Collating for real with CollateX. Files

In [1]:

    

from collatex import *


    

In [2]:

    

collation = Collation()


    

In [3]:

    

witness_1859 = open( "../data/Darwin/darwin1859_par1.txt", encoding='utf-8' ).read()
witness_1860 = open( "../data/Darwin/darwin1860_par1.txt", encoding='utf-8' ).read()
witness_1861 = open( "../data/Darwin/darwin1861_par1.txt", encoding='utf-8' ).read()
witness_1866 = open( "../data/Darwin/darwin1866_par1.txt", encoding='utf-8' ).read()
witness_1869 = open( "../data/Darwin/darwin1869_par1.txt", encoding='utf-8' ).read()
witness_1872 = open( "../data/Darwin/darwin1872_par1.txt", encoding='utf-8' ).read()


    

In [4]:

    

print(witness_1859)


    

    




WHEN we look to the individuals of the same variety or sub-variety of our older cultivated plants and animals, one of the first points which strikes us, is, that they generally differ much more from each other, than do the individuals of any one species or variety in a state of nature. When we reflect on the vast diversity of the plants and animals which have been cultivated, and which have varied during all ages under the most different climates and treatment, I think we are driven to conclude that this greater variability is simply due to our domestic productions having been raised under conditions of life not so uniform as, and somewhat different from, those to which the parent-species have been exposed under nature. There is, also, I think, some probability in the view propounded by Andrew Knight, that this variability may be partly connected with excess of food. It seems pretty clear that organic beings must be exposed during several generations to the new conditions of life to cause any appreciable amount of variation; and that when the organisation has once begun to vary, it generally continues to vary for many generations. No case is on record of a variable being ceasing to be variable under cultivation. Our oldest cultivated plants, such as wheat, still often yield new varieties: our oldest domesticated animals are still capable of rapid improvement or modification.

In [5]:

    

print(witness_1872)


    

    




Causes of Variability. WHEN we compare the individuals of the same variety or sub-variety of our older cultivated plants and animals, one of the first points which strikes us is, that they generally differ more from each other than do the individuals of any one species or variety in a state of nature. And if we reflect on the vast diversity of the plants and animals which have been cultivated, and which have varied during all ages under the most different climates and treatment, we are driven to conclude that this great variability is due to our domestic productions having been raised under conditions of life not so uniform as, and somewhat different from, those to which the parent-species had been exposed under nature. There is, also, some probability in the view propounded by Andrew Knight, that this variability may be partly connected with excess of food. It seems clear that organic beings must be exposed during several generations to new conditions to cause any great amount of variation; and that, when the organisation has once begun to vary, it generally continues varying for many generations. No case is on record of a variable organism ceasing to vary under cultivation. Our oldest cultivated plants, such as wheat, still yield new varieties: our oldest domesticated animals are still capable of rapid improvement or modification.

In [6]:

    

collation.add_plain_witness( "1859", witness_1859 )
collation.add_plain_witness( "1860", witness_1860 )
collation.add_plain_witness( "1861", witness_1861 )
collation.add_plain_witness( "1866", witness_1866 )
collation.add_plain_witness( "1869", witness_1869 )
collation.add_plain_witness( "1872", witness_1872 )


    

In [7]:

    

alignment_table = collate(collation, layout='vertical', output="html")
print(alignment_table)


    

    






    

        
1859
        
1860
        
1861
        
1866
        
1869
        
1872
    
    

        
-
        
-
        
-
        
Causes of
Variability.
        
Causes of
Variability.
        
Causes of
Variability.
    
