This notebook was created by Svitozar Serkez. Source and license info is on GitHub. August 2016.
In [1]:
# the output of plotting commands is displayed inline within frontends,
# directly below the code cell that produced it
%matplotlib inline
from __future__ import print_function
# this python library provides generic shallow (copy) and deep copy (deepcopy) operations
from copy import deepcopy
# import from Ocelot graphical modules
import sys, os
from ocelot import *
from ocelot.utils.xfel_utils import *
from ocelot.gui.accelerator import *
from ocelot.gui.genesis_plot import *
#from ocelot.optics.elements import Filter_freq
import numpy as np
from copy import copy
#import matplotlib.pyplot as plt
# load beam distribution
initializing ocelot...
In [2]:
E_beam=8.5 #[GeV]
E_photon=250 #[eV]
In [3]:
# defining the undulator
lperiod=0.068
nperiods=73
und = Undulator(lperiod=lperiod, nperiods=nperiods, Kx=1.0);
und.Kx = Ephoton2K(E_photon, und.lperiod, E_beam)
# defining of the drifts
d2 = Drift (l=4*und.lperiod)
d3 = Drift (l=7*und.lperiod)
# defining of the quads
qf = Quadrupole (l=6*und.lperiod, k1=-7.3)
qd = Quadrupole (l=6*und.lperiod, k1=7.3)
qdh=deepcopy(qd)
qdh.l/=2
# creating of the cell
extra_fodo = (und, d2, qdh)
cell_ps = (und, d2, qf, d3, und, d2, qd, d3)
l_fodo= MagneticLattice(cell_ps).totalLen/2
sase3 = MagneticLattice((und, d2, qd, d3) + 11*cell_ps)
up = UndulatorParameters(und,E_beam)
up.printParameters()
Undulator parameters:
('L=', 4.964)
('gamma(electron)=', 16634.085776399123)
('K=', 8.8723675084034621)
('B[T]=', 1.397364688791348)
('test', 250.00000000000003)
Radiation parameters:
('w1(first harmonic, zero angle)=', 3.7981687858557933e+17, 'Hz/2pi', 250.00000000000003, '[eV]', 4.959367720369577e-09, 'm')
('Total energy loss [Gev]', 0.00044305322825621829)
In [5]:
beamf = read_beam_file('beam.dat')
['ZPOS', 'GAMMA0', 'DELGAM', 'EMITX', 'EMITY', 'BETAX', 'BETAY', 'XBEAM', 'YBEAM', 'PXBEAM', 'PYBEAM', 'ALPHAX', 'ALPHAY', 'CURPEAK', 'ELOSS']
In [7]:
fig=plt.figure()
fig.set_size_inches((20,15))
plot_beam(fig, beamf)
In [8]:
beta_av = 20.0
beam=get_beam_peak(beamf)
beam.E=E_beam
rematch(beta_av, l_fodo, qdh, sase3, extra_fodo, beam, qf, qd)
beamf = transform_beam_file(beamf ,transform = [ [beam.beta_x,beam.alpha_x], [beam.beta_y,beam.alpha_y] ], energy_new = beam.E, emit_scale = 1.0)
beamf = cut_beam(beamf,[-2e-6, 2e-6])
fig=plt.figure()
fig.set_size_inches((20,15))
plot_beam(fig, beamf)
********* calculating fodo parameters *********
fodo parameters:
('k*l=', array([ 0.05283898, 0.15461945]))
('f=', 18.925420799442076, 6.4674915975241269)
('kap1=', 3.0923890195166788)
('kap2=', 1.0567796727980598)
('betaMax=', array([ 26.4674916, 38.9254208]))
('betaMin=', array([ 13.5325084, 1.0745792]))
('betaMean=', array([ 20., 20.]))
********* *********
before rematching k=-7.300000 7.300000 beta=29.813443 19.628544 alpha=1.244151 -0.831963
after rematching k=0.259015 -0.259015 beta=24.470237 14.252958 alpha=1.325022 -0.880831
matching to slice 999
transforming
In [9]:
def f1(n, n0, a0, a1, a2):
'''
piecewise-quadratic tapering function
'''
for i in xrange(1,len(n0)):
if n < n0[i]:
return a0 + (n-n0[i-1])*a1[i-1] + (n-n0[i-1])**2 * a2[i-1]
a0 += (n0[i]-n0[i-1])*a1[i-1] + (n0[i]-n0[i-1])**2 * a2[i-1]
return 1.0
tap_start=3 #number of undulators
lin_tap=0.01 #taper step
quad_tap=0.0
n = 60
n0 = [0,tap_start,60]
a0 = und.Kx
a1 = [0,lin_tap*a0]
a2 = [0,quad_tap]
taper_func1 = lambda n : f1(n, n0, a0, a1, a2)
sase3= taper(sase3, taper_func1)
In [14]:
run_dir = 'gen_stst' #directory to dump data
run_id=0 # run number (subdirectory 'run_#') for statistical studies
try:
os.makedirs(run_dir)
except:
pass
launcher = get_genesis_launcher('genesis') # launcher object to start genesis
In [15]:
inp = generate_input(up, beam, itdp=False)
inp.lattice_str = generate_lattice(sase3, unit = up.lw, energy = beam.E) #generate Genesis lattice based on Ocelot lattice object
inp.beam_file_str = beam_file_str(beamf)
#inp.beamfile = 'tmp.beam'
