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import sys, os, time
from collections import deque
import argparse
import numpy as np
import imp


    

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SCRIPT_DIR = os.path.dirname(os.path.realpath(__file__))


    

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def import_anywhere(module_name, paths):
    """import methods from any folder"""
    try:
        f, filename, desc = imp.find_module(module_name, paths)
        return imp.load_module(module_name, f, filename, desc)
    finally:
        # Since we may exit via an exception, close fp explicitly.
        if f:
            f.close()


    

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utility_functions = import_anywhere('utility_functions', [SCRIPT_DIR])
from utility_functions import get_chisq_sensitivity


    

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parser = argparse.ArgumentParser(description="Get results based on the JS method.")
parser.add_argument("k", metavar="NUM_SNP", help="number of SNPs to output", type=int)
parser.add_argument("e", metavar="EPSILON", help="privacy budget epsilon", type=float)
parser.add_argument("n_case", help="number of cases", type=int)
parser.add_argument("n_control", help="number of controls", type=int)
parser.add_argument("infile", help="input file of chisquare statistics")
parser.add_argument("-s", help="sensitivity of the scoring function", default=1, type=int)
args = parser.parse_args()

if not os.path.isfile(args.infile):
    sys.exit("The follwoing file does not exist: {}".format(args.infile))


    

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name_score_tuples = []
with open(args.infile, 'r') as infile:
    # skip header line
    garbage = infile.readline()
    for line in infile:
        name, score = line.strip().split()
        name_score_tuples.append((name, float(score)))

indexed_snp_name_dict = dict(enumerate([name for name, ss in name_score_tuples]))
snp_scores =  np.array([ss for name, ss in name_score_tuples])


    

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loc_sig = import_anywhere('loc_sig', [SCRIPT_DIR])
from loc_sig import loc_sig


    

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sensitivity = get_chisq_sensitivity(args.n_case, args.n_control)
results_indices = loc_sig(args.e, args.k, sensitivity, snp_scores)
results_names = map(indexed_snp_name_dict.get, results_indices)


    

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for nn in results_names:
    print nn