http://www.deeplearningbook.org/
Udacity
Tensorflow Tutorial
ImageNet Competition Winners: LeNet-5, AlexNet, GoogleNet(Inception Model)
Tensorflow 0.8 (Both Python2/Python3, GPU supported) has been installed on atlas9. Currently, Tensorflow has GPU allocation problems. It can be solved by using ‘BFC’ (Best-fit with coalescing), or manually allocating GPUs. Also see comments.
http://yaroslavvb.blogspot.com/2011/09/notmnist-dataset.html
Simplified interface for TensorFlow (mimicking Scikit Learn) for Deep Learning. CNN example.
In [1]:
# These are all the modules we'll be using later. Make sure you can import them
# before proceeding further.
from __future__ import print_function
import numpy as np
import tensorflow as tf
from six.moves import cPickle as pickle
from six.moves import range
In [2]:
pickle_file = 'notMNIST.pickle'
with open(pickle_file, 'rb') as f:
save = pickle.load(f)
train_dataset = save['train_dataset']
train_labels = save['train_labels']
valid_dataset = save['valid_dataset']
valid_labels = save['valid_labels']
test_dataset = save['test_dataset']
test_labels = save['test_labels']
del save # hint to help gc free up memory
print('Training set', train_dataset.shape, train_labels.shape)
print('Validation set', valid_dataset.shape, valid_labels.shape)
print('Test set', test_dataset.shape, test_labels.shape)
In [3]:
image_size = 28
num_labels = 10
num_channels = 1 # grayscale
import numpy as np
def reformat(dataset, labels):
dataset = dataset.reshape(
(-1, image_size, image_size, num_channels)).astype(np.float32)
labels = (np.arange(num_labels) == labels[:,None]).astype(np.float32)
return dataset, labels
train_dataset, train_labels = reformat(train_dataset, train_labels)
valid_dataset, valid_labels = reformat(valid_dataset, valid_labels)
test_dataset, test_labels = reformat(test_dataset, test_labels)
print('Training set', train_dataset.shape, train_labels.shape)
print('Validation set', valid_dataset.shape, valid_labels.shape)
print('Test set', test_dataset.shape, test_labels.shape)
In [8]:
# Arithmetic Mean
# compute the accuracy of dataset
def accuracy(predictions, labels):
return (100.0 * np.sum(np.argmax(predictions, 1) == np.argmax(labels, 1))
/ predictions.shape[0])
In [5]:
batch_size = 16
patch_size = 5
kernel_size = 2
depth = 16 # the output of convnet
num_hidden = 64 # the number of hidden units in FC
graph = tf.Graph()
with graph.as_default():
# Input data.
tf_train_dataset = tf.placeholder(
tf.float32, shape=(batch_size, image_size, image_size, num_channels))
# convolution's input is a tensor of shape [batch,in_height,in_width,in_channels]
tf_train_labels = tf.placeholder(tf.float32, shape=(batch_size, num_labels))
tf_valid_dataset = tf.constant(valid_dataset)
tf_test_dataset = tf.constant(test_dataset)
# Variables.
layer1_weights = tf.Variable(tf.truncated_normal(
[patch_size, patch_size, num_channels, depth], stddev=0.1))
layer1_biases = tf.Variable(tf.zeros([depth]))
# convolution's weights are called filter in tensorflow
# it is a tensor of shape [kernel_hight,kernel_width,in_channels,out_channels]
layer2_weights = tf.Variable(tf.truncated_normal(
[patch_size, patch_size, depth, depth], stddev=0.1))
layer2_biases = tf.Variable(tf.constant(1.0, shape=[depth]))
layer3_weights = tf.Variable(tf.truncated_normal(
[image_size // 4 * image_size // 4 * depth, num_hidden], stddev=0.1))
layer3_biases = tf.Variable(tf.constant(1.0, shape=[num_hidden]))
layer4_weights = tf.Variable(tf.truncated_normal(
[num_hidden, num_labels], stddev=0.1))
layer4_biases = tf.Variable(tf.constant(1.0, shape=[num_labels]))
# Model.
def model(data):
conv = tf.nn.conv2d(data, layer1_weights, [1, 2, 2, 1], padding='SAME')
hidden = tf.nn.relu(conv + layer1_biases)
max_pool = tf.nn.max_pool(hidden,[1,kernel_size,kernel_size,1],[1,2,2,1],'SAME')
hidden = tf.nn.relu(max_pool+layer2_biases)
# 3D -> 2D
shape = hidden.get_shape().as_list()
reshape = tf.reshape(hidden, [shape[0], shape[1] * shape[2] * shape[3]])
hidden = tf.nn.relu(tf.matmul(reshape, layer3_weights) + layer3_biases)