inp.runid = run_id
inp.run_dir = run_dir
inp.ipseed = 17111+7*run_id # defines shot-noise, changes automatically
# below other Genesis parameters may be specified, like prad0, dgrid, etc.....
******** FEL Parameters ********
ex= 1.38895798733e-07
ey= 2.13452762304e-07
rxbeam= 1.11421096629e-05 [m]
rybeam= 1.05416158084e-05 [m]
rel energy spread deta= 0.000162368283071 [m]
xlamd= 0.068
aw0= 6.27371123037
gamma0= 16634.1159848
Ip= 4445.33915304 beam peak current [A]
lambda0= 4.95934970746e-09
Pb= 3.77854513472e+13 beam power [W]
N= 153100.938649
rho= 0.00413668812369
power= 2577.28852613 equivalent shot noise power [W]
coupling parameter fc= 0.712953317588
gain length estimate lg= 0.755241144761
Rayleigh length estimate zr= 0.297846800745
Ming Xie gain reduction estimates:
diffraction parameter etad= 2.53566982379
energy spread parameter etad= 0.0226614550422
gain length degradation lscale= 0.766336177728
**************************************
generating lattice file...
now all the genesis input files are created, such as lattice file, beam file, input file.
In [16]:
print(inp.input())
$newrun
aw0 = 6.27371123037
xkx = 0
xky = 1
wcoefz = 0 0 0
xlamd = 0.068
fbess0 = 0.712953317588
delaw = 0
iertyp = 0
iwityp = 0
awd = 6.27371123037
awx = 0
awy = 0
iseed = -1
npart = 2048
gamma0 = 16634.1159848
delgam = 2.70085285285
rxbeam = 1.11421096629e-05
rybeam = 1.05416158084e-05
alphax = 1.32502206016
alphay = -0.880831166291
emitx = 1.38895798733e-07
emity = 2.13452762304e-07
xbeam = 0.0
ybeam = 0.0
pxbeam = 0.0
pybeam = 0.0
conditx = 0.0
condity = 0.0
bunch = 0.0
bunchphase = 0.0
emod = 0.0
emodphase = 0.0
xlamds = 4.95934970746e-09
prad0 = 0
zrayl = 0.297846800745
zwaist = 2
ncar = 151
lbc = 0
rmax0 = 9.0
dgrid = 0.0
nscr = 0
nscz = 0
nptr = 40
nwig = 98
zsep = 20
delz = 4.0
nsec = 1
iorb = 0
zstop = 256.0
magin = 1
magout = 0
quadf = 0
quadd = 0
fl = 0
dl = 0
drl = 0
f1st = 0
qfdx = 0
qfdy = 0
solen = 0
sl = 0
ildgam = 5
ildpsi = 7
ildx = 1
ildy = 2
ildpx = 3
ildpy = 4
itgaus = 1
nbins = 4
igamgaus = 1
lout = 1 1 1 1 1 0 1 1 1 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0
iphsty = 1
ishsty = 1
ippart = 0
ispart = 0
ipradi = 0
isradi = 0
idump = 0
iotail = 1
nharm = 1
curpeak = 4445.33915304
curlen = 7e-06
ntail = -500
nslice = 1000
itdp = 0
isntyp = 0
iall = 0
itdp = 0
ipseed = 17111
iscan = 0
nscan = 3
svar = 0.01
isravg = 1
isrsig = 1
cuttail = -1.0
eloss = 0
version = 0.1
ndcut = -1
idmpfld = 0
idmppar = 0
ilog = 0
ffspec = 0
convharm = 1
ibfield = 0.0
imagl = 0.0
idril = 0.0
alignradf = 1
offsetradf = 0
multconv = 0
outputfile ='run.0.gout'
maginfile ='lattice.inp'
filetype ='ORIGINAL'
$end
In [17]:
print(inp.lattice_str)
# header is included
? VERSION= 1.00 including new format
? UNITLENGTH= 0.068 :unit length in header
AW 6.27371123037 73.0 0.0
AW 6.27371123037 73.0 17.0
AW 6.27371123037 73.0 17.0
AW 6.33644834267 73.0 17.0
AW 6.39918545498 73.0 17.0
AW 6.46192256728 73.0 17.0
AW 6.52465967959 73.0 17.0
AW 6.58739679189 73.0 17.0
AW 6.65013390419 73.0 17.0
AW 6.7128710165 73.0 17.0
AW 6.7756081288 73.0 17.0
AW 6.8383452411 73.0 17.0
AW 6.90108235341 73.0 17.0
AW 6.96381946571 73.0 17.0
AW 7.02655657802 73.0 17.0
AW 7.08929369032 73.0 17.0
AW 7.15203080262 73.0 17.0
AW 7.21476791493 73.0 17.0
AW 7.27750502723 73.0 17.0
AW 7.34024213953 73.0 17.0
AW 7.40297925184 73.0 17.0
AW 7.46571636414 73.0 17.0
AW 7.52845347645 73.0 17.0
AD 6.27371123037 17.0 73.0
AD 6.27371123037 17.0 73.0
AD 6.33644834267 17.0 73.0
AD 6.39918545498 17.0 73.0
AD 6.46192256728 17.0 73.0
AD 6.52465967959 17.0 73.0
AD 6.58739679189 17.0 73.0
AD 6.65013390419 17.0 73.0
AD 6.7128710165 17.0 73.0
AD 6.7756081288 17.0 73.0
AD 6.8383452411 17.0 73.0
AD 6.90108235341 17.0 73.0
AD 6.96381946571 17.0 73.0
AD 7.02655657802 17.0 73.0
AD 7.08929369032 17.0 73.0
