ipyrad is designed to allow you to work with your samples in a very modular way. Meaning you can easily split your Assembly objects to group different samples into different runs that apply different parameter settings, and then you can merge them back together later. Similarly, with ipyrad you can easily merge multiple samples into a single sample, which may be useful when you include technical replicates in your sequencing lanes, or sequence an individual on multiple lanes.
In [1]:
import ipyrad as ip
In [2]:
# demux first lane of data
data1 = ip.Assembly("data1")
data1.params.raw_fastq_path = "./ipsimdata/pairddrad_example_R*.gz"
data1.params.barcodes_path = "./ipsimdata/pairddrad_example_barcodes.txt"
data1.params.assembly_method = "reference"
data1.params.reference_sequence = "./ipsimdata/pairddrad_example_genome.fa"
data1.params.datatype = "pairddrad"
data1.run('1', force=True, launch_client=True)
# demux second lane of data
data2 = ip.Assembly("data2")
data2.params.raw_fastq_path = "./ipsimdata/pairddrad_example_R*.gz"
data2.params.barcodes_path = "./ipsimdata/pairddrad_example_barcodes.txt"
data2.params.assembly_method = "reference"
data2.params.reference_sequence = "./ipsimdata/pairddrad_example_genome.fa"
data2.params.datatype = "pairddrad"
data2.run('1', force=True, launch_client=True)
# merge assemblies
mdata = ip.merge("alldata", [data1, data2])
mdata.run("234567", force=True, launch_client=True)
New Assembly: data1
establishing parallel connection:
Assembly: data1
[####################] 100% 0:00:06 | sorting reads | s1 |
[####################] 100% 0:00:01 | writing/compressing | s1 |
New Assembly: data2
establishing parallel connection:
Assembly: data2
[####################] 100% 0:00:05 | sorting reads | s1 |
[####################] 100% 0:00:01 | writing/compressing | s1 |
New Assembly: alldata
establishing parallel connection:
Assembly: alldata
[####################] 100% 0:00:01 | concatenating inputs | s2 |
[####################] 100% 0:00:08 | processing reads | s2 |
[####################] 100% 0:00:00 | indexing reference | s3 |
[####################] 100% 0:00:00 | concatenating | s3 |
[####################] 100% 0:00:03 | join unmerged pairs | s3 |
[####################] 100% 0:00:03 | dereplicating | s3 |
[####################] 100% 0:00:00 | splitting dereps | s3 |
[####################] 100% 0:00:04 | mapping reads | s3 |
[####################] 100% 0:00:06 | building clusters | s3 |
[####################] 100% 0:00:00 | calc cluster stats | s3 |
[####################] 100% 0:00:03 | inferring [H, E] | s4 |
[####################] 100% 0:00:00 | calculating depths | s5 |
[####################] 100% 0:00:00 | chunking clusters | s5 |
[####################] 100% 0:00:21 | consens calling | s5 |
[####################] 100% 0:00:02 | indexing alleles | s5 |
[####################] 100% 0:00:00 | concatenating bams | s6 |
[####################] 100% 0:00:00 | fetching regions | s6 |
[####################] 100% 0:00:00 | building loci | s6 |
[####################] 100% 0:00:03 | applying filters | s7 |
[####################] 100% 0:00:02 | building arrays | s7 |
[####################] 100% 0:00:00 | writing conversions | s7 |
[####################] 100% 0:00:01 | indexing vcf depths | s7 |
[####################] 100% 0:00:01 | writing vcf output | s7 |
In [2]:
# demux first lane of data
data1 = ip.Assembly("data1")
data1.params.raw_fastq_path = "./ipsimdata/rad_example_R1_.fastq.gz"
data1.params.barcodes_path = "./ipsimdata/rad_example_barcodes.txt"
data1.run('1', force=True, launch_client=True)
New Assembly: data1
establishing parallel connection:
Assembly: data1
[####################] 100% 0:00:04 | sorting reads | s1 |
[####################] 100% 0:00:01 | writing/compressing | s1 |
In [3]:
# the rename dictionary is applied during merge
mergedict = {
"1A_0": "A",
"1B_0": "A",
"1C_0": "A",
"1D_0": "D",
}
merged = ip.merge("merged", data1, rename_dict=mergedict)
merged.run("234567", force=True, launch_client=True)
merged.stats
New Assembly: merged
establishing parallel connection:
Assembly: merged
[####################] 100% 0:00:00 | concatenating inputs | s2 |
[####################] 100% 0:00:03 | processing reads | s2 |
[####################] 100% 0:00:00 | concatenating | s3 |
[####################] 100% 0:00:02 | dereplicating | s3 |
[####################] 100% 0:00:01 | clustering/mapping | s3 |
[####################] 100% 0:00:00 | building clusters | s3 |
[####################] 100% 0:00:00 | chunking clusters | s3 |
[####################] 100% 0:00:07 | aligning clusters | s3 |
[####################] 100% 0:00:00 | concat clusters | s3 |
[####################] 100% 0:00:00 | calc cluster stats | s3 |
[####################] 100% 0:00:03 | inferring [H, E] | s4 |
[####################] 100% 0:00:00 | calculating depths | s5 |
[####################] 100% 0:00:00 | chunking clusters | s5 |
[####################] 100% 0:00:10 | consens calling | s5 |
[####################] 100% 0:00:00 | indexing alleles | s5 |
[####################] 100% 0:00:00 | concatenating inputs | s6 |
[####################] 100% 0:00:00 | clustering across | s6 |
[####################] 100% 0:00:00 | building clusters | s6 |
[####################] 100% 0:00:08 | aligning clusters | s6 |
[####################] 100% 0:00:02 | applying filters | s7 |
[####################] 100% 0:00:02 | building arrays | s7 |
[####################] 100% 0:00:00 | writing conversions | s7 |
[####################] 100% 0:00:00 | indexing vcf depths | s7 |
[####################] 100% 0:00:01 | writing vcf output | s7 |
Out[3]:
state
reads_raw
reads_passed_filter
clusters_total
clusters_hidepth
hetero_est
error_est
reads_consens
2E_0
6
20017
20017
1000
1000
0.001830
0.000766
1000
2F_0
6
19933
19933
1000
1000
0.001996
0.000755
1000
2G_0
6
20030
20030
1000
1000
0.001940
0.000763
1000
2H_0
6
20199
20199
1000
1000
0.001747
0.000756
1000
3I_0
6
19885
19885
1000
1000
0.001807
0.000758
1000
3J_0
6
19822
19822
1000
1000
0.001931
0.000776
1000
3K_0
6
19965
19965
1000
1000
0.002092
0.000766
1000
3L_0
6
20008
20008
1000
1000
0.002042
0.000748
1000
A
6
60041
60041
1000
1000
0.009826
0.000833
1000
D
6
19966
19966
1000
1000
0.001803
0.000761
1000
In [104]:
from ipyrad.assemble.write_outputs import *
import ipyparallel as ipp
ipyclient = ipp.Client()
step = Step7(merged, True, ipyclient)
In [105]:
step.split_clusters()
step.remote_process_chunks()
step.collect_stats()
step.store_file_handles()
step.remote_build_arrays_and_write_loci()
