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Set Differences with OTU Name





In [1]:



    


%%bash
if [ -f ../tmp/run1.txt ]; then rm ../tmp/run1.txt; fi
if [ -f ../tmp/run2.txt ]; then rm ../tmp/run2.txt; fi
if [ -f ../tmp/run3.txt ]; then rm ../tmp/run3.txt; fi
if [ -f ../tmp/data.txt ]; then rm ../tmp/data.txt; fi
if [ -f ../tmp/header.txt ]; then rm ../tmp/header.txt; fi
if [ -f ../tmp/pasted.txt ]; then rm ../tmp/pasted.txt; fi

cat ../outputs/AmericanGut-Gut-Diet-OV-Results-Fizzy-MIM.txt | awk -F $'\t' '{print $1}' | tail -n +2 > ../tmp/run1.txt
cat ../outputs/AmericanGut-Gut-Diet-OmniVegan-Results-Fizzy-MIM.txt | awk -F $'\t' '{print $1}' | tail -n +2 > ../tmp/run2.txt
cat ../outputs/AmericanGut-Gut-Sex-Results-Fizzy-MIM.txt | awk -F $'\t' '{print $1}' | tail -n +2 > ../tmp/run3.txt
echo 'OV OmniVegan SEX' | tr ' ' '\t' > ../tmp/header.txt
paste ../tmp/run1.txt ../tmp/run2.txt ../tmp/run3.txt | sed -e "s/.\_\_//g" > ../tmp/data.txt
cat ../tmp/header.txt ../tmp/data.txt > ../tmp/pasted.txt



    











In [2]:



    


import pandas as pd
df = pd.read_csv("../tmp/pasted.txt",sep="\t")
for n,a in enumerate(df["SEX"]):
    print n,a



    


















    