AD 7.15203080262 17.0 73.0
AD 7.21476791493 17.0 73.0
AD 7.27750502723 17.0 73.0
AD 7.34024213953 17.0 73.0
AD 7.40297925184 17.0 73.0
AD 7.46571636414 17.0 73.0
AD 7.52845347645 17.0 73.0
QF -7.3438282371 6.0 77.0
QF 7.3438282371 6.0 84.0
QF -7.3438282371 6.0 84.0
QF 7.3438282371 6.0 84.0
QF -7.3438282371 6.0 84.0
QF 7.3438282371 6.0 84.0
QF -7.3438282371 6.0 84.0
QF 7.3438282371 6.0 84.0
QF -7.3438282371 6.0 84.0
QF 7.3438282371 6.0 84.0
QF -7.3438282371 6.0 84.0
QF 7.3438282371 6.0 84.0
QF -7.3438282371 6.0 84.0
QF 7.3438282371 6.0 84.0
QF -7.3438282371 6.0 84.0
QF 7.3438282371 6.0 84.0
QF -7.3438282371 6.0 84.0
QF 7.3438282371 6.0 84.0
QF -7.3438282371 6.0 84.0
QF 7.3438282371 6.0 84.0
QF -7.3438282371 6.0 84.0
QF 7.3438282371 6.0 84.0
QF -7.3438282371 6.0 84.0
In [18]:
print(inp.beam_file_str)
#
? VERSION = 1.0
? SIZE =521
? COLUMNS ZPOS GAMMA0 DELGAM EMITX EMITY BETAX BETAY XBEAM YBEAM PXBEAM PYBEAM ALPHAX ALPHAY CURPEAK ELOSS
-1.99578155155e-06 16636.8491332 1.86806646647 8.28193026263e-08 7.92424918988e-08 4.80748057486 3.80534285333 0.0 0.0 0.0 0.0 0.599355677268 0.712462798687 442.445184853 -28725.103293
-1.98809868869e-06 16636.8268689 1.86816506507 8.28118000853e-08 7.9281606531e-08 4.80025726799 3.80890738489 0.0 0.0 0.0 0.0 0.599792994783 0.71370350518 441.588856421 -28709.097391
-1.98041582583e-06 16636.8061321 1.83201981982 8.28122996212e-08 7.93198709845e-08 4.79181451684 3.81410553011 0.0 0.0 0.0 0.0 0.600111350976 0.715128676868 440.747637886 -28693.811591
-1.97273296296e-06 16636.7612831 1.89664444444 8.28251950231e-08 7.93520875772e-08 4.78298211531 3.82083584465 0.0 0.0 0.0 0.0 0.600517671324 0.71686418496 440.181218364 -28680.2052469
-1.9650501001e-06 16636.7647844 1.85702582583 8.28515996559e-08 7.93756996924e-08 4.77444896891 3.82896850927 0.0 0.0 0.0 0.0 0.601054693132 0.718934874804 439.967002789 -28668.1001577
-1.95736723724e-06 16636.7483645 1.86155975976 8.28872664019e-08 7.93918847538e-08 4.76651939666 3.83811519015 0.0 0.0 0.0 0.0 0.601660559938 0.721276033425 439.829129875 -28658.4091289
-1.94968437437e-06 16636.7246685 1.87150880881 8.29220801786e-08 7.94047926524e-08 4.75916026699 3.8481263806 0.0 0.0 0.0 0.0 0.602403175093 0.723879798273 440.671519844 -28651.4039871
-1.94200151151e-06 16636.7112544 1.87304284284 8.2956893151e-08 7.94216966739e-08 4.7524359789 3.85822191896 0.0 0.0 0.0 0.0 0.603209011644 0.726594142735 441.513834285 -28647.5007676
-1.93431864865e-06 16636.6990682 1.86482972973 8.29976057639e-08 7.94418049028e-08 4.7459407646 3.86836184788 0.0 0.0 0.0 0.0 0.604090142678 0.729324200863 443.207359892 -28646.9003866
-1.92663578579e-06 16636.6507064 1.85527197197 8.3030375322e-08 7.94696790087e-08 4.73919987419 3.8783353931 0.0 0.0 0.0 0.0 0.605039099788 0.732075426155 445.25345913 -28649.0983448
-1.91895292292e-06 16636.6382233 1.88051421421 8.30525915509e-08 7.95004882779e-08 4.73216672431 3.88835039864 0.0 0.0 0.0 0.0 0.605995408563 0.734831198835 447.674078975 -28654.6978687
-1.91127006006e-06 16636.60175 1.82969309309 8.30620999257e-08 7.95326997482e-08 4.72516269911 3.89833643115 0.0 0.0 0.0 0.0 0.607013420705 0.737457087752 450.822975382 -28662.2999406
-1.9035871972e-06 16636.5867332 1.86025565566 8.30667956012e-08 7.95578764149e-08 4.71783690682 3.90801544271 0.0 0.0 0.0 0.0 0.608076847688 0.739864446218 453.968053735 -28672.9899857
-1.89590433433e-06 16636.5645093 1.89921611612 8.30697983069e-08 7.95797876404e-08 4.71073034828 3.91697945652 0.0 0.0 0.0 0.0 0.609215806605 0.741867215671 457.888787684 -28684.7933405
-1.88822147147e-06 16636.5289336 1.88808198198 8.30757988504e-08 7.95967967428e-08 4.70375383424 3.92485526292 0.0 0.0 0.0 0.0 0.610531807194 0.74341967968 461.834244338 -28698.7973176
-1.88053860861e-06 16636.5123486 1.8577981982 8.30728969241e-08 7.96133032206e-08 4.69734310817 3.93168678173 0.0 0.0 0.0 0.0 0.612070903413 0.744662429195 466.005781459 -28713.2028045
