se dutton 156
n nikolovski 157
dm lienhard 158
c teichert 159
l brégonzio-rozier 160
js bett 161
ms ritorto 162
r ewan 163
eg jaffray 164
a knebel 165
t kurz 166
m trost 167
mh tatham 168
rt hay 169
wa vigor 170
t nielsen 171
ma parniak 172
a szumska 173
wa vitale 174
hr maier 175
u schlink 176
y luo 177
b brennan 178
m ouyang 179
aj johnston 180
mc chen 181
j zhu 182
s kanemura 183
p jenö 184
t teşileanu 185
s leibler 186
r labes 187
f palazzesi 188
mi walker 189
naw bell 190
jk harada 191
pj nowack 192
gs rauber 193
s de vito 194
p delli veneri 195
m salvato 196
m yagi-utsumi 197
hk fung 198
mco figueiredo 199
a matsuoka 200
t isogawa 201
y morioka 202
ma shehata 203
el hogg 204
bcm martindale 205
ge folkers 206
m kaplan 207
ea van der cruijsen 208
j dworzak 209
m beltrandi 210
s bolisetty 211
t korcsmaros 212
k roberts 213
a fernández-tejada 214
bg de la torre 215
j heer 216
o kennedy 217
g henkelman 218
as duwez 219
a šarić 220
jb wagner 221
t ouchi 222
r kostecki 223
bc hong 224
s illingworth 225
dm dias 226
h wienk 227
s patil 228
m huntley 229
ar langley 230
dkh ho 231
p thiruvenkatanathan 232
jc kim 233
cj moore 234
je ladbury 235
y furukawa 236
n begum 237
a luque 238
c hussal 239
g stephenson 240
e abad 241
a samal 242
av uversky 243
l baker 244
a martínez 245
b list 246
s judge 247
l towers 248
b falcone 249
a klöckner 250
m karesoja 251
l guan 252
g dietler 253
p imhof 254
s selvaraj 255
pm cal 256
j seitsonen 257
z-k tan 258
rr teixeira 259
a salomone 260
v ivaništšev 261
l oriol 262
d gharbharan 263
lt law 264
d capsoni 265
In [92]:
cursor = ca.find({'sims':{'$exists':1}},no_cursor_timeout=True)
#be = np.arange(-1,1.01,0.01)
#hist_ac = np.zeros(200)
be = np.arange(-1,1.1,0.1)
hist_ac = np.zeros(20)
ind = 0
for rec in cursor:
name = rec['name']
sims = rec['sims'][:]
for s in rec['sims']:
if s.keys()[0]==name:
sims.remove(s)
float_sims = [si.values()[0] for si in sims]
hist,be = np.histogram(float_sims, bins=be)
hist_ac+=hist
ind+=1
print(str(ind) + ' completed')
bc = []
for i in range(len(be)-1):
bc.append((be[i]+be[i+1])/2)
plt.plot(bc,hist_ac)
plt.show()
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In [59]:
import numpy as np
import matplotlib.pyplot as plt
bins = 200
hist,be = np.histogram(float_sims, bins=bins)
print(hist)
plt.plot(bc,hist)
plt.show()
[ 4 0 0 0 0 0 0 0 0 0 0 2 3 0 2 0 0 1
0 0 0 1 3 0 3 0 1 1 0 0 12 0 0 63 0 1
0 2 0 0 0 0 0 1 17 0 0 4 6 4 9 7 29 22
28 23 34 59 39 49 63 63 100 93 83 78 102 84 72 100 79 63
93 74 45 71 522 85 86 71 105 101 93 98 94 78 77 100 96 60
100 72 73 88 75 139 91 92 108 83 77 101 87 97 87 139 110 107
98 162 106 97 111 117 126 105 138 122 126 231 157 134 194 169 164 175
142 142 119 139 165 161 181 156 168 205 157 157 167 153 164 154 200 193
210 270 198 210 215 220 197 165 190 174 178 321 215 233 259 434 195 285
229 232 302 275 239 240 246 282 256 261 291 296 341 298 270 267 274 274
234 266 212 246 189 166 124 127 122 94 63 51 27 14 15 7 5 1
2 4]
In [58]:
bc = []
for i in range(len(be)-1):
bc.append((be[i]+be[i+1])/2)
In [89]:
bc = []
for i in range(len(be)-1):
bc.append((be[i]+be[i+1])/2)
plt.plot(bc,hist_ac)
plt.show()
In [90]:
hist_ac
Out[90]:
array([ 0.00000000e+00, 0.00000000e+00, 0.00000000e+00,