0 Bacteria,Proteobacteria,Gammaproteobacteria,Alteromonadales,Shewanellaceae,Shewanella,
1 Bacteria,Bacteroidetes,Flavobacteriia,Flavobacteriales,Flavobacteriaceae,Flavobacterium,
2 Bacteria,Actinobacteria,Thermoleophilia,Gaiellales,Gaiellaceae,,
3 Bacteria,Proteobacteria,Alphaproteobacteria,Sphingomonadales,Sphingomonadaceae,Sphingomonas,
4 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Prevotellaceae,Prevotella,
5 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
6 Bacteria,Spirochaetes,Spirochaetes,Spirochaetales,Spirochaetaceae,Treponema,
7 Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,,,
8 Bacteria,Actinobacteria,Actinobacteria,Bifidobacteriales,Bifidobacteriaceae,Bifidobacterium,
9 Bacteria,Proteobacteria,Alphaproteobacteria,Rhizobiales,Methylobacteriaceae,Methylobacterium,
10 Bacteria,Proteobacteria,Gammaproteobacteria,Thiohalorhabdales,,,
11 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
12 Bacteria,Bacteroidetes,Flavobacteriia,Flavobacteriales,Weeksellaceae,,
13 Bacteria,Firmicutes,Erysipelotrichi,Erysipelotrichales,Erysipelotrichaceae,,
14 Bacteria,Proteobacteria,Gammaproteobacteria,Enterobacteriales,Enterobacteriaceae,,
15 Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,Comamonadaceae,,
16 Bacteria,Actinobacteria,Thermoleophilia,Solirubrobacterales,,,
17 Bacteria,Proteobacteria,Gammaproteobacteria,,,,
18 Bacteria,Proteobacteria,Deltaproteobacteria,Myxococcales,,,
19 Bacteria,Cyanobacteria,Nostocophycideae,Stigonematales,Rivulariaceae,Calothrix,
20 Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Nocardiaceae,Rhodococcus,ruber
21 Bacteria,Chloroflexi,Chloroflexi,AKIW781,,,
22 Bacteria,Acidobacteria,Solibacteres,Solibacterales,Solibacteraceae,,
23 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,Oscillospira,
24 Bacteria,Bacteroidetes,Rhodothermi,Rhodothermales,Balneolaceae,KSA1,
25 Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Streptomycetaceae,Kitasatospora,
26 Bacteria,Bacteroidetes,Flavobacteriia,Flavobacteriales,Weeksellaceae,,
27 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,Oscillospira,
28 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
29 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Blautia,
30 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
31 Bacteria,Bacteroidetes,Sphingobacteriia,Sphingobacteriales,Sphingobacteriaceae,Pedobacter,
32 Bacteria,Actinobacteria,Coriobacteriia,Coriobacteriales,Coriobacteriaceae,,
33 Bacteria,Proteobacteria,Betaproteobacteria,Rhodocyclales,Rhodocyclaceae,Rhodocyclus,
34 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Blautia,producta
35 Bacteria,Proteobacteria,Betaproteobacteria,Methylophilales,,,
36 Bacteria,Bacteroidetes,Sphingobacteriia,Sphingobacteriales,Sphingobacteriaceae,Sphingobacterium,faecium
37 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
38 Bacteria,Firmicutes,Bacilli,Lactobacillales,Carnobacteriaceae,Trichococcus,
39 Bacteria,Proteobacteria,Gammaproteobacteria,Vibrionales,Vibrionaceae,Vibrio,
40 Bacteria,Firmicutes,Bacilli,Bacillales,Staphylococcaceae,Staphylococcus,
41 Bacteria,Firmicutes,Bacilli,Bacillales,Sporolactobacillaceae,,
42 Bacteria,Firmicutes,Bacilli,Bacillales,Bacillaceae,Pontibacillus,
43 Bacteria,Actinobacteria,Thermoleophilia,Solirubrobacterales,,,
44 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Dorea,
45 Bacteria,Proteobacteria,Alphaproteobacteria,Sphingomonadales,Sphingomonadaceae,,
46 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Lachnospira,
47 Bacteria,Proteobacteria,Alphaproteobacteria,Rhodobacterales,Rhodobacteraceae,Paracoccus,aminovorans
48 Bacteria,Proteobacteria,Alphaproteobacteria,Rhodobacterales,Rhodobacteraceae,Rhodobacter,
49 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
50 Bacteria,Firmicutes,Erysipelotrichi,Erysipelotrichales,Erysipelotrichaceae,Catenibacterium,
51 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
52 Bacteria,Proteobacteria,Alphaproteobacteria,Rhodobacterales,Rhodobacteraceae,Rhodobacter,
53 Bacteria,Proteobacteria,Alphaproteobacteria,Rhizobiales,Hyphomicrobiaceae,Devosia,
54 Bacteria,Bacteroidetes,Sphingobacteriia,Sphingobacteriales,,,
55 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
56 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Coprococcus,
57 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
58 Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,Comamonadaceae,Acidovorax,caeni
59 Bacteria,Firmicutes,Erysipelotrichi,Erysipelotrichales,Erysipelotrichaceae,Allobaculum,
60 Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Gordoniaceae,Gordonia,
61 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,Oscillospira,
62 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
63 Bacteria,Bacteroidetes,Cytophagia,Cytophagales,Cytophagaceae,Hymenobacter,
64 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
65 Bacteria,Proteobacteria,Gammaproteobacteria,Xanthomonadales,Xanthomonadaceae,,
66 Bacteria,Proteobacteria,Gammaproteobacteria,Oceanospirillales,SUP05,,
67 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Blautia,
68 Bacteria,Acidobacteria,Solibacteres,Solibacterales,,,
69 Bacteria,Proteobacteria,Betaproteobacteria,Neisseriales,Neisseriaceae,Neisseria,subflava
70 Bacteria,Proteobacteria,Gammaproteobacteria,,,,
71 Bacteria,Firmicutes,Clostridia,Clostridiales,Veillonellaceae,Veillonella,dispar
72 Bacteria,Bacteroidetes,Flavobacteriia,Flavobacteriales,Flavobacteriaceae,Flavobacterium,
73 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Ruminococcus,gnavus
74 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
75 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,Ruminococcus,
76 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
77 Bacteria,Firmicutes,Bacilli,Bacillales,,,
78 Bacteria,Firmicutes,Bacilli,Lactobacillales,Lactobacillaceae,Lactobacillus,
79 Bacteria,Firmicutes,Clostridia,Clostridiales,Clostridiaceae,,
80 Bacteria,Firmicutes,Clostridia,Clostridiales,Veillonellaceae,Dialister,
81 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,,,
82 Bacteria,Proteobacteria,Gammaproteobacteria,Xanthomonadales,Xanthomonadaceae,,
83 Bacteria,Bacteroidetes,Saprospirae,Saprospirales,Chitinophagaceae,,
84 Bacteria,Bacteroidetes,Sphingobacteriia,Sphingobacteriales,Sphingobacteriaceae,,
85 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,Ruminococcus,
86 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
87 Bacteria,Proteobacteria,Betaproteobacteria,Neisseriales,Neisseriaceae,Neisseria,subflava
88 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
89 Bacteria,Firmicutes,Bacilli,Lactobacillales,Carnobacteriaceae,Granulicatella,
90 Bacteria,Proteobacteria,Deltaproteobacteria,Bdellovibrionales,Bdellovibrionaceae,Bdellovibrio,bacteriovorus
91 Bacteria,Firmicutes,Bacilli,Lactobacillales,Streptococcaceae,Streptococcus,
92 Bacteria,Proteobacteria,Betaproteobacteria,Neisseriales,Neisseriaceae,Neisseria,subflava
93 Bacteria,Bacteroidetes,Saprospirae,Saprospirales,Chitinophagaceae,,
94 Bacteria,Proteobacteria,Gammaproteobacteria,Pseudomonadales,Pseudomonadaceae,Pseudomonas,
95 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
96 Bacteria,Bacteroidetes,Cytophagia,Cytophagales,Cytophagaceae,Pontibacter,
97 Bacteria,Proteobacteria,Epsilonproteobacteria,Campylobacterales,Campylobacteraceae,Sulfurospirillum,
98 Bacteria,Proteobacteria,Betaproteobacteria,SC-I-84,,,