-1.87285574575e-06 16636.458052 1.85403693694 8.30559127019e-08 7.96310867004e-08 4.69101657126 3.93764425684 0.0 0.0 0.0 0.0 0.613861489074 0.745656067203 470.320772968 -28728.6884188
-1.86517288288e-06 16636.4482911 1.8767963964 8.30322088964e-08 7.96456945195e-08 4.68382314624 3.94241223332 0.0 0.0 0.0 0.0 0.61571874785 0.746482214087 474.632382132 -28744.2941441
-1.85749002002e-06 16636.4238726 1.88838998999 8.30054000699e-08 7.96544999771e-08 4.67542226737 3.9458170136 0.0 0.0 0.0 0.0 0.61755409479 0.747190038265 478.913988843 -28759.1999612
-1.84980715716e-06 16636.3945626 1.89048958959 8.29845194518e-08 7.96576970217e-08 4.6664805074 3.94809554463 0.0 0.0 0.0 0.0 0.619313264698 0.747890904543 483.191015632 -28773.8863186
-1.84212429429e-06 16636.361523 1.88522132132 8.29619126369e-08 7.96641963655e-08 4.65771719742 3.94982097592 0.0 0.0 0.0 0.0 0.621139496728 0.748694156326 487.189765066 -28786.7927869
-1.83444143143e-06 16636.3124926 1.87035825826 8.29369046596e-08 7.96800970365e-08 4.64984323107 3.95124761158 0.0 0.0 0.0 0.0 0.623183522781 0.749745307861 491.144263223 -28798.9977261
-1.82675856857e-06 16636.2997049 1.86484174174 8.29058927405e-08 7.97083072781e-08 4.64304983697 3.95207954618 0.0 0.0 0.0 0.0 0.625509809786 0.750938966326 494.889657639 -28809.7018056
-1.81907570571e-06 16636.2583624 1.86957627628 8.28669289366e-08 7.97473709892e-08 4.63736583438 3.95237259909 0.0 0.0 0.0 0.0 0.627992048532 0.752266606067 498.41937864 -28819.3928029
-1.81139284284e-06 16636.2437271 1.86286886887 8.28233161391e-08 7.97929831206e-08 4.63259492019 3.95215657738 0.0 0.0 0.0 0.0 0.630518690365 0.753609139983 501.900711837 -28827.7968906
-1.80370997998e-06 16636.2219417 1.86295595596 8.27740999026e-08 7.9844600132e-08 4.6283599886 3.95119674125 0.0 0.0 0.0 0.0 0.632985365284 0.754906786955 505.035008154 -28835.1000156
-1.79602711712e-06 16636.1896353 1.8792036036 8.27367346138e-08 7.9895253077e-08 4.62479842616 3.94969044487 0.0 0.0 0.0 0.0 0.635548266808 0.756253596003 508.164101325 -28841.094447
-1.78834425425e-06 16636.1713786 1.89573913914 8.27180103587e-08 7.99428736325e-08 4.62153755346 3.94755989646 0.0 0.0 0.0 0.0 0.638211646169 0.757620566487 511.075388036 -28846.1971749
-1.78066139139e-06 16636.1196193 1.8384008008 8.27121010689e-08 7.99807931336e-08 4.61826882136 3.94485338254 0.0 0.0 0.0 0.0 0.640920564296 0.759045946755 513.916485475 -28850.5992028
-1.77297852853e-06 16636.114346 1.84494714715 8.27067006123e-08 8.00169058361e-08 4.61543970627 3.94169773188 0.0 0.0 0.0 0.0 0.643654686598 0.760520906376 516.701516067 -28854.2006315
-1.76529566567e-06 16636.0938574 1.83850540541 8.27098976424e-08 8.00473775289e-08 4.61328153917 3.93846669068 0.0 0.0 0.0 0.0 0.646486651233 0.762043942615 519.396012965 -28857.4975687
-1.7576128028e-06 16636.06771 1.85152342342 8.27269937594e-08 8.00787885406e-08 4.61252656409 3.93553877944 0.0 0.0 0.0 0.0 0.649581911244 0.763650495503 522.094015734 -28860.3989416
-1.74992993994e-06 16636.0355846 1.87501201201 8.27589002835e-08 8.01110002952e-08 4.61298379168 3.93288601804 0.0 0.0 0.0 0.0 0.652901072674 0.765551856605 524.792021064 -28863.2000219
-1.74224707708e-06 16635.9931475 1.87144034034 8.27951665933e-08 8.01487652128e-08 4.61492605154 3.93019870436 0.0 0.0 0.0 0.0 0.656479091744 0.767739244706 527.486517961 -28865.9974232
-1.73456421421e-06 16635.9823897 1.86801341341 8.28261829895e-08 8.01929757463e-08 4.61792598346 3.92741401365 0.0 0.0 0.0 0.0 0.660251652569 0.770226789971 530.238490455 -28868.7984636
-1.72688135135e-06 16635.9391793 1.84601081081 8.28451966568e-08 8.02527894778e-08 4.62155651871 3.92426514432 0.0 0.0 0.0 0.0 0.664113748606 0.773008144479 533.018511015 -28871.6994897