0.00000000e+00, 2.00000000e+00, 2.00000000e+00,
8.00000000e+00, 2.00000000e+01, 2.30000000e+01,
4.00000000e+01, 4.40000000e+01, 7.40000000e+01,
1.15000000e+02, 1.15000000e+02, 2.02000000e+02,
2.11000000e+02, 3.03000000e+02, 3.75000000e+02,
4.06000000e+02, 5.01000000e+02, 9.55000000e+02,
7.72000000e+02, 1.07900000e+03, 1.49600000e+03,
1.49000000e+03, 2.09000000e+03, 2.42400000e+03,
3.74500000e+03, 4.30100000e+03, 5.19900000e+03,
5.78600000e+03, 7.84700000e+03, 9.20700000e+03,
1.09750000e+04, 1.15800000e+04, 1.40270000e+04,
1.60310000e+04, 1.78510000e+04, 2.05030000e+04,
2.24030000e+04, 2.38810000e+04, 2.80760000e+04,
3.06100000e+04, 3.16830000e+04, 3.32470000e+04,
3.54650000e+04, 3.69270000e+04, 3.60900000e+04,
3.69160000e+04, 3.92520000e+04, 4.06440000e+04,
4.09700000e+04, 4.20300000e+04, 4.47540000e+04,
4.50200000e+04, 4.57400000e+04, 4.63050000e+04,
4.83510000e+04, 4.89270000e+04, 4.93230000e+04,
5.15830000e+04, 5.15660000e+04, 5.64750000e+04,
5.28090000e+04, 5.51650000e+04, 5.75620000e+04,
6.08190000e+04, 5.75390000e+04, 6.22030000e+04,
5.87710000e+04, 6.25720000e+04, 6.42370000e+04,
6.30010000e+04, 6.99250000e+04, 6.55500000e+04,
7.05670000e+04, 6.76280000e+04, 6.99720000e+04,
7.17520000e+04, 7.46450000e+04, 7.71470000e+04,
7.26860000e+04, 8.01400000e+04, 8.40170000e+04,
9.02200000e+04, 8.20140000e+04, 8.10290000e+04,
8.20620000e+04, 9.03880000e+04, 8.16390000e+04,
8.58950000e+04, 7.98530000e+04, 8.86300000e+04,
8.71840000e+04, 8.83770000e+04, 9.20710000e+04,
8.88260000e+04, 8.74430000e+04, 9.00380000e+04,
9.77430000e+04, 9.60420000e+04, 9.46750000e+04,
9.26630000e+04, 9.84670000e+04, 9.92980000e+04,
9.91450000e+04, 1.01297000e+05, 1.00390000e+05,
9.96340000e+04, 9.85920000e+04, 1.04676000e+05,
1.01076000e+05, 9.98130000e+04, 1.00646000e+05,
1.05021000e+05, 1.06148000e+05, 1.07011000e+05,
1.01672000e+05, 1.06052000e+05, 1.11228000e+05,
1.10152000e+05, 1.16759000e+05, 1.13659000e+05,
1.10595000e+05, 1.17773000e+05, 1.16542000e+05,
1.17367000e+05, 1.19706000e+05, 1.18726000e+05,
1.27547000e+05, 1.24525000e+05, 1.27783000e+05,
1.27164000e+05, 1.29067000e+05, 1.30606000e+05,
1.34356000e+05, 1.27868000e+05, 1.33751000e+05,
1.30818000e+05, 1.29190000e+05, 1.34615000e+05,
1.35682000e+05, 1.37817000e+05, 1.37868000e+05,
1.40049000e+05, 1.35609000e+05, 1.41496000e+05,
1.40195000e+05, 1.40963000e+05, 1.47890000e+05,
1.45144000e+05, 1.45046000e+05, 1.41335000e+05,
1.49306000e+05, 1.45800000e+05, 1.50357000e+05,
1.48214000e+05, 1.48282000e+05, 1.46862000e+05,
1.47772000e+05, 1.50258000e+05, 1.52567000e+05,
1.49298000e+05, 1.45587000e+05, 1.52834000e+05,
1.57252000e+05, 1.47753000e+05, 1.48100000e+05,
1.46865000e+05, 1.47667000e+05, 1.51644000e+05,
1.47683000e+05, 1.42934000e+05, 1.44297000e+05,
1.49313000e+05, 1.42347000e+05, 1.40920000e+05,
1.42415000e+05, 1.36767000e+05, 1.42052000e+05,
1.36464000e+05, 1.29370000e+05, 1.31893000e+05,
1.21650000e+05, 1.18360000e+05, 1.09731000e+05,
1.08481000e+05, 1.01120000e+05, 9.62350000e+04,
8.67030000e+04, 7.97880000e+04, 6.66930000e+04,
5.80460000e+04, 4.67410000e+04, 3.57320000e+04,
2.68750000e+04, 1.59710000e+04, 6.92000000e+03,
2.58900000e+03, 3.70400000e+03])
In [ ]:
Content source: patrick-s-h-lewis/CamSim
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