In [43]:
# Reload when code changed:
%load_ext autoreload
%reload_ext autoreload
%autoreload 2
%pwd
import sys
import os
path = "../"
sys.path.append(path)
#os.path.abspath("../")
print(os.path.abspath(path))
The autoreload extension is already loaded. To reload it, use:
%reload_ext autoreload
D:\git\ekostat_calculator
In [44]:
import os
import core
import logging
import importlib
importlib.reload(core)
try:
logging.shutdown()
importlib.reload(logging)
except:
pass
import pandas as pd
import numpy as np
import json
import time
from event_handler import EventHandler
from event_handler import get_list_from_interval
print(core.__file__)
pd.__version__
..\core\__init__.py
Out[44]:
'0.20.3'
In [ ]:
In [45]:
user_id_1 = 'user_1'
user_id_2 = 'user_2'
user_1_ws_1 = 'mw1'
print(path)
paths = {'user_id': user_id_1,
'workspace_directory': 'D:/git/ekostat_calculator/workspaces',
'resource_directory': path + '/resources',
'log_directory': path + '/log',
'test_data_directory': path + '/test_data',
'temp_directory': path + '/temp',
'cache_directory': path + '/cache'}
ekos = EventHandler(**paths)
ekos.test_timer()
2018-09-20 22:09:30,646 logger.py 85 add_log DEBUG
2018-09-20 22:09:30,651 logger.py 86 add_log DEBUG ========================================================================================================================
2018-09-20 22:09:30,656 logger.py 87 add_log DEBUG ### Log added for log_id "event_handler" at locaton: ..\log\main_event_handler.log
2018-09-20 22:09:30,666 logger.py 88 add_log DEBUG ------------------------------------------------------------------------------------------------------------------------
2018-09-20 22:09:30,678 event_handler.py 117 __init__ DEBUG Start EventHandler: event_handler
2018-09-20 22:09:30,686 event_handler.py 152 _load_mapping_objects DEBUG Loading mapping files from pickle file.
../
====================================================================================================
event_handler
..//log
main
----------------------------------------------------------------------------------------------------
2018-09-20 22:09:31,935 event_handler.py 128 __init__ DEBUG Time for mapping: 1.2490715980529785
2018-09-20 22:09:31,980 event_handler.py 133 __init__ DEBUG Time for initiating EventHandler: 1.3390767574310303
2018-09-20 22:09:31,985 event_handler.py 50 f DEBUG Start: "test_timer"
2018-09-20 22:09:33,077 event_handler.py 54 f DEBUG Stop: "test_timer". Time for running method was 1.084061861038208
test
In [4]:
ekos.mapping_objects['quality_element'].get_indicator_list_for_quality_element('secchi')
Out[4]:
['indicator_secchi']
In [5]:
def update_workspace_uuid_in_test_requests(workspace_alias='New test workspace'):
ekos = EventHandler(**paths)
workspace_uuid = ekos.get_unique_id_for_alias(workspace_alias=workspace_alias)
if workspace_uuid:
print('Updating user {} with uuid: {}'.format(user_id_1, workspace_uuid))
print('-'*70)
ekos.update_workspace_uuid_in_test_requests(workspace_uuid)
else:
print('No workspaces for user: {}'.format(user_id_1))
def update_subset_uuid_in_test_requests(workspace_alias='New test workspace',
subset_alias=False):
ekos = EventHandler(**paths)
workspace_uuid = ekos.get_unique_id_for_alias(workspace_alias=workspace_alias)
if workspace_uuid:
ekos.load_workspace(workspace_uuid)
subset_uuid = ekos.get_unique_id_for_alias(workspace_alias=workspace_alias, subset_alias=subset_alias)
print('Updating user {} with workspace_uuid {} and subset_uuid {}'.format(user_id_1, workspace_uuid, subset_uuid))
print(workspace_uuid, subset_uuid)
print('-'*70)
ekos.update_subset_uuid_in_test_requests(subset_uuid=subset_uuid)
else:
print('No workspaces for user: {}'.format(user_id_1))
def print_boolean_structure(workspace_uuid):
workspace_object = ekos.get_workspace(unique_id=workspace_uuid)
workspace_object.index_handler.print_boolean_keys()
In [6]:
# update_workspace_uuid_in_test_requests()
In [7]:
t0 = time.time()
ekos = EventHandler(**paths)
request = ekos.test_requests['request_workspace_add_1']
response_workspace_add = ekos.request_workspace_add(request)
ekos.write_test_response('request_workspace_add_1', response_workspace_add)
# request = ekos.test_requests['request_workspace_add_2']
# response_workspace_add = ekos.request_workspace_add(request)
# ekos.write_test_response('request_workspace_add_2', response_workspace_add)
print('-'*50)
print('Time for request: {}'.format(time.time()-t0))
2018-09-20 21:08:21,463 event_handler.py 117 __init__ DEBUG Start EventHandler: event_handler
2018-09-20 21:08:21,467 event_handler.py 152 _load_mapping_objects DEBUG Loading mapping files from pickle file.
2018-09-20 21:08:22,390 event_handler.py 128 __init__ DEBUG Time for mapping: 0.9230527877807617
2018-09-20 21:08:22,431 event_handler.py 133 __init__ DEBUG Time for initiating EventHandler: 0.9680554866790771
2018-09-20 21:08:22,447 event_handler.py 50 f DEBUG Start: "request_workspace_add"
2018-09-20 21:08:22,453 event_handler.py 4327 request_workspace_add DEBUG Start: request_workspace_add
2018-09-20 21:08:22,484 event_handler.py 422 copy_workspace DEBUG Trying to copy workspace "default_workspace". Copy has alias "New test workspace"
2018-09-20 21:08:22,631 event_handler.py 3053 load_workspace DEBUG Trying to load new workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace"
¤ New test workspace
2018-09-20 21:08:22,756 logger.py 85 add_log DEBUG
2018-09-20 21:08:22,762 logger.py 86 add_log DEBUG ========================================================================================================================
2018-09-20 21:08:22,767 logger.py 87 add_log DEBUG ### Log added for log_id "default_subset" at locaton: D:\git\ekostat_calculator\workspaces\d347d3bf-3f26-42f3-b261-d48253f9ba26\log\subset_default_subset.log
2018-09-20 21:08:22,772 logger.py 88 add_log DEBUG ------------------------------------------------------------------------------------------------------------------------
====================================================================================================
default_subset
D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/log
subset
----------------------------------------------------------------------------------------------------
2018-09-20 21:08:23,126 logger.py 85 add_log DEBUG
2018-09-20 21:08:23,132 logger.py 86 add_log DEBUG ========================================================================================================================
2018-09-20 21:08:23,138 logger.py 87 add_log DEBUG ### Log added for log_id "d347d3bf-3f26-42f3-b261-d48253f9ba26" at locaton: D:\git\ekostat_calculator\workspaces\d347d3bf-3f26-42f3-b261-d48253f9ba26\log\workspace_d347d3bf-3f26-42f3-b261-d48253f9ba26.log
2018-09-20 21:08:23,141 logger.py 88 add_log DEBUG ------------------------------------------------------------------------------------------------------------------------
2018-09-20 21:08:23,146 event_handler.py 3071 load_workspace INFO Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace loaded."
2018-09-20 21:08:23,151 event_handler.py 54 f DEBUG Stop: "request_workspace_add". Time for running method was 0.6980397701263428
====================================================================================================
d347d3bf-3f26-42f3-b261-d48253f9ba26
D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/log
workspace
----------------------------------------------------------------------------------------------------
--------------------------------------------------
Time for request: 1.6930968761444092
In [8]:
update_workspace_uuid_in_test_requests()
2018-09-20 21:09:12,351 event_handler.py 117 __init__ DEBUG Start EventHandler: event_handler
2018-09-20 21:09:12,354 event_handler.py 152 _load_mapping_objects DEBUG Loading mapping files from pickle file.
2018-09-20 21:09:13,160 event_handler.py 128 __init__ DEBUG Time for mapping: 0.8060462474822998
2018-09-20 21:09:13,195 event_handler.py 133 __init__ DEBUG Time for initiating EventHandler: 0.845048189163208
Updating user user_1 with uuid: d347d3bf-3f26-42f3-b261-d48253f9ba26
----------------------------------------------------------------------
In [9]:
# ekos = EventHandler(**paths)
# # When copying data the first time all sources has status=0, i.e. no data will be loaded.
# request = ekos.test_requests['request_workspace_import_default_data']
# response_import_data = ekos.request_workspace_import_default_data(request)
# ekos.write_test_response('request_workspace_import_default_data', response_import_data)
In [10]:
ekos = EventHandler(**paths)
request = ekos.test_requests['request_sharkweb_import']
response_sharkweb_import = ekos.request_sharkweb_import(request)
ekos.write_test_response('request_sharkweb_import', response_sharkweb_import)
2018-09-20 21:09:17,366 event_handler.py 117 __init__ DEBUG Start EventHandler: event_handler
2018-09-20 21:09:17,369 event_handler.py 152 _load_mapping_objects DEBUG Loading mapping files from pickle file.