    

        
WHEN we
        
WHEN we
        
WHEN we
        
WHEN we
        
WHEN we
        
WHEN we
    
    

        
look to
        
look to
        
look to
        
look to
        
compare
        
compare
    
    

        
the individuals of
the same variety or
sub-variety of our
older cultivated
plants and animals,
one of the first
points which strikes
us
        
the individuals of
the same variety or
sub-variety of our
older cultivated
plants and animals,
one of the first
points which strikes
us
        
the individuals of
the same variety or
sub-variety of our
older cultivated
plants and animals,
one of the first
points which strikes
us
        
the individuals of
the same variety or
sub-variety of our
older cultivated
plants and animals,
one of the first
points which strikes
us
        
the individuals of
the same variety or
sub-variety of our
older cultivated
plants and animals,
one of the first
points which strikes
us
        
the individuals of
the same variety or
sub-variety of our
older cultivated
plants and animals,
one of the first
points which strikes
us
    
    

        
,
        
,
        
,
        
,
        
-
        
-
    
    

        
is, that they
generally differ
        
is, that they
generally differ
        
is, that they
generally differ
        
is, that they
generally differ
        
is, that they
generally differ
        
is, that they
generally differ
    
    

        
much
        
-
        
-
        
-
        
-
        
-
    
    

        
more
        
more
        
more
        
more
        
-
        
more
    
    

        
from each other
        
from each other
        
from each other
        
from each other
        
from each other
        
from each other
    
    

        
,
        
-
        
-
        
-
        
more
        
-
    
    

        
than do the
individuals of any
one species or
variety in a state
of nature.
        
than do the
individuals of any
one species or
variety in a state
of nature.
        
than do the
individuals of any
one species or
variety in a state
of nature.
        
than do the
individuals of any
one species or
variety in a state
of nature.
        
than do the
individuals of any
one species or
variety in a state
of nature.
        
than do the
individuals of any
one species or
variety in a state
of nature.
    
    

        
When
        
When
        
When
        
When
        
And if
        
And if
    
    

        
we reflect on the
vast diversity of
the plants and
animals which have
been cultivated, and
which have varied
during all ages
under the most
different climates
and treatment,
        
we reflect on the
vast diversity of
the plants and
animals which have
been cultivated, and
which have varied
during all ages
under the most
different climates
and treatment,
        
we reflect on the
vast diversity of
the plants and
animals which have
been cultivated, and
which have varied
during all ages
under the most
different climates
and treatment,
        
we reflect on the
vast diversity of
the plants and
animals which have
been cultivated, and
which have varied
during all ages
under the most
different climates
and treatment,
        
we reflect on the
vast diversity of
the plants and
animals which have
been cultivated, and
which have varied
during all ages
under the most
different climates
and treatment,
        
we reflect on the
vast diversity of
the plants and
animals which have
been cultivated, and
which have varied
during all ages
under the most
different climates
and treatment,
    
    

        
I think
        
I think
        
I think
        
I think
        
-
        
-
    
    

        
we are driven to
conclude that this
        
we are driven to
conclude that this
        
we are driven to
conclude that this
        
we are driven to
conclude that this
        
we are driven to
conclude that this
        
we are driven to
conclude that this
    
    

        
greater
        
great
        
great
        
great
        
great
        
great
    
    

        
variability is
        
variability is
        
variability is
        
variability is
        
variability is
        
variability is
    
    

        
simply
        
simply
        
simply
        
simply
        
-
        
-
    
    

        
due to our domestic
productions having
been raised under
conditions of life
not so uniform as,
and somewhat
different from,
those to which the
parent-species
        
due to our domestic
productions having
been raised under
conditions of life
not so uniform as,
and somewhat
different from,
those to which the
parent-species
        
due to our domestic
productions having
been raised under
conditions of life
not so uniform as,
and somewhat
different from,
those to which the
parent-species
        
due to our domestic
productions having
been raised under
conditions of life
not so uniform as,
and somewhat
different from,
those to which the
parent-species
        
due to our domestic
productions having
been raised under
conditions of life
not so uniform as,
and somewhat
different from,
those to which the
parent-species
        
due to our domestic
productions having
been raised under
conditions of life
not so uniform as,
and somewhat
different from,
those to which the
parent-species
    
    

        
have
        
have
        
have
        
have
        
had
        
had
    
    

        
been exposed under
nature. There is
        
been exposed under
nature. There is
        
been exposed under
nature. There is
        
been exposed under
nature. There is
        
been exposed under
nature. There is
        
been exposed under
nature. There is
    
    

        
,
        
-
        
-
        
-
        
-
        
,
    
    

        
also
        
also
        
also
        
also
        
also
        
also
    
    