99 Bacteria,Bacteroidetes,Saprospirae,Saprospirales,Chitinophagaceae,,
100 Bacteria,Proteobacteria,Alphaproteobacteria,Rhodobacterales,Rhodobacteraceae,Paracoccus,
101 Bacteria,Proteobacteria,Alphaproteobacteria,Rhizobiales,,,
102 Bacteria,Proteobacteria,Betaproteobacteria,Neisseriales,Neisseriaceae,Neisseria,
103 Bacteria,Proteobacteria,Alphaproteobacteria,RF32,,,
104 Bacteria,Planctomycetes,Planctomycetia,Pirellulales,Pirellulaceae,,
105 Bacteria,Firmicutes,Clostridia,OPB54,,,
106 Bacteria,Proteobacteria,Gammaproteobacteria,Xanthomonadales,Xanthomonadaceae,,
107 Bacteria,Firmicutes,Clostridia,Clostridiales,Clostridiaceae,Clostridium,
108 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
109 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
110 Bacteria,Bacteroidetes,Sphingobacteriia,Sphingobacteriales,Sphingobacteriaceae,,
111 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
112 Bacteria,Planctomycetes,Planctomycetia,Gemmatales,Isosphaeraceae,,
113 Bacteria,Proteobacteria,Alphaproteobacteria,Rhizobiales,Phyllobacteriaceae,Mesorhizobium,
114 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Ruminococcus,torques
115 Bacteria,Planctomycetes,Planctomycetia,Gemmatales,Isosphaeraceae,,
116 Bacteria,Proteobacteria,Gammaproteobacteria,Thiotrichales,Piscirickettsiaceae,,
117 Bacteria,Proteobacteria,Alphaproteobacteria,Rhodospirillales,Acetobacteraceae,,
118 Bacteria,Verrucomicrobia,Pedosphaerae,Pedosphaerales,,,
119 Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,Oxalobacteraceae,,
120 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
121 Bacteria,Proteobacteria,Gammaproteobacteria,Xanthomonadales,Sinobacteraceae,,
122 Bacteria,Firmicutes,Bacilli,Lactobacillales,Streptococcaceae,Streptococcus,
123 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
124 Bacteria,Firmicutes,Bacilli,Lactobacillales,Streptococcaceae,Streptococcus,
125 Bacteria,Firmicutes,Bacilli,Bacillales,Paenibacillaceae,,
126 Bacteria,Proteobacteria,Gammaproteobacteria,Thiotrichales,Piscirickettsiaceae,,
127 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
128 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
129 Bacteria,Firmicutes,Clostridia,Clostridiales,Dehalobacteriaceae,Dehalobacterium,
130 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Bacteroidaceae,Bacteroides,
131 Bacteria,Proteobacteria,Alphaproteobacteria,Sphingomonadales,Sphingomonadaceae,Sphingomonas,
132 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
133 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,,,
134 Bacteria,Bacteroidetes,Cytophagia,Cytophagales,Cytophagaceae,Spirosoma,
135 Bacteria,Firmicutes,Bacilli,Bacillales,,,
136 Bacteria,Proteobacteria,Betaproteobacteria,,,,
137 Bacteria,Proteobacteria,Gammaproteobacteria,Xanthomonadales,Sinobacteraceae,,
138 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
139 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
140 Bacteria,Proteobacteria,Alphaproteobacteria,Sphingomonadales,Sphingomonadaceae,Kaistobacter,
141 Bacteria,Firmicutes,Bacilli,Lactobacillales,Aerococcaceae,Aerococcus,
142 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
143 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,Ruminococcus,
144 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Bacteroidaceae,Bacteroides,
145 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
146 Bacteria,Proteobacteria,Deltaproteobacteria,Myxococcales,,,
147 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
148 Bacteria,Firmicutes,Clostridia,Clostridiales,Christensenellaceae,,
149 Bacteria,Bacteroidetes,Cytophagia,Cytophagales,Cytophagaceae,Hymenobacter,
150 Bacteria,Proteobacteria,Gammaproteobacteria,Pseudomonadales,Pseudomonadaceae,Pseudomonas,stutzeri
151 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
152 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
153 Bacteria,Proteobacteria,Gammaproteobacteria,Xanthomonadales,Xanthomonadaceae,,
154 Bacteria,Cyanobacteria,Chloroplast,Streptophyta,,,
155 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
156 Bacteria,Firmicutes,Bacilli,Bacillales,Alicyclobacillaceae,,
157 Bacteria,Actinobacteria,Thermoleophilia,Gaiellales,Gaiellaceae,,
158 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Prevotellaceae,Prevotella,
159 Bacteria,Acidobacteria,Acidobacteria-6,iii1-15,mb2424,,
160 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
161 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
162 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
163 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
164 Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Nocardioidaceae,,
165 Bacteria,Bacteroidetes,Cytophagia,Cytophagales,Cytophagaceae,,
166 Bacteria,Proteobacteria,Gammaproteobacteria,Chromatiales,,,
167 Bacteria,Firmicutes,Clostridia,Clostridiales,Veillonellaceae,,
168 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Prevotellaceae,Prevotella,
169 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Lachnospira,
170 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
171 Bacteria,Proteobacteria,Betaproteobacteria,SC-I-84,,,
172 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Dorea,
173 Bacteria,Acidobacteria,Chloracidobacteria,RB41,Ellin6075,,
174 Bacteria,Firmicutes,Bacilli,Bacillales,Staphylococcaceae,Staphylococcus,sciuri
175 Bacteria,TM7,TM7-3,,,,
176 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
177 Bacteria,Proteobacteria,Gammaproteobacteria,Enterobacteriales,Enterobacteriaceae,,
178 Bacteria,Proteobacteria,Gammaproteobacteria,Pseudomonadales,Moraxellaceae,Acinetobacter,
179 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Bacteroidaceae,Bacteroides,caccae
180 Bacteria,Firmicutes,Bacilli,Bacillales,Planococcaceae,Paenisporosarcina,
181 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
182 Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,Burkholderiaceae,Burkholderia,
183 Bacteria,Synergistetes,Synergistia,Synergistales,Dethiosulfovibrionaceae,Pyramidobacter,piscolens
184 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Barnesiellaceae,,
185 Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,,,
186 Bacteria,Proteobacteria,Deltaproteobacteria,MIZ46,,,
187 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
188 Bacteria,Gemmatimonadetes,Gemmatimonadetes,C114,,,
189 Bacteria,Firmicutes,Clostridia,Clostridiales,Christensenellaceae,,
190 Bacteria,Bacteroidetes,Sphingobacteriia,Sphingobacteriales,Sphingobacteriaceae,,
191 Bacteria,Proteobacteria,Alphaproteobacteria,Rhizobiales,,,
192 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
193 Bacteria,Firmicutes,Bacilli,Bacillales,Planococcaceae,,
194 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
195 Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Dermacoccaceae,Dermacoccus,
196 Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,Comamonadaceae,,
197 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Dorea,
198 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Moryella,
199 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Epulopiscium,
200 Bacteria,Proteobacteria,Alphaproteobacteria,Rhizobiales,Brucellaceae,Ochrobactrum,
201 Bacteria,Proteobacteria,Gammaproteobacteria,Pseudomonadales,Pseudomonadaceae,Pseudomonas,veronii
202 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
203 Bacteria,Verrucomicrobia,Spartobacteria,Chthoniobacterales,Chthoniobacteraceae,DA101,