step.remote_write_outfiles()
[####################] 100% 0:00:03 | applying filters | s7 |
[####################] 100% 0:00:01 | building arrays | s7 |
[####################] 100% 0:00:00 | writing conversions | s7 |
In [106]:
step.remote_fill_depths()
[####################] 100% 0:00:00 | indexing vcf depths | s7 |
In [107]:
step.remote_build_vcf()
[####################] 100% 0:00:01 | writing vcf output | s7 |
In [91]:
filler.snpsmap[filler.snpsmap[:, 0] == 2]
Out[91]:
array([[ 2, 1],
[ 2, 74],
[ 2, 84]], dtype=uint32)
In [ ]:
In [102]:
#step.remote_fill_depths()
sample = step.data.samples["D"]
filler = VCF_filler(step.data, step.nsnps, sample)
# run function loop
for idx in range(len(filler.locbits)):
filler.localidx = 0
# locfill function
edges = np.load(filler.trimbits[idx])
inds = filler.indbits[idx]
filler.loclines = iter(open(filler.locbits[idx], 'r'))
while 1:
try:
filler.yield_loc()
except StopIteration:
break
filler.locsnps = filler.snpsmap[filler.snpsmap[:, 0] == filler.locidx]
filler.gtrim = edges[filler.localidx - 1]
# denovo enter catgs func
if (filler.locsnps.size) and (filler.sname in filler.names):
nidx = filler.names.index(filler.sname)
sidx = filler.sidxs[nidx]
tups = [[int(j) for j in i.split("-")] for i in sidx.split(":")]
seq = filler.seqs[nidx]
seqarr = np.array(list(seq))
print('idx', idx, 'locidx', filler.locidx - 1)
for snp in filler.locsnps[:, 1]:
print(snp, seq[snp])
ishift = seq[:snp].count('-')
for tup in tups:
cidx, coffset = tup
pos = snp + (coffset) - ishift
print(pos, (snp, filler.gtrim, coffset, ishift))
print(filler.catgs[cidx, pos])
if (pos >= 0) & (pos < filler.maxlen):
filler.vcfd[filler.snpidx] += filler.catgs[cidx, pos]
filler.snpidx += 1
print(seq)
print("")
else:
print("NOT HERE")
filler.snpidx += filler.locsnps.shape[0]
idx 0 locidx 0
10 G
15 (10, 5, 5, 0)
[ 0 0 0 22]
ACTCTCAGGCGTACGATTCGGTACAAGTGTTTTGCTCGTTGGTTGCTTTGACAAACGACGGTATAGCAACGACGAATCATAAGTGT
idx 0 locidx 1
1 G
6 (1, 5, 5, 0)
[ 0 0 0 17]
74 T
79 (74, 5, 5, 0)
[ 0 0 17 0]
84 G
89 (84, 5, 5, 0)
[ 0 0 0 17]
GGATTTGGGTCTGGACGGAGCCAGTTAGTTAAAGTCCGTGCCCCCACGGAATAACGGTAAAATATACAAAACATTAAAGCACTTGG
idx 0 locidx 2
21 T
26 (21, 5, 5, 0)
[ 0 0 18 0]
47 C
52 (47, 5, 5, 0)
[18 0 0 0]
63 T
68 (63, 5, 5, 0)
[ 0 0 18 0]
ATAAGGGTCTCTTCTAGCAAATCGGCGTGCGCTGATCCTGGAATGTCCGGTTGAAGATATGATTACAGTACAGCGTGCGGCGCTAA
idx 0 locidx 3
13 C
18 (13, 5, 5, 0)
[19 0 0 0]
18 G
23 (18, 5, 5, 0)
[ 0 0 0 19]
42 G
47 (42, 5, 5, 0)
[ 0 0 0 19]
47 G
52 (47, 5, 5, 0)
[ 0 0 0 19]
54 C
59 (54, 5, 5, 0)
[19 0 0 0]
60 A
65 (60, 5, 5, 0)
[ 0 19 0 0]
TTACTAAGTGGTTCAAGTGGTTACTGAAGGGATAAGAGACGGGGTCGGAGGCCTCCTGAAATGGGCGGAAAGCTCTCTAACAGGAA
idx 0 locidx 4
42 G
47 (42, 5, 5, 0)
[ 0 0 0 15]
46 A
51 (46, 5, 5, 0)
[ 0 15 0 0]
55 A
60 (55, 5, 5, 0)
[ 0 15 0 0]
61 C
66 (61, 5, 5, 0)
[15 0 0 0]
63 T
68 (63, 5, 5, 0)
[ 0 0 15 0]
64 C
69 (64, 5, 5, 0)
[15 0 0 0]
GTATAACTGAGCGGTGCGCACGAACAGACCTAGAGTTAGACTGAGAAGAAGCACAAGTACTCTTCCAAAGCCGGGGAGGGCCTGCA
idx 0 locidx 5
12 C
17 (12, 5, 5, 0)
[19 0 0 0]
22 A
27 (22, 5, 5, 0)
[ 0 19 0 0]
39 T
44 (39, 5, 5, 0)
[ 0 0 19 0]
67 T
72 (67, 5, 5, 0)
[ 0 0 19 0]
68 G
73 (68, 5, 5, 0)
[ 0 0 0 19]
72 A
77 (72, 5, 5, 0)
[ 0 19 0 0]
TTATTTAGTATTCAGATCGCGCAACAATCGAGGGTAAATTTCTTCATGCGCCATGCAACGCCCGTATTGCCAAAAGGTGCCGCGAT
idx 0 locidx 6
18 C
23 (18, 5, 5, 0)
[20 0 0 0]
25 G
30 (25, 5, 5, 0)
[ 0 0 0 20]
69 G
74 (69, 5, 5, 0)
[ 0 0 0 20]
AGGAGGCCCGTTGCTCCCCCGACAGGATCGTCGTAGCAGAACCTATAACCCCCGCTCACTCTATTTGGCGTACTTGAAGCTTGCCC
idx 0 locidx 7
26 T
31 (26, 5, 5, 0)
[ 0 0 22 0]
GGTAAGAACCTCACTGAGAGATTATATCCTTTAAGGGGATGATACTCCTGGAGCACACACGGTGCTACGATCGTCTCAAACACGTC
idx 0 locidx 8
14 A
19 (14, 5, 5, 0)
[ 0 21 0 0]
66 C
71 (66, 5, 5, 0)
[21 0 0 0]
80 G
85 (80, 5, 5, 0)
[ 0 0 0 21]
GCGTCGGGAAGGGCATTCTGGAGGACCAGCGATCTAGGCCCGTCGCGTTCCAATACTAGGCACACGCAGGGTACTCAGCAGCACCA
idx 0 locidx 9
18 G
23 (18, 5, 5, 0)
[ 0 0 0 24]
24 A
29 (24, 5, 5, 0)
[ 0 24 0 0]
30 G
35 (30, 5, 5, 0)
[ 0 0 0 24]
TACAAGTTCTCCTATTCCGGCAAAAAGCGGGGCTTAATTCTCGTGTTTCGTCACTGATTCGAGAGCCTAAACTAGTTAAGACTCGC
idx 0 locidx 10
16 G
21 (16, 5, 5, 0)
[ 0 0 0 23]
51 A
56 (51, 5, 5, 0)
[ 0 23 0 0]
53 T
58 (53, 5, 5, 0)
[ 0 0 23 0]
73 -
78 (73, 5, 5, 0)
[ 0 0 23 0]
77 A
81 (77, 5, 5, 1)
[ 0 23 0 0]
TCATGCCTCGAAGTGCGTTGTCTCCCCCCTCTAGTAGCATTGTAATGGTGCAATTTGATAGTCGTAAATAAAA-TGTAGAGTGGGG
idx 0 locidx 11
18 T
23 (18, 5, 5, 0)
[ 0 0 19 0]
TAAGGCCGGGCATATTAATCCAAACGAAAGAATTCATAAATTCGTTACTCTAGAGTAGGTCAGGTAGATCTTGATCGAGTGGAACA
idx 0 locidx 12
20 A
25 (20, 5, 5, 0)
[ 0 18 0 0]
24 C
29 (24, 5, 5, 0)
[18 0 0 0]
26 A
31 (26, 5, 5, 0)
[ 0 18 0 0]
45 T
50 (45, 5, 5, 0)
[ 0 0 18 0]
57 C
62 (57, 5, 5, 0)
[18 0 0 0]
ATTACATACCGCAAACGGTTATTCCCAGGCTACTCTCAGTAGGCGTAATACTGGAGTCACTCTTCTGGCATCGCGCCACTGGAGAC
idx 0 locidx 13
16 A
21 (16, 5, 5, 0)
[ 0 20 0 0]
63 C
68 (63, 5, 5, 0)
[20 0 0 0]
75 A
80 (75, 5, 5, 0)
[ 0 20 0 0]
80 T
85 (80, 5, 5, 0)
[ 0 0 20 0]
TAATGGGCTTGTGATGAGAGCCACAGCAGGAGACTTGCGGTGCCGTTCAAGGCCTCGTTCCGTCCTGCACAGCCCACACGTTACTC
idx 0 locidx 14
19 C
24 (19, 5, 5, 0)
[22 0 0 0]
35 A
40 (35, 5, 5, 0)
[ 0 22 0 0]
53 T
58 (53, 5, 5, 0)
[ 0 0 22 0]
63 A
68 (63, 5, 5, 0)
[ 0 22 0 0]
69 A
74 (69, 5, 5, 0)
[ 0 22 0 0]
79 C
84 (79, 5, 5, 0)
[22 0 0 0]
83 T
88 (83, 5, 5, 0)
[ 0 0 22 0]
CGTATAATGATCTTAGTGACCTGACTACTGCGGCCACTGCCGCGTAATGATGGTCCAACTCCAAGCGACAGGTTCAGAACCAATCG
idx 0 locidx 15
18 W
23 (18, 5, 5, 0)
[ 0 10 10 0]
35 A
39 (35, 5, 5, 1)
[ 0 20 0 0]
72 T
76 (72, 5, 5, 1)
[ 0 0 20 0]
78 T
82 (78, 5, 5, 1)
[ 0 0 20 0]
83 G
87 (83, 5, 5, 1)
[ 0 0 0 20]
AACATGAGCATTAAAGTGWATAGAGTATT-CCAACAGTGTGCGTCGATTAAATAAGCACTACTAGCGATGATTATTTATTCGAGCG
idx 0 locidx 16
17 T
22 (17, 5, 5, 0)
[ 0 0 21 0]
50 C
55 (50, 5, 5, 0)
[21 0 0 0]
69 G
74 (69, 5, 5, 0)
[ 0 0 0 21]
CCGTTCAAGTGAGTATGTAACAGAACTCAGCAAACACGAGCGCGCTTTCTCAAAGACATGAGCGGAGAGGACACAAGGTCCGCTGA
idx 0 locidx 17
4 A
9 (4, 5, 5, 0)
[ 0 17 0 0]
5 A
10 (5, 5, 5, 0)
[ 0 17 0 0]
10 T
15 (10, 5, 5, 0)
[ 0 0 17 0]
19 C
24 (19, 5, 5, 0)
[17 0 0 0]
52 T
57 (52, 5, 5, 0)
[ 0 0 17 0]
58 T
63 (58, 5, 5, 0)
[ 0 0 17 0]
AGCTAACATTTTCAAAGTGCGAGGTCTTACCTGTGCAATCACCCTTAGTTCATACCCGTGTCGACATTGCTTCCGCTATAAGGATT
idx 0 locidx 18
15 C
20 (15, 5, 5, 0)
[19 0 0 0]
39 A
44 (39, 5, 5, 0)
[ 0 19 0 0]
GCGATGTACTTAAAACCGTTATTCAGGGGCATCGTTACAATTTACTCCAGTAGCGTCCGTACAACTTGTAAGCCATCGTCTCTGAC
idx 0 locidx 19
1 A
6 (1, 5, 5, 0)
[ 0 17 0 0]
21 A
26 (21, 5, 5, 0)
[ 0 17 0 0]
31 T
36 (31, 5, 5, 0)
[ 0 0 17 0]
59 T
64 (59, 5, 5, 0)
[ 0 0 17 0]
81 T
86 (81, 5, 5, 0)
[ 0 0 17 0]
83 T
88 (83, 5, 5, 0)
[ 0 0 17 0]
GAGATTCACTGGAGGCACGTCAGGTTGATATTGTCTAACGGTGGCCACGTTGCTAATTTTCCCAGATGTTCGTCCATCACTTATAG
idx 0 locidx 20
10 A