        
, I think
        
, I think
        
, I think
        
, I think
        
, I think
        
-
    
    

        
, some probability
in the view
propounded by Andrew
Knight, that this
variability may be
partly connected
with excess of food.
It seems
        
, some probability
in the view
propounded by Andrew
Knight, that this
variability may be
partly connected
with excess of food.
It seems
        
, some probability
in the view
propounded by Andrew
Knight, that this
variability may be
partly connected
with excess of food.
It seems
        
, some probability
in the view
propounded by Andrew
Knight, that this
variability may be
partly connected
with excess of food.
It seems
        
, some probability
in the view
propounded by Andrew
Knight, that this
variability may be
partly connected
with excess of food.
It seems
        
, some probability
in the view
propounded by Andrew
Knight, that this
variability may be
partly connected
with excess of food.
It seems
    
    

        
pretty
        
pretty
        
pretty
        
pretty
        
-
        
-
    
    

        
clear that organic
beings must be
exposed during
several generations
to
        
clear that organic
beings must be
exposed during
several generations
to
        
clear that organic
beings must be
exposed during
several generations
to
        
clear that organic
beings must be
exposed during
several generations
to
        
clear that organic
beings must be
exposed during
several generations
to
        
clear that organic
beings must be
exposed during
several generations
to
    
    

        
the
        
the
        
the
        
the
        
-
        
-
    
    

        
new conditions
        
new conditions
        
new conditions
        
new conditions
        
new conditions
        
new conditions
    
    

        
of life
        
of life
        
of life
        
of life
        
-
        
-
    
    

        
to cause any
        
to cause any
        
to cause any
        
to cause any
        
to cause any
        
to cause any
    
    

        
appreciable
        
appreciable
        
appreciable
        
appreciable
        
appreciable
        
great
    
    

        
amount of variation;
and that
        
amount of variation;
and that
        
amount of variation;
and that
        
amount of variation;
and that
        
amount of variation;
and that
        
amount of variation;
and that
    
    

        
-
        
-
        
-
        
,
        
,
        
,
    
    

        
when the
organisation has
once begun to vary,
it generally
        
when the
organisation has
once begun to vary,
it generally
        
when the
organisation has
once begun to vary,
it generally
        
when the
organisation has
once begun to vary,
it generally
        
when the
organisation has
once begun to vary,
it generally
        
when the
organisation has
once begun to vary,
it generally
    
    

        
continues
        
continues
        
continues
        
continues
        
con- tinues
        
continues
    
    

        
to vary
        
to vary
        
to vary
        
to vary
        
varying
        
varying
    
    

        
for many
generations. No case
is on record of a
variable
        
for many
generations. No case
is on record of a
variable
        
for many
generations. No case
is on record of a
variable
        
for many
generations. No case
is on record of a
variable
        
for many
generations. No case
is on record of a
variable
        
for many
generations. No case
is on record of a
variable
    
    

        
being
        
being
        
being
        
being
        
organism
        
organism
    
    

        
ceasing to
        
ceasing to
        
ceasing to
        
ceasing to
        
ceasing to
        
ceasing to
    
    

        
be variable
        
be variable
        
be variable
        
be variable
        
vary
        
vary
    
    

        
under cultivation.
Our oldest
cultivated plants,
such as wheat, still
        
under cultivation.
Our oldest
cultivated plants,
such as wheat, still
        
under cultivation.
Our oldest
cultivated plants,
such as wheat, still
        
under cultivation.
Our oldest
cultivated plants,
such as wheat, still
        
under cultivation.
Our oldest
cultivated plants,
such as wheat, still
        
under cultivation.
Our oldest
cultivated plants,
such as wheat, still
    
    

        
often
        
often
        
often
        
often
        
-
        
-
    
    

        
yield new varieties:
our oldest
domesticated animals
are still capable of
rapid improvement or
modification.
        
yield new varieties:
our oldest
domesticated animals
are still capable of
rapid improvement or
modification.
        
yield new varieties:
our oldest
domesticated animals
are still capable of
rapid improvement or
modification.
        
yield new varieties:
our oldest
domesticated animals
are still capable of
rapid improvement or
modification.
        
yield new varieties:
our oldest
domesticated animals
are still capable of
rapid improvement or
modification.
        
yield new varieties:
our oldest
domesticated animals
are still capable of
rapid improvement or
modification.
    