2018-09-20 21:09:18,234 event_handler.py 128 __init__ DEBUG Time for mapping: 0.8640494346618652
2018-09-20 21:09:18,270 event_handler.py 133 __init__ DEBUG Time for initiating EventHandler: 0.9040517807006836
2018-09-20 21:09:18,276 event_handler.py 50 f DEBUG Start: "request_sharkweb_import"
2018-09-20 21:09:18,333 event_handler.py 3053 load_workspace DEBUG Trying to load new workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace"
=== d347d3bf-3f26-42f3-b261-d48253f9ba26
{'year_from': 2007, 'year_to': 2012, 'datatype': 'Phytoplankton', 'water_district_list': [], 'type_area_list': [], 'svar_sea_area_list': ['Krabbfjärden', 'Gullmarn centralbassäng', 'Gussöfjärden', 'Örefjärden', 'Gaviksfjärden'], 'encoding': 'utf8', 'lineend': 'windows', 'delimiters': 'point-tab', 'sample_table_view': 'sample_col_phytoplankton', 'parameter': 'Biovolume concentration', 'headerlang': 'internal'}
2018-09-20 21:09:18,743 event_handler.py 3071 load_workspace INFO Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace loaded."
DEBUG: Status: 200
DEBUG: Header: application/json; charset=utf-8
DEBUG: Encoding: utf-8
DEBUG: Status: 200
DEBUG: Header: application/json; charset=utf-8
DEBUG: Encoding: utf-8
DEBUG: Status: 200
DEBUG: Header: application/json; charset=utf-8
DEBUG: Encoding: utf-8
DEBUG: Status: 200
DEBUG: Header:
2018-09-20 21:09:36,457 event_handler.py 3064 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
application/octet-stream; charset=utf-8
DEBUG: Encoding: utf-8
datatype Phytoplankton
Done
=== d347d3bf-3f26-42f3-b261-d48253f9ba26
{'year_from': 2007, 'year_to': 2012, 'datatype': 'Chlorophyll', 'water_district_list': [], 'type_area_list': [], 'svar_sea_area_list': ['Krabbfjärden', 'Gullmarn centralbassäng', 'Gussöfjärden', 'Örefjärden', 'Gaviksfjärden'], 'encoding': 'utf8', 'lineend': 'windows', 'delimiters': 'point-tab', 'sample_table_view': 'sample_col_chlorophyll', 'parameter': 'Chlorophyll-a', 'headerlang': 'internal'}
DEBUG: Status: 200
DEBUG: Header: application/json; charset=utf-8
DEBUG: Encoding: utf-8
DEBUG: Status: 200
DEBUG: Header: application/json; charset=utf-8
DEBUG: Encoding: utf-8
DEBUG: Status: 200
DEBUG: Header: application/json; charset=utf-8
DEBUG: Encoding: utf-8
DEBUG: Status: 200
DEBUG: Header: application/octet-stream; charset=utf-8
DEBUG: Encoding: utf-8
datatype Chlorophyll
Done
2018-09-20 21:09:38,391 event_handler.py 3064 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
=== d347d3bf-3f26-42f3-b261-d48253f9ba26
{'year_from': 2007, 'year_to': 2012, 'datatype': 'Physical and Chemical', 'water_district_list': [], 'type_area_list': [], 'svar_sea_area_list': ['Krabbfjärden', 'Gullmarn centralbassäng', 'Gussöfjärden', 'Örefjärden', 'Gaviksfjärden'], 'encoding': 'utf8', 'lineend': 'windows', 'delimiters': 'point-tab', 'sample_table_view': 'sample_col_physicalchemical_columnparams', 'parameter': None, 'headerlang': 'internal'}
DEBUG: Status: 200
DEBUG: Header: application/json; charset=utf-8
DEBUG: Encoding: utf-8
DEBUG: Status: 200
DEBUG: Header: application/json; charset=utf-8
DEBUG: Encoding: utf-8
DEBUG: Status: 200
DEBUG: Header: application/json; charset=utf-8
DEBUG: Encoding: utf-8
2018-09-20 21:09:42,952 event_handler.py 54 f DEBUG Stop: "request_sharkweb_import". Time for running method was 24.668410778045654
DEBUG: Status: 200
DEBUG: Header: application/octet-stream; charset=utf-8
DEBUG: Encoding: utf-8
datatype Physical and Chemical
Done
In [11]:
ekos.data_params
Out[11]:
{'adv_check_status': '',
'adv_checked_by_list': '',
'adv_dataset_name': '',
'adv_dataset_name_option': '',
'adv_datatype_list': '',
'adv_deliverer_list': '',
'adv_max_depth': '',
'adv_min_depth': '',
'adv_orderer_list': '',
'adv_parameter_list': '',
'adv_project_list': '',
'adv_quality_flag_list': '',
'adv_red_list_category': '',
'bounds': '',
'county_list': '',
'datatype': 'Physical and Chemical',
'delimiters': 'point-tab',
'economic_zone': '',
'encoding': 'utf8',
'headerlang': 'internal',
'helcom_ospar': '',
'lineend': 'windows',
'month_list': '',
'municipality_list': '',
'parameter': None,
'sample_table_view': 'sample_col_physicalchemical_columnparams',
'sea_basin': '',
'station_name': '',
'station_name_option': '',
'svar_sea_area_list': '',
'taxon_name': '',
'taxon_name_option': '',
'type_area_list': '',
'water_category': '',
'water_district_list': 'S%C3%B6dra%20%C3%96stersj%C3%B6ns%20vattendistrikt',
'year_from': 2011,
'year_to': 2016}
In [12]:
ekos.selection_dicts
Out[12]:
{'Physical and Chemical': {'datatype': 'Physical and Chemical',
'delimiters': 'point-tab',
'encoding': 'utf8',
'headerlang': 'internal',
'lineend': 'windows',
'parameter': None,
'sample_table_view': 'sample_col_physicalchemical_columnparams',
'svar_sea_area_list': [],
'type_area_list': [],
'water_district_list': ['Södra Östersjöns vattendistrikt'],
'year_from': 2011,
'year_to': 2016}}
In [13]:
# ekos = EventHandler(**paths)
# ekos.mapping_objects['sharkweb_mapping'].df
In [11]:
ekos = EventHandler(**paths)
request = ekos.test_requests['request_workspace_data_sources_list']
response = ekos.request_workspace_data_sources_list(request)
ekos.write_test_response('request_workspace_data_sources_list', response)
request = response
request['data_sources'][0]['status'] = True
request['data_sources'][1]['status'] = True
request['data_sources'][2]['status'] = True
# request['data_sources'][3]['status'] = True
# request['data_sources'][4]['status'] = True
# Edit data source
response = ekos.request_workspace_data_sources_edit(request)
ekos.write_test_response('request_workspace_data_sources_edit', response)
2018-09-20 21:10:45,712 event_handler.py 117 __init__ DEBUG Start EventHandler: event_handler
2018-09-20 21:10:45,715 event_handler.py 152 _load_mapping_objects DEBUG Loading mapping files from pickle file.
2018-09-20 21:10:46,605 event_handler.py 128 __init__ DEBUG Time for mapping: 0.8900508880615234
2018-09-20 21:10:46,642 event_handler.py 133 __init__ DEBUG Time for initiating EventHandler: 0.9310534000396729
2018-09-20 21:10:46,649 event_handler.py 50 f DEBUG Start: "request_workspace_data_sources_list"
2018-09-20 21:10:46,656 event_handler.py 4550 request_workspace_data_sources_list DEBUG Start: request_workspace_data_sources_list
2018-09-20 21:10:46,700 event_handler.py 3053 load_workspace DEBUG Trying to load new workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace"
2018-09-20 21:10:47,131 event_handler.py 3071 load_workspace INFO Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace loaded."
2018-09-20 21:10:47,141 event_handler.py 54 f DEBUG Stop: "request_workspace_data_sources_list". Time for running method was 0.485027551651001
2018-09-20 21:10:47,146 event_handler.py 50 f DEBUG Start: "request_workspace_data_sources_edit"
2018-09-20 21:10:47,151 event_handler.py 4508 request_workspace_data_sources_edit DEBUG Start: request_workspace_data_sources_list
2018-09-20 21:10:47,188 event_handler.py 3064 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
2018-09-20 21:10:47,244 workspaces.py 1834 load_all_data DEBUG All selected data in (status 1 in datatype_settings.txt) is not loaded.