204 Bacteria,Proteobacteria,Alphaproteobacteria,Rhodospirillales,Acetobacteraceae,,
205 Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Corynebacteriaceae,Corynebacterium,durum
206 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Bacteroidaceae,Bacteroides,
207 Bacteria,Proteobacteria,Alphaproteobacteria,Rhizobiales,Methylobacteriaceae,,
208 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Barnesiellaceae,,
209 Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,Comamonadaceae,Limnobacter,
210 Bacteria,Proteobacteria,Betaproteobacteria,Neisseriales,Neisseriaceae,Neisseria,subflava
211 Bacteria,Firmicutes,Bacilli,Bacillales,Bacillaceae,Bacillus,firmus
212 Bacteria,Proteobacteria,Alphaproteobacteria,BD7-3,,,
213 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
214 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Epulopiscium,
215 Bacteria,Verrucomicrobia,Spartobacteria,Chthoniobacterales,Chthoniobacteraceae,CandidatusXiphinematobacter,
216 Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,Comamonadaceae,,
217 Bacteria,Firmicutes,Bacilli,Bacillales,Planococcaceae,Planomicrobium,
218 Bacteria,Proteobacteria,Betaproteobacteria,Neisseriales,Neisseriaceae,,
219 Bacteria,Proteobacteria,Gammaproteobacteria,Enterobacteriales,Enterobacteriaceae,Serratia,
220 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
221 Bacteria,Firmicutes,Bacilli,Lactobacillales,Streptococcaceae,Streptococcus,
222 Bacteria,Lentisphaerae,Lentisphaeria,Victivallales,Victivallaceae,,
223 Bacteria,Firmicutes,Clostridia,Clostridiales,Clostridiaceae,,
224 Bacteria,Proteobacteria,Gammaproteobacteria,Legionellales,Legionellaceae,Tatlockia,
225 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,,,
226 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Prevotellaceae,Prevotella,
227 Bacteria,Bacteroidetes,Saprospirae,Saprospirales,Chitinophagaceae,,
228 Bacteria,Proteobacteria,Gammaproteobacteria,Vibrionales,Vibrionaceae,Vibrio,
229 Bacteria,Firmicutes,Bacilli,Lactobacillales,Leuconostocaceae,Leuconostoc,
230 Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,Burkholderiaceae,,
231 Bacteria,Bacteroidetes,Flavobacteriia,Flavobacteriales,Weeksellaceae,,
232 Bacteria,Proteobacteria,Gammaproteobacteria,Enterobacteriales,Enterobacteriaceae,,
233 Bacteria,Bacteroidetes,Saprospirae,Saprospirales,Chitinophagaceae,,
234 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
235 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
236 Bacteria,Proteobacteria,Gammaproteobacteria,Pseudomonadales,Moraxellaceae,Acinetobacter,
237 Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Streptomycetaceae,Streptomyces,
238 Bacteria,Firmicutes,Clostridia,Clostridiales,Acidaminobacteraceae,Acidaminobacter,
239 Bacteria,Proteobacteria,Gammaproteobacteria,Xanthomonadales,Xanthomonadaceae,,
240 Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,Comamonadaceae,,
241 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
242 Bacteria,Proteobacteria,Alphaproteobacteria,Rickettsiales,mitochondria,,
243 Bacteria,Proteobacteria,Alphaproteobacteria,Rhodospirillales,Acetobacteraceae,,
244 Bacteria,Bacteroidetes,Flavobacteriia,Flavobacteriales,Flavobacteriaceae,Capnocytophaga,
245 Bacteria,Proteobacteria,Gammaproteobacteria,Chromatiales,,,
246 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Roseburia,
247 Bacteria,Proteobacteria,Gammaproteobacteria,Legionellales,Coxiellaceae,,
248 Bacteria,Proteobacteria,Gammaproteobacteria,Xanthomonadales,Xanthomonadaceae,Stenotrophomonas,
249 Bacteria,Firmicutes,Bacilli,Gemellales,Gemellaceae,,
250 Bacteria,Firmicutes,Bacilli,Lactobacillales,Carnobacteriaceae,Carnobacterium,
251 Bacteria,Proteobacteria,Alphaproteobacteria,Rhodospirillales,Acetobacteraceae,,
252 Bacteria,Chloroflexi,Anaerolineae,H39,,,
253 Bacteria,Proteobacteria,Gammaproteobacteria,Pseudomonadales,Pseudomonadaceae,,
254 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
255 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Porphyromonadaceae,Dysgonomonas,gadei
256 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
257 Bacteria,Firmicutes,Clostridia,Clostridiales,Clostridiaceae,Clostridium,
258 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
259 Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Nocardioidaceae,,
260 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,Oscillospira,
261 Bacteria,Proteobacteria,Gammaproteobacteria,Xanthomonadales,Xanthomonadaceae,Stenotrophomonas,geniculata
262 Bacteria,Acidobacteria,Solibacteres,Solibacterales,Solibacteraceae,CandidatusSolibacter,
263 Bacteria,Actinobacteria,Acidimicrobiia,Acidimicrobiales,C111,,
264 Bacteria,Chloroflexi,Anaerolineae,SBR1031,A4b,,
265 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
266 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,S24-7,,
267 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Porphyromonadaceae,Porphyromonas,
268 Bacteria,Proteobacteria,Deltaproteobacteria,Myxococcales,,,
269 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Lachnospira,
270 Bacteria,Proteobacteria,Gammaproteobacteria,Xanthomonadales,Sinobacteraceae,,
271 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
272 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
273 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
274 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,Faecalibacterium,prausnitzii
275 Bacteria,Proteobacteria,Alphaproteobacteria,Rhodobacterales,Rhodobacteraceae,,
276 Bacteria,Bacteroidetes,Cytophagia,Cytophagales,Cytophagaceae,,
277 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
278 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,S24-7,,
279 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Bacteroidaceae,Bacteroides,caccae
280 Bacteria,Fusobacteria,Fusobacteriia,Fusobacteriales,Fusobacteriaceae,Fusobacterium,
281 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Prevotellaceae,Prevotella,melaninogenica
282 Bacteria,Proteobacteria,Alphaproteobacteria,Rhizobiales,Rhizobiaceae,Agrobacterium,
283 Bacteria,Synergistetes,Synergistia,Synergistales,Synergistaceae,,
284 Bacteria,Bacteroidetes,Saprospirae,Saprospirales,Chitinophagaceae,Flavisolibacter,
285 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Bacteroidaceae,Bacteroides,
286 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
287 Bacteria,Proteobacteria,Gammaproteobacteria,Xanthomonadales,Xanthomonadaceae,Pseudoxanthomonas,mexicana
288 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Dorea,formicigenerans
289 Bacteria,Proteobacteria,Alphaproteobacteria,Rhodospirillales,Acetobacteraceae,,
290 Bacteria,Proteobacteria,Gammaproteobacteria,,,,
291 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Ruminococcus,gnavus
292 Bacteria,Firmicutes,Clostridia,Clostridiales,Veillonellaceae,Veillonella,dispar
293 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
294 Bacteria,Acidobacteria,Acidobacteria-6,iii1-15,,,
295 Bacteria,Proteobacteria,Gammaproteobacteria,Enterobacteriales,Enterobacteriaceae,Serratia,marcescens
296 Bacteria,Firmicutes,Bacilli,Bacillales,Paenibacillaceae,Brevibacillus,
297 Bacteria,Firmicutes,Bacilli,Bacillales,Bacillaceae,Bacillus,badius
298 Bacteria,Proteobacteria,Gammaproteobacteria,Pasteurellales,Pasteurellaceae,,
299 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Bacteroidaceae,Bacteroides,
300 Bacteria,Proteobacteria,Gammaproteobacteria,Alteromonadales,Alteromonadaceae,,
