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<TITLE>BLAST Search Results</TITLE>
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<b>BLASTN 2.2.18 [Mar-02-2008]</b>
<b><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Retrieve&list_uids
=9254694&dopt=Citation">Reference</a>:</b>
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
<b>Query=</b> UNKNOWN_SEQUENCE
(50 letters)
<b>Database:</b> pdb_nucleotide
16,795 sequences; 3,045,280 total letters
Searching..................................................done
<PRE>
Score E
Sequences producing significant alignments: (bits) Value
2AU4:1:A|pdbid|entity|chain(s)|sequence <a href = #3797> 24</a> 5.1
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<PRE>
><a name = 3797></a>2AU4:1:A|pdbid|entity|chain(s)|sequence
Length = 41
Score = 24.3 bits (12), Expect = 5.1
Identities = 12/12 (100%)
Strand = Plus / Plus
Query: 26 cgcttcggcgtg 37
||||||||||||
Sbjct: 18 cgcttcggcgtg 29
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<PRE>
Database: pdb_nucleotide
Posted date: Jun 4, 2017 7:12 AM
Number of letters in database: 3,045,280
Number of sequences in database: 16,795
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 16795
Number of Hits to DB: 1662
Number of extensions: 13
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 50
Length of database: 3,045,280
Length adjustment: 13
Effective length of query: 37
Effective length of database: 2,826,945
Effective search space: 104596965
Effective search space used: 104596965
X1: 10 (19.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 10 (20.3 bits)
S2: 12 (24.3 bits)
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