REQUEST True phytoplankton_sharkweb_data_Biovolume concentration_2007-2012_201809202109.txt
REQUEST True chlorophyll_sharkweb_data_Chlorophyll-a_2007-2012_201809202109.txt
REQUEST True physicalchemical_sharkweb_data_all_2007-2012_201809202109.txt
¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤
D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/input_data/exports\all_data.pkl
D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/input_data/exports\all_data.txt
2018-09-20 21:10:48,332 workspaces.py 1917 load_datatype_data DEBUG New data files has been loaded for datatype: physicalchemical
2018-09-20 21:10:48,375 workspaces.py 1917 load_datatype_data DEBUG New data files has been loaded for datatype: physicalchemicalmodel
2018-09-20 21:10:48,575 workspaces.py 1917 load_datatype_data DEBUG New data files has been loaded for datatype: chlorophyll
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/input_data/exports/Raw_format_chlorophyll_data.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/input_data/exports/Raw_format_phytoplankton_data.txt
2018-09-20 21:10:56,555 workspaces.py 1917 load_datatype_data DEBUG New data files has been loaded for datatype: phytoplankton
2018-09-20 21:10:56,594 workspaces.py 1917 load_datatype_data DEBUG New data files has been loaded for datatype: zoobenthos
self.all_data 0
MMMMMMMMM
time for _add_prioritized_parameter SALT is: 0.08000469207763672
time for _add_prioritized_parameter TEMP is: 0.07900428771972656
time for _add_prioritized_parameter DOXY is: 0.07700467109680176
--------------------------------------------------
Total time: 0.8770499229431152
time_preparations 0.0060002803802490234
time_list_group_data: 0.009000539779663086
time_list_calc_integ: 0.010000228881835938
time_list_add_row: 0.4480307102203369
time_all_calculations: 0.7960455417633057
time_iterator: 0.0
time_add_data: 0.06600356101989746
Done adding integrated_calc "CPHL_INTEG_CALC" using parameter "CPHL_BTL"
time for integrated_calc "CPHL_INTEG_CALC" using parameter "CPHL_BTL is: 0.8770499229431152
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/input_data/exports/all_data.txt
2018-09-20 21:11:00,420 event_handler.py 50 f DEBUG Start: "request_workspace_data_sources_list"
2018-09-20 21:11:00,423 event_handler.py 4550 request_workspace_data_sources_list DEBUG Start: request_workspace_data_sources_list
2018-09-20 21:11:00,468 event_handler.py 3064 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
2018-09-20 21:11:00,484 event_handler.py 54 f DEBUG Stop: "request_workspace_data_sources_list". Time for running method was 0.06100320816040039
2018-09-20 21:11:00,487 event_handler.py 54 f DEBUG Stop: "request_workspace_data_sources_edit". Time for running method was 13.337762832641602
In [ ]:
In [ ]:
In [ ]:
In [12]:
ekos = EventHandler(**paths)
request = ekos.test_requests['request_subset_add_1']
response_subset_add = ekos.request_subset_add(request)
ekos.write_test_response('request_subset_add_1', response_subset_add)
2018-09-20 21:11:20,900 event_handler.py 117 __init__ DEBUG Start EventHandler: event_handler
2018-09-20 21:11:20,904 event_handler.py 152 _load_mapping_objects DEBUG Loading mapping files from pickle file.
2018-09-20 21:11:21,834 event_handler.py 128 __init__ DEBUG Time for mapping: 0.9310534000396729
2018-09-20 21:11:21,873 event_handler.py 133 __init__ DEBUG Time for initiating EventHandler: 0.9740557670593262
2018-09-20 21:11:21,878 event_handler.py 50 f DEBUG Start: "request_subset_add"
2018-09-20 21:11:21,884 event_handler.py 3325 request_subset_add DEBUG Start: request_subset_add
2018-09-20 21:11:21,931 event_handler.py 3053 load_workspace DEBUG Trying to load new workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace"
2018-09-20 21:11:22,373 event_handler.py 3071 load_workspace INFO Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace loaded."
2018-09-20 21:11:22,376 event_handler.py 375 copy_subset DEBUG Trying to copy subset "default_subset"
2018-09-20 21:11:22,520 logger.py 85 add_log DEBUG
2018-09-20 21:11:22,525 logger.py 86 add_log DEBUG ========================================================================================================================
2018-09-20 21:11:22,530 logger.py 87 add_log DEBUG ### Log added for log_id "344e8ecb-71b0-41a9-b0ad-c1accd12bbf8" at locaton: D:\git\ekostat_calculator\workspaces\d347d3bf-3f26-42f3-b261-d48253f9ba26\log\subset_344e8ecb-71b0-41a9-b0ad-c1accd12bbf8.log
2018-09-20 21:11:22,535 logger.py 88 add_log DEBUG ------------------------------------------------------------------------------------------------------------------------
2018-09-20 21:11:22,547 event_handler.py 54 f DEBUG Stop: "request_subset_add". Time for running method was 0.6630380153656006
¤ mw_subset
====================================================================================================
344e8ecb-71b0-41a9-b0ad-c1accd12bbf8
D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/log
subset
----------------------------------------------------------------------------------------------------
In [13]:
update_subset_uuid_in_test_requests(subset_alias='mw_subset')
2018-09-20 21:11:27,120 event_handler.py 117 __init__ DEBUG Start EventHandler: event_handler
2018-09-20 21:11:27,124 event_handler.py 152 _load_mapping_objects DEBUG Loading mapping files from pickle file.
2018-09-20 21:11:28,106 event_handler.py 128 __init__ DEBUG Time for mapping: 0.9830563068389893
2018-09-20 21:11:28,148 event_handler.py 133 __init__ DEBUG Time for initiating EventHandler: 1.0290589332580566
2018-09-20 21:11:28,186 event_handler.py 3053 load_workspace DEBUG Trying to load new workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace"
2018-09-20 21:11:28,729 event_handler.py 3071 load_workspace INFO Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace loaded."
Updating user user_1 with workspace_uuid d347d3bf-3f26-42f3-b261-d48253f9ba26 and subset_uuid 344e8ecb-71b0-41a9-b0ad-c1accd12bbf8
d347d3bf-3f26-42f3-b261-d48253f9ba26 344e8ecb-71b0-41a9-b0ad-c1accd12bbf8
----------------------------------------------------------------------
In [ ]:
In [ ]:
In [18]:
ekos = EventHandler(**paths)
update_subset_uuid_in_test_requests(subset_alias='mw_subset')
request = ekos.test_requests['request_subset_get_data_filter']
response_subset_get_data_filter = ekos.request_subset_get_data_filter(request)
ekos.write_test_response('request_subset_get_data_filter', response_subset_get_data_filter)
2018-09-20 21:20:46,466 event_handler.py 117 __init__ DEBUG Start EventHandler: event_handler
2018-09-20 21:20:46,470 event_handler.py 152 _load_mapping_objects DEBUG Loading mapping files from pickle file.
2018-09-20 21:20:47,349 event_handler.py 128 __init__ DEBUG Time for mapping: 0.8790502548217773
2018-09-20 21:20:47,385 event_handler.py 133 __init__ DEBUG Time for initiating EventHandler: 0.9200527667999268
2018-09-20 21:20:47,401 event_handler.py 117 __init__ DEBUG Start EventHandler: event_handler
2018-09-20 21:20:47,406 event_handler.py 152 _load_mapping_objects DEBUG Loading mapping files from pickle file.
2018-09-20 21:20:48,263 event_handler.py 128 __init__ DEBUG Time for mapping: 0.8580491542816162
2018-09-20 21:20:48,299 event_handler.py 133 __init__ DEBUG Time for initiating EventHandler: 0.8990514278411865
2018-09-20 21:20:48,332 event_handler.py 3053 load_workspace DEBUG Trying to load new workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace"
2018-09-20 21:20:48,445 logger.py 85 add_log DEBUG
2018-09-20 21:20:48,450 logger.py 86 add_log DEBUG ========================================================================================================================
2018-09-20 21:20:48,453 logger.py 87 add_log DEBUG ### Log added for log_id "344e8ecb-71b0-41a9-b0ad-c1accd12bbf8" at locaton: D:\git\ekostat_calculator\workspaces\d347d3bf-3f26-42f3-b261-d48253f9ba26\log\subset_344e8ecb-71b0-41a9-b0ad-c1accd12bbf8.log
2018-09-20 21:20:48,458 logger.py 88 add_log DEBUG ------------------------------------------------------------------------------------------------------------------------
2018-09-20 21:20:48,555 logger.py 85 add_log DEBUG
2018-09-20 21:20:48,561 logger.py 86 add_log DEBUG ========================================================================================================================
2018-09-20 21:20:48,567 logger.py 87 add_log DEBUG ### Log added for log_id "default_subset" at locaton: D:\git\ekostat_calculator\workspaces\d347d3bf-3f26-42f3-b261-d48253f9ba26\log\subset_default_subset.log
2018-09-20 21:20:48,570 logger.py 88 add_log DEBUG ------------------------------------------------------------------------------------------------------------------------
====================================================================================================
344e8ecb-71b0-41a9-b0ad-c1accd12bbf8
D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/log
subset
----------------------------------------------------------------------------------------------------
====================================================================================================
default_subset
D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/log
subset
----------------------------------------------------------------------------------------------------
2018-09-20 21:20:48,923 logger.py 85 add_log DEBUG
2018-09-20 21:20:48,929 logger.py 86 add_log DEBUG ========================================================================================================================
2018-09-20 21:20:48,936 logger.py 87 add_log DEBUG ### Log added for log_id "d347d3bf-3f26-42f3-b261-d48253f9ba26" at locaton: D:\git\ekostat_calculator\workspaces\d347d3bf-3f26-42f3-b261-d48253f9ba26\log\workspace_d347d3bf-3f26-42f3-b261-d48253f9ba26.log
2018-09-20 21:20:48,940 logger.py 88 add_log DEBUG ------------------------------------------------------------------------------------------------------------------------
2018-09-20 21:20:48,946 event_handler.py 3071 load_workspace INFO Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace loaded."