301 Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,Oxalobacteraceae,Herbaspirillum,
302 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Prevotellaceae,Prevotella,copri
303 Bacteria,Firmicutes,Clostridia,Clostridiales,Veillonellaceae,Succiniclasticum,
304 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
305 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
306 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Coprococcus,
307 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Porphyromonadaceae,Paludibacter,
308 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
309 Bacteria,Firmicutes,Clostridia,Clostridiales,Clostridiaceae,Clostridium,perfringens
310 Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Streptomycetaceae,Streptomyces,
311 Bacteria,Firmicutes,Clostridia,Clostridiales,Tissierellaceae,Anaerococcus,
312 Bacteria,Firmicutes,Bacilli,Bacillales,Paenibacillaceae,Paenibacillus,
313 Bacteria,Proteobacteria,Gammaproteobacteria,Xanthomonadales,Sinobacteraceae,,
314 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
315 Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Micrococcaceae,,
316 Bacteria,Bacteroidetes,Flavobacteriia,Flavobacteriales,Flavobacteriaceae,Flavobacterium,
317 Bacteria,Proteobacteria,Gammaproteobacteria,Vibrionales,Vibrionaceae,Photobacterium,
318 Bacteria,Proteobacteria,Alphaproteobacteria,Rhodobacterales,Rhodobacteraceae,Rhodobacter,
319 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Ruminococcus,gnavus
320 Bacteria,Firmicutes,Clostridia,Clostridiales,Christensenellaceae,,
321 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Bacteroidaceae,Bacteroides,
322 Bacteria,Proteobacteria,Gammaproteobacteria,Alteromonadales,Chromatiaceae,,
323 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
324 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Lachnospira,
325 Bacteria,Proteobacteria,Alphaproteobacteria,Sphingomonadales,Sphingomonadaceae,Sphingobium,
326 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,Oscillospira,
327 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,Ruminococcus,
328 Bacteria,Chlamydiae,Chlamydiia,Chlamydiales,Parachlamydiaceae,,
329 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
330 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
331 Bacteria,Proteobacteria,Gammaproteobacteria,Pseudomonadales,Moraxellaceae,Acinetobacter,
332 Bacteria,Spirochaetes,Spirochaetes,Spirochaetales,Spirochaetaceae,Treponema,
333 Bacteria,Proteobacteria,Deltaproteobacteria,Myxococcales,Nannocystaceae,Plesiocystis,
334 Bacteria,Firmicutes,Bacilli,Bacillales,Planococcaceae,,
335 Bacteria,Proteobacteria,Alphaproteobacteria,Sphingomonadales,Sphingomonadaceae,Sphingomonas,
336 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
337 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,Faecalibacterium,
338 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Bacteroidaceae,Bacteroides,
339 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
340 Bacteria,Proteobacteria,Gammaproteobacteria,Alteromonadales,HTCC2188,,
341 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
342 Bacteria,Bacteroidetes,Flavobacteriia,Flavobacteriales,Weeksellaceae,,
343 Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,Oxalobacteraceae,,
344 Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Corynebacteriaceae,Corynebacterium,
345 Bacteria,Firmicutes,Bacilli,Lactobacillales,Lactobacillaceae,Lactobacillus,ruminis
346 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Dorea,
347 Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Geodermatophilaceae,,
348 Bacteria,Bacteroidetes,Cytophagia,Cytophagales,Cytophagaceae,Hymenobacter,
349 Bacteria,Firmicutes,Bacilli,Lactobacillales,Enterococcaceae,,
350 Bacteria,Proteobacteria,Gammaproteobacteria,Alteromonadales,OM60,,
351 Bacteria,Firmicutes,Clostridia,Clostridiales,Clostridiaceae,Clostridium,
352 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Coprococcus,
353 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Blautia,
354 Bacteria,Proteobacteria,Alphaproteobacteria,Rhizobiales,Methylocystaceae,Methylosinus,
355 Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,,,
356 Bacteria,Acidobacteria,Acidobacteria-6,iii1-15,,,
357 Bacteria,Bacteroidetes,Flavobacteriia,Flavobacteriales,Flavobacteriaceae,Myroides,
358 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Bacteroidaceae,Bacteroides,
359 Bacteria,Acidobacteria,Chloracidobacteria,RB41,,,
360 Bacteria,Proteobacteria,Betaproteobacteria,Neisseriales,Neisseriaceae,,
361 Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,Comamonadaceae,Hydrogenophaga,
362 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Blautia,
363 Bacteria,Proteobacteria,Betaproteobacteria,Neisseriales,Neisseriaceae,Neisseria,subflava
364 Bacteria,Fusobacteria,Fusobacteriia,Fusobacteriales,Fusobacteriaceae,Fusobacterium,
365 Bacteria,Spirochaetes,Brachyspirae,Brachyspirales,Brachyspiraceae,Brachyspira,
366 Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,Comamonadaceae,,
367 Bacteria,Proteobacteria,Gammaproteobacteria,Pseudomonadales,Pseudomonadaceae,,
368 Bacteria,Proteobacteria,Alphaproteobacteria,Sphingomonadales,,,
369 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
370 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
371 Bacteria,Firmicutes,Bacilli,Bacillales,Bacillaceae,Bacillus,humi
372 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
373 Bacteria,Proteobacteria,Gammaproteobacteria,Thiotrichales,Thiotrichaceae,Thiothrix,
374 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
375 Bacteria,Cyanobacteria,Oscillatoriophycideae,Chroococcales,Xenococcaceae,Chroococcidiopsis,
376 Bacteria,Proteobacteria,Gammaproteobacteria,Enterobacteriales,Enterobacteriaceae,,
377 Bacteria,Firmicutes,Bacilli,Bacillales,Paenibacillaceae,Paenibacillus,
378 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Paraprevotellaceae,Prevotella,
379 Bacteria,Proteobacteria,Gammaproteobacteria,Xanthomonadales,Sinobacteraceae,,
380 Bacteria,Proteobacteria,Alphaproteobacteria,Sphingomonadales,Erythrobacteraceae,,
381 Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,Oxalobacteraceae,,
382 Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Corynebacteriaceae,Corynebacterium,
383 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,Ruminococcus,
384 Bacteria,Proteobacteria,Alphaproteobacteria,Rhizobiales,Rhizobiaceae,Agrobacterium,
385 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Ruminococcus,gnavus
386 Bacteria,Bacteroidetes,Sphingobacteriia,Sphingobacteriales,Sphingobacteriaceae,Pedobacter,
387 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Ruminococcus,
388 Bacteria,Cyanobacteria,Chloroplast,Streptophyta,,,
389 Bacteria,Proteobacteria,Gammaproteobacteria,Chromatiales,,,
390 Bacteria,Proteobacteria,Gammaproteobacteria,Pseudomonadales,Moraxellaceae,Acinetobacter,lwoffii
391 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Dorea,
392 Bacteria,Bacteroidetes,Sphingobacteriia,Sphingobacteriales,Sphingobacteriaceae,Pedobacter,
393 Bacteria,Actinobacteria,Thermoleophilia,Solirubrobacterales,Solirubrobacteraceae,,
394 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
395 Bacteria,Firmicutes,Bacilli,Bacillales,Bacillaceae,Bacillus,
396 Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Nocardioidaceae,Kribbella,