15 (10, 5, 5, 0)
[ 0 13 0 0]
42 T
47 (42, 5, 5, 0)
[ 0 0 13 0]
GGGAGCGATTAGGGCCGTGAACATCTTTCAGGTTCGCGCCCATCTCGGTGTCCGTGTGCTCTGAGTCGACAATGCGATACGCTCTC
idx 0 locidx 21
1 A
6 (1, 5, 5, 0)
[ 0 19 0 0]
6 G
11 (6, 5, 5, 0)
[ 0 0 0 19]
28 C
33 (28, 5, 5, 0)
[19 0 0 0]
46 G
51 (46, 5, 5, 0)
[ 0 0 0 19]
AATACGGGACCACAAGGGAAGCTTGCCCCCCTGCGTCATATCCTGGGACCTGGACCCTACTCTGAGCATTCAGTACGTCGCGGGCT
idx 0 locidx 22
17 T
22 (17, 5, 5, 0)
[ 0 0 21 0]
50 G
55 (50, 5, 5, 0)
[ 0 0 0 21]
58 G
63 (58, 5, 5, 0)
[ 0 0 0 21]
GCACGTATTTTATCGCTTAGTATAGTAGAATCGATACCCGTTCACGCAGTGGACGGCCGACCTTCTCTTGTTCGTTTTGATCCCTG
idx 0 locidx 23
4 G
9 (4, 5, 5, 0)
[ 0 0 0 19]
20 T
25 (20, 5, 5, 0)
[ 0 0 19 0]
55 G
60 (55, 5, 5, 0)
[ 0 0 0 19]
69 G
74 (69, 5, 5, 0)
[ 0 0 0 19]
84 C
89 (84, 5, 5, 0)
[19 0 0 0]
TATCGATGTCTGATGCGTCCTTACCAGTAAGATTTTCAGGATAGATGCGGATTACGCCAAGCTACAGTAGTAGGGGTCTGCGCTCA
idx 0 locidx 24
62 G
67 (62, 5, 5, 0)
[ 0 0 0 25]
67 G
72 (67, 5, 5, 0)
[ 0 0 0 25]
TAGCAGACGTCCCGATGGAAGGCACACGTACCCCGCTTAGTGAGATTGGCATTAGGACTCTGGATCCGGAGAACTTGACGTTCTGT
idx 0 locidx 25
9 G
14 (9, 5, 5, 0)
[ 0 0 0 23]
13 G
18 (13, 5, 5, 0)
[ 0 0 0 23]
42 T
47 (42, 5, 5, 0)
[ 0 0 23 0]
50 C
55 (50, 5, 5, 0)
[23 0 0 0]
72 C
77 (72, 5, 5, 0)
[23 0 0 0]
CTAGCGTTTGTTCGGCGCATAGCCTCCCATATCACCGAGTGCTCGATGCGCAAGTGGGACACCTCCCCCCTACGCGGCTCATAAAA
idx 0 locidx 26
36 A
41 (36, 5, 5, 0)
[ 0 17 0 0]
47 A
52 (47, 5, 5, 0)
[ 0 17 0 0]
51 C
56 (51, 5, 5, 0)
[17 0 0 0]
57 T
62 (57, 5, 5, 0)
[ 0 0 17 0]
58 C
63 (58, 5, 5, 0)
[17 0 0 0]
71 A
76 (71, 5, 5, 0)
[ 0 17 0 0]
GTAGAGCTCCACGGCCCTTATGCCGGAGGAGGTCTTAATGACCCCCGAGCACGGCCGTCAATCGTTAAACTAAATAACTCACAGAC
idx 0 locidx 27
2 G
7 (2, 5, 5, 0)
[ 0 0 0 18]
TCGGTAATGGTATTAGCACGTCCATTAACCTTTTAAGTTATACGACAGCCAGCGGAGATACAGTCGGAAATGCCCAAATGAAATCG
idx 0 locidx 28
6 C
11 (6, 5, 5, 0)
[21 0 0 0]
20 T
25 (20, 5, 5, 0)
[ 0 0 21 0]
57 G
62 (57, 5, 5, 0)
[ 0 0 0 21]
60 G
65 (60, 5, 5, 0)
[ 0 0 0 21]
CGCTAACGGACTTATTTTGTTACTAAGGGGTGTCCCAGGCTCTTCTCCTGTAGGTCTGAAGCTTCAATGGGCAATGAAATACTCTT
idx 0 locidx 29
45 G
50 (45, 5, 5, 0)
[ 0 0 0 24]
68 G
73 (68, 5, 5, 0)
[ 0 0 0 24]
82 C
87 (82, 5, 5, 0)
[24 0 0 0]
85 G
90 (85, 5, 5, 0)
[ 0 0 0 24]
TATTCACGTTTTACATCCTTCTGTGATTGGAGTAAATTACAGTCTGCCTCGTTGTATAACTGTGCAAAGCCCGCTACACGAACCAG
idx 0 locidx 30
1 G
6 (1, 5, 5, 0)
[ 0 0 0 23]
5 G
10 (5, 5, 5, 0)
[ 0 0 0 23]
36 C
41 (36, 5, 5, 0)
[23 0 0 0]
39 T
44 (39, 5, 5, 0)
[ 0 0 23 0]
51 T
56 (51, 5, 5, 0)
[ 0 0 23 0]
52 C
57 (52, 5, 5, 0)
[23 0 0 0]
67 G
72 (67, 5, 5, 0)
[ 0 0 0 23]
TGTGGGCCGGACCCACGTGCTCAGGGCTGCTCGACGCCATTCCGTAGAAAGTCGTGCCCCAAAGTCCGCGTCGCTTCCTAACCATT
idx 0 locidx 31
16 G
21 (16, 5, 5, 0)
[ 0 0 0 19]
26 G
31 (26, 5, 5, 0)
[ 0 0 0 19]
27 C
32 (27, 5, 5, 0)
[19 0 0 0]
48 G
53 (48, 5, 5, 0)
[ 0 0 0 19]
61 A
66 (61, 5, 5, 0)
[ 0 19 0 0]
74 T
79 (74, 5, 5, 0)
[ 0 0 19 0]
AGAAGGTAACCAGCTGGCTACCACCGGCGCTCTTCTATTCCTACTAGGGACATCTAAGAAAATCTTCTTGCCGGTCAATTTGTGAT
idx 0 locidx 32
13 T
18 (13, 5, 5, 0)
[ 0 0 20 0]
14 T
19 (14, 5, 5, 0)
[ 0 0 20 0]
19 A
24 (19, 5, 5, 0)
[ 0 20 0 0]
24 T
29 (24, 5, 5, 0)
[ 0 0 20 0]
29 G
34 (29, 5, 5, 0)
[ 0 0 0 20]
44 C
49 (44, 5, 5, 0)
[20 0 0 0]
46 C
51 (46, 5, 5, 0)
[20 0 0 0]
AGCCACCGTCGAATTAAGTAGGTCTGTATGGGCGAATTGACATTCCCATTACTGCGCCCTAATACCTTTTGCGCAATCAGGGATGA
idx 0 locidx 33
12 R
17 (12, 5, 5, 0)
[ 0 12 0 9]
20 T
25 (20, 5, 5, 0)
[ 0 0 21 0]
22 T
27 (22, 5, 5, 0)
[ 0 0 21 0]
23 A
28 (23, 5, 5, 0)
[ 0 21 0 0]
31 C
36 (31, 5, 5, 0)
[21 0 0 0]
34 T
39 (34, 5, 5, 0)
[ 0 0 21 0]
50 C
55 (50, 5, 5, 0)
[21 0 0 0]
53 A
58 (53, 5, 5, 0)
[ 0 21 0 0]
AGGAATTACCGCRTTAGCCCTCTACTATATGCATTTATCCGATTAACGCACCTAGAATGACACCCAATTTGGTGCCGTTTCCGGTC
idx 0 locidx 34
26 T
31 (26, 5, 5, 0)
[ 0 0 21 0]
47 T
52 (47, 5, 5, 0)
[ 0 0 21 0]
52 M
57 (52, 5, 5, 0)
[10 11 0 0]
63 A
68 (63, 5, 5, 0)
[ 0 21 0 0]
65 A
70 (65, 5, 5, 0)
[ 0 21 0 0]
83 G
88 (83, 5, 5, 0)
[ 0 0 0 21]
CTGAACAAACCGGGGATCGTGTGGGTTGCTCCTTAACTCGGGCTCGGTTCTTMTGCGTAGGCTACACCGATCAAAACCAGGTAGCG
idx 0 locidx 35
20 G
25 (20, 5, 5, 0)
[ 0 0 0 20]
27 G
32 (27, 5, 5, 0)
[ 0 0 0 20]
41 A
46 (41, 5, 5, 0)
[ 0 20 0 0]
48 T
53 (48, 5, 5, 0)
[ 0 0 20 0]
67 G
72 (67, 5, 5, 0)
[ 0 0 0 20]
72 A
77 (72, 5, 5, 0)
[ 0 20 0 0]
76 G
81 (76, 5, 5, 0)
[ 0 0 0 20]
TGGACGTAGGCATGTGGCAAGCACTACGCACCTACGCCAGAACGCTACTCGCGGGTGTGAAATTACTGTAATACTGGACTATATTC
idx 0 locidx 36
15 A
20 (15, 5, 5, 0)
[ 0 18 0 0]
31 A
36 (31, 5, 5, 0)
[ 0 18 0 0]
35 G
40 (35, 5, 5, 0)
[ 0 0 0 18]
52 G
57 (52, 5, 5, 0)
[ 0 0 0 18]
81 T
86 (81, 5, 5, 0)
[ 0 0 18 0]
AACAAATTGCGCACGACTGCAGAGCCTCTCCACAGGCTGAGCCCTGTGCCATGCTGCACTAAAAGAGTACCGGCGAATCGATCGCA
idx 0 locidx 37
3 T
8 (3, 5, 5, 0)
[ 0 0 18 0]
10 C
15 (10, 5, 5, 0)
[18 0 0 0]
39 T
44 (39, 5, 5, 0)
[ 0 0 18 0]
48 G
53 (48, 5, 5, 0)
[ 0 0 0 18]
56 A
61 (56, 5, 5, 0)
[ 0 18 0 0]
68 G
73 (68, 5, 5, 0)
[ 0 0 0 18]
ACTTGGTAATCGAGATTAATGGAAGGTACGCGGGTCTTATCATGGGAGGCCAGATCACATGAAGTGAGGATGTACTACGAGACCAT
idx 0 locidx 38
1 A
6 (1, 5, 5, 0)
[ 0 21 0 0]
4 T
9 (4, 5, 5, 0)
[ 0 0 21 0]
6 A
11 (6, 5, 5, 0)
[ 0 21 0 0]
66 C
71 (66, 5, 5, 0)
[21 0 0 0]
GACATCATGGGGCAGTCTTCTGACGGCGTCCTGACCGGTATTGCGCAACTAAACTTTGGCCCATTTCAATAACACATGAAGCCCCG
idx 0 locidx 39
14 G
19 (14, 5, 5, 0)
[ 0 0 0 21]
16 G
21 (16, 5, 5, 0)
[ 0 0 0 21]
24 G
29 (24, 5, 5, 0)
[ 0 0 0 21]
39 A
44 (39, 5, 5, 0)
[ 0 21 0 0]
60 A
65 (60, 5, 5, 0)
[ 0 21 0 0]
TTCCGGATCAGGCTGCGCGTTGGGGTGGAATTGGCACGGATCCGTGCGCGGGCTGCAACAATTAGATCCCACTCCGGATCTGCTGG
idx 0 locidx 40
24 C
29 (24, 5, 5, 0)
[20 0 0 0]
32 T
37 (32, 5, 5, 0)
[ 1 0 19 0]
36 A
41 (36, 5, 5, 0)
[ 0 20 0 0]
47 A
52 (47, 5, 5, 0)
[ 0 20 0 0]
56 A
61 (56, 5, 5, 0)
[ 0 20 0 0]
59 A
64 (59, 5, 5, 0)
[ 0 20 0 0]
60 G
65 (60, 5, 5, 0)
[ 0 0 0 20]
63 C
68 (63, 5, 5, 0)
[20 0 0 0]
TACTAGTCACAACTTCACTGCGTCCCAATAACTGCCAGTACCCAGCCAGTTTAAGTAAGAGGTCTTGGGACAATGGACGAATGGCC
idx 0 locidx 41
1 A
6 (1, 5, 5, 0)
[ 0 18 0 0]
2 T
7 (2, 5, 5, 0)
[ 0 0 18 0]
42 T
47 (42, 5, 5, 0)
[ 0 0 18 0]
59 A
64 (59, 5, 5, 0)
[ 0 18 0 0]
60 C
65 (60, 5, 5, 0)
[18 0 0 0]
71 T
76 (71, 5, 5, 0)
[ 0 0 18 0]
81 A
86 (81, 5, 5, 0)
[ 0 18 0 0]
GATAGATCGGAAAGGAGATGGAGTGGGGCTGTAGAAGGCCCCTAATTGCATAGCTAAGAACAGTTGAAGCATTCATCTACTAAGGT
idx 0 locidx 42
13 C
18 (13, 5, 5, 0)
[17 0 0 0]
16 A
21 (16, 5, 5, 0)
[ 0 17 0 0]
23 A
28 (23, 5, 5, 0)
[ 0 17 0 0]
61 T
66 (61, 5, 5, 0)
[ 0 0 17 0]
73 C
78 (73, 5, 5, 0)
[17 0 0 0]
TTGATTAGAAGAGCATACAGCTCAAGTCCAATGTAGGATGGGGCGTATTAGATGCTACTCCTCCATACACGATCTCTATTGAAGGT
idx 0 locidx 43
3 M
8 (3, 5, 5, 0)
[9 7 0 0]
8 G
13 (8, 5, 5, 0)
[ 0 0 0 16]
17 T
22 (17, 5, 5, 0)
[ 0 0 16 0]
19 G
24 (19, 5, 5, 0)
[ 0 0 0 16]
32 T
37 (32, 5, 5, 0)
[ 0 0 16 0]
43 A
48 (43, 5, 5, 0)
[ 0 16 0 0]
54 T
59 (54, 5, 5, 0)
[ 0 0 16 0]
59 T
64 (59, 5, 5, 0)