====================================================================================================
d347d3bf-3f26-42f3-b261-d48253f9ba26
D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/log
workspace
----------------------------------------------------------------------------------------------------
Updating user user_1 with workspace_uuid d347d3bf-3f26-42f3-b261-d48253f9ba26 and subset_uuid 344e8ecb-71b0-41a9-b0ad-c1accd12bbf8
d347d3bf-3f26-42f3-b261-d48253f9ba26 344e8ecb-71b0-41a9-b0ad-c1accd12bbf8
----------------------------------------------------------------------
2018-09-20 21:20:49,182 event_handler.py 50 f DEBUG Start: "request_subset_get_data_filter"
2018-09-20 21:20:49,185 event_handler.py 3521 request_subset_get_data_filter DEBUG Start: request_subset_get_data_filter
2018-09-20 21:20:49,224 event_handler.py 3053 load_workspace DEBUG Trying to load new workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace"
2018-09-20 21:20:49,780 event_handler.py 3071 load_workspace INFO Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace loaded."
2018-09-20 21:20:49,886 workspaces.py 1842 load_all_data DEBUG Data has been loaded from existing all_data.pickle file.
2018-09-20 21:20:50,002 event_handler.py 54 f DEBUG Stop: "request_subset_get_data_filter". Time for running method was 0.8170466423034668
self.all_data 0
In [20]:
# import re
# string = """{
# "workspace_uuid": "52725df4-b4a0-431c-a186-5e542fc6a3a4",
# "data_sources": [
# {
# "status": true,
# "loaded": false,
# "filename": "physicalchemical_sharkweb_data_all_2013-2014_20180916.txt",
# "datatype": "physicalchemical"
# }
# ]
# }"""
# r = re.sub('"workspace_uuid": ".{36}"', '"workspace_uuid": "new"', string)
In [33]:
ekos = EventHandler(**paths)
update_subset_uuid_in_test_requests(subset_alias='mw_subset')
request = ekos.test_requests['request_subset_set_data_filter']
response_subset_set_data_filter = ekos.request_subset_set_data_filter(request)
ekos.write_test_response('request_subset_set_data_filter', response_subset_set_data_filter)
2018-09-20 21:47:50,777 event_handler.py 117 __init__ DEBUG Start EventHandler: event_handler
2018-09-20 21:47:50,780 event_handler.py 152 _load_mapping_objects DEBUG Loading mapping files from pickle file.
2018-09-20 21:47:51,704 event_handler.py 128 __init__ DEBUG Time for mapping: 0.9240529537200928
2018-09-20 21:47:51,739 event_handler.py 133 __init__ DEBUG Time for initiating EventHandler: 0.9630551338195801
2018-09-20 21:47:51,745 event_handler.py 117 __init__ DEBUG Start EventHandler: event_handler
2018-09-20 21:47:51,750 event_handler.py 152 _load_mapping_objects DEBUG Loading mapping files from pickle file.
2018-09-20 21:47:52,607 event_handler.py 128 __init__ DEBUG Time for mapping: 0.8570492267608643
2018-09-20 21:47:52,641 event_handler.py 133 __init__ DEBUG Time for initiating EventHandler: 0.8990511894226074
2018-09-20 21:47:52,677 event_handler.py 3064 load_workspace DEBUG Trying to load new workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace"
2018-09-20 21:47:53,173 event_handler.py 3082 load_workspace INFO Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace loaded."
2018-09-20 21:47:53,389 event_handler.py 50 f DEBUG Start: "request_subset_set_data_filter"
2018-09-20 21:47:53,392 event_handler.py 3415 request_subset_set_data_filter DEBUG Start: request_subset_get_indicator_settings
Updating user user_1 with workspace_uuid d347d3bf-3f26-42f3-b261-d48253f9ba26 and subset_uuid 344e8ecb-71b0-41a9-b0ad-c1accd12bbf8
d347d3bf-3f26-42f3-b261-d48253f9ba26 344e8ecb-71b0-41a9-b0ad-c1accd12bbf8
----------------------------------------------------------------------
2018-09-20 21:47:53,428 event_handler.py 3064 load_workspace DEBUG Trying to load new workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace"
2018-09-20 21:47:54,078 event_handler.py 3082 load_workspace INFO Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace loaded."
2018-09-20 21:47:54,168 workspaces.py 1842 load_all_data DEBUG Data has been loaded from existing all_data.pickle file.
2018-09-20 21:47:54,207 event_handler.py 54 f DEBUG Stop: "request_subset_set_data_filter". Time for running method was 0.8150465488433838
self.all_data 0
In [ ]:
In [ ]:
In [35]:
ekos = EventHandler(**paths)
request = ekos.test_requests['request_subset_get_indicator_settings']
# request = ekos.test_requests['request_subset_get_indicator_settings_no_areas']
# print(request['subset']['subset_uuid'])
# request['subset']['subset_uuid'] = 'fel'
# print(request['subset']['subset_uuid'])
response_subset_get_indicator_settings = ekos.request_subset_get_indicator_settings(request)
ekos.write_test_response('request_subset_get_indicator_settings', response_subset_get_indicator_settings)
2018-09-20 21:51:20,204 event_handler.py 117 __init__ DEBUG Start EventHandler: event_handler
2018-09-20 21:51:20,207 event_handler.py 152 _load_mapping_objects DEBUG Loading mapping files from pickle file.
2018-09-20 21:51:21,136 event_handler.py 128 __init__ DEBUG Time for mapping: 0.9290530681610107
2018-09-20 21:51:21,172 event_handler.py 133 __init__ DEBUG Time for initiating EventHandler: 0.9690556526184082
2018-09-20 21:51:21,177 event_handler.py 50 f DEBUG Start: "request_subset_get_indicator_settings"
2018-09-20 21:51:21,183 event_handler.py 3583 request_subset_get_indicator_settings DEBUG Start: request_subset_get_indicator_settings
2018-09-20 21:51:21,220 event_handler.py 3065 load_workspace DEBUG Trying to load new workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace"
2018-09-20 21:51:21,710 event_handler.py 3083 load_workspace INFO Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace loaded."
2018-09-20 21:51:21,797 workspaces.py 1842 load_all_data DEBUG Data has been loaded from existing all_data.pickle file.
2018-09-20 21:51:21,893 event_handler.py 3076 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
self.all_data 0
[2008, 2009, 2010, 2011, 2012]
{2007, 2008, 2009, 2010, 2011, 2012}
2018-09-20 21:51:22,086 event_handler.py 3076 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
2018-09-20 21:51:22,323 event_handler.py 3076 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
2018-09-20 21:51:22,562 event_handler.py 3076 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
2018-09-20 21:51:22,764 event_handler.py 3076 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
2018-09-20 21:51:23,036 event_handler.py 3076 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
2018-09-20 21:51:23,308 event_handler.py 3076 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
2018-09-20 21:51:23,511 event_handler.py 3076 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
2018-09-20 21:51:23,717 event_handler.py 3076 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
2018-09-20 21:51:23,892 event_handler.py 3076 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
2018-09-20 21:51:24,073 event_handler.py 3076 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
2018-09-20 21:51:24,251 event_handler.py 3076 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
2018-09-20 21:51:24,475 event_handler.py 3076 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
2018-09-20 21:51:24,691 event_handler.py 3076 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
2018-09-20 21:51:24,869 event_handler.py 3076 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
2018-09-20 21:51:25,043 event_handler.py 3076 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
2018-09-20 21:51:25,226 event_handler.py 3076 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
2018-09-20 21:51:25,435 event_handler.py 3076 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
2018-09-20 21:51:25,697 event_handler.py 3076 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
2018-09-20 21:51:25,878 event_handler.py 54 f DEBUG Stop: "request_subset_get_indicator_settings". Time for running method was 4.694268703460693
In [28]:
ekos.data_filter_object.get_include_list_filter('MYEAR')
Out[28]:
['2013', '2014', '2015', '2016']
In [ ]:
In [36]:
ekos = EventHandler(**paths)
request = ekos.test_requests['request_subset_set_indicator_settings']
response_subset_set_indicator_settings = ekos.request_subset_set_indicator_settings(request)
ekos.write_test_response('request_subset_set_indicator_settings', response_subset_set_indicator_settings)
2018-09-20 21:54:43,354 event_handler.py 117 __init__ DEBUG Start EventHandler: event_handler
2018-09-20 21:54:43,357 event_handler.py 152 _load_mapping_objects DEBUG Loading mapping files from pickle file.