return tf.matmul(hidden, layer4_weights) + layer4_biases
# Training computation.
# using logist regression as classifier instead of mean square error
logits = model(tf_train_dataset)
loss = tf.reduce_mean(
tf.nn.softmax_cross_entropy_with_logits(logits, tf_train_labels))
# Optimizer.
optimizer = tf.train.GradientDescentOptimizer(0.05).minimize(loss)
# Predictions for the training, validation, and test data.
train_prediction = tf.nn.softmax(logits)
valid_prediction = tf.nn.softmax(model(tf_valid_dataset))
test_prediction = tf.nn.softmax(model(tf_test_dataset))
In [6]:
num_steps = 5000
'''
# use GPU0
# allocate CPU
config = tf.ConfigProto()
config.gpu_options.allocator_type = 'BFC'
config.gpu_options.allow_growth = True
config.log_device_placement = True
with tf.Session(graph=graph,config=config) as session:
'''
# use CPU0
with tf.Session(graph=graph) as session:
tf.initialize_all_variables().run()
print('Initialized')
for step in range(num_steps):
offset = (step * batch_size) % (train_labels.shape[0] - batch_size)
batch_data = train_dataset[offset:(offset + batch_size), :, :, :]
batch_labels = train_labels[offset:(offset + batch_size), :]
feed_dict = {tf_train_dataset : batch_data, tf_train_labels : batch_labels}
_, l, predictions = session.run(
[optimizer, loss, train_prediction], feed_dict=feed_dict)
if (step % 500 == 0):
print('Minibatch loss at step %d: %f' % (step, l))
print('Minibatch accuracy: %.1f%%' % accuracy(predictions, batch_labels))
print('Validation accuracy: %.1f%%' % accuracy(
valid_prediction.eval(), valid_labels))
print('--------------------------------------')
print('Test accuracy: %.1f%%' % accuracy(test_prediction.eval(), test_labels))
In [1]:
'''
LeNet-5 (Tensorflow, CPU)
Zhiang Chen
6/2016
zxc251@case.edu
'''
import time
start_time = time.time()
batch_size = 16
patch_size = 5
kernel_size = 2
depth1 = 6 #the depth of 1st convnet
depth2 = 16 #the depth of 2nd convnet
C5_units = 120
F6_units = 84
F7_units = 10
graph = tf.Graph()
with graph.as_default():
# Input data
tf_train_dataset = tf.placeholder(tf.float32, shape=(batch_size, image_size, image_size, num_channels))
# convolution's input is a tensor of shape [batch,in_height,in_width,in_channels]
tf_train_labels = tf.placeholder(tf.float32, shape=(batch_size, num_labels))
tf_valid_dataset = tf.constant(valid_dataset)
tf_test_dataset = tf.constant(test_dataset)
# Variables(weights and biases)
C1_weights = tf.Variable(tf.truncated_normal([patch_size, patch_size, num_channels, depth1], stddev=0.1))
# convolution's weights are called filter in tensorflow
# it is a tensor of shape [kernel_hight,kernel_width,in_channels,out_channels]
C1_biases = tf.Variable(tf.zeros([depth1]))
# S1_weights # Sub-sampling doesn't need weights and biases
# S1_biases
C3_weights = tf.Variable(tf.truncated_normal([patch_size, patch_size, depth1, depth2], stddev=0.1))
C3_biases = tf.Variable(tf.constant(1.0, shape=[depth2]))
# S4_weights
# S4_biases
# C5 actually is a fully-connected layer
C5_weights = tf.Variable(tf.truncated_normal([5 * 5 * depth2, C5_units], stddev=0.1))
C5_biases = tf.Variable(tf.constant(1.0, shape=[C5_units]))
F6_weights = tf.Variable(tf.truncated_normal([C5_units,F6_units], stddev=0.1))
F6_biases = tf.Variable(tf.constant(1.0, shape=[F6_units]))
# FC and logistic regression replace RBF
F7_weights = tf.Variable(tf.truncated_normal([F6_units,F7_units], stddev=0.1))
F7_biases = tf.Variable(tf.constant(1.0, shape=[F7_units]))
# Model
def model(data):
conv = tf.nn.conv2d(data, C1_weights, [1, 1, 1, 1], padding='SAME')
hidden = tf.nn.relu(conv + C1_biases) # relu is better than tanh
max_pool = tf.nn.max_pool(hidden,[1,kernel_size,kernel_size,1],[1,2,2,1],'VALID')
hidden = tf.nn.relu(max_pool)
conv = tf.nn.conv2d(hidden, C3_weights, [1, 1, 1, 1], padding='VALID')
hidden = tf.nn.relu(conv + C3_biases)
max_pool = tf.nn.max_pool(hidden,[1,kernel_size,kernel_size,1],[1,2,2,1],'VALID')
hidden = tf.nn.relu(max_pool)
shape = hidden.get_shape().as_list()
reshape = tf.reshape(hidden, [shape[0], shape[1] * shape[2] * shape[3]])
hidden = tf.nn.relu(tf.matmul(reshape, C5_weights) + C5_biases)
fc = tf.matmul(hidden,F6_weights)
hidden = tf.nn.relu(fc + F6_biases)
fc = tf.matmul(hidden,F7_weights)
output = fc + F7_biases
return output
# Training computation.
tf_train_dataset = tf.nn.dropout(tf_train_dataset,0.8) # input dropout
logits = model(tf_train_dataset)
loss = tf.reduce_mean(tf.nn.softmax_cross_entropy_with_logits(logits, tf_train_labels))
# Optimizer.
optimizer = tf.train.GradientDescentOptimizer(0.05).minimize(loss)
# Predictions for the training, validation, and test data.
train_prediction = tf.nn.softmax(logits)
valid_prediction = tf.nn.softmax(model(tf_valid_dataset))
test_prediction = tf.nn.softmax(model(tf_test_dataset))