[ 0 0 16 0]
CATMAGTAGCTCGAGCCTGGGGAGGAACCTATTCGGGGGTCTCACCGCCTAACCTGCTCTGATTCAAGAAGTGGCCTATCTCCTTT
idx 0 locidx 44
31 T
36 (31, 5, 5, 0)
[ 0 0 13 0]
33 T
38 (33, 5, 5, 0)
[ 0 0 13 0]
62 T
67 (62, 5, 5, 0)
[ 0 0 13 0]
66 G
71 (66, 5, 5, 0)
[ 0 0 0 13]
70 C
75 (70, 5, 5, 0)
[12 1 0 0]
84 C
89 (84, 5, 5, 0)
[13 0 0 0]
TAAAAGGCACCCCATAACAGATCATGCCGATTATAGTCAACGACTTAGTCAGTAACTTGCGGTTATGGGTCCACAACAAGATTCCG
idx 0 locidx 45
7 C
12 (7, 5, 5, 0)
[26 0 0 0]
8 T
13 (8, 5, 5, 0)
[ 0 1 25 0]
34 A
39 (34, 5, 5, 0)
[ 0 26 0 0]
37 G
42 (37, 5, 5, 0)
[ 0 0 0 26]
40 A
45 (40, 5, 5, 0)
[ 0 26 0 0]
43 G
48 (43, 5, 5, 0)
[ 0 0 0 26]
CGAAAAGCTCCGGGGCGGATCAATCTGTCTGTCGACAGCCATAGGTATGTCAACCCGTCGAAGCATACAGAACACCCATAACTACG
idx 0 locidx 46
31 G
36 (31, 5, 5, 0)
[ 0 0 0 23]
65 T
70 (65, 5, 5, 0)
[ 0 0 23 0]
GACAACGATTTACCCCGCTGATGCGCGCCAAGGCTTATTGTGATTTTCAAGTAAGGTTATAACGTTAGCGCCGCCGTAAGTTTCGC
idx 0 locidx 47
65 A
70 (65, 5, 5, 0)
[ 0 18 0 0]
CTTGGGCAAGAGCAACGTGCCGCTGAGGAGATCAGCTCCTCACCCCCCTTTATCAACCAATTGAGAGACGCGTCCATCGAAACCCC
idx 0 locidx 48
33 G
38 (33, 5, 5, 0)
[ 0 0 0 23]
34 G
39 (34, 5, 5, 0)
[ 0 0 0 23]
54 T
59 (54, 5, 5, 0)
[ 0 0 23 0]
82 G
87 (82, 5, 5, 0)
[ 0 0 0 23]
84 C
89 (84, 5, 5, 0)
[23 0 0 0]
TCCTATTTGTGACGGTCTAGTACCCGTATCCATGGTTATTTTCTGCAACGCGTATATTGGACGACCCCGGCTGAACTAGATCGTCA
idx 0 locidx 49
31 A
36 (31, 5, 5, 0)
[ 0 21 0 0]
55 S
60 (55, 5, 5, 0)
[10 0 0 11]
58 T
63 (58, 5, 5, 0)
[ 0 0 21 0]
TATGAAATCACCGTCCTTCGTACATAAACTGACCCAACGGCTCGCTTGATCGTGCSGCTCTGAGACCGTGCAAACGCGGGTTCCTT
idx 1 locidx 50
48 T
53 (48, 5, 5, 0)
[ 0 0 19 0]
69 G
74 (69, 5, 5, 0)
[ 0 0 0 19]
81 C
86 (81, 5, 5, 0)
[19 0 0 0]
AGCACAGGTCGAACCCATGCGGTCCTAGGTACCCTGCGTTCATGGGAGTTATCTCATCTCATGCTTTCCGGGTTATTTAAACAGTC
idx 1 locidx 51
27 T
32 (27, 5, 5, 0)
[ 0 0 24 0]
29 A
34 (29, 5, 5, 0)
[ 0 24 0 0]
44 C
49 (44, 5, 5, 0)
[24 0 0 0]
50 T
55 (50, 5, 5, 0)
[ 0 0 24 0]
CTTTCCCGTCGTGTCGGAAGACACCTGTAAAGGTCGGAAACAGCCAGATGTGCTTACACAACGCCTGAGGTACGTCGACTTTAGGG
idx 1 locidx 52
29 C
34 (29, 5, 5, 0)
[21 0 0 0]
55 C
60 (55, 5, 5, 0)
[21 0 0 0]
56 T
61 (56, 5, 5, 0)
[ 0 0 21 0]
61 G
66 (61, 5, 5, 0)
[ 0 0 0 21]
62 C
67 (62, 5, 5, 0)
[21 0 0 0]
69 G
74 (69, 5, 5, 0)
[ 0 0 0 21]
TTGAACACTTTAGAAGAAACCTGGTATCCCAATCGACATCATGGGTATGTGGTCCCTATAAGCTCATGCGACCGAGCCATGTCGTA
idx 1 locidx 53
36 T
41 (36, 5, 5, 0)
[ 0 0 28 0]
81 T
86 (81, 5, 5, 0)
[ 0 0 28 0]
83 A
88 (83, 5, 5, 0)
[ 0 28 0 0]
AAAGGATGGATTTGGCGCCGACACCTATATTGGCACTGTCTGAGACAATCTCAGCTAAATGTGCCGCGATCTCCTTGAACTTTATC
idx 1 locidx 54
7 T
12 (7, 5, 5, 0)
[ 0 0 23 0]
12 T
17 (12, 5, 5, 0)
[ 0 0 23 0]
44 G
49 (44, 5, 5, 0)
[ 0 0 0 23]
63 T
68 (63, 5, 5, 0)
[ 0 0 23 0]
65 C
70 (65, 5, 5, 0)
[23 0 0 0]
74 T
79 (74, 5, 5, 0)
[ 0 0 23 0]
CACGAAGTTAACTTCAACCCTCGCCACTACTGCGTACAAAACGCGAGAGGTCTCCATGAGTGTTGCATCCGCTGTGGTGGTTACAT
idx 1 locidx 55
22 T
27 (22, 5, 5, 0)
[ 0 0 17 0]
72 G
77 (72, 5, 5, 0)
[ 0 0 0 17]
80 G
85 (80, 5, 5, 0)
[ 0 0 0 17]
AATAACTAGCAGACGGAGAAATTTCATTATTCGGTTTGTCTACAAAAGATTCTTTTTCACTAGTTAGGTCTGGCTGTTCCGATTGC
idx 1 locidx 56
63 A
68 (63, 5, 5, 0)
[ 0 17 0 0]
66 C
71 (66, 5, 5, 0)
[17 0 0 0]
81 T
86 (81, 5, 5, 0)
[ 0 0 17 0]
CATGCTTTAACCAGTTACGCCGACCGATTTGTAGCGAGCTATAATAAAAGTCGCTATTCGGTAACTCTTGCTGCTATATGGTGGAA
idx 1 locidx 57
7 G
12 (7, 5, 5, 0)
[ 0 0 0 17]
34 C
39 (34, 5, 5, 0)
[17 0 0 0]
38 A
43 (38, 5, 5, 0)
[ 0 17 0 0]
42 A
47 (42, 5, 5, 0)
[ 0 17 0 0]
54 A
59 (54, 5, 5, 0)
[ 0 17 0 0]
66 A
71 (66, 5, 5, 0)
[ 0 17 0 0]
GGAGCTAGAAAGGCCGTCGTTAACAAAGTCGGCTCCAAAAGAATAGGTCATGGCACTGTTTAAGAGATATCCAATGTGGCCCTATT
idx 1 locidx 58
16 C
21 (16, 5, 5, 0)
[22 0 0 0]
22 G
27 (22, 5, 5, 0)
[ 0 0 0 22]
37 G
42 (37, 5, 5, 0)
[ 0 0 0 22]
39 T
44 (39, 5, 5, 0)
[ 0 0 22 0]
41 C
46 (41, 5, 5, 0)
[22 0 0 0]
42 G
47 (42, 5, 5, 0)
[ 0 0 0 22]
48 A
53 (48, 5, 5, 0)
[ 0 22 0 0]
CTTTGGCGAGACGAGGCTATTCGTAAAGCAAGTTTATGATACGACCAAAAGTTCCCGAAAGTCACTACGTTGTAGATACACCAGCA
idx 1 locidx 59
11 T
16 (11, 5, 5, 0)
[ 0 0 23 0]
57 C
62 (57, 5, 5, 0)
[23 0 0 0]
62 T
67 (62, 5, 5, 0)
[ 0 0 23 0]
78 G
83 (78, 5, 5, 0)
[ 0 0 0 23]
82 G
87 (82, 5, 5, 0)
[ 0 0 0 23]
85 G
90 (85, 5, 5, 0)
[ 0 0 0 23]
GATGGGCGTGCTAGCCGGAGTTTCGCCCAACTTGTAACATGTTCTCTAGGGAATTTTCGATGTTGTAATCCAGAATCAGAAGGTGG
idx 1 locidx 60
43 C
48 (43, 5, 5, 0)
[16 0 0 0]
46 C
51 (46, 5, 5, 0)
[16 0 0 0]
65 G
70 (65, 5, 5, 0)
[ 0 0 0 16]
GTCCTTGAGGTGACGGCGTCGATTGACAATTGTATCCCAACTGCAGCACCCGTTTGGTATACCGCGTCCCTGAGTATCTGGATCAC
idx 1 locidx 61
3 G
8 (3, 5, 5, 0)
[ 0 0 0 21]
40 T
45 (40, 5, 5, 0)
[ 0 0 21 0]
58 C
63 (58, 5, 5, 0)
[21 0 0 0]
68 T
73 (68, 5, 5, 0)
[ 0 0 21 0]
69 G
74 (69, 5, 5, 0)
[ 0 0 0 21]
82 A
87 (82, 5, 5, 0)
[ 0 21 0 0]
GACGAGTGGACTCAACGCTAGCTGCCTTTATCAGCAGTTTTAAAGAAACTATCGTGCCCTCATAGTTGTGTAAGTCTGTGCCAGGC
idx 1 locidx 62
10 A
15 (10, 5, 5, 0)
[ 0 19 0 0]
13 C
18 (13, 5, 5, 0)
[19 0 0 0]
52 A
57 (52, 5, 5, 0)
[ 0 19 0 0]
CCAACCCGGCATCCCATCCGCTCTAGCAGCTGATGTGACAATCTTATTACAGACATCGCTACAGCGGTTATGACCCGTTCGCCTCA
idx 1 locidx 63
7 A
12 (7, 5, 5, 0)
[ 0 17 0 0]
9 G
14 (9, 5, 5, 0)
[ 0 0 0 17]
11 A
16 (11, 5, 5, 0)
[ 0 17 0 0]
25 G
30 (25, 5, 5, 0)
[ 0 0 0 17]
62 C
67 (62, 5, 5, 0)
[17 0 0 0]
GGCGCTGACGGATTTTGCTCAGTTAGACCAGCAATGCTGCCTTGACATACTAAAAAGACTAGCTCCACTCAAATTAGACACGATAA
idx 1 locidx 64
27 G
32 (27, 5, 5, 0)
[ 0 0 0 19]
39 T
44 (39, 5, 5, 0)
[ 0 0 19 0]
40 A
45 (40, 5, 5, 0)
[ 0 19 0 0]
46 A
51 (46, 5, 5, 0)
[ 0 19 0 0]
65 G
70 (65, 5, 5, 0)
[ 0 0 0 19]
75 G
80 (75, 5, 5, 0)
[ 0 0 0 19]
CATTGAGATCAGCACGACTAATACCAAGTATCAGGACCATACTGTGAGATGGCCGGAACAGACATGTAAGAATGGGGTTACAGGGA
idx 1 locidx 65
7 G
12 (7, 5, 5, 0)
[ 0 1 0 19]
15 C
20 (15, 5, 5, 0)
[20 0 0 0]
36 T
41 (36, 5, 5, 0)
[ 0 0 20 0]
GTGGTATGTATATCTCGGCCGGACCTACCACCCGTCTAATATCCACTAAATAGTCCCAGTTGCATGAGCCCAGCCTTGAGAAAAAC
idx 1 locidx 66
22 A
27 (22, 5, 5, 0)
[ 0 23 0 0]
47 G
52 (47, 5, 5, 0)
[ 0 0 0 23]
59 T
64 (59, 5, 5, 0)
[ 0 0 23 0]
AGATGCACGGTAGCGTTTTGCGAATTGCACACGTTGTGGTTCAGTAAGAGAATCTGACGTGGTCGCTGTGAAATGTAGAACTAGGT
idx 1 locidx 67
5 C
10 (5, 5, 5, 0)
[22 0 0 0]
35 C
40 (35, 5, 5, 0)
[22 0 0 0]
56 G
61 (56, 5, 5, 0)
[ 0 0 0 22]
84 C
89 (84, 5, 5, 0)
[22 0 0 0]
GCGAGCCATACCGTGCCGTAGCGACGAATCAGTTGCTGCTAAAGTGTGAGATATCGGACGGAGGTACTCAATCGTGTGCTCACACA
idx 1 locidx 68
51 G
56 (51, 5, 5, 0)
[ 0 0 0 21]
84 C
89 (84, 5, 5, 0)
[21 0 0 0]
AAATTATGAAATTATGCGAAACTTAAAGACGTATCGGTTGGCAGCGGCACTGCTCCCGAGGAGTCCGTGCCTTTGCCAATAATGCC
idx 1 locidx 69
9 G
14 (9, 5, 5, 0)
[ 0 0 0 22]
29 C
34 (29, 5, 5, 0)
[22 0 0 0]
52 C
57 (52, 5, 5, 0)
[22 0 0 0]
54 C
59 (54, 5, 5, 0)
[22 0 0 0]
67 A
72 (67, 5, 5, 0)
[ 0 22 0 0]
73 T
78 (73, 5, 5, 0)
[ 0 0 22 0]
78 G
83 (78, 5, 5, 0)
[ 0 0 0 22]
CCACGTTGTGAGCGACTACTCAGCTTCACCTGCTCTCAAGTGAGCCGTCGACCACCTACTGCGTTCGACACTGTGCGAGCGAGCCT