2018-09-20 21:54:44,323 event_handler.py 128 __init__ DEBUG Time for mapping: 0.966055154800415
2018-09-20 21:54:44,358 event_handler.py 133 __init__ DEBUG Time for initiating EventHandler: 1.0050575733184814
2018-09-20 21:54:44,363 event_handler.py 50 f DEBUG Start: "request_subset_set_indicator_settings"
2018-09-20 21:54:44,369 event_handler.py 3794 request_subset_set_indicator_settings DEBUG Start: request_subset_set_indicator_settings
2018-09-20 21:54:44,405 event_handler.py 3065 load_workspace DEBUG Trying to load new workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace"
2018-09-20 21:54:44,900 event_handler.py 3083 load_workspace INFO Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace loaded."
2018-09-20 21:54:44,999 workspaces.py 1842 load_all_data DEBUG Data has been loaded from existing all_data.pickle file.
2018-09-20 21:54:45,012 event_handler.py 50 f DEBUG Start: "set_settings_filter"
2018-09-20 21:54:45,029 event_handler.py 54 f DEBUG Stop: "set_settings_filter". Time for running method was 0.012000799179077148
2018-09-20 21:54:45,032 event_handler.py 50 f DEBUG Start: "set_settings_filter"
2018-09-20 21:54:45,057 event_handler.py 54 f DEBUG Stop: "set_settings_filter". Time for running method was 0.017000913619995117
2018-09-20 21:54:45,064 event_handler.py 50 f DEBUG Start: "set_settings_filter"
2018-09-20 21:54:45,081 event_handler.py 54 f DEBUG Stop: "set_settings_filter". Time for running method was 0.012000799179077148
2018-09-20 21:54:45,084 event_handler.py 50 f DEBUG Start: "set_settings_filter"
2018-09-20 21:54:45,117 event_handler.py 54 f DEBUG Stop: "set_settings_filter". Time for running method was 0.022001266479492188
self.all_data 0
Tolerance column
Value to set for type_area "12n" and variable "MIN_NR_YEARS": ['9']
List column (6, 7, 8)
¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤
¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤
(6, 7, 8) <class 'tuple'> MONTH_LIST
Value to set for type_area "12n" and variable "MONTH_LIST": ['6;7;8']
Tolerance column
Value to set for type_area "1n" and variable "MIN_NR_YEARS": ['8']
List column (1, 2)
¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤
¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤¤
(1, 2) <class 'tuple'> MONTH_LIST
Value to set for type_area "1n" and variable "MONTH_LIST": ['1;2']
2018-09-20 21:54:45,122 event_handler.py 54 f DEBUG Stop: "request_subset_set_indicator_settings". Time for running method was 0.7530429363250732
In [37]:
ekos = EventHandler(**paths)
request = ekos.test_requests['request_subset_calculate_status']
response = ekos.request_subset_calculate_status(request)
ekos.write_test_response('request_subset_calculate_status', response)
2018-09-20 21:54:51,186 event_handler.py 117 __init__ DEBUG Start EventHandler: event_handler
2018-09-20 21:54:51,190 event_handler.py 152 _load_mapping_objects DEBUG Loading mapping files from pickle file.
2018-09-20 21:54:52,012 event_handler.py 128 __init__ DEBUG Time for mapping: 0.8220469951629639
2018-09-20 21:54:52,051 event_handler.py 133 __init__ DEBUG Time for initiating EventHandler: 0.8650493621826172
2018-09-20 21:54:52,057 event_handler.py 50 f DEBUG Start: "request_subset_calculate_status"
2018-09-20 21:54:52,065 event_handler.py 3365 request_subset_calculate_status DEBUG Start: request_subset_calculate_status
2018-09-20 21:54:52,109 event_handler.py 3065 load_workspace DEBUG Trying to load new workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace"
2018-09-20 21:54:52,856 event_handler.py 3083 load_workspace INFO Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace loaded."
2018-09-20 21:54:52,956 workspaces.py 1842 load_all_data DEBUG Data has been loaded from existing all_data.pickle file.
2018-09-20 21:54:53,009 event_handler.py 3076 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
2018-09-20 21:54:53,050 event_handler.py 3076 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
self.all_data 0
=== dummy_file.txt
2018-09-20 21:54:53,170 event_handler.py 3076 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
--------------------------------------------------
Total time to apply data filters for indicator indicator_din_winter: 0.06900405883789062
--------------------------------------------------
--------------------------------------------------
Total time to apply data filters for indicator indicator_ntot_summer: 0.05800318717956543
--------------------------------------------------
--------------------------------------------------
Total time to apply data filters for indicator indicator_ntot_winter: 0.05700325965881348
--------------------------------------------------
--------------------------------------------------
Total time to apply data filters for indicator indicator_dip_winter: 0.06200385093688965
--------------------------------------------------
--------------------------------------------------
Total time to apply data filters for indicator indicator_ptot_summer: 0.0760042667388916
--------------------------------------------------
--------------------------------------------------
Total time to apply data filters for indicator indicator_ptot_winter: 0.06600379943847656
--------------------------------------------------
--------------------------------------------------
Total time to apply data filters for indicator indicator_oxygen: 0.04000234603881836
--------------------------------------------------
--------------------------------------------------
Total time to apply data filters for indicator indicator_biov: 0.052002906799316406
--------------------------------------------------
--------------------------------------------------
Total time to apply data filters for indicator indicator_chl: 0.052002906799316406
--------------------------------------------------
--------------------------------------------------
Total time to apply data filters for indicator indicator_secchi: 0.05700325965881348
--------------------------------------------------
****INITIATING INDICATOR OBJECT FOR****
indicator_din_winter
"_set_water_body_indicator_df". Time for running method was 7.181410789489746
--------------------------------------------------
Total time to set up indicator object indicator indicator_din_winter: 7.193411588668823
--------------------------------------------------
****INITIATING INDICATOR OBJECT FOR****
indicator_ntot_summer
"_set_water_body_indicator_df". Time for running method was 7.266415596008301
--------------------------------------------------
Total time to set up indicator object indicator indicator_ntot_summer: 7.278416156768799
--------------------------------------------------
****INITIATING INDICATOR OBJECT FOR****
indicator_ntot_winter
"_set_water_body_indicator_df". Time for running method was 5.260300874710083
--------------------------------------------------
Total time to set up indicator object indicator indicator_ntot_winter: 5.273301839828491
--------------------------------------------------
****INITIATING INDICATOR OBJECT FOR****
indicator_dip_winter
"_set_water_body_indicator_df". Time for running method was 4.964284181594849
--------------------------------------------------
Total time to set up indicator object indicator indicator_dip_winter: 4.9752843379974365
--------------------------------------------------
****INITIATING INDICATOR OBJECT FOR****
indicator_ptot_summer
"_set_water_body_indicator_df". Time for running method was 7.094405889511108
--------------------------------------------------
Total time to set up indicator object indicator indicator_ptot_summer: 7.1054065227508545
--------------------------------------------------
****INITIATING INDICATOR OBJECT FOR****
indicator_ptot_winter
"_set_water_body_indicator_df". Time for running method was 5.121293067932129
--------------------------------------------------
Total time to set up indicator object indicator indicator_ptot_winter: 5.132293701171875
--------------------------------------------------
****INITIATING INDICATOR OBJECT FOR****
indicator_oxygen
"_set_water_body_indicator_df". Time for running method was 0.06400346755981445
--------------------------------------------------
Total time to set up indicator object indicator indicator_oxygen: 0.07500410079956055
--------------------------------------------------
****INITIATING INDICATOR OBJECT FOR****
indicator_biov
