Notebooks on Computational Biology Data

• Hierarchical James Hensman, Magnus Rattray and Neil Lawrence. Work funded by the Iterative Project.
• Checking Replicate Time Series Quality with GPy Marta Milo and Neil Lawrence
• Visualizing Single Cell Data with the GP-LVM Max Zwiessele, Oliver Stegle and Neil Lawrence. Work funded by the BioPreDyn Project and is an ongoing collaboration with Florian Buettner.
• Spatio-temporal Model of Gene Expression in Drosophila Blastoderm Development Mu Niu, Nicolas Durrande and Neil Lawrence. Work funded by the BioPreDyn Project. Ongoing collaboration with Johannes Jaeger's group.
• Inferring Transcription Factor Activities by Combining Binding Information with Gene Expression Profiles M. Arif Rahman and Neil D. Lawrence. This work is funded by a Commonwealth Scholarship to Arif Rahman and by the EU FP7 RADIANT project.
• tSNE PCA vs (Bayesian)-GPLVM tSNE comparison to GPLVM and BGPLVM based on tweet https://twitter.com/mikelove/status/738021869341839360, showing 'artificial' structure introduced by tSNE into data.

modified 30th March 2015 with Sura Al-Zaki