SBML converters

sbmlutils provides functionality for converting formats to SBML and SBML to some formats.



In [1]:

    
from sbmlutils.report import sbmlreport

XPP to SBML

In this example a given xpp model is converted to SBML.



In [2]:

    
from sbmlutils.converters import xpp
from sbmlutils import validation

# convert to SBML
xpp.xpp2sbml(xpp_file="./xpp/SkM_AP_KCa.ode", sbml_file="./xpp/SkM_AP_KCa.xml")









    



ERROR:root:Using notes strings is deprecated, use 'Notes' instead.






    



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xpp2sbml:  ./xpp/SkM_AP_KCa.ode -> ./xpp/SkM_AP_KCa.xml
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/home/mkoenig/git/sbmlutils/docs_builder/notebooks/xpp/SkM_AP_KCa.xml
valid                    : TRUE
check time (s)           : 0.009
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