"_set_water_body_indicator_df". Time for running method was 1.9351105690002441
--------------------------------------------------
Total time to set up indicator object indicator indicator_biov: 1.9461114406585693
--------------------------------------------------
****INITIATING INDICATOR OBJECT FOR****
indicator_chl
"_set_water_body_indicator_df". Time for running method was 2.544145345687866
--------------------------------------------------
Total time to set up indicator object indicator indicator_chl: 2.5551459789276123
--------------------------------------------------
****INITIATING INDICATOR OBJECT FOR****
indicator_secchi
"_set_water_body_indicator_df". Time for running method was 2.6001486778259277
--------------------------------------------------
Total time to set up indicator object indicator indicator_secchi: 2.611149311065674
--------------------------------------------------
indicator_din_winter
--------------------------------------------------
Total time to calculate status for indicator indicator_din_winter: 0.9870564937591553
--------------------------------------------------
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_din_winter-by_date.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_din_winter-by_year_pos.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_din_winter-by_period.txt
indicator_ntot_summer
--------------------------------------------------
Total time to calculate status for indicator indicator_ntot_summer: 1.8781075477600098
--------------------------------------------------
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_ntot_summer-by_date.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_ntot_summer-by_year_pos.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_ntot_summer-by_period.txt
indicator_ntot_winter
--------------------------------------------------
Total time to calculate status for indicator indicator_ntot_winter: 0.9780559539794922
--------------------------------------------------
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_ntot_winter-by_date.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_ntot_winter-by_year_pos.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_ntot_winter-by_period.txt
indicator_dip_winter
--------------------------------------------------
Total time to calculate status for indicator indicator_dip_winter: 1.0000572204589844
--------------------------------------------------
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_dip_winter-by_date.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_dip_winter-by_year_pos.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_dip_winter-by_period.txt
indicator_ptot_summer
--------------------------------------------------
Total time to calculate status for indicator indicator_ptot_summer: 1.9941143989562988
--------------------------------------------------
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_ptot_summer-by_date.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_ptot_summer-by_year_pos.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_ptot_summer-by_period.txt
indicator_ptot_winter
--------------------------------------------------
Total time to calculate status for indicator indicator_ptot_winter: 0.9840562343597412
--------------------------------------------------
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_ptot_winter-by_date.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_ptot_winter-by_year_pos.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_ptot_winter-by_period.txt
indicator_oxygen
--------------------------------------------------
Total time to calculate status for indicator indicator_oxygen: 0.07200407981872559
--------------------------------------------------
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_oxygen-by_date.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_oxygen-by_period.txt
..\core\indicators.py:1434: RuntimeWarning: Mean of empty slice
value = np.nanmean(q)
indicator_biov
--------------------------------------------------
Total time to calculate status for indicator indicator_biov: 1.9381110668182373
--------------------------------------------------
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_biov-by_date.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_biov-by_year.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_biov-by_year_pos.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_biov-by_period.txt
indicator_chl
--------------------------------------------------
Total time to calculate status for indicator indicator_chl: 1.6870965957641602
--------------------------------------------------
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_chl-by_date.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_chl-by_year.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_chl-by_year_pos.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_chl-by_period.txt
indicator_secchi
--------------------------------------------------
Total time to calculate status for indicator indicator_secchi: 1.7250988483428955
--------------------------------------------------
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_secchi-by_date.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_secchi-by_period.txt
QualityElementBase
********
nutrients
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_p_winter-by_period.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_n_winter-by_period.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_p_summer-by_period.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_n_summer-by_period.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_p-by_period.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/indicator_n-by_period.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/qe_nutrients-by_period.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/nutrients_all_results.txt
2018-09-20 21:55:51,847 event_handler.py 54 f DEBUG Stop: "request_subset_calculate_status". Time for running method was 59.78241944313049
QualityElementBase
********
phytoplankton
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/qe_phytoplankton-by_period.txt
Saving data to: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/subsets/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8/step_3/output/results/phytoplankton_all_results.txt
In [ ]:
In [ ]:
In [59]:
ekos = EventHandler(**paths)
request = ekos.test_requests['request_workspace_result']
response_workspace_result = ekos.request_workspace_result(request)
ekos.write_test_response('request_workspace_result', response_workspace_result)
2018-09-20 22:23:12,067 event_handler.py 117 __init__ DEBUG Start EventHandler: event_handler
2018-09-20 22:23:12,074 event_handler.py 152 _load_mapping_objects DEBUG Loading mapping files from pickle file.
2018-09-20 22:23:13,244 event_handler.py 128 __init__ DEBUG Time for mapping: 1.1710669994354248
2018-09-20 22:23:13,298 event_handler.py 133 __init__ DEBUG Time for initiating EventHandler: 1.2320704460144043
2018-09-20 22:23:13,308 event_handler.py 50 f DEBUG Start: "request_workspace_result"
2018-09-20 22:23:13,361 event_handler.py 3069 load_workspace DEBUG Trying to load new workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace"
2018-09-20 22:23:14,062 event_handler.py 3087 load_workspace INFO Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace loaded."
2018-09-20 22:23:14,140 event_handler.py 3080 load_workspace DEBUG Workspace "d347d3bf-3f26-42f3-b261-d48253f9ba26" with alias "New test workspace" is already loaded. Set reload=True if you want to reload the workspace.
==============================
indicator_oxygen
------------------------------
2018-09-20 22:23:15,479 event_handler.py 54 f DEBUG Stop: "request_workspace_result". Time for running method was 2.167124032974243
Cache file saved: D:/git/ekostat_calculator/workspaces/d347d3bf-3f26-42f3-b261-d48253f9ba26/cache/344e8ecb-71b0-41a9-b0ad-c1accd12bbf8_result_dict.pkl
In [158]:
response_workspace_result['subset']['a4e53080-2c68-40d5-957f-8cc4dbf77815']['result']['SE552170-130626']['result']['indicator_din_winter']['data']
Out[158]:
[[datetime.datetime(2011, 1, 19, 0, 0),
datetime.datetime(2011, 2, 9, 0, 0),
datetime.datetime(2012, 1, 10, 0, 0),
datetime.datetime(2013, 1, 8, 0, 0),
datetime.datetime(2014, 1, 15, 0, 0),
datetime.datetime(2014, 2, 10, 0, 0),