idx 1 locidx 70
16 A
21 (16, 5, 5, 0)
[ 0 23 0 0]
24 A
29 (24, 5, 5, 0)
[ 0 23 0 0]
25 A
30 (25, 5, 5, 0)
[ 0 23 0 0]
40 G
45 (40, 5, 5, 0)
[ 0 0 0 23]
79 C
84 (79, 5, 5, 0)
[23 0 0 0]
82 A
87 (82, 5, 5, 0)
[ 0 23 0 0]
CCATCCCTGTGTGGCTACCTATCGAATTGGTAGCGCGTGGGTACTGGACAACTGTGTGTTCTGCTCGTTCCGCATTAGACACACGT
idx 1 locidx 71
9 A
14 (9, 5, 5, 0)
[ 0 22 0 0]
19 A
24 (19, 5, 5, 0)
[ 0 22 0 0]
22 C
27 (22, 5, 5, 0)
[22 0 0 0]
50 G
55 (50, 5, 5, 0)
[ 0 0 0 22]
CTGCGAATAAACCCATTGGACCCGCACCTACTCGTTACACGAGCAGAATCGCACCTTTAGACAGCGCAGCTGGACATCCCAACGAC
idx 1 locidx 72
19 C
24 (19, 5, 5, 0)
[23 0 0 0]
68 G
73 (68, 5, 5, 0)
[ 0 0 0 23]
85 G
90 (85, 5, 5, 0)
[ 0 0 0 23]
TATAACAAAGAACTATCAGCATTTGCTACGATCAACGGGATTGGAGCGCAGTTATGTGCTTGTAAGTAGAGTTTGCAGCGGGTATG
idx 1 locidx 73
66 W
71 (66, 5, 5, 0)
[ 0 12 6 0]
CCCGGTTGCTTCGGGGACTGTGCATCTAATTAATCTGTAGACCTAATGGTACCAGAAGTGTTTTAGWATGATGTGTACATCGTAGT
idx 1 locidx 74
8 A
13 (8, 5, 5, 0)
[ 0 23 0 0]
51 G
56 (51, 5, 5, 0)
[ 0 0 0 23]
54 A
59 (54, 5, 5, 0)
[ 0 23 0 0]
62 G
67 (62, 5, 5, 0)
[ 0 0 0 23]
TTGAAAGTACCGTATCTGCCTCAGTCCGCGGTCCAAAGCAGATATTTATTTGGGACCACGTTGCGTCCAAATGACGAGAGTCGGAG
idx 1 locidx 75
13 G
18 (13, 5, 5, 0)
[ 0 0 1 17]
32 K
37 (32, 5, 5, 0)
[ 0 0 8 10]
51 A
56 (51, 5, 5, 0)
[ 0 18 0 0]
58 G
63 (58, 5, 5, 0)
[ 0 0 0 18]
78 G
83 (78, 5, 5, 0)
[ 0 0 0 18]
CTTACATCAGCTCGGGCACAAAGGCCATCTTGKGGATGTTCGACGAGCTAAATTACTGGATTTGTATCCTCCGAGGATGGACCTTT
idx 1 locidx 76
17 C
22 (17, 5, 5, 0)
[20 0 0 0]
75 T
80 (75, 5, 5, 0)
[ 0 0 20 0]
GATAGAGTGGTACGTTTCCACTGCTGTCACTGAGGGGGCGATCTCTTTAGACCTTGCCCAGCACTCTGGCCGGACTAAGAGAGCGT
idx 1 locidx 77
2 A
7 (2, 5, 5, 0)
[ 0 25 0 0]
14 G
19 (14, 5, 5, 0)
[ 0 0 0 25]
30 T
35 (30, 5, 5, 0)
[ 0 0 25 0]
47 A
52 (47, 5, 5, 0)
[ 0 25 0 0]
70 A
75 (70, 5, 5, 0)
[ 0 25 0 0]
79 T
84 (79, 5, 5, 0)
[ 0 0 25 0]
CGAGCGTTTTCACAGACGCCGTTAAAAGGATCCCTTCGGAATATCCTACCTCTCCTCCAACGCCGCACGTATCGGGCTCTCCTGCT
idx 1 locidx 78
9 A
14 (9, 5, 5, 0)
[ 0 17 0 0]
22 G
27 (22, 5, 5, 0)
[ 0 0 0 17]
TGAGTCCCCACTTGTTTATCGTGGTGTGCCAATGTGGTGGTGCTTCCCCTCGGCAAGGATCTAGGCGGAGATAACGTACATGCTCA
idx 1 locidx 79
41 T
46 (41, 5, 5, 0)
[ 0 0 15 0]
46 T
51 (46, 5, 5, 0)
[ 0 0 15 0]
79 G
84 (79, 5, 5, 0)
[ 0 0 0 15]
CGACCCAAGACGGTGAGGAGGCGAACACCGTTGTAACGTCTTACAGTGTTCGGGGGTATATCAGACACCGCTGACGACTGGGGTCA
idx 1 locidx 80
15 A
20 (15, 5, 5, 0)
[ 0 25 0 0]
16 T
21 (16, 5, 5, 0)
[ 0 0 25 0]
20 G
25 (20, 5, 5, 0)
[ 0 0 0 25]
21 G
26 (21, 5, 5, 0)
[ 0 0 0 25]
31 T
36 (31, 5, 5, 0)
[ 0 0 25 0]
61 A
66 (61, 5, 5, 0)
[ 0 25 0 0]
85 A
90 (85, 5, 5, 0)
[ 0 25 0 0]
TGAAATATGCTGCTGATTATGGAGTGCTTGATTTTTTACGGCTTAACGCCTTTCTTCGCCTACCGGGGCGTGCTAGTATGCATTGA
idx 1 locidx 81
84 G
89 (84, 5, 5, 0)
[ 0 0 0 26]
CTGTTAGTATACGGCGACGTCTCGTGATTACCCTGGCTCGCGACGTGCTTGTATACCCCATCTTGGTTTGGGTGCAGGCCGCACGC
idx 1 locidx 82
25 T
30 (25, 5, 5, 0)
[ 0 0 20 0]
47 C
52 (47, 5, 5, 0)
[20 0 0 0]
GTGCTTGGCCACACGTATGTGCGCCTAGCCGCTGACAAGCGAACCTTCCCGAGCACTTGCACCCATTAATTTCTTATATTCAATGG
idx 1 locidx 83
0 T
5 (0, 5, 5, 0)
[ 0 0 22 0]
32 G
37 (32, 5, 5, 0)
[ 0 0 0 22]
37 A
42 (37, 5, 5, 0)
[ 0 22 0 0]
57 A
62 (57, 5, 5, 0)
[ 0 22 0 0]
TACACAGCAAGAATCTGGCCATACGGGGCACTGTATGAAACTGCTTGGATTTACGTTACTCAGTGGTAAACCCCCGGAAGCCGATA
idx 1 locidx 84
14 A
19 (14, 5, 5, 0)
[ 0 16 0 0]
26 A
31 (26, 5, 5, 0)
[ 0 16 0 0]
55 C
60 (55, 5, 5, 0)
[16 0 0 0]
85 T
90 (85, 5, 5, 0)
[ 0 1 15 0]
CGACCGAGGTGCTAAGTGGAACCTGAAGGCTGGAACTACTTTAACGGCACTGTCGCGCCATTAAGCAAAGATTACAGCCAACTCAT
idx 1 locidx 85
52 C
57 (52, 5, 5, 0)
[19 0 0 0]
71 C
76 (71, 5, 5, 0)
[19 0 0 0]
AAGGCGAGCACTCCCGCAATGTGCAACCAACGGCATTCCTGTGTGCGGAGACCCCTGATCAACGGCTCCCCCGCATCCCGCCTGGC
idx 1 locidx 86
2 T
7 (2, 5, 5, 0)
[ 0 0 21 0]
20 A
25 (20, 5, 5, 0)
[ 0 21 0 0]
36 C
41 (36, 5, 5, 0)
[21 0 0 0]
42 G
47 (42, 5, 5, 0)
[ 0 0 0 21]
67 G
72 (67, 5, 5, 0)
[ 0 0 0 21]
TCTCACTGCAGTGTGTAAAGACGTAGAAAATGGACCCTGATGGGTGAGCAAAGTTTTCATGTCCGCCGTCTATAAGCCATTGCTTT
idx 1 locidx 87
33 A
38 (33, 5, 5, 0)
[ 0 20 0 0]
61 T
66 (61, 5, 5, 0)
[ 0 0 20 0]
82 C
87 (82, 5, 5, 0)
[20 0 0 0]
CATATCCTGTTTTCCTAATTAAATGGGTGGTCGAGGAAGCGCCCTAACAGGGTTGATCAACTACCAAAGACTCGGTGGAACCCTAG
idx 1 locidx 88
7 T
12 (7, 5, 5, 0)
[ 0 0 21 0]
10 A
15 (10, 5, 5, 0)
[ 0 21 0 0]
58 C
63 (58, 5, 5, 0)
[21 0 0 0]
66 T
71 (66, 5, 5, 0)
[ 0 0 21 0]
AGCCCCTTTCACGATCAGTCACCACGCCCCGCATTGGTAGTCAAGGTTCTAGTTGTTCCGAAGCGCTAATCTGCGGACGTAAATTA
idx 1 locidx 89
22 C
27 (22, 5, 5, 0)
[22 0 0 0]
28 C
33 (28, 5, 5, 0)
[22 0 0 0]
35 C
40 (35, 5, 5, 0)
[22 0 0 0]
47 A
52 (47, 5, 5, 0)
[ 0 22 0 0]
58 T
63 (58, 5, 5, 0)
[ 0 0 22 0]
CTGAAGCTAACTTGCCACTAGTCACGCTCATCATGCCCGTAAGACTGAGGAGTGGCTGTACAGTCGCTAGATAGACAATACCGCAG
idx 1 locidx 90
23 T
28 (23, 5, 5, 0)
[ 0 0 22 0]
24 A
29 (24, 5, 5, 0)
[ 0 22 0 0]
33 G
38 (33, 5, 5, 0)
[ 0 0 0 22]
57 T
62 (57, 5, 5, 0)
[ 0 0 22 0]
63 G
68 (63, 5, 5, 0)
[ 0 0 0 22]
66 T
71 (66, 5, 5, 0)
[ 0 0 22 0]
GGGACTCCCTACCCCCTCAAAATTACCCGTTTTGTTTCCATCAGGTACAACGGAGGATGCACGGAGTAAGAGGGGCCACCGTAGGG
idx 1 locidx 91
2 C
7 (2, 5, 5, 0)
[22 0 0 0]
33 C
38 (33, 5, 5, 0)
[22 0 0 0]
80 C
85 (80, 5, 5, 0)
[22 0 0 0]
AACGCGTTCTTTTGTGTTTTTGCAAGTTAGGCGCTCGCAGCTGATTTAGATCAATACGACTCGTCTACTAGTAACAAAGGCATGGA
idx 1 locidx 92
23 T
28 (23, 5, 5, 0)
[ 0 0 22 0]
45 A
50 (45, 5, 5, 0)
[ 0 22 0 0]
47 G
52 (47, 5, 5, 0)
[ 0 0 0 22]
64 A
69 (64, 5, 5, 0)
[ 0 22 0 0]
75 G
80 (75, 5, 5, 0)
[ 0 0 0 22]
79 G
84 (79, 5, 5, 0)
[ 0 0 0 22]
85 G
90 (85, 5, 5, 0)
[ 0 0 0 22]
TCCGGTAGCATGGGTTGACTCTGTTCCTGTAAGGTGTGCTTAGGGAGGCAGCACTTCACCGTAAAGGCACAGCTGGTAAGGTTACG
idx 1 locidx 93
9 T
14 (9, 5, 5, 0)
[ 0 0 20 0]
14 C
19 (14, 5, 5, 0)
[20 0 0 0]
37 G
42 (37, 5, 5, 0)
[ 0 0 0 20]
53 T
58 (53, 5, 5, 0)
[ 0 0 20 0]
CATTAGGATTGGTCCACTTCGTCCAGCCCCTGGACATGGCGTTTATCTGATTGTGTTGTATTCACGTTGGGGTGCACCCAATGCCC
idx 1 locidx 94
16 A
21 (16, 5, 5, 0)
[ 0 23 0 0]
33 C
38 (33, 5, 5, 0)
[23 0 0 0]
50 A
55 (50, 5, 5, 0)
[ 0 23 0 0]
TTTTATTAACTTCGAAACCATTCCCACAGCGTACGTTAGAGCTTTGGGGAAATATGTATAAGGGCTGCGACTGGCGCTCGATGCTA
idx 1 locidx 95
15 C
20 (15, 5, 5, 0)
[19 0 0 0]
18 G
23 (18, 5, 5, 0)
[ 0 0 0 19]
23 G
28 (23, 5, 5, 0)
[ 0 0 0 19]
76 G
81 (76, 5, 5, 0)
[ 0 0 0 19]
AGGAAATAGTAACTCCACGGCTGGTGAGAACGTAAGGAGAGCCGCTACTATCCTCGCTTTTGGCCAACGAGTGCCTGATTCCTGTT
idx 1 locidx 96
30 G
35 (30, 5, 5, 0)
[ 0 0 0 24]
31 C
36 (31, 5, 5, 0)
[24 0 0 0]
51 G
56 (51, 5, 5, 0)
[ 0 0 0 24]
67 T
72 (67, 5, 5, 0)
[ 0 0 24 0]
GTTGTCAACCTTATCTTCTGGGGTCTTGGGGCGGACCTTCTGGGCCGCAGCGATGTTGAGTAAGCGATACATAAGTGGGCCCGCAG
idx 1 locidx 97
1 T
6 (1, 5, 5, 0)
[ 0 0 22 0]
4 A
9 (4, 5, 5, 0)
[ 0 22 0 0]
11 K
16 (11, 5, 5, 0)
[ 0 0 10 12]
50 T
55 (50, 5, 5, 0)
[ 0 0 22 0]
77 A
82 (77, 5, 5, 0)
[ 0 22 0 0]
ATGGATCTTACKCTAGCTGTGGTGGACCCGCGTTCTTTGGACTAGTAGGTTCCCCGCTCGTTCCGTTGTTTAACTCCATATAGCGT
