Cellpy tweaking

Notebook for testing ideas and check stuff.

Remember to run the notebook in the correct environment (for conda, issue conda install nb_conda to be able to switch environments).



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import os
import sys
import matplotlib.pyplot as plt
%matplotlib inline



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import cellpy.parameters.prms as prms
from cellpy import cellreader



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from cellpy import log
log.setup_logging(default_level="DEBUG")

Some digging into the cellpy structure



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# print settings 
prm_dicts = [d for d in dir(prms) if not d.startswith("_")]

for d in prm_dicts:
    if isinstance(getattr(prms,d), (dict, )) and not d.startswith("excel"):
        print(f"\n--------------------{d}----------------------")
        for variable in getattr(prms, d):
            print(f"{variable}: ", end="")
            print(eval("prms.%s['%s']" % (d, variable)))

Defining filenames etc



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current_file_path = os.getcwd()
relative_test_data_dir = "../testdata"
test_data_dir = os.path.abspath(os.path.join(current_file_path, relative_test_data_dir))
test_data_dir_raw = os.path.join(test_data_dir, "data")
test_res_file = "20160805_test001_45_cc_01.res"
test_res_file_full = os.path.join(test_data_dir_raw,test_res_file)
test_data_dir_out = os.path.join(test_data_dir, "out")
test_data_dir_cellpy = os.path.join(test_data_dir, "hdf5")
test_cellpy_file = "20160805_test001_45_cc.h5"
test_cellpy_file_tmp = "tmpfile.h5"
test_cellpy_file_full = os.path.join(test_data_dir_cellpy,test_cellpy_file)
test_cellpy_file_tmp_full = os.path.join(test_data_dir_cellpy,test_cellpy_file_tmp)
test_run_name = "20160805_test001_45_cc"



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assert os.path.isfile(test_res_file_full)
assert os.path.isfile(test_cellpy_file_full)
assert os.path.isdir(test_data_dir)
# os.listdir(test_data_dir)

Loading and looking at what we got



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celldata = cellreader.CellpyData()
#celldata.from_raw(test_res_file_full)
#celldata.set_mass(0.34)
celldata.load(test_cellpy_file_full)



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data = celldata.cell



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for x in dir(data):
    if not x.startswith("__"):
        if not x in ["summary", "raw", "steps"]:
            print(f"{x}: {getattr(data,x)}")



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data.summary.head()



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data.raw.head()



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data.steps.head()



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celldata.make_summary()



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print(data.summary_made)

dfsummary_made is wrong in the cellpyfile

Task 1: capacity voltage curves

Would like to make it possible to chose how the voltage curves are presented.



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# lets see what cycles we have
cycles = celldata.get_cycle_numbers()
print(cycles)



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