-1.71919848849e-06 16635.9267293 1.86955585586 8.285900114e-08 8.03249163731e-08 4.62495556497 3.92049283926 0.0 0.0 0.0 0.0 0.667917648509 0.776054287 535.835571387 -28874.6006486
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1.4691895996e-06 16625.0936397 1.99804324324 2.28691092853e-07 7.95552152392e-08 6.73261574306 5.63382454388 0.0 0.0 0.0 0.0 0.293598024108 -0.390588488206 226.779954277 -1957.71024295
1.47687246246e-06 16625.0839132 2.02064534535 2.26730923101e-07 7.92308182625e-08 6.85960911342 5.72390732264 0.0 0.0 0.0 0.0 0.290018725424 -0.398584608492 227.659137447 -1953.06455781
1.48455532533e-06 16625.0722383 2.03858358358 2.24589303187e-07 7.88748166298e-08 6.98663735664 5.81503404838 0.0 0.0 0.0 0.0 0.286026085217 -0.406794186335 228.556454013 -1948.47279385
1.49223818819e-06 16625.0270757 2.02261911912 2.22282544015e-07 7.84922902131e-08 7.11419814526 5.9071738678 0.0 0.0 0.0 0.0 0.281753351232 -0.415208636625 229.464785791 -1943.85108992
1.49992105105e-06 16625.0285422 2.04756156156 2.1983085575e-07 7.80892694416e-08 7.242529742 6.0001574625 0.0 0.0 0.0 0.0 0.277199076996 -0.423865601184 230.363952659 -1939.13549272
1.50760391391e-06 16625.0296573 2.00602252252 2.17248046129e-07 7.76660352895e-08 7.37200395475 6.09329578948 0.0 0.0 0.0 0.0 0.272360066944 -0.432731676004 231.239306598 -1934.30382758
1.51528677678e-06 16625.0051492 2.00508108108 2.14543134843e-07 7.722658437e-08 7.50263197266 6.18694899716 0.0 0.0 0.0 0.0 0.267155467425 -0.441807597782 232.114632771 -1929.26211524
1.52296963964e-06 16624.9779715 2.0211963964 2.11738131569e-07 7.67613218234e-08 7.63468960916 6.28098484307 0.0 0.0 0.0 0.0 0.261622451107 -0.451135916586 232.920962181 -1924.01024634
1.5306525025e-06 16624.972598 2.00715535536 2.08867801081e-07 7.62643849487e-08 7.76823142216 6.37521275784 0.0 0.0 0.0 0.0 0.255847368233 -0.460799113089 233.716223926 -1918.46541107
1.53833536537e-06 16624.9736384 1.9881006006 2.05947761523e-07 7.57363185708e-08 7.90459416926 6.46935120103 0.0 0.0 0.0 0.0 0.249910097568 -0.470834575398 234.462549813 -1912.63351822
1.54601822823e-06 16624.9761757 1.96427927928 2.02997680333e-07 7.5177128961e-08 8.04356365919 6.5632808539 0.0 0.0 0.0 0.0 0.243839537644 -0.481200619071 235.160838972 -1906.54140496
1.55370109109e-06 16624.977464 1.98516466466 2.00023448871e-07 7.45956742503e-08 8.18475081611 6.65767371977 0.0 0.0 0.0 0.0 0.237662604984 -0.49188364715 235.846205265 -1900.11744919
1.56138395395e-06 16624.9784789 1.98037637638 1.97032353864e-07 7.39856800624e-08 8.3280270004 6.75263913493 0.0 0.0 0.0 0.0 0.231414682128 -0.50298319945 236.453522142 -1893.47522731
1.56906681682e-06 16624.9799277 1.97844354354 1.94012251306e-07 7.33432661771e-08 8.4732571086 6.84820949696 0.0 0.0 0.0 0.0 0.225072209748 -0.514500165412 237.060748412 -1886.49289305
1.57674967968e-06 16624.9819575 2.00387057057 1.90960127252e-07 7.26808276193e-08 8.62151058267 6.94503842109 0.0 0.0 0.0 0.0 0.21874601862 -0.526429015039 237.601977436 -1879.37029696
1.58443254254e-06 16624.9839873 2.01106366366 1.87862007227e-07 7.19879725288e-08 8.77214650168 7.04266666607 0.0 0.0 0.0 0.0 0.212454231067 -0.538805933678 238.122494755 -1871.8772732
1.59211540541e-06 16624.9860171 1.98122432432 1.84713882707e-07 7.1263033555e-08 8.92598983034 7.14212936238 0.0 0.0 0.0 0.0 0.206220441455 -0.551644229121 238.606710445 -1864.28454075
1.59979826827e-06 16624.9876215 1.99594954955 1.81513721329e-07 7.05034712114e-08 9.08340027414 7.24345522804 0.0 0.0 0.0 0.0 0.200127324967 -0.564952386567 239.036903041 -1856.25181065
1.60748113113e-06 16624.9891438 1.99678848849 1.78274738995e-07 6.97108150274e-08 9.24553763479 7.34667308384 0.0 0.0 0.0 0.0 0.194418166802 -0.578774623915 239.461509848 -1848.16933019