idx 1 locidx 98
3 T
8 (3, 5, 5, 0)
[ 0 0 22 0]
10 A
15 (10, 5, 5, 0)
[ 0 22 0 0]
18 C
23 (18, 5, 5, 0)
[22 0 0 0]
23 T
28 (23, 5, 5, 0)
[ 0 0 22 0]
28 A
33 (28, 5, 5, 0)
[ 0 22 0 0]
39 T
44 (39, 5, 5, 0)
[ 0 0 22 0]
40 T
45 (40, 5, 5, 0)
[ 0 0 22 0]
66 C
71 (66, 5, 5, 0)
[22 0 0 0]
67 G
72 (67, 5, 5, 0)
[ 0 0 0 22]
GATTCTGTTCATCGGTGCCATCCTTAAGAAGAGTGAACATTCAAATCGAGTAAGTCGGTTCTGTAACGGGGTTCATATGCAAGGGG
idx 1 locidx 99
5 M
10 (5, 5, 5, 0)
[12 11 0 0]
40 K
45 (40, 5, 5, 0)
[ 0 0 12 11]
53 G
58 (53, 5, 5, 0)
[ 0 0 0 23]
55 Y
60 (55, 5, 5, 0)
[12 0 11 0]
67 C
72 (67, 5, 5, 0)
[23 0 0 0]
69 Y
74 (69, 5, 5, 0)
[12 0 11 0]
71 A
76 (71, 5, 5, 0)
[ 0 23 0 0]
75 T
80 (75, 5, 5, 0)
[ 0 0 23 0]
CCCCTMCGATAGGCAGGTTTGGCTGAGAGAAGTGTAGTACKCGCGTTGCTTGAGGYGAGGGCTGATCCGYCAAACTTAGATGGCCG
idx 2 locidx 100
3 A
8 (3, 5, 5, 0)
[ 0 15 0 0]
49 C
54 (49, 5, 5, 0)
[15 0 0 0]
54 A
59 (54, 5, 5, 0)
[ 0 15 0 0]
67 G
72 (67, 5, 5, 0)
[ 0 0 0 15]
CCAATATTGGCAAGGTCGTCTGATACGTGCCACTAGGCTCCTTTAACAGCTCCCAACTACATTGCCCGATCCCAAGTCTGCGGTTA
NOT HERE
NOT HERE
idx 2 locidx 103
10 G
15 (10, 5, 5, 0)
[ 0 0 0 17]
34 A
39 (34, 5, 5, 0)
[ 0 17 0 0]
46 C
51 (46, 5, 5, 0)
[17 0 0 0]
47 T
52 (47, 5, 5, 0)
[ 0 0 17 0]
60 C
65 (60, 5, 5, 0)
[17 0 0 0]
70 G
75 (70, 5, 5, 0)
[ 0 0 0 17]
CTTGGGCAGCGATCGGTAGGATCCGATACAGACTAGATCTGACATGCTAGAGTGGAAGGACCATCACCATGGCGATGTGTCGGCCC
idx 2 locidx 104
7 T
12 (7, 5, 5, 0)
[ 0 0 19 0]
20 G
25 (20, 5, 5, 0)
[ 0 0 0 19]
25 G
30 (25, 5, 5, 0)
[ 0 0 0 19]
31 A
36 (31, 5, 5, 0)
[ 0 19 0 0]
64 G
69 (64, 5, 5, 0)
[ 0 0 0 19]
73 T
78 (73, 5, 5, 0)
[ 0 0 19 0]
85 G
90 (85, 5, 5, 0)
[ 0 0 0 19]
CCCGGCCTGCACCCCGTTTCGTGTCGTCCATAGCATAAATCTCGGCATCGCGCGCCTGAAAGTAGCGGCTTGCTTGAACTTTACCG
idx 2 locidx 105
4 A
9 (4, 5, 5, 0)
[ 0 19 0 0]
15 C
20 (15, 5, 5, 0)
[19 0 0 0]
38 C
43 (38, 5, 5, 0)
[19 0 0 0]
AAAAAGCTACGCACTCGGACACCCCCTTTAACGAAATTCCGAACTCGAACGTCCGGGTCGGAACTCAAGAATCGGCGTTAGTTACT
idx 2 locidx 106
14 G
19 (14, 5, 5, 0)
[ 0 0 0 19]
23 T
28 (23, 5, 5, 0)
[ 0 0 19 0]
34 C
39 (34, 5, 5, 0)
[19 0 0 0]
84 C
89 (84, 5, 5, 0)
[19 0 0 0]
GCTTATAACAGCTGGGGACAACTTATCGCTCTTACAATAGGCGAATCAGTGTTATTACGTGGTAACGAGCTAATCATTCATCTCCC
idx 2 locidx 107
16 T
21 (16, 5, 5, 0)
[ 0 0 18 0]
45 T
50 (45, 5, 5, 0)
[ 0 0 18 0]
82 W
87 (82, 5, 5, 0)
[ 0 12 6 0]
TTGTCCATTTTCAAGTTAGTTAGCGAAAGACCAGTGTACTTACACTTGCCCCGGCCCGACCGACTCTAACTCGATGTAGGAGWTCT
idx 2 locidx 108
22 T
27 (22, 5, 5, 0)
[ 0 0 21 0]
34 C
39 (34, 5, 5, 0)
[21 0 0 0]
61 A
66 (61, 5, 5, 0)
[ 0 21 0 0]
69 T
74 (69, 5, 5, 0)
[ 0 0 21 0]
70 G
75 (70, 5, 5, 0)
[ 0 0 0 21]
ACGTTTCCTTACCATCCCAGCATAATGGGATCACCGGCAATTTCCCAAGGCGCGTCCGTCAAGACCACTTGACACTTTGTCGTTAT
idx 2 locidx 109
1 G
6 (1, 5, 5, 0)
[ 0 0 0 19]
2 T
7 (2, 5, 5, 0)
[ 0 0 19 0]
19 C
24 (19, 5, 5, 0)
[19 0 0 0]
31 A
36 (31, 5, 5, 0)
[ 0 19 0 0]
TGTTCACCTTAGATGTAGCCGCTAATGATGCAACCTTCAGTACGCTGTCGACTTATAGGCTGAAGCATATAGTGGGTTTGAGGAGT
idx 2 locidx 110
8 G
13 (8, 5, 5, 0)
[ 0 0 0 21]
33 A
38 (33, 5, 5, 0)
[ 0 21 0 0]
63 C
68 (63, 5, 5, 0)
[21 0 0 0]
GGCCCATAGCGCCGTTCCCAATAACAGAATAGTATGACCTGCGCTGTATAGGTAACCCCAATACAGTCCACGACCTATTATAGTCC
idx 2 locidx 111
4 A
9 (4, 5, 5, 0)
[ 0 25 0 0]
11 A
16 (11, 5, 5, 0)
[ 0 25 0 0]
29 T
34 (29, 5, 5, 0)
[ 0 0 25 0]
37 G
42 (37, 5, 5, 0)
[ 0 0 0 25]
43 T
48 (43, 5, 5, 0)
[ 0 0 25 0]
68 G
73 (68, 5, 5, 0)
[ 0 0 0 25]
74 C
79 (74, 5, 5, 0)
[25 0 0 0]
ACTCATGATGGACAATCGCTGCTAAAACGTTTATCCCGAAAAATACACCGCCGTCGATAAAGCCGGCGGACCGTCTTCTACGGGGC
idx 2 locidx 112
23 Y
28 (23, 5, 5, 0)
[12 0 4 0]
43 G
48 (43, 5, 5, 0)
[ 0 0 0 16]
58 C
63 (58, 5, 5, 0)
[16 0 0 0]
62 C
67 (62, 5, 5, 0)
[16 0 0 0]
85 W
90 (85, 5, 5, 0)
[ 0 12 4 0]
AGAAAGGTATGTTGACGTAGACTYACCAGTGCATCACTCGAGAGTGTTTCACGTTACTCCCGCAAGCGAGCCGCGCTCGTCCGCTW
idx 2 locidx 113
39 T
44 (39, 5, 5, 0)
[ 0 0 21 0]
43 T
48 (43, 5, 5, 0)
[ 0 0 21 0]
46 C
51 (46, 5, 5, 0)
[21 0 0 0]
84 T
89 (84, 5, 5, 0)
[ 0 0 21 0]
TGGGACATACTAGAAGGTAACGATCGATGGTTTGTAGGATCTATTCCTCAACCCTCGCTTGTATATACCTTTCCGGCCCGGATATC
idx 2 locidx 114
3 T
8 (3, 5, 5, 0)
[ 0 0 23 0]
18 G
23 (18, 5, 5, 0)
[ 0 0 0 23]
25 C
30 (25, 5, 5, 0)
[23 0 0 0]
39 M
44 (39, 5, 5, 0)
[12 11 0 0]
45 C
50 (45, 5, 5, 0)
[23 0 0 0]
65 T
70 (65, 5, 5, 0)
[ 0 0 23 0]
81 C
86 (81, 5, 5, 0)
[23 0 0 0]
83 G
88 (83, 5, 5, 0)
[ 0 0 0 23]
TAATGGACTCATCGTGCTGAGCTACCACCCTCCGTGTGTMCTATACTCCTCTGTTTGGAGGGATATATTCCCTATCACCATCCGGG
idx 2 locidx 115
4 T
9 (4, 5, 5, 0)
[ 0 0 15 0]
52 G
57 (52, 5, 5, 0)
[ 0 0 0 15]
70 A
75 (70, 5, 5, 0)
[ 0 15 0 0]
GTACTGTGATCCATTTAATATTATCGCGTGGGACGCACGCATGTACGGGTCTGGCGTTGCAGGCGTTCACAGGTCAAATTGGAGCC
idx 2 locidx 116
6 T
11 (6, 5, 5, 0)
[ 0 0 19 0]
30 A
35 (30, 5, 5, 0)
[ 0 19 0 0]
64 A
69 (64, 5, 5, 0)
[ 0 19 0 0]
84 C
89 (84, 5, 5, 0)
[19 0 0 0]
CACGCATTGCCGATCTGAATACAATAAACCACCTGTACTGTCGGTGAGGACGTCTGGTGGGTAAACCGCAAGGAAGGACAGCGCCT
idx 2 locidx 117
24 W
29 (24, 5, 5, 0)
[ 0 8 13 0]
76 T
81 (76, 5, 5, 0)
[ 0 0 21 0]
ATAGGGTCCAAGTGCTTGCTCGAAWCTCTGCGCTGGGTTAGATATTCTCATTGTGTTCAGGTACTGAGCTAGATTATATTGCGACG
idx 2 locidx 118
6 A
11 (6, 5, 5, 0)
[ 0 23 0 0]
15 T
20 (15, 5, 5, 0)
[ 0 0 23 0]
56 A
61 (56, 5, 5, 0)
[ 0 23 0 0]
CTAAAGAGTCCAAGATGCTTGGGGAGTCTTGGACTGGACGTCGCGAGGTTTTAGTGAGGGCATTCGTCCACACGATGCCACGTAGG
idx 2 locidx 119
1 T
6 (1, 5, 5, 0)
[ 0 0 27 0]
20 A
25 (20, 5, 5, 0)
[ 0 27 0 0]
22 A
27 (22, 5, 5, 0)
[ 0 27 0 0]
40 T
45 (40, 5, 5, 0)
[ 0 0 27 0]
69 G
74 (69, 5, 5, 0)
[ 0 0 0 27]
76 T
81 (76, 5, 5, 0)
[ 0 0 27 0]
GTTATCGATTAAACGTCGGAACAGCTACCGGCCCTAATAGTCCTTGTCTAAACTCCTGGCAGTCCTCCGGCTTGGCTCCTGCAGCT
idx 2 locidx 120
11 T
16 (11, 5, 5, 0)
[ 0 0 19 0]
22 T
27 (22, 5, 5, 0)
[ 0 0 19 0]
45 C
50 (45, 5, 5, 0)
[19 0 0 0]
47 C
52 (47, 5, 5, 0)
[19 0 0 0]
68 C
73 (68, 5, 5, 0)
[19 0 0 0]
GGAGTCCTCGCTTCGATCCTTATCTTGTTACAGCAAAGCAGCTTTCCCTCAGCTCAACCGGGAGATGCCACCATATTGTTATCAAA
idx 2 locidx 121
9 G
14 (9, 5, 5, 0)
[ 0 0 0 26]
33 G
38 (33, 5, 5, 0)
[ 0 0 0 26]
47 C
52 (47, 5, 5, 0)
[26 0 0 0]
GGGTTAGGCGTATCTGCCAAAGATTCTTCGATCGTGATGATTCTAGACGACAATACACCTGATGCTTCTCGCATGCATAGCAATGG
idx 2 locidx 122
9 A
14 (9, 5, 5, 0)
[ 0 21 0 0]
64 T
69 (64, 5, 5, 0)
[ 0 0 21 0]
66 G
71 (66, 5, 5, 0)
[ 0 0 0 21]
73 T
78 (73, 5, 5, 0)
[ 0 0 21 0]
78 T
83 (78, 5, 5, 0)
[ 0 0 21 0]
CTTAGTACCAGCACAGTGCCGCAACCTTTCGGCTTTGGGATAGGATACATATTTTTAGGATAGTTTGAGTATGTTGCGTCCTCTCT
idx 2 locidx 123
31 G
36 (31, 5, 5, 0)
[ 0 0 0 21]
62 G
67 (62, 5, 5, 0)
[ 0 0 0 21]
83 T
88 (83, 5, 5, 0)
[ 0 0 21 0]
84 C
89 (84, 5, 5, 0)
[21 0 0 0]
85 A
90 (85, 5, 5, 0)
[ 0 21 0 0]
AGAAAGACGATGGCCGCCCCAAGAGAGGCCTGAACGGCATGATTAGAGCGTGTAGGGCTGACGAACGTCTGGACGACACAGCATCA
idx 2 locidx 124
4 T
9 (4, 5, 5, 0)
[ 0 0 24 0]
15 A
20 (15, 5, 5, 0)
[ 0 24 0 0]
34 A
39 (34, 5, 5, 0)
[ 0 24 0 0]