datetime.datetime(2015, 1, 7, 0, 0),
datetime.datetime(2015, 2, 4, 0, 0),
datetime.datetime(2016, 1, 13, 0, 0),
datetime.datetime(2016, 2, 11, 0, 0)]]
In [49]:
response_workspace_result
Out[49]:
{'subset': {'344e8ecb-71b0-41a9-b0ad-c1accd12bbf8': {'alias': 'mw_subset',
'result': {'SE581700-113000': {'label': 'Gullmarn centralbassäng (SE581700-113000) (POOR)',
'result': {'indicator_biov': {'active': True,
'data': [{'datasets': [{'extend': '',
'label': 'bad',
'type': 'fill',
'x': ['2007-06-04T',
'2007-06-11T',
'2007-07-02T',
'2007-07-09T',
'2007-08-06T',
'2007-08-27T',
'2008-06-03T',
'2008-06-09T',
'2008-07-01T',
'2008-07-07T',
'2008-07-28T',
'2008-08-06T',
'2008-08-18T',
'2009-06-02T',
'2009-06-08T',
'2009-06-29T',
'2009-07-07T',
'2009-07-27T',
'2009-08-04T',
'2009-08-22T',
'2010-06-02T',
'2010-06-28T',
'2010-07-06T',
'2010-07-19T',
'2010-08-03T',
'2010-08-16T',
'2011-06-08T',
'2011-06-17T',
'2011-07-05T',
'2011-07-10T',
'2011-08-03T',
'2011-08-06T',
'2012-07-03T',
'2012-07-09T',
'2012-08-08T',
'2012-08-22T'],
'y': [7.9411764705882355,
7.9411764705882355,
7.9411764705882355,
7.9411764705882355,
7.9411764705882355,
7.9411764705882355,
7.9411764705882355,
7.9411764705882355,
7.9411764705882355,
7.9411764705882355,
7.9411764705882355,
7.9411764705882355,
7.9411764705882355,
7.9411764705882355,
7.9411764705882355,
7.9411764705882355,
7.9411764705882355,
7.9411764705882355,
7.9411764705882355,
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7.9411764705882355,
7.9411764705882355,
7.9411764705882355,
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7.9411764705882355,
7.9411764705882355,
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7.9411764705882355,
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7.9411764705882355,
7.9411764705882355,
7.9411764705882355,
7.9411764705882355]},
{'extend': '',
'label': 'poor',
'type': 'fill',
'x': ['2007-06-04T',
'2007-06-11T',
'2007-07-02T',
'2007-07-09T',
'2007-08-06T',
'2007-08-27T',
'2008-06-03T',
'2008-06-09T',
'2008-07-01T',
'2008-07-07T',
'2008-07-28T',
'2008-08-06T',
'2008-08-18T',
'2009-06-02T',
'2009-06-08T',
'2009-06-29T',
'2009-07-07T',
'2009-07-27T',
'2009-08-04T',
'2009-08-22T',
'2010-06-02T',
'2010-06-28T',
'2010-07-06T',
'2010-07-19T',
'2010-08-03T',
'2010-08-16T',
'2011-06-08T',
'2011-06-17T',
'2011-07-05T',
'2011-07-10T',
'2011-08-03T',
'2011-08-06T',
'2012-07-03T',
'2012-07-09T',
'2012-08-08T',
'2012-08-22T'],
'y': [4.5000000000000009,
4.5000000000000009,
4.5000000000000009,
4.5000000000000009,
4.5000000000000009,
4.5000000000000009,
4.5000000000000009,
4.5000000000000009,
4.5000000000000009,
4.5000000000000009,
4.5000000000000009,
4.5000000000000009,
4.5000000000000009,
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4.5000000000000009,
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4.5000000000000009,
4.5000000000000009,
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4.5000000000000009,
4.5000000000000009,
4.5000000000000009,
4.5000000000000009]},
{'extend': '',
'label': 'moderate',
'type': 'fill',
'x': ['2007-06-04T',
'2007-06-11T',
'2007-07-02T',
'2007-07-09T',
'2007-08-06T',
'2007-08-27T',
'2008-06-03T',
'2008-06-09T',
'2008-07-01T',
'2008-07-07T',
'2008-07-28T',
'2008-08-06T',
'2008-08-18T',
'2009-06-02T',
'2009-06-08T',
'2009-06-29T',
'2009-07-07T',
'2009-07-27T',
'2009-08-04T',
'2009-08-22T',
'2010-06-02T',
'2010-06-28T',
'2010-07-06T',
'2010-07-19T',
'2010-08-03T',
'2010-08-16T',
'2011-06-08T',
'2011-06-17T',
'2011-07-05T',
'2011-07-10T',
'2011-08-03T',
'2011-08-06T',
'2012-07-03T',
'2012-07-09T',
'2012-08-08T',
'2012-08-22T'],
'y': [3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0,
3.0]},
{'extend': '',
'label': 'good',
'type': 'fill',
'x': ['2007-06-04T',
'2007-06-11T',
'2007-07-02T',
'2007-07-09T',
'2007-08-06T',
'2007-08-27T',
'2008-06-03T',
'2008-06-09T',
'2008-07-01T',
'2008-07-07T',
'2008-07-28T',
'2008-08-06T',
'2008-08-18T',
'2009-06-02T',
'2009-06-08T',
'2009-06-29T',
'2009-07-07T',
'2009-07-27T',
'2009-08-04T',
'2009-08-22T',
'2010-06-02T',
'2010-06-28T',
'2010-07-06T',
'2010-07-19T',
'2010-08-03T',
'2010-08-16T',
'2011-06-08T',
'2011-06-17T',
'2011-07-05T',
'2011-07-10T',
'2011-08-03T',
'2011-08-06T',
'2012-07-03T',
'2012-07-09T',
'2012-08-08T',
'2012-08-22T'],
'y': [1.9852941176470589,
1.9852941176470589,
1.9852941176470589,
1.9852941176470589,
1.9852941176470589,
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1.9852941176470589,
1.9852941176470589,
1.9852941176470589,
1.9852941176470589,
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1.9852941176470589,
1.9852941176470589,
1.9852941176470589,
1.9852941176470589,
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1.9852941176470589,
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1.9852941176470589,
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1.9852941176470589,
1.9852941176470589,
1.9852941176470589,
1.9852941176470589,
1.9852941176470589,
1.9852941176470589,
1.9852941176470589,
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7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0,
7.0]},
{'extend': '',
'label': 'poor',
'type': 'fill',
'x': ['2007-06-04T',
'2007-06-18T',
'2007-07-03T',
'2007-07-19T',
'2007-07-31T',
'2007-08-14T',
'2007-08-28T',
'2008-06-02T',
'2008-06-16T',
'2008-07-01T',
'2008-07-15T',
'2008-07-29T',
'2008-08-12T',
'2008-08-26T',
'2009-06-02T',
'2009-06-30T',
'2009-07-23T',
'2009-08-11T',
'2009-08-25T',
'2010-06-08T',
'2010-06-21T',
'2010-07-06T',
'2010-07-15T',
'2010-08-03T',
'2010-08-17T',
'2011-06-07T',
'2011-06-20T',
'2011-07-05T',
'2011-07-18T',
'2011-08-02T',
'2011-08-16T',
'2011-08-30T',
'2012-06-07T',
'2012-06-19T',
'2012-07-03T',
'2012-07-17T',
'2012-07-31T',
'2012-08-14T',
'2012-08-28T'],
'y': [4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0,
4.0]},
{'extend': '',
'label': 'bad',
'type': 'fill',
'x': ['2007-06-04T',
'2007-06-18T',
'2007-07-03T',
'2007-07-19T',
'2007-07-31T',
'2007-08-14T',
'2007-08-28T',
'2008-06-02T',
'2008-06-16T',
'2008-07-01T',
'2008-07-15T',
'2008-07-29T',
'2008-08-12T',
'2008-08-26T',
'2009-06-02T',
'2009-06-30T',
'2009-07-23T',
'2009-08-11T',
'2009-08-25T',
'2010-06-08T',
'2010-06-21T',
'2010-07-06T',
'2010-07-15T',
'2010-08-03T',
'2010-08-17T',
'2011-06-07T',
'2011-06-20T',
'2011-07-05T',
'2011-07-18T',
'2011-08-02T',
'2011-08-16T',
'2011-08-30T',
'2012-06-07T',
'2012-06-19T',
'2012-07-03T',
'2012-07-17T',
'2012-07-31T',
'2012-08-14T',
'2012-08-28T'],
'y': [2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0,
2.0]},
{'label': 'B1',
'type': 'scatter',
'x': ['2007-06-04T',
'2007-06-18T',
'2007-07-03T',
'2007-07-19T',
'2007-07-31T',
'2007-08-14T',
'2007-08-28T',
'2009-06-02T',
'2009-06-30T',
'2009-07-23T',
'2009-08-11T',
'2009-08-25T',
'2010-06-08T',
'2010-06-21T',
'2010-07-06T',
'2010-07-15T',
'2010-08-03T',
'2010-08-17T',
'2011-06-07T',
'2011-06-20T',
'2011-07-05T',
'2011-07-18T',
'2011-08-02T',
'2011-08-16T',
'2011-08-30T',
'2012-06-07T',
'2012-06-19T',
'2012-07-03T',
'2012-07-17T',
'2012-07-31T',
'2012-08-14T',
'2012-08-28T'],
'y': [8.0999999999999996,
6.0,
4.7000000000000002,
7.0,
6.5,
4.0999999999999996,
7.9000000000000004,
8.5,
3.8999999999999999,
6.7999999999999998,
5.0999999999999996,
9.0,
8.9000000000000004,
8.5,
6.5,
5.7999999999999998,
5.7999999999999998,
4.5,
10.300000000000001,
9.1999999999999993,
6.9000000000000004,
4.7000000000000002,
3.5,
5.2999999999999998,
5.5,
7.0999999999999996,
5.5,
5.0,
5.0,
6.0999999999999996,
5.7999999999999998,
5.7000000000000002]},
{'label': 'Bojen (b1)',
'type': 'scatter',
'x': ['2008-06-02T',
'2008-06-16T',
'2008-07-01T',
'2008-07-15T',
'2008-07-29T',
'2008-08-12T',
'2008-08-26T'],
'y': [4.0,
4.5999999999999996,
6.5,
4.0,
6.2999999999999998,
6.0,
6.2000000000000002]}],
'label': 'Secchi',
'type': 'timeseries',
'xlabel': 'Date',
'ylabel': 'm'}],
'label': 'Secchi depth',
'status': 'MODERATE',
'value': 'indicator_secchi'},
'qe_nutrients': {'active': True,
'data': [{}],
'label': 'Nutrients',
'status': 'MODERATE',
'value': 'qe_nutrients'},
'qe_phytoplankton': {'active': True,
'data': [{}],
'label': 'Phytplankton',
'status': 'MODERATE',
'value': 'qe_phytoplankton'}},
'value': 'SE584340-174401',
'worse_status': 'POOR'},
'all': {'label': 'all',
'result': {'indicator_biov': {'active': True,
'label': 'Biovolume',
'status': '',
'value': 'indicator_biov'},
'indicator_chl': {'active': True,
'label': 'Chlorophyll',
'status': '',