1.61516399399e-06 16624.9911182 1.98218228228 1.74983572885e-07 6.88822477571e-08 9.41352138949 7.45162711621 0.0 0.0 0.0 0.0 0.189204557123 -0.592991933519 239.746777121 -1839.17703047
1.62284685686e-06 16624.9936555 1.96485635636 1.71638368577e-07 6.80177536855e-08 9.58865596779 7.55843039971 0.0 0.0 0.0 0.0 0.184635082063 -0.607552825343 240.032882951 -1830.01374885
1.63052971972e-06 16624.9971821 1.9529995996 1.68252123535e-07 6.71134329913e-08 9.77239096204 7.66759017392 0.0 0.0 0.0 0.0 0.180961726181 -0.622368044336 240.144995913 -1819.75037444
1.63821258258e-06 16625.0184947 1.99094654655 1.64856278518e-07 6.61687120819e-08 9.96728592172 7.77934455385 0.0 0.0 0.0 0.0 0.178487787929 -0.637419282342 240.170974922 -1809.09029179
1.64589544545e-06 16625.0506704 1.96483693694 1.61433029386e-07 6.51866821883e-08 10.1759672724 7.89360501338 0.0 0.0 0.0 0.0 0.177455767507 -0.652684501419 240.072058711 -1797.06712835
1.65357830831e-06 16625.0642432 1.91777287287 1.57992757517e-07 6.41690240831e-08 10.3987422537 8.01067035439 0.0 0.0 0.0 0.0 0.177994203864 -0.66801280082 239.678086787 -1784.26281949
1.66126117117e-06 16625.067523 1.92158198198 1.54527981584e-07 6.31148114669e-08 10.636400027 8.1306678135 0.0 0.0 0.0 0.0 0.180277951927 -0.683268116366 239.283453496 -1769.87653253
1.66894403403e-06 16625.0710751 1.96822752753 1.51031714981e-07 6.20260454892e-08 10.8906725171 8.25532907181 0.0 0.0 0.0 0.0 0.184516184204 -0.698447615357 238.312754291 -1754.01232034
1.6766268969e-06 16625.075918 1.95165685686 1.47521417811e-07 6.09042531015e-08 11.161963802 8.38442980133 0.0 0.0 0.0 0.0 0.190903888156 -0.713440771901 237.298409707 -1736.19719613
1.68430975976e-06 16625.0977382 1.90292762763 1.43990110423e-07 5.97549359391e-08 11.450499046 8.51836084426 0.0 0.0 0.0 0.0 0.199538759044 -0.728179440105 235.818046296 -1716.24062406
1.69199262262e-06 16625.1328673 1.94166686687 1.40430418153e-07 5.85866218602e-08 11.7555541965 8.65747221298 0.0 0.0 0.0 0.0 0.210429892399 -0.742474988835 233.977767117 -1694.41096173
1.69967548549e-06 16625.1489287 1.9182004004 1.36841109125e-07 5.74023958701e-08 12.0775763801 8.80283330806 0.0 0.0 0.0 0.0 0.223843156669 -0.756323853503 231.941196817 -1669.49464278
1.70735834835e-06 16625.155018 1.8979015015 1.33224777438e-07 5.62069569953e-08 12.4163163388 8.95463651509 0.0 0.0 0.0 0.0 0.239740828795 -0.769739087907 229.102610337 -1642.79573992
1.71504121121e-06 16625.1632769 1.91744064064 1.29599147531e-07 5.50017786627e-08 12.7718999449 9.11215706959 0.0 0.0 0.0 0.0 0.258189584763 -0.782657048656 226.266244652 -1612.40476657
1.72272407407e-06 16625.1803058 1.92782222222 1.25947816358e-07 5.37921330247e-08 13.1457939848 9.27657796633 0.0 0.0 0.0 0.0 0.279236868029 -0.795103023825 222.51489429 -1580.60452932
1.73040693694e-06 16625.2315577 1.89196486486 1.22278462932e-07 5.25858809169e-08 13.5366729821 9.44714658213 0.0 0.0 0.0 0.0 0.302860779711 -0.806967508107 218.573571415 -1544.70431424
1.7380897998e-06 16625.2452313 1.89182872873 1.1859209606e-07 5.1383331336e-08 13.9435330958 9.62315560491 0.0 0.0 0.0 0.0 0.329025757061 -0.818221972041 214.121116027 -1507.98095695
1.74577266266e-06 16625.2547184 1.88472522523 1.14912514098e-07 5.01957341863e-08 14.3651084365 9.80402481074 0.0 0.0 0.0 0.0 0.357636385278 -0.828759104099 209.075818407 -1466.68943461
1.75345552553e-06 16625.2646132 1.89522972973 1.11245135862e-07 4.90229829982e-08 14.8018702303 9.98910744843 0.0 0.0 0.0 0.0 0.388770082176 -0.838521050453 203.928997548 -1424.82438239
1.76113838839e-06 16625.2762997 1.91042382382 1.07612761948e-07 4.78732411752e-08 15.2525668169 10.1773507001 0.0 0.0 0.0 0.0 0.42237484427 -0.847368682905 197.848275649 -1377.52992148
1.76882125125e-06 16625.2961204 1.88940940941 1.04031078578e-07 4.67541743138e-08 15.7144647329 10.3679946488 0.0 0.0 0.0 0.0 0.458133501552 -0.855165755597 191.774915948 -1329.78436966