43 C
48 (43, 5, 5, 0)
[24 0 0 0]
52 A
57 (52, 5, 5, 0)
[ 0 24 0 0]
57 T
62 (57, 5, 5, 0)
[ 0 0 24 0]
84 G
89 (84, 5, 5, 0)
[ 0 0 0 24]
TGGATCCGCCGTGGGACGGCATTACTAATGCAAAACCGTTGGTCAAGGTCTTAAGCTTCGTCCGTGCTCTTCAAATTTCTTAACGT
idx 2 locidx 125
3 T
8 (3, 5, 5, 0)
[ 0 0 23 0]
24 A
29 (24, 5, 5, 0)
[ 0 23 0 0]
73 T
78 (73, 5, 5, 0)
[ 0 0 23 0]
81 A
86 (81, 5, 5, 0)
[ 0 23 0 0]
CCGTTTCACCACGTGATACTCCAGAGTCTTCCATTGCACACATACTTGGCTCCAGTAGCTCACGTACCATACTTACACTTTAGCGT
idx 2 locidx 126
4 A
9 (4, 5, 5, 0)
[ 0 22 0 0]
31 C
36 (31, 5, 5, 0)
[22 0 0 0]
37 G
42 (37, 5, 5, 0)
[ 0 0 0 22]
48 A
53 (48, 5, 5, 0)
[ 0 22 0 0]
51 C
56 (51, 5, 5, 0)
[22 0 0 0]
67 G
72 (67, 5, 5, 0)
[ 0 0 0 22]
TAAAAATAAAGCAATTGCTGCCATCTATGGGCAGTTTGATGGTTTTTTATGCTCTACTATTAATTATGTGATCTTGCCCAGGAGGT--
idx 2 locidx 127
7 T
12 (7, 5, 5, 0)
[ 0 0 16 0]
9 A
14 (9, 5, 5, 0)
[ 0 16 0 0]
15 G
20 (15, 5, 5, 0)
[ 0 0 0 16]
36 G
41 (36, 5, 5, 0)
[ 0 0 0 16]
80 C
85 (80, 5, 5, 0)
[16 0 0 0]
84 T
89 (84, 5, 5, 0)
[ 0 0 16 0]
GAAGCCTTTAGAAGGGCCAAGGGGAGATCCATTCAGGGCTTGTTGCACGAAATCCATTAGCTCTCATTAATTCTATACCACTTATC
idx 2 locidx 128
22 G
27 (22, 5, 5, 0)
[ 0 0 0 21]
45 A
50 (45, 5, 5, 0)
[ 0 21 0 0]
77 T
82 (77, 5, 5, 0)
[ 0 0 21 0]
85 A
90 (85, 5, 5, 0)
[ 0 21 0 0]
CCGGTCAACTACTGTCTTACGGGGGGGGCATCCGTTCCTAGTCGCATTACGATATTCGTATGCCGGTACTTCCCTGGTGGATAGCA
idx 2 locidx 129
4 T
9 (4, 5, 5, 0)
[ 0 0 19 0]
20 G
25 (20, 5, 5, 0)
[ 0 0 0 19]
28 G
33 (28, 5, 5, 0)
[ 0 0 0 19]
38 C
43 (38, 5, 5, 0)
[19 0 0 0]
44 C
49 (44, 5, 5, 0)
[19 0 0 0]
45 A
50 (45, 5, 5, 0)
[ 0 19 0 0]
50 A
55 (50, 5, 5, 0)
[ 0 19 0 0]
57 A
62 (57, 5, 5, 0)
[ 0 19 0 0]
59 A
64 (59, 5, 5, 0)
[ 0 19 0 0]
60 G
65 (60, 5, 5, 0)
[ 0 0 1 18]
79 T
84 (79, 5, 5, 0)
[ 0 0 19 0]
83 C
88 (83, 5, 5, 0)
[19 0 0 0]
ATCCTCTCCGACAAGGTTCTGGTGCGTTGAATGGTAGGCGACCTCACAGCACCCACAACAGTACCGACAGCTGACCTAATCCGCCC
idx 2 locidx 130
1 G
6 (1, 5, 5, 0)
[ 0 0 0 21]
9 T
14 (9, 5, 5, 0)
[ 0 0 21 0]
12 A
17 (12, 5, 5, 0)
[ 0 21 0 0]
13 G
18 (13, 5, 5, 0)
[ 0 0 0 21]
47 A
52 (47, 5, 5, 0)
[ 0 21 0 0]
78 A
83 (78, 5, 5, 0)
[ 0 21 0 0]
CGTTAACCTTACAGACACATTCGGTTCGCGCAGTTAGATGTGAGACGAGGATCGTGGTACAACCAAGCTTATCACAGTACGGAGAG
idx 2 locidx 131
24 C
29 (24, 5, 5, 0)
[20 0 0 0]
27 T
32 (27, 5, 5, 0)
[ 0 0 20 0]
63 G
68 (63, 5, 5, 0)
[ 0 0 0 20]
AGGTTCAAGAGTTTGTGCACTATTCACTCAACCTAACGCAGAGATTACCCAGGGGCTACGCTAGCGATAAACCACCGCAATACCGG
idx 2 locidx 132
3 T
8 (3, 5, 5, 0)
[ 0 0 14 0]
24 T
29 (24, 5, 5, 0)
[ 0 0 14 0]
59 C
64 (59, 5, 5, 0)
[14 0 0 0]
68 C
73 (68, 5, 5, 0)
[14 0 0 0]
AAATTGCCACGGTGACAATTGAGGTTACGAGCCAGAGTACAGCCTTGTTATCTCAAAGTCCGGTGGTTCCCTACCCTGTATGGTCC
idx 2 locidx 133
79 A
84 (79, 5, 5, 0)
[ 0 19 0 0]
GCCGGCATGTAGGCTAGAGCATCGAGCTCTAGTGAATAACTAGCACCGCAGGGAAACCATGCGGGTATTGACAGCCCTAATGCACT
idx 2 locidx 134
20 T
25 (20, 5, 5, 0)
[ 0 0 22 0]
62 T
67 (62, 5, 5, 0)
[ 0 0 22 0]
71 C
76 (71, 5, 5, 0)
[22 0 0 0]
74 K
79 (74, 5, 5, 0)
[ 0 0 13 9]
75 T
80 (75, 5, 5, 0)
[ 0 0 22 0]
CGATCAATGCCGGTCCTAGTTAACGCAATTGCTGATGCTCTTCTGGCCTAGGGTCCAATCCATGACTAGCACGAKTGAAAGAGAGG
idx 2 locidx 135
83 G
88 (83, 5, 5, 0)
[ 0 0 0 19]
84 T
89 (84, 5, 5, 0)
[ 0 0 19 0]
TTACGAACGTTGACAGCCGCGCATGACAAACAAGGTATCCAGAAATCCCCTGTCATATGAGGCAGGCAAGCAATTTACTCGGGGTT
idx 2 locidx 136
20 A
25 (20, 5, 5, 0)
[ 0 20 0 0]
30 G
35 (30, 5, 5, 0)
[ 0 0 0 20]
47 A
52 (47, 5, 5, 0)
[ 0 20 0 0]
62 G
67 (62, 5, 5, 0)
[ 0 0 0 20]
78 C
83 (78, 5, 5, 0)
[20 0 0 0]
GTTTGCAGCGGGCCAATGACAGGCTAATACGTTGATGGTGGCGCTAAAAGTAGTCGAGCACTGGCGAACCTGTGAAGACCGCCGTC
idx 2 locidx 137
54 G
59 (54, 5, 5, 0)
[ 0 0 0 22]
73 G
78 (73, 5, 5, 0)
[ 0 0 0 22]
85 A
90 (85, 5, 5, 0)
[ 0 22 0 0]
CCCCACAGAGCCCATTTGGGATGCCAGTTGGCGGGGGTGCCCCGCCTCACCTCAGTCAGTTCTGTGAACGTAAGGGTCTGTCGAAA
idx 2 locidx 138
10 T
15 (10, 5, 5, 0)
[ 0 0 20 0]
77 C
82 (77, 5, 5, 0)
[20 0 0 0]
85 A
90 (85, 5, 5, 0)
[ 0 20 0 0]
GGTGCTGTGGTGTCTCACCATAGATGGTTTTCTTCGCAGATGTCATAGCTGGCCCTGCCACCCTTGAATCGTGATCGCTAGTGACA
idx 2 locidx 139
26 T
31 (26, 5, 5, 0)
[ 0 0 19 0]
29 A
34 (29, 5, 5, 0)
[ 0 19 0 0]
62 T
67 (62, 5, 5, 0)
[ 0 0 19 0]
77 M
82 (77, 5, 5, 0)
[ 9 10 0 0]
TCCCTACTATCCACCCTGCAGTGCAATTCAGTCTACGCTGCATTGCACAAATAGTATCGCAGTTGAAGTATAATAATMAGCCTACT
idx 2 locidx 140
50 T
55 (50, 5, 5, 0)
[ 0 0 21 0]
80 A
85 (80, 5, 5, 0)
[ 0 21 0 0]
CACAACGTTGACACTCTCGCGCCAACCCGTCCCGGCAAGAGGCGGCAATCTAATGTGTCACGAAAGTGCGTGGGAAAGACAAGACG
idx 2 locidx 141
15 G
20 (15, 5, 5, 0)
[ 0 0 0 24]
25 M
30 (25, 5, 5, 0)
[13 11 0 0]
38 T
43 (38, 5, 5, 0)
[ 0 0 24 0]
40 G
45 (40, 5, 5, 0)
[ 0 0 0 24]
52 G
57 (52, 5, 5, 0)
[ 0 0 0 24]
CGGATTGCCGAAAAAGGAGAAAAAGMTCCACCGATATGTGGCTCTTACAGGAGTCTGTAGGCGAGTCGCTTGTCTGCCGTTTATCC
idx 2 locidx 142
66 G
71 (66, 5, 5, 0)
[ 0 0 0 18]
81 G
86 (81, 5, 5, 0)
[ 0 0 0 18]
CCGTGACCTACGTGTTTTAACGGTGAGACCGGTGACATAATTAAGATGCATAATGCAGGGGAGTGAGGCGGGTACGGAGTCGATGT
idx 2 locidx 143
0 A
5 (0, 5, 5, 0)
[ 0 21 0 0]
20 G
25 (20, 5, 5, 0)
[ 0 0 0 21]
28 G
33 (28, 5, 5, 0)
[ 0 0 0 21]
48 A
53 (48, 5, 5, 0)
[ 0 21 0 0]
57 G
62 (57, 5, 5, 0)
[ 0 0 0 21]
60 G
65 (60, 5, 5, 0)
[ 1 0 0 20]
72 G
77 (72, 5, 5, 0)
[ 0 0 0 21]
AGCTATTCGCCTTTGCATCGGATCTCGAGCTCGCGGACCGAAATGACAAAGTCGCACGCGGCTGATCTACTTGTTCTTTGAAGTAT
idx 2 locidx 144
14 C
19 (14, 5, 5, 0)
[19 0 0 0]
57 G
62 (57, 5, 5, 0)
[ 0 0 0 19]
62 G
67 (62, 5, 5, 0)
[ 0 0 0 19]
69 K
74 (69, 5, 5, 0)
[ 0 0 10 9]
85 G
90 (85, 5, 5, 0)
[ 0 0 0 19]
GGCAGCACCGCTTGCGTGCGCGAATGCAGGGCGTGTCAATGCGGCAGAACATCTCTGGGAGGGCCCTCGKACCGGATCGTCGACAG
idx 2 locidx 145
1 A
6 (1, 5, 5, 0)
[ 0 21 0 0]
21 A
26 (21, 5, 5, 0)
[ 0 21 0 0]
26 C
31 (26, 5, 5, 0)
[21 0 0 0]
30 C
35 (30, 5, 5, 0)
[21 0 0 0]
45 G
50 (45, 5, 5, 0)
[ 0 0 0 21]
57 T
62 (57, 5, 5, 0)
[ 0 0 21 0]
CATGTCTACATGAGAATTGGCAGCTTCATACTATGACGTGGGGTTGCAGGTGAAGAGTAAAATAGACGATGTAAGTGTACTGCCAA
idx 2 locidx 146
22 A
27 (22, 5, 5, 0)
[ 0 22 0 0]
31 C
36 (31, 5, 5, 0)
[22 0 0 0]
33 A
38 (33, 5, 5, 0)
[ 0 22 0 0]
46 C
51 (46, 5, 5, 0)
[22 0 0 0]
65 T
70 (65, 5, 5, 0)
[ 0 0 22 0]
TCGCATGAAGATCTGGTTCCTAACTAGACTTCGACTAGTACGCTCACGTCGTCTCAACGGCTCGCTAACAAGATACGAGGTGTCTT
idx 2 locidx 147
6 T
11 (6, 5, 5, 0)
[ 0 0 18 0]
11 G
16 (11, 5, 5, 0)
[ 0 0 0 18]
28 T
33 (28, 5, 5, 0)
[ 0 0 18 0]
73 C
78 (73, 5, 5, 0)
[18 0 0 0]
82 C
87 (82, 5, 5, 0)
[18 0 0 0]
83 T
88 (83, 5, 5, 0)
[ 0 0 18 0]
84 A
89 (84, 5, 5, 0)
[ 0 18 0 0]
GGTGGCTCAGTGGTATGTATCTCTGTATTAAAAACGCTGGTATTGAAAATACCAACCATCGATGGGATGCCACCTGTCGATTCTAA
idx 2 locidx 148
7 G
12 (7, 5, 5, 0)
[ 0 0 0 18]
19 C
24 (19, 5, 5, 0)
[18 0 0 0]
53 C
58 (53, 5, 5, 0)
[18 0 0 0]
60 C
65 (60, 5, 5, 0)
[18 0 0 0]
83 G
88 (83, 5, 5, 0)
[ 0 0 0 18]
GAAGCCCGATTCCTAACAGCGGATCTTGTAGGACTTCCACCGGCAAGCGTGTCCAGGCGCCGACGTAGGGAGAGTGTAGCTTCGAG
idx 2 locidx 149
18 G
23 (18, 5, 5, 0)
[ 0 0 0 19]