'value': 'indicator_chl'},
'indicator_din_winter': {'active': True,
'label': 'DIN winter',
'status': '',
'value': 'indicator_din_winter'},
'indicator_dip_winter': {'active': True,
'label': 'DIP winter',
'status': '',
'value': 'indicator_dip_winter'},
'indicator_n': {'active': True,
'label': 'N',
'status': '',
'value': 'indicator_n'},
'indicator_n_summer': {'active': True,
'label': 'N summer',
'status': '',
'value': 'indicator_n_summer'},
'indicator_n_winter': {'active': True,
'label': 'N winter',
'status': '',
'value': 'indicator_n_winter'},
'indicator_ntot_summer': {'active': True,
'label': 'TN summer',
'status': '',
'value': 'indicator_ntot_summer'},
'indicator_ntot_winter': {'active': True,
'label': 'TN winter',
'status': '',
'value': 'indicator_ntot_winter'},
'indicator_oxygen': {'active': True,
'label': 'Oxygen',
'status': '',
'value': 'indicator_oxygen'},
'indicator_p': {'active': True,
'label': 'P',
'status': '',
'value': 'indicator_p'},
'indicator_p_summer': {'active': True,
'label': 'P summer',
'status': '',
'value': 'indicator_p_summer'},
'indicator_p_winter': {'active': True,
'label': 'P winter',
'status': '',
'value': 'indicator_p_winter'},
'indicator_ptot_summer': {'active': True,
'label': 'TP summer',
'status': '',
'value': 'indicator_ptot_summer'},
'indicator_ptot_winter': {'active': True,
'label': 'TP winter',
'status': '',
'value': 'indicator_ptot_winter'},
'indicator_secchi': {'active': True,
'label': 'Secchi depth',
'status': '',
'value': 'indicator_secchi'},
'qe_nutrients': {'active': True,
'label': 'Nutrients',
'status': '',
'value': 'qe_nutrients'},
'qe_phytoplankton': {'active': True,
'label': 'Phytplankton',
'status': '',
'value': 'qe_phytoplankton'}},
'value': 'all'}},
'status': 'editable',
'subset_uuid': '344e8ecb-71b0-41a9-b0ad-c1accd12bbf8',
'value': True}},
'workspace': {'alias': 'New test workspace',
'status': 'editable',
'workspace_uuid': 'd347d3bf-3f26-42f3-b261-d48253f9ba26'},
'workspace_uuid': 'd347d3bf-3f26-42f3-b261-d48253f9ba26'}
In [136]:
workspace_uuid = 'fccc7645-8501-4541-975b-bdcfb40a5092'
subset_uuid = 'a4e53080-2c68-40d5-957f-8cc4dbf77815'
result = ekos.dict_data_timeseries(workspace_uuid=workspace_uuid,
subset_uuid=subset_uuid,
viss_eu_cd='SE575150-162700',
element_id='indicator_din_winter')
In [138]:
print(result['datasets'][0]['x'])
print()
print(result['y'])
[9.2100000000000009, None, 11.92, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, 9.7699999999999996, None, None, None, None, None, 11.09]
['', '12-Jan', '', '12-Mar', '12-May', '12-Jul', '12-Sep', '12-Nov', '13-Jan', '', '', '13-Mar', '13-May', '13-Jul', '13-Sep', '13-Nov', '', '14-Jan', '14-Mar', '14-May', '14-Jul', '14-Sep', '14-Nov', '15-Jan', '', '15-Mar', '15-May', '15-Jul', '15-Sep', '15-Nov', '', '16-Jan', '', '16-Mar', '16-May', '16-Jul', '16-Sep', '16-Nov', '']
In [143]:
for k in range(len(result['datasets'])):
print(result['datasets'][k]['x'])
[9.2100000000000009, None, 11.92, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, None, 9.7699999999999996, None, None, None, None, None, 11.09]
[None, None, None, None, None, None, None, None, None, None, 18.41, None, None, None, None, None, 11.69, None, None, None, None, None, None, None, 12.41, None, None, None, None, None, 9.6500000000000004, None, None, None, None, None, None, None, None]
[10.640000000000001, None, 11.210000000000001, None, None, None, None, None, None, 13.69, None, None, None, None, None, None, 10.210000000000001, None, None, None, None, None, None, None, 13.07, None, None, None, None, None, 9.5800000000000001, None, 9.8499999999999996, None, None, None, None, None, 11.0]
[2.9951999999999988, None, 2.4985999999999979, None, None, None, None, None, None, 4.7332999999999981, 3.4917999999999978, None, None, None, None, None, 2.7468999999999983, None, None, None, None, None, None, None, 3.9139099999999978, None, None, None, None, None, 2.2502999999999975, None, 2.0019999999999989, None, None, None, None, None, 2.4985999999999979]
[3.7439999999999984, None, 3.1232499999999974, None, None, None, None, None, None, 5.9166249999999971, 4.3647499999999972, None, None, None, None, None, 3.4336249999999979, None, None, None, None, None, None, None, 4.8923874999999972, None, None, None, None, None, 2.8128749999999969, None, 2.5024999999999986, None, None, None, None, None, 3.1232499999999974]
[4.4704477611940279, None, 3.7292537313432801, None, None, None, None, None, None, 7.0646268656716389, 5.2116417910447721, None, None, None, None, None, 4.099850746268654, None, None, None, None, None, None, None, 5.8416567164179067, None, None, None, None, None, 3.3586567164179066, None, 2.9880597014925354, None, None, None, None, None, 3.7292537313432801]
[6.807272727272724, None, 5.6786363636363593, None, None, None, None, None, None, 10.757499999999995, 7.9359090909090861, None, None, None, None, None, 6.2429545454545421, None, None, None, None, None, None, None, 8.8952499999999954, None, None, None, None, None, 5.1143181818181764, None, 4.5499999999999972, None, None, None, None, None, 5.6786363636363593]
[10.328275862068962, None, 8.6158620689655105, None, None, None, None, None, None, 16.321724137931028, 12.040689655172407, None, None, None, None, None, 9.4720689655172361, None, None, None, None, None, None, None, 13.496241379310337, None, None, None, None, None, 7.759655172413785, None, 6.9034482758620657, None, None, None, None, None, 8.6158620689655105]
In [116]:
import datetime
# Extend date list
start_year = all_dates[0].year
end_year = all_dates[-1].year+1
date_intervall = []
for year in range(start_year, end_year+1):
for month in range(1, 13):
d = datetime.datetime(year, month, 1)
if d >= all_dates[0] and d <= all_dates[-1]:
date_intervall.append(d)
extended_dates = sorted(set(all_dates + date_intervall))
# Loop dates and add/remove values
new_x = []
new_y = dict((item, []) for item in date_to_y)
for date in extended_dates:
if date in date_intervall:
new_x.append(date.strftime('%y-%b'))
else:
new_x.append('')
for i in new_y:
new_y[i].append(date_to_y[i].get(date, None))
# new_y = {}
# for i in date_to_y:
# new_y[i] = []
# for date in all_dates:
# d = date_to_y[i].get(date)
# if d:
# new_y[i].append(d)
# else:
# new_y[i].append(None)
In [117]:
new_y[0]
Out[117]:
[9.2100000000000009,
None,
11.92,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
9.7699999999999996,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
None,
11.09]
In [110]:
import datetime
year_list = range(2011, 2013+1)
month_list = range(1, 13)
date_list = []
for year in year_list:
for month in month_list:
date_list.append(datetime.datetime(year, month, 1))
In [111]:
date_list
Out[111]:
[datetime.datetime(2011, 1, 1, 0, 0),
datetime.datetime(2011, 2, 1, 0, 0),
datetime.datetime(2011, 3, 1, 0, 0),
datetime.datetime(2011, 4, 1, 0, 0),
datetime.datetime(2011, 5, 1, 0, 0),
datetime.datetime(2011, 6, 1, 0, 0),
datetime.datetime(2011, 7, 1, 0, 0),
datetime.datetime(2011, 8, 1, 0, 0),
datetime.datetime(2011, 9, 1, 0, 0),
datetime.datetime(2011, 10, 1, 0, 0),
datetime.datetime(2011, 11, 1, 0, 0),
datetime.datetime(2011, 12, 1, 0, 0),
datetime.datetime(2012, 1, 1, 0, 0),
datetime.datetime(2012, 2, 1, 0, 0),
datetime.datetime(2012, 3, 1, 0, 0),
datetime.datetime(2012, 4, 1, 0, 0),
datetime.datetime(2012, 5, 1, 0, 0),
datetime.datetime(2012, 6, 1, 0, 0),
datetime.datetime(2012, 7, 1, 0, 0),
datetime.datetime(2012, 8, 1, 0, 0),
datetime.datetime(2012, 9, 1, 0, 0),
datetime.datetime(2012, 10, 1, 0, 0),
datetime.datetime(2012, 11, 1, 0, 0),
datetime.datetime(2012, 12, 1, 0, 0),
datetime.datetime(2013, 1, 1, 0, 0),
datetime.datetime(2013, 2, 1, 0, 0),
datetime.datetime(2013, 3, 1, 0, 0),
datetime.datetime(2013, 4, 1, 0, 0),
datetime.datetime(2013, 5, 1, 0, 0),
datetime.datetime(2013, 6, 1, 0, 0),
datetime.datetime(2013, 7, 1, 0, 0),
datetime.datetime(2013, 8, 1, 0, 0),
datetime.datetime(2013, 9, 1, 0, 0),
datetime.datetime(2013, 10, 1, 0, 0),
datetime.datetime(2013, 11, 1, 0, 0),
datetime.datetime(2013, 12, 1, 0, 0)]
In [104]:
a
Out[104]:
{2, 4}
In [81]:
y[3][i]
Out[81]:
2.9951999999999988
In [29]:
sorted(pd.to_datetime(df['SDATE']))
Out[29]:
[Timestamp('2011-01-19 00:00:00'),
Timestamp('2011-02-09 00:00:00'),
Timestamp('2012-01-10 00:00:00'),
Timestamp('2013-01-08 00:00:00')]
In [ ]:
Content source: ekostat/ekostat_calculator
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