1.77650411411e-06 16625.3544765 1.91013813814 1.00497706894e-07 4.56643349068e-08 16.1868836621 10.5615391272 0.0 0.0 0.0 0.0 0.495972653824 -0.861991560614 185.07513329 -1278.69913961
1.78418697698e-06 16625.3708028 1.90127327327 9.70408601635e-08 4.46055166104e-08 16.6670429171 10.7575654612 0.0 0.0 0.0 0.0 0.535709836189 -0.867871315775 178.139728987 -1226.9803503
1.79186983984e-06 16625.3840681 1.87218668669 9.36776701097e-08 4.3581921338e-08 17.1522429484 10.9552989684 0.0 0.0 0.0 0.0 0.577081031555 -0.872871698363 170.983149191 -1173.2311205
1.7995527027e-06 16625.3972441 1.88507027027 9.04193947563e-08 4.25973351738e-08 17.6384436625 11.1534858575 0.0 0.0 0.0 0.0 0.619660767846 -0.876997628591 163.438166344 -1118.94156504
1.80723556557e-06 16625.4102559 1.91683243243 8.72717167324e-08 4.16498468558e-08 18.1229538972 11.3528456259 0.0 0.0 0.0 0.0 0.663115274482 -0.880328667492 155.88435995 -1063.39206304
1.81491842843e-06 16625.4240201 1.8926015015 8.42413198704e-08 4.0742485601e-08 18.6026424652 11.5521577737 0.0 0.0 0.0 0.0 0.707138417007 -0.882973499093 147.988615158 -1007.44144505
1.82260129129e-06 16625.4382286 1.87254144144 8.13413871129e-08 3.98804770967e-08 19.0729379267 11.7501064378 0.0 0.0 0.0 0.0 0.751230080914 -0.884985448512 140.099941998 -951.053916713
1.83028415415e-06 16625.452437 1.91912052052 7.85754045045e-08 3.90635215778e-08 19.5317955441 11.9455930781 0.0 0.0 0.0 0.0 0.795121167284 -0.886472121794 132.161040707 -894.824784284
1.83796701702e-06 16625.4666455 1.89348988989 7.59515187198e-08 3.82954981818e-08 19.9764174351 12.1372560695 0.0 0.0 0.0 0.0 0.83848826987 -0.88750050892 124.198091738 -838.795754025
1.84564987988e-06 16625.4811255 1.85421591592 7.34835385855e-08 3.75792111987e-08 20.4043653925 12.3235557128 0.0 0.0 0.0 0.0 0.880958970938 -0.888115867923 116.286123702 -783.73686083
1.85333274274e-06 16625.4954975 1.84474524525 7.11759797252e-08 3.69137286163e-08 20.8144558889 12.5032622581 0.0 0.0 0.0 0.0 0.922263247681 -0.88844637173 108.531325206 -729.296424604
1.86101560561e-06 16625.5091985 1.86482602603 6.90272289427e-08 3.62962531537e-08 21.2051610186 12.6752015214 0.0 0.0 0.0 0.0 0.962038371216 -0.888530239894 100.766441314 -676.616130783
1.86869846847e-06 16625.5228995 1.8629036036 6.70353970416e-08 3.57279132895e-08 21.5750943307 12.8383358456 0.0 0.0 0.0 0.0 1.00011935924 -0.888357826639 93.381572085 -624.582372537
1.87638133133e-06 16625.5572446 1.89292912913 6.51965747314e-08 3.52089855015e-08 21.9224105135 12.9926231063 0.0 0.0 0.0 0.0 1.03634531298 -0.888022031347 86.0548667987 -575.155768059
1.88406419419e-06 16625.5977114 1.88398108108 6.35056776553e-08 3.47345584783e-08 22.2467036853 13.1381518167 0.0 0.0 0.0 0.0 1.07062804081 -0.887505905734 79.0352043747 -526.148033935
1.89174705706e-06 16625.6235449 1.88111441441 6.19612915392e-08 3.43008661153e-08 22.5480149163 13.2749480995 0.0 0.0 0.0 0.0 1.10292486401 -0.886835362989 72.3083766462 -480.541468742
1.89942991992e-06 16625.6360499 1.88893323323 6.056531455e-08 3.39058041177e-08 22.8256775399 13.4029235298 0.0 0.0 0.0 0.0 1.13312878195 -0.886039193608 65.6948689335 -435.352471013
1.90711278278e-06 16625.6481471 1.88416616617 5.93104787809e-08 3.35486355208e-08 23.0792475624 13.5219603856 0.0 0.0 0.0 0.0 1.16115987808 -0.885164229978 59.7186140377 -394.832064486
1.91479564565e-06 16625.6598184 1.86276876877 5.81848379016e-08 3.32278817716e-08 23.3097107902 13.6328661772 0.0 0.0 0.0 0.0 1.18702238457 -0.884297499265 53.7345915204 -354.935611459
1.92247850851e-06 16625.6700219 1.82130680681 5.71832944182e-08 3.29406557561e-08 23.5160387874 13.7357367026 0.0 0.0 0.0 0.0 1.21057978462 -0.883512510369 48.3871380431 -319.104955439
1.93016137137e-06 16625.6801708 1.84723943944 5.62968954902e-08 3.26832890422e-08 23.7000247684 13.8309920945 0.0 0.0 0.0 0.0 1.23193973998 -0.882893625147 43.2213017148 -284.400975818