    




None

In [8]:

    

from collatex import *
collation = Collation()
witness_USA = open( "../data/Woolf/Lighthouse-1/Lighthouse-1-USA.txt", encoding='utf-8' ).read()
witness_UK = open( "../data/Woolf/Lighthouse-1/Lighthouse-1-UK.txt", encoding='utf-8' ).read()
witness_EM = open( "../data/Woolf/Lighthouse-1/Lighthouse-1-EM.txt", encoding='utf-8' ).read()
collation.add_plain_witness( "USA", witness_USA )
collation.add_plain_witness( "UK", witness_UK )
collation.add_plain_witness( "EM", witness_EM )
alignment_table = collate(collation, output='html2')


    

    






 

  
USA
  
UK
  
EM
 
 

  
When she looked in
the glass and saw
her hair grey, her
cheek sunk, at
fifty, she thought,
possibly she might
have managed things
better—her husband;
money; his books.
But for her own part
she would never for
a single second
regret her decision,
evade difficulties,
or slur over duties.
She was now
formidable to
behold, and it was
only in silence,
looking up from
their plates, after
she had spoken so
severely about
Charles Tansley,
that her daughters
  
When she looked in
the glass and saw
her hair grey, her
cheek sunk, at
fifty, she thought,
possibly she might
have managed things
better—her husband;
money; his books.
But for her own part
she would never for
a single second
regret her decision,
evade difficulties,
or slur over duties.
She was now
formidable to
behold, and it was
only in silence,
looking up from
their plates, after
she had spoken so
severely about
Charles Tansley,
that her daughters
  
When she looked in
the glass and saw
her hair grey, her
cheek sunk, at
fifty, she thought,
possibly she might
have managed things
better—her husband;
money; his books.
But for her own part
she would never for
a single second
regret her decision,
evade difficulties,
or slur over duties.
She was now
formidable to
behold, and it was
only in silence,
looking up from
their plates, after
she had spoken so
severely about
Charles Tansley,
that her daughters
 
 

  
,
  
—
  
—
 
 

  
Prue, Nancy,
Rose—could sport
with infidel ideas
which they had
brewed for
themselves of a life
different from hers;
in Paris, perhaps; a
wilder life; not
always taking care
of some man or
other; for there was
in all their minds a
mute questioning of
deference and
chivalry, of the
Bank of England and
the Indian Empire,
of ringed fingers
and lace, though to
them all there was
something in this of
the essence of
beauty, which called
out the manliness in
their girlish
hearts, and made
them, as they sat at
table beneath their
mother’s eyes,
honour her strange
severity, her
extreme courtesy,
like a
  
Prue, Nancy,
Rose—could sport
with infidel ideas
which they had
brewed for
themselves of a life
different from hers;
in Paris, perhaps; a
wilder life; not
always taking care
of some man or
other; for there was
in all their minds a
mute questioning of
deference and
chivalry, of the
Bank of England and
the Indian Empire,
of ringed fingers
and lace, though to
them all there was
something in this of
the essence of
beauty, which called
out the manliness in
their girlish
hearts, and made
them, as they sat at
table beneath their
mother’s eyes,
honour her strange
severity, her
extreme courtesy,
like a
  
Prue, Nancy,
Rose—could sport
with infidel ideas
which they had
brewed for
themselves of a life
different from hers;
in Paris, perhaps; a
wilder life; not
always taking care
of some man or
other; for there was
in all their minds a
mute questioning of
deference and
chivalry, of the
Bank of England and
the Indian Empire,
of ringed fingers
and lace, though to
them all there was
something in this of
the essence of
beauty, which called
out the manliness in
their girlish
hearts, and made
them, as they sat at
table beneath their
mother’s eyes,
honour her strange
severity, her
extreme courtesy,
like a
 
 

  
Queen
  
Queen
  
queen
 
 