397 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
398 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Epulopiscium,
399 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
400 Bacteria,Proteobacteria,Epsilonproteobacteria,Campylobacterales,Helicobacteraceae,Sulfurimonas,
401 Bacteria,Proteobacteria,Gammaproteobacteria,Chromatiales,,,
402 Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,Oxalobacteraceae,,
403 Bacteria,Proteobacteria,Gammaproteobacteria,Xanthomonadales,Sinobacteraceae,,
404 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
405 Bacteria,Bacteroidetes,Saprospirae,Saprospirales,Chitinophagaceae,,
406 Bacteria,,,,,,
407 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Paraprevotellaceae,Prevotella,tannerae
408 Bacteria,Proteobacteria,Gammaproteobacteria,Pseudomonadales,Pseudomonadaceae,Pseudomonas,citronellolis
409 Bacteria,Bacteroidetes,Saprospirae,Saprospirales,Chitinophagaceae,,
410 Bacteria,Proteobacteria,Betaproteobacteria,SC-I-84,,,
411 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
412 Bacteria,Proteobacteria,Alphaproteobacteria,Rhizobiales,,,
413 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,Faecalibacterium,prausnitzii
414 Bacteria,Proteobacteria,Gammaproteobacteria,Pseudomonadales,Moraxellaceae,Acinetobacter,
415 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
416 Bacteria,Actinobacteria,Thermoleophilia,Gaiellales,Gaiellaceae,,
417 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
418 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,Ruminococcus,
419 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
420 Bacteria,Firmicutes,Bacilli,Bacillales,Bacillaceae,,
421 Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Pseudonocardiaceae,,
422 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,Oscillospira,
423 Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,Burkholderiaceae,Burkholderia,
424 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
425 Bacteria,Proteobacteria,Deltaproteobacteria,Myxococcales,,,
426 Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Mycobacteriaceae,Mycobacterium,celatum
427 Bacteria,Firmicutes,Bacilli,Bacillales,Bacillaceae,Bacillus,flexus
428 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
429 Bacteria,Proteobacteria,Gammaproteobacteria,Pasteurellales,Pasteurellaceae,Haemophilus,parainfluenzae
430 Bacteria,Firmicutes,Bacilli,Lactobacillales,,,
431 Bacteria,Proteobacteria,Gammaproteobacteria,Xanthomonadales,Xanthomonadaceae,,
432 Bacteria,Firmicutes,Bacilli,Bacillales,Bacillaceae,Anoxybacillus,kestanbolensis
433 Bacteria,Planctomycetes,Planctomycetia,Gemmatales,Gemmataceae,,
434 Bacteria,Planctomycetes,Planctomycetia,Gemmatales,Gemmataceae,,
435 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,Ruminococcus,
436 Bacteria,Proteobacteria,Betaproteobacteria,Rhodocyclales,Rhodocyclaceae,,
437 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Ruminococcus,
438 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
439 Bacteria,Firmicutes,Clostridia,Clostridiales,Veillonellaceae,Phascolarctobacterium,
440 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Blautia,producta
441 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
442 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,Faecalibacterium,prausnitzii
443 Bacteria,Bacteroidetes,Sphingobacteriia,Sphingobacteriales,Sphingobacteriaceae,,
444 Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,,,
445 Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Micrococcaceae,,
446 Bacteria,Firmicutes,Bacilli,Bacillales,Bacillaceae,Bacillus,
447 Bacteria,Firmicutes,Clostridia,Clostridiales,Clostridiaceae,,
448 Bacteria,Actinobacteria,Coriobacteriia,Coriobacteriales,Coriobacteriaceae,Collinsella,
449 Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,Comamonadaceae,,
450 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
451 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Dorea,
452 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Porphyromonadaceae,Parabacteroides,distasonis
453 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
454 Bacteria,Proteobacteria,Alphaproteobacteria,Sphingomonadales,Sphingomonadaceae,Sphingomonas,
455 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
456 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
457 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
458 Bacteria,Proteobacteria,Gammaproteobacteria,Xanthomonadales,Xanthomonadaceae,Luteimonas,
459 Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,,,
460 Bacteria,Bacteroidetes,Flavobacteriia,Flavobacteriales,Flavobacteriaceae,Flavobacterium,
461 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Prevotellaceae,Prevotella,
462 Bacteria,Firmicutes,Bacilli,Bacillales,Staphylococcaceae,Jeotgalicoccus,
463 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,Ruminococcus,
464 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
465 Bacteria,Proteobacteria,Gammaproteobacteria,Enterobacteriales,Enterobacteriaceae,,
466 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
467 Bacteria,Firmicutes,Clostridia,Clostridiales,Peptostreptococcaceae,,
468 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,S24-7,,
469 Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,,,
470 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
471 Bacteria,Firmicutes,Bacilli,Bacillales,Planococcaceae,Rummeliibacillus,
472 Bacteria,Proteobacteria,Alphaproteobacteria,Rhizobiales,Hyphomicrobiaceae,,
473 Bacteria,Planctomycetes,Planctomycetia,Gemmatales,Isosphaeraceae,,
474 Bacteria,Firmicutes,Clostridia,Clostridiales,Clostridiaceae,Clostridium,
475 Bacteria,Proteobacteria,Gammaproteobacteria,Enterobacteriales,Enterobacteriaceae,Morganella,morganii
476 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
477 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Bacteroidaceae,Bacteroides,fragilis
478 Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Intrasporangiaceae,,
479 Bacteria,Firmicutes,Clostridia,Clostridiales,Veillonellaceae,Veillonella,
480 Bacteria,Proteobacteria,Gammaproteobacteria,Pseudomonadales,Moraxellaceae,Acinetobacter,
481 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
482 Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,BS11,,
483 Bacteria,Firmicutes,Bacilli,Bacillales,Paenibacillaceae,Paenibacillus,
484 Bacteria,TM7,TM7-3,,,,
485 Bacteria,Firmicutes,Clostridia,Clostridiales,Tissierellaceae,Gallicola,
486 Bacteria,Proteobacteria,Gammaproteobacteria,Enterobacteriales,Enterobacteriaceae,Providencia,
487 Bacteria,Firmicutes,Bacilli,Bacillales,Bacillaceae,Bacillus,
488 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
489 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
490 Bacteria,Actinobacteria,Coriobacteriia,Coriobacteriales,Coriobacteriaceae,,
491 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
492 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
493 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,
494 Bacteria,Firmicutes,Clostridia,Clostridiales,Clostridiaceae,,
495 Bacteria,Firmicutes,Clostridia,Clostridiales,,,
496 Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,,
497 Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Geodermatophilaceae,,
498 Bacteria,Proteobacteria,Alphaproteobacteria,Rhodospirillales,Acetobacteraceae,,
499 Bacteria,Firmicutes,Clostridia,Clostridiales,Ruminococcaceae,,

