1.93784423423e-06 16625.68974 1.86562432432 5.57241295796e-08 3.25109292793e-08 23.8225086206 13.8916534839 0.0 0.0 0.0 0.0 1.24595452529 -0.882356109563 38.4025160661 -252.998563814
1.9455270971e-06 16625.6984935 1.8696962963 5.52055959081e-08 3.23543591542e-08 23.9341378276 13.9485221285 0.0 0.0 0.0 0.0 1.25893040665 -0.881887995414 34.0780338278 -223.099296752
1.95320995996e-06 16625.7065221 1.88058038038 5.47333024613e-08 3.2213700733e-08 24.0348242887 14.0015907696 0.0 0.0 0.0 0.0 1.27078282356 -0.881483691647 29.7946223234 -196.056140933
1.96089282282e-06 16625.7141337 1.87038318318 5.43058992713e-08 3.20890164775e-08 24.1244476809 14.0508050669 0.0 0.0 0.0 0.0 1.28151767565 -0.881181938333 26.2947694889 -171.103310426
1.96857568569e-06 16625.7212471 1.84376956957 5.39224153225e-08 3.19799612318e-08 24.2038934541 14.0955058501 0.0 0.0 0.0 0.0 1.29120464656 -0.880962684279 22.7903679003 -148.681589596
1.97625854855e-06 16625.727554 1.84555155155 5.35839639357e-08 3.18868175951e-08 24.2731536704 14.1357116202 0.0 0.0 0.0 0.0 1.29982303503 -0.880798053268 19.8053638738 -128.495813273
1.98394141141e-06 16625.7333443 1.84240810811 5.32921262323e-08 3.18079881196e-08 24.3335061636 14.1710317316 0.0 0.0 0.0 0.0 1.30744968008 -0.880722487053 17.066162072 -110.197455137
1.99162427427e-06 16625.7387269 1.82275485485 5.30411869807e-08 3.17412497273e-08 24.3860778235 14.2021358444 0.0 0.0 0.0 0.0 1.31416114349 -0.880698420828 14.5334873274 -94.2283991465
1.99930713714e-06 16625.7435023 1.80836766767 5.28278794743e-08 3.16856207259e-08 24.4312998203 14.229112735 0.0 0.0 0.0 0.0 1.31997223317 -0.880741524214 12.4583731221 -79.5507689627
In [19]:
#g = run(inp,launcher)
if "run" function is placed in a sctipt, the following post-processing code will be executed after the GENESIS simulation is finished
the following two python scripts would start ocelot/genesis several-stage simulation for many independent runs
Possible post-processing between stages:
In [10]:
exp_dir='/some_directory'
run_number=10
run_ids = xrange(0,run_number)
start_stage = 1
stop_stage = 4
# set simulation parameters
# prepare electron beam file
stage=1
if start_stage <= stage and stop_stage >= stage:
for run_id in run_ids:
run_dir = exp_dir + 'run_' + str(run_id)
#prepare input, specify parameters
#inp.ipseed = 17111*(run_id + 1)
#
#
#
#g = run(inp,launcher)
print('run #',run_id, ' of stage ',stage)
stage=2
if start_stage <= stage and stop_stage >= stage:
for run_id in run_ids:
run_dir = exp_dir + 'run_' + str(run_id)
#prepare input based on stage 1 output
#inp.ipseed = 27222*(run_id + 1)
#
#inp.distfile = 'run.'+ str(inp.runid)+'.s1.gout.dist'
#
#g = run(inp,launcher)
print('run #',run_id, ' of stage ',stage)
stage=3
if start_stage <= stage and stop_stage >= stage:
for run_id in run_ids:
run_dir = exp_dir + 'run_' + str(run_id)
#prepare input based on stage 1 output
#inp.ipseed = 37333*(run_id + 1)
#
#inp.distfile = 'run.'+ str(inp.runid)+'.s1.gout.dist'
#
#g = run(inp,launcher)
print('run #',run_id, ' of stage ',stage)
#stage=n .........
run # 0 of stage 1
run # 1 of stage 1
run # 2 of stage 1
run # 3 of stage 1
run # 4 of stage 1
run # 5 of stage 1
run # 6 of stage 1
run # 7 of stage 1
run # 8 of stage 1
run # 9 of stage 1
run # 0 of stage 2
run # 1 of stage 2
run # 2 of stage 2
run # 3 of stage 2
run # 4 of stage 2
run # 5 of stage 2
run # 6 of stage 2
run # 7 of stage 2
run # 8 of stage 2
run # 9 of stage 2
run # 0 of stage 3
run # 1 of stage 3
run # 2 of stage 3
run # 3 of stage 3
run # 4 of stage 3
run # 5 of stage 3
run # 6 of stage 3
run # 7 of stage 3
run # 8 of stage 3
run # 9 of stage 3
Content source: sergey-tomin/workshop
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