  
’s raising from the
mud
  
’s raising from the
mud
  
’s raising from the
mud
 
 

  
to wash
  
-
  
-
 
 

  
a beggar
  
a beggar
  
a beggar
 
 

  
’
  
’
  
'
 
 

  
s dirty foot
  
s dirty foot
  
s dirty foot
 
 

  
-
  
and washing
  
and washing
 
 

  
-
  
-
  
it
 
 

  
, when she thus
admonished them so
very severely about
that wretched
atheist who had
chased them
  
, when she thus
admonished them so
very severely about
that wretched
atheist who had
chased them
  
, when she thus
admonished them so
very severely about
that wretched
atheist who had
chased them
 
 

  
-
  
-
  
to
 
 

  
—or, speaking
accurately, been
invited to stay with
them
  
—or, speaking
accurately, been
invited to stay with
them
  
—or, speaking
accurately, been
invited to stay with
them
 
 

  
-
  
-
  
in
 
 

  
—
  
—
  
—
 
 

  
in
  
in
  
-
 
 

  
the
  
the
  
the
 
 

  
Isles
  
Isle
  
Isle
 
 

  
of Skye.
  
of Skye.
  
of Skye.
 

In [10]:

    

from collatex import *
collation = Collation()
witness_1707 = open( "../data/sonnet/Lope_soneto_FR_1707.txt", encoding='utf-8' ).read()
witness_1822 = open( "../data/sonnet/Lope_soneto_FR_1822.txt", encoding='utf-8' ).read()
collation.add_plain_witness( "witness1707", witness_1707 )
collation.add_plain_witness( "witness1822", witness_1822 )
alignment_table = collate(collation, output='html2')


    

    






 

  
witness1707
  
witness1822
 
 

  
 Doris, qui sait
qu'aux vers
quelquefois je me
plais,  Me demande
un sonnet
  
 Doris, qui sait
qu'aux vers
quelquefois je me
plais, Me demande un
sonnet
 
 

  
;
  
,
 
 

  
et je m'en
désespère:  Quatorze
vers, grand Dieu!
  
et je m'en
désespère: Quatorze
vers, grand Dieu!
 
 

  
le
  
Le
 
 

  
moyen de les faire
  
moyen de les faire
 
 

  
!
  
?
 
 

  
En voilà cependant
déjà quatre de
faits.  Je ne
pouvais d'abord
trouver de rime
  
En voilà cependant
déjà quatre de
faits.  Je ne
pouvais d'abord
trouver de rime
 
 

  
;
  
,
 
 

  
mais
  
mais
 
 

  
,
  
-
 
 

  
En faisant on
apprend à se tirer
d'affaire
  
En faisant on
apprend à se tirer
d'affaire
 
 

  
:
  
.
 
 

  
Poursuivons
  
Poursuivons
 
 

  
,
  
:
 
 

  
les quatrains ne
m'étonneront guère
  
les quatrains ne
m'étonneront guère
 
 

  
,
  
-
 
 

  
Si du premier tercet
je puis faire les
frais.   Je commence
au hasard
  
Si du premier tercet
je puis faire les
frais.  Je commence
au hasard
 
 

  
;
  
,
 
 

  
et
  
et
 
 

  
-
  
,
 
 

  
si je ne m'abuse,
Je n'ai
  
si je ne m'abuse,
Je n'ai
 
 

  
pas
  
point
 
 

  
commencé
  
commencé
 
 

  
,
  
-
 
 

  
sans l'aveu de
  
sans l'aveu de
 
 

  
la
  
ma
 
 

  
muse,  Puisqu'en si
peu de temps je
  
muse, Puisqu'en si
peu de temps je
 
 

  
m'en
  
me
 
 

  
tire
  
tire
 
 

  
si
  
du
 
 

  
net.  J'entame le
second
  
net.       J'entame
le second
 
 

  
;
  
,
 
 

  
et ma joie est
extrême;  Car des
vers commandés
j'achève le
treizième;  Comptez
s'ils sont quatorze
  
et ma joie est
extrême;  Car des
vers commandés
j'achève le
treizième;  Comptez
s'ils sont quatorze
 
 

  
;
  
,
 
 

  
et voilà le sonnet.
  
et voilà le sonnet.