In [3]:



    


import numpy as np
ov_uni = np.unique(df["OV"])
omnivegan_uni = np.unique(df["OmniVegan"])
sex_uni = np.unique(df["SEX"])

print "OV:",len(ov_uni)
print "OmniVegan:",len(omnivegan_uni)
print "SEX:",len(sex_uni)



    


















    






OV: 241
OmniVegan: 243
SEX: 233

















In [4]:



    


from sets import Set 
ov_set = Set(df["OV"])
omnivegan_set = Set(df["OmniVegan"])
sex_set = Set(df["SEX"])

uniques_all = ov_set.intersection(omnivegan_set).intersection(sex_set)
uniques_sex_diet = ov_set.difference(sex_set)


print "Set Differences (Diet vs. Sex):"
for f in list(uniques_sex_diet):
    print "  "+f
print "OV:",len(ov_set)
print "OmniVegan:",len(omnivegan_set)
print "SEX:",len(sex_set)



    


















    






Set Differences (Diet vs. Sex):
  Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Rikenellaceae,,
  Bacteria,Firmicutes,Bacilli,Gemellales,Gemellaceae,Gemella,
  Bacteria,Acidobacteria,Chloracidobacteria,DS-100,,,
  Bacteria,Proteobacteria,Alphaproteobacteria,Rhizobiales,Phyllobacteriaceae,,
  Bacteria,Proteobacteria,Betaproteobacteria,Methylophilales,Methylophilaceae,Methylotenera,mobilis
  Bacteria,Firmicutes,Clostridia,Clostridiales,Veillonellaceae,Sporomusa,
  Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,Alcaligenaceae,Achromobacter,
  Bacteria,Proteobacteria,Gammaproteobacteria,Alteromonadales,HTCC2188,HTCC,
  Bacteria,Firmicutes,Bacilli,Bacillales,Staphylococcaceae,Staphylococcus,haemolyticus
  Bacteria,Cyanobacteria,4C0d-2,YS2,,,
  Bacteria,Planctomycetes,Planctomycetia,Gemmatales,Gemmataceae,Gemmata,
  Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Odoribacteraceae,Butyricimonas,
  Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Porphyromonadaceae,Tannerella,
  Bacteria,Planctomycetes,Planctomycetia,Pirellulales,Pirellulaceae,Pirellula,
  Archaea,Euryarchaeota,Halobacteria,Halobacteriales,Halobacteriaceae,Haloplanus,
  Bacteria,Firmicutes,Erysipelotrichi,Erysipelotrichales,Erysipelotrichaceae,Coprobacillus,
  Bacteria,Proteobacteria,Gammaproteobacteria,Oceanospirillales,Halomonadaceae,CandidatusPortiera,
  Bacteria,Proteobacteria,Deltaproteobacteria,Myxococcales,Myxococcaceae,,
  Bacteria,Tenericutes,Mollicutes,Mycoplasmatales,Mycoplasmataceae,Mycoplasma,
  Bacteria,Firmicutes,Clostridia,Clostridiales,Syntrophomonadaceae,Syntrophomonas,
  Bacteria,Proteobacteria,Deltaproteobacteria,Bdellovibrionales,Bdellovibrionaceae,Bdellovibrio,
  Bacteria,Proteobacteria,Gammaproteobacteria,Xanthomonadales,Sinobacteraceae,Steroidobacter,
  Bacteria,Acidobacteria,Acidobacteriia,Acidobacteriales,Koribacteraceae,,
  Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,Oxalobacteraceae,Janthinobacterium,
  Bacteria,Proteobacteria,Gammaproteobacteria,Pasteurellales,Pasteurellaceae,Haemophilus,influenzae
  Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Cellulomonadaceae,Cellulomonas,
  Bacteria,Actinobacteria,Acidimicrobiia,Acidimicrobiales,,,
  Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Actinomycetaceae,Actinomyces,
  Bacteria,Gemmatimonadetes,Gemm-3,,,,
  Bacteria,Proteobacteria,Deltaproteobacteria,Myxococcales,Myxococcaceae,Myxococcus,
  Bacteria,Proteobacteria,Gammaproteobacteria,Vibrionales,Pseudoalteromonadaceae,Pseudoalteromonas,
  Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Propionibacteriaceae,Propionibacterium,acnes
  Bacteria,Firmicutes,Bacilli,Bacillales,Bacillaceae,Bacillus,clausii
  Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Micrococcaceae,Citricoccus,alkalitolerans
  Bacteria,Proteobacteria,Betaproteobacteria,Rhodocyclales,Rhodocyclaceae,Propionivibrio,
  Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Cellulomonadaceae,Actinotalea,
  Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,Oxalobacteraceae,Ralstonia,
  Bacteria,Firmicutes,Clostridia,Clostridiales,Veillonellaceae,Selenomonas,
  Bacteria,Thermi,Deinococci,Deinococcales,Deinococcaceae,Deinococcus,
  Bacteria,TM7,TM7-1,,,,
  Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Roseburia,faecis
  Bacteria,Bacteroidetes,Rhodothermi,Rhodothermales,Rhodothermaceae,Rubricoccus,
  Bacteria,Bacteroidetes,Saprospirae,Saprospirales,,,
  Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Micrococcaceae,Nesterenkonia,
  Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Butyrivibrio,
  Bacteria,Proteobacteria,Betaproteobacteria,Rhodocyclales,Rhodocyclaceae,Azoarcus,
  Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Nocardioidaceae,Nocardioides,
  Bacteria,TM7,TM7-3,EW055,,,
  Bacteria,Firmicutes,Bacilli,Lactobacillales,Streptococcaceae,Streptococcus,anginosus
  Bacteria,Gemmatimonadetes,Gemm-1,,,,
  Bacteria,Verrucomicrobia,Pedosphaerae,Pedosphaerales,Ellin517,,
  Bacteria,Bacteroidetes,Flavobacteriia,Flavobacteriales,Cryomorphaceae,,
  Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Micromonosporaceae,,
  Bacteria,Proteobacteria,Gammaproteobacteria,Alteromonadales,Alteromonadaceae,Glaciecola,
  Bacteria,Actinobacteria,Thermoleophilia,Solirubrobacterales,Patulibacteraceae,,
  Bacteria,Firmicutes,Clostridia,Clostridiales,Mogibacteriaceae,Anaerovorax,
  Bacteria,Proteobacteria,Betaproteobacteria,Methylophilales,Methylophilaceae,,
  Bacteria,Firmicutes,Bacilli,Lactobacillales,Lactobacillaceae,Lactobacillus,iners
  Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Nocardiaceae,,
  Bacteria,Proteobacteria,Deltaproteobacteria,,,,
  Bacteria,Acidobacteria,DA052,Ellin6513,,,
  Bacteria,Chloroflexi,Ellin6529,,,,
  Bacteria,Proteobacteria,Alphaproteobacteria,Ellin329,,,
  Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Pseudonocardiaceae,Amycolatopsis,
  Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Paraprevotellaceae,,
  Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,Comamonadaceae,Delftia,
  Bacteria,Proteobacteria,Gammaproteobacteria,Alteromonadales,Alteromonadaceae,Marinimicrobium,
  Bacteria,Proteobacteria,Gammaproteobacteria,Thiotrichales,Thiotrichaceae,,
  Bacteria,Actinobacteria,Coriobacteriia,Coriobacteriales,Coriobacteriaceae,Slackia,
  Bacteria,Proteobacteria,Alphaproteobacteria,Rhizobiales,Rhodobiaceae,,
  Bacteria,Bacteroidetes,Bacteroidia,Bacteroidales,Porphyromonadaceae,Dysgonomonas,
  Bacteria,Actinobacteria,Acidimicrobiia,Acidimicrobiales,koll13,,
  Bacteria,Planctomycetes,Planctomycetia,Planctomycetales,Planctomycetaceae,Planctomyces,
  Bacteria,Firmicutes,Clostridia,Clostridiales,Veillonellaceae,Veillonella,parvula
  Bacteria,Proteobacteria,Alphaproteobacteria,Rhizobiales,Beijerinckiaceae,,
  Bacteria,Proteobacteria,Epsilonproteobacteria,Campylobacterales,Campylobacteraceae,Arcobacter,cryaerophilus
  Bacteria,Proteobacteria,Gammaproteobacteria,Alteromonadales,Shewanellaceae,Shewanella,hanedai
  Bacteria,Firmicutes,Erysipelotrichi,Erysipelotrichales,Erysipelotrichaceae,Erysipelothrix,
  Bacteria,Chloroflexi,Thermomicrobia,Sphaerobacterales,,,
  Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Anaerostipes,
  Bacteria,Actinobacteria,Coriobacteriia,Coriobacteriales,Coriobacteriaceae,Adlercreutzia,
  Bacteria,Proteobacteria,Betaproteobacteria,Burkholderiales,Comamonadaceae,Lampropedia,
  Bacteria,Proteobacteria,Gammaproteobacteria,Aeromonadales,Aeromonadaceae,,
  Bacteria,Proteobacteria,Gammaproteobacteria,Alteromonadales,Alteromonadaceae,Marinobacter,hydrocarbonoclasticus
  Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Dermatophilaceae,,
  Bacteria,Firmicutes,Bacilli,Bacillales,Staphylococcaceae,Staphylococcus,epidermidis
  Bacteria,Chlorobi,BSV26,A89,,,
  Bacteria,Proteobacteria,Gammaproteobacteria,Enterobacteriales,Enterobacteriaceae,Plesiomonas,shigelloides
  Bacteria,Proteobacteria,Alphaproteobacteria,Rhizobiales,Xanthobacteraceae,,
  Bacteria,Proteobacteria,Gammaproteobacteria,Alteromonadales,OM60,Congregibacter,
  Bacteria,Firmicutes,Clostridia,Clostridiales,Tissierellaceae,Helcococcus,
  Bacteria,Proteobacteria,Gammaproteobacteria,Oceanospirillales,Oceanospirillaceae,,
  Bacteria,Firmicutes,Bacilli,Bacillales,Alicyclobacillaceae,Alicyclobacillus,
  Archaea,Crenarchaeota,Thaumarchaeota,Cenarchaeales,SAGMA-X,,
  Bacteria,Firmicutes,Clostridia,Clostridiales,Lachnospiraceae,Lachnobacterium,
  Bacteria,Bacteroidetes,Cytophagia,Cytophagales,Cytophagaceae,Rudanella,
  Bacteria,Thermi,Deinococci,Thermales,Thermaceae,Thermus,
  Bacteria,Firmicutes,Clostridia,Clostridiales,Peptococcaceae,Peptococcus,
  Bacteria,Firmicutes,Erysipelotrichi,Erysipelotrichales,Erysipelotrichaceae,RFN20,
  Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Micrococcaceae,Kocuria,palustris
  Bacteria,Proteobacteria,Alphaproteobacteria,Rhodospirillales,Rhodospirillaceae,Azospirillum,
  Bacteria,Actinobacteria,Acidimicrobiia,Acidimicrobiales,JdFBGBact,,
  Bacteria,Bacteroidetes,Flavobacteriia,Flavobacteriales,Blattabacteriaceae,,
  Bacteria,Thermi,Deinococci,Deinococcales,Deinococcaceae,Deinococcus,geothermalis
  Bacteria,Bacteroidetes,Flavobacteriia,Flavobacteriales,Cryomorphaceae,Fluviicola,
  Bacteria,Firmicutes,Clostridia,Clostridiales,Dehalobacteriaceae,,
  Bacteria,Firmicutes,Clostridia,Clostridiales,Tissierellaceae,,
  Bacteria,Proteobacteria,Alphaproteobacteria,Rhizobiales,Hyphomicrobiaceae,Rhodobium,
  Bacteria,Planctomycetes,OM190,CL500-15,,,
  Bacteria,Tenericutes,Mollicutes,RF39,,,
  Bacteria,Proteobacteria,Gammaproteobacteria,Alteromonadales,,,
  Bacteria,Bacteroidetes,Flavobacteriia,Flavobacteriales,Flavobacteriaceae,,
  Bacteria,FBP,,,,,
  Bacteria,Tenericutes,Mollicutes,Acholeplasmatales,Acholeplasmataceae,Acholeplasma,
  Bacteria,Nitrospirae,Nitrospira,Nitrospirales,Thermodesulfovibrionaceae,,
  Bacteria,Fusobacteria,Fusobacteriia,Fusobacteriales,Fusobacteriaceae,Cetobacterium,somerae
  Bacteria,Proteobacteria,Alphaproteobacteria,,,,
  Bacteria,Proteobacteria,Alphaproteobacteria,Rhodospirillales,Rhodospirillaceae,,
  Bacteria,Proteobacteria,Deltaproteobacteria,Myxococcales,0319-6G20,,
  Bacteria,Bacteroidetes,Saprospirae,Saprospirales,Chitinophagaceae,Chitinophaga,
  Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Intrasporangiaceae,Terracoccus,
  Bacteria,Bacteroidetes,Flavobacteriia,Flavobacteriales,Weeksellaceae,Chryseobacterium,
  Bacteria,Actinobacteria,Actinobacteria,Actinomycetales,Micrococcaceae,Arthrobacter,
OV: 241
OmniVegan: 243
SEX: 233

Set Differences with OTU ID





In [5]:



    


%%bash
if [ -f ../tmp/run1.txt ]; then rm ../tmp/run1.txt; fi
if [ -f ../tmp/run2.txt ]; then rm ../tmp/run2.txt; fi
if [ -f ../tmp/run3.txt ]; then rm ../tmp/run3.txt; fi
if [ -f ../tmp/data.txt ]; then rm ../tmp/data.txt; fi
if [ -f ../tmp/header.txt ]; then rm ../tmp/header.txt; fi
if [ -f ../tmp/pasted.txt ]; then rm ../tmp/pasted.txt; fi

cat ../outputs/AmericanGut-Gut-Diet-OV-Results-Fizzy-MIM.txt | awk -F $'\t' '{print $2}' | tail -n +2 > ../tmp/run1.txt
cat ../outputs/AmericanGut-Gut-Diet-OmniVegan-Results-Fizzy-MIM.txt | awk -F $'\t' '{print $2}' | tail -n +2 > ../tmp/run2.txt
cat ../outputs/AmericanGut-Gut-Sex-Results-Fizzy-MIM.txt | awk -F $'\t' '{print $2}' | tail -n +2 > ../tmp/run3.txt
echo 'OV OmniVegan SEX' | tr ' ' '\t' > ../tmp/header.txt
paste ../tmp/run1.txt ../tmp/run2.txt ../tmp/run3.txt | sed -e "s/.\_\_//g" > ../tmp/data.txt
cat ../tmp/header.txt ../tmp/data.txt > ../tmp/pasted.txt



    











In [6]:



    


import pandas as pd
from sets import Set 

df = pd.read_csv("../tmp/pasted.txt",sep="\t")
ov_set = Set(df["OV"])
omnivegan_set = Set(df["OmniVegan"])
sex_set = Set(df["SEX"])

uniques_all = ov_set.intersection(ov_set).intersection(sex_set)
uniques_sex_diet = ov_set.difference(sex_set)


print "Set Differences (Diet vs. Sex):", uniques_all
print "Len Differences (Diet vs. Sex):", len(uniques_all)
print "OV:",len(ov_set)
print "OmniVegan:",len(omnivegan_set)
print "SEX:",len(sex_set)



    


















    






Set Differences (Diet vs. Sex): Set([824876, 180995, 4329132, 523768, 183169, 177032, 268425, 183703, 174862, 4029584, 345176, 924547, 341271, 4426266, 190107, 188574, 2160415, 4380450, 292387, 177188, 317814, 194526, 173863, 319708, 197164, 175535, 289074, 2771891, 175145, 177343, 181953, 110046, 301253, 3392840, 591399, 337511, 190183, 1094991, 205904, 560465, 586453, 4481624, 4425669, 1646171, 4414044, 204126, 4473509, 4331360, 174818, 4324196, 190309, 366161, 4281639, 4303852, 361581, 4405104, 1945397, 187126, 197367, 174840, 535549, 177150])
Len Differences (Diet vs. Sex): 62
OV: 500
OmniVegan: 500
SEX: 500

















In [7]:



    


%%bash
if [ -f ../tmp/run1.txt ]; then rm ../tmp/run1.txt; fi
if [ -f ../tmp/run2.txt ]; then rm ../tmp/run2.txt; fi
if [ -f ../tmp/run3.txt ]; then rm ../tmp/run3.txt; fi
if [ -f ../tmp/data.txt ]; then rm ../tmp/data.txt; fi
if [ -f ../tmp/header.txt ]; then rm ../tmp/header.txt; fi
if [ -f ../tmp/pasted.txt ]; then rm ../tmp/pasted.txt; fi

cat ../outputs/AmericanGut-Gut-Diet-OmniVegan-Results-Fizzy-MIM.txt | awk -F $'\t' '{print $2}' | tail -n +2 > ../tmp/run1.txt
cat ../outputs/AmericanGut-Gut-Diet-OmniVegan-Results-NPFS-MIM.txt | awk -F $'\t' '{print $2}' | tail -n +2 > ../tmp/run2.txt
echo '' | tr ' ' '\t' > ../tmp/header.txt
paste ../tmp/run1.txt ../tmp/run2.txt ../tmp/run3.txt | sed -e "s/.\_\_//g" > ../tmp/data.txt
cat ../tmp/header.txt ../tmp/data.txt > ../tmp/pasted.txt



    


















    






paste: ../tmp/run3.txt: No such file or directory

















In [ ]:

Content source: gditzler/Fizzy-Benchmarks

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