49 A
54 (49, 5, 5, 0)
[ 0 19 0 0]
59 T
64 (59, 5, 5, 0)
[ 0 0 19 0]
TAGGTTAGGCCACCGTCGGACATTGTGTATGGTAGACATGCCGCCGCTTAATAGGAAATTGCACAGAAAGGTCTTAGACGGTTGAT
idx 3 locidx 150
4 C
9 (4, 5, 5, 0)
[19 0 1 0]
7 T
12 (7, 5, 5, 0)
[ 0 0 20 0]
10 A
15 (10, 5, 5, 0)
[ 0 20 0 0]
11 T
16 (11, 5, 5, 0)
[ 0 0 20 0]
14 C
19 (14, 5, 5, 0)
[20 0 0 0]
15 G
20 (15, 5, 5, 0)
[ 0 0 0 20]
17 C
22 (17, 5, 5, 0)
[20 0 0 0]
18 C
23 (18, 5, 5, 0)
[20 0 0 0]
61 C
66 (61, 5, 5, 0)
[20 0 0 0]
AGCGCACTATATTCCGGCCGAAGCCCACGCGGAACTGTAAGCGTAGTGTTGCTTCTGCGAGCGCGAATTGGGATATCGGCTGCACA
idx 3 locidx 151
11 T
16 (11, 5, 5, 0)
[ 0 0 16 0]
12 T
17 (12, 5, 5, 0)
[ 0 0 16 0]
27 T
32 (27, 5, 5, 0)
[ 0 0 16 0]
48 C
53 (48, 5, 5, 0)
[16 0 0 0]
69 G
74 (69, 5, 5, 0)
[ 0 0 0 16]
74 A
79 (74, 5, 5, 0)
[ 0 16 0 0]
AACGTCTCCTTTTTCTCTCGGTGGCGATACACGTATCAAGCGCTGAAGCACCGTCGCTATGCAGCTAGTGGCAAAGGCGATGCTCC
idx 3 locidx 152
19 C
24 (19, 5, 5, 0)
[21 0 0 0]
29 A
34 (29, 5, 5, 0)
[ 0 21 0 0]
55 A
60 (55, 5, 5, 0)
[ 0 21 0 0]
71 A
76 (71, 5, 5, 0)
[ 0 21 0 0]
ATGACCTAAGAGAACGGCGCCGTTACTGCAATAATTCCGCAGGATCCTTTTGGACAAAAAACGAAACAGAGACTGAGCTTCCATTG
idx 3 locidx 153
17 T
22 (17, 5, 5, 0)
[ 0 0 20 0]
20 C
25 (20, 5, 5, 0)
[20 0 0 0]
78 G
83 (78, 5, 5, 0)
[ 0 0 0 20]
TCGCCAATGTATTGAACTACCTCTTGCATATTTTTAATTCCTCAGTCCTTCGTTGTTGGATCCGCAAAGACAGTTCGTGGTTCCGC
idx 3 locidx 154
40 A
45 (40, 5, 5, 0)
[ 0 17 0 0]
46 C
51 (46, 5, 5, 0)
[17 0 0 0]
47 A
52 (47, 5, 5, 0)
[ 0 17 0 0]
48 C
53 (48, 5, 5, 0)
[17 0 0 0]
GTCCAAGATAGTACGCATTACGGAAATAATCTAGCTACATACGCGCCACGGGTTAAGCAAGGAATTAACGGCTCTATCAGAAGATG
idx 3 locidx 155
15 T
20 (15, 5, 5, 0)
[ 0 0 22 0]
35 T
40 (35, 5, 5, 0)
[ 0 0 22 0]
84 C
89 (84, 5, 5, 0)
[22 0 0 0]
TTTAACTGTTCAAGTTGGCAAGATCAAGTCGTCCCTAGCCCCCGCGTCCGTTTTTACCTGGTCGCGGTCCCGACCCAGCTGCCCCC
idx 3 locidx 156
36 A
41 (36, 5, 5, 0)
[ 0 23 0 0]
41 G
46 (41, 5, 5, 0)
[ 0 0 0 23]
43 C
48 (43, 5, 5, 0)
[23 0 0 0]
73 A
78 (73, 5, 5, 0)
[ 0 23 0 0]
TGCACTGCGAGGGCTAGGGGACTGCAACAAGCCGAAAGGGTGACGTGCCTCTCCGTCGGGTGCGCTGTGTCGAACCATCCCTTGTT
idx 3 locidx 157
5 T
10 (5, 5, 5, 0)
[ 0 0 20 0]
10 A
15 (10, 5, 5, 0)
[ 0 20 0 0]
46 T
51 (46, 5, 5, 0)
[ 0 0 20 0]
80 T
85 (80, 5, 5, 0)
[ 0 0 20 0]
82 C
87 (82, 5, 5, 0)
[20 0 0 0]
CCCAGTCAGTATGCCTATCGGGCATTCGGGCCCGCGTGCACTCCACTGACGCCGATAGTGCTACAGGCGCCGCTATTGAATCCCGG
idx 3 locidx 158
22 A
27 (22, 5, 5, 0)
[ 0 21 0 0]
33 G
38 (33, 5, 5, 0)
[ 0 0 0 21]
35 G
40 (35, 5, 5, 0)
[ 0 0 0 21]
36 T
41 (36, 5, 5, 0)
[ 0 0 21 0]
79 C
84 (79, 5, 5, 0)
[21 0 0 0]
TAAAGATTCACTTCCACGAGTCATGTTACTAAAGCGTTAAAGCGTAAAGCTTATATCTCTCTTGCATTTGGTATTACATCCTGCGA
idx 3 locidx 159
14 T
19 (14, 5, 5, 0)
[ 0 0 17 0]
51 S
56 (51, 5, 5, 0)
[9 0 0 8]
63 A
68 (63, 5, 5, 0)
[ 0 17 0 0]
75 A
80 (75, 5, 5, 0)
[ 0 17 0 0]
CGACCCGCCTCCTGTGAATCGCATGGCTGGGGCTGAACGTACGTAGTAACTSGGGAGTGGACCAAGTACTAGGGTATAGTTCTATT
idx 3 locidx 160
9 G
14 (9, 5, 5, 0)
[ 0 0 0 26]
14 C
19 (14, 5, 5, 0)
[26 0 0 0]
85 G
90 (85, 5, 5, 0)
[ 0 0 0 26]
ATCGGATACGATGGCTATAGCAATTGACATCCGCCTCCTAGTTTGTAATATTGTTCACGAGGGTGTACATGGCTAGGCAGAAATCG
NOT HERE
idx 3 locidx 162
1 G
6 (1, 5, 5, 0)
[ 0 0 0 20]
12 A
17 (12, 5, 5, 0)
[ 0 20 0 0]
21 A
26 (21, 5, 5, 0)
[ 0 20 0 0]
71 C
76 (71, 5, 5, 0)
[20 0 0 0]
76 A
81 (76, 5, 5, 0)
[ 0 20 0 0]
77 C
82 (77, 5, 5, 0)
[20 0 0 0]
83 C
88 (83, 5, 5, 0)
[20 0 0 0]
85 T
90 (85, 5, 5, 0)
[ 0 0 20 0]
AGGAATGGATAAACGCTCTTCAGGCTGAATTCTGCTACTTATTAGATGGTGGATCACACGTGATCCTTAATCTTAAACCGACACCT
idx 3 locidx 163
30 A
35 (30, 5, 5, 0)
[ 0 16 0 0]
52 T
57 (52, 5, 5, 0)
[ 0 0 16 0]
73 G
78 (73, 5, 5, 0)
[ 0 0 0 16]
CTCGAGTTGCTATCGGCCAACGATTGGCAAAGCTCCTGAGATATATAACTAGTTCGTTGTCTTCGCGGGATAAGGTCGTGCTGGAG
idx 3 locidx 164
77 A
82 (77, 5, 5, 0)
[ 0 23 0 0]
82 T
87 (82, 5, 5, 0)
[ 0 0 23 0]
83 A
88 (83, 5, 5, 0)
[ 0 23 0 0]
GCGTGGGCCAGGGAAGCTCTCGCGAATTATTCGCTCGTTTGGGGGGACTGATACATGTGAAGGCGTGCGACCTAGTGATTTATATG
idx 3 locidx 165
3 T
8 (3, 5, 5, 0)
[ 0 0 16 0]
9 A
14 (9, 5, 5, 0)
[ 0 16 0 0]
28 C
33 (28, 5, 5, 0)
[16 0 0 0]
31 W
36 (31, 5, 5, 0)
[0 7 9 0]
37 T
42 (37, 5, 5, 0)
[ 0 0 16 0]
55 C
60 (55, 5, 5, 0)
[16 0 0 0]
AACTAAGACAGATCCGAATAACGCCTCTCAAWTAACCTCCTTGTGTCACGCGTGGCTCATGCGATTACGCGATATCCTTGGCGCAT
idx 3 locidx 166
0 G
5 (0, 5, 5, 0)
[ 0 0 0 16]
50 A
55 (50, 5, 5, 0)
[ 0 16 0 0]
63 A
68 (63, 5, 5, 0)
[ 0 16 0 0]
72 T
77 (72, 5, 5, 0)
[ 0 0 16 0]
73 A
78 (73, 5, 5, 0)
[ 0 16 0 0]
79 A
84 (79, 5, 5, 0)
[ 0 16 0 0]
83 T
88 (83, 5, 5, 0)
[ 0 0 16 0]
GGGCGGGACCGCCCCAGACTATCTTCGGAAACGGTCGCTAGAACACCCTCAGACCATGTGAATACTTGTCGATAGGCCGACGCTAA
idx 3 locidx 167
6 A
11 (6, 5, 5, 0)
[ 0 21 0 0]
21 C
26 (21, 5, 5, 0)
[21 0 0 0]
28 T
33 (28, 5, 5, 0)
[ 0 0 21 0]
33 G
38 (33, 5, 5, 0)
[ 0 0 0 21]
39 C
44 (39, 5, 5, 0)
[21 0 0 0]
44 A
49 (44, 5, 5, 0)
[ 0 21 0 0]
82 G
87 (82, 5, 5, 0)
[ 0 0 0 21]
84 C
89 (84, 5, 5, 0)
[21 0 0 0]
TCCTTAAGGATCGTACGAATGCATGGCGTTGCTGATGCCCATCGATGGTCCATTACCACCTGATGGCGCATAAACGGAGCTCGCCA
idx 3 locidx 168
0 A
5 (0, 5, 5, 0)
[ 0 19 0 0]
34 A
39 (34, 5, 5, 0)
[ 0 19 0 0]
54 C
59 (54, 5, 5, 0)
[19 0 0 0]
62 T
67 (62, 5, 5, 0)
[ 0 0 19 0]
66 C
71 (66, 5, 5, 0)
[19 0 0 0]
81 G
86 (81, 5, 5, 0)
[ 0 0 0 19]
AATTGCGCCTTTGTCTCGGTCGAACCTGTCCACCATATCACACCTGCCTCACGCCAAGTGAATTTACATGATTCTTTCCGAGGCCT
idx 3 locidx 169
0 C
5 (0, 5, 5, 0)
[17 0 0 0]
14 T
19 (14, 5, 5, 0)
[ 0 0 17 0]
20 G
25 (20, 5, 5, 0)
[ 0 0 0 17]
26 A
31 (26, 5, 5, 0)
[ 0 17 0 0]
41 A
46 (41, 5, 5, 0)
[ 0 17 0 0]
42 C
47 (42, 5, 5, 0)
[17 0 0 0]
69 A
74 (69, 5, 5, 0)
[ 0 17 0 0]
CATGAAGTCTGAACTCCTTTGCGAGGAAGCCCTTTGTTGTGACCAGGATTAGTATGCTTGTGCCTGGGCACGACTTAACTGAGAGT
idx 3 locidx 170
4 T
9 (4, 5, 5, 0)
[ 0 0 21 0]
24 T
29 (24, 5, 5, 0)
[ 0 0 21 0]
42 G
47 (42, 5, 5, 0)
[ 0 0 0 21]
45 A
50 (45, 5, 5, 0)
[ 0 21 0 0]
54 A
59 (54, 5, 5, 0)
[ 0 21 0 0]
71 G
76 (71, 5, 5, 0)
[ 0 0 0 21]
73 A
78 (73, 5, 5, 0)
[ 0 21 0 0]
77 G
82 (77, 5, 5, 0)
[ 0 0 0 21]
83 G
88 (83, 5, 5, 0)
[ 0 0 0 21]
CTCGTTGTAAACCTGCGTCCGTTATGCGGCCAACTTTCGCACGCTAGGGTAGTTAAAGGTAATCCATCCCCGGACTCGTGGGAGAT
idx 3 locidx 171
28 G
33 (28, 5, 5, 0)
[ 0 0 1 18]
36 G
41 (36, 5, 5, 0)
[ 0 0 0 19]
42 A
47 (42, 5, 5, 0)
[ 0 19 0 0]
79 C
84 (79, 5, 5, 0)
[19 0 0 0]
AGCCCCCGTGTTAGACAGTTGAATATTTGGTCCTGGGTTACCAGTGCATGTTGTAAGAGACTCGTGTACGCAAGGAGAACCTTCAA
idx 3 locidx 172
38 A
43 (38, 5, 5, 0)
[ 0 19 0 0]
41 C
46 (41, 5, 5, 0)
[19 0 0 0]
43 G
48 (43, 5, 5, 0)
[ 0 0 0 19]
77 W
82 (77, 5, 5, 0)
[ 0 9 10 0]
ACAATCTCAGTATGCAAATGTGAAAGGCACGATGCGATAAGCCGCACCGGTAACCAATCGTGAGCGTTGGCACTACGWACCAGGAA---
idx 3 locidx 173
40 G
45 (40, 5, 5, 0)
[ 0 0 0 20]
55 T
60 (55, 5, 5, 0)
[ 0 0 20 0]
69 C
74 (69, 5, 5, 0)
[20 0 0 0]
CTAAGGCAAAATACAGTCACAAGTCTTAGACAGAGGAAGTGTGGGGACATGCTTCTTACAGTCGCGCGACTCATTTGGGAAGTACT
idx 3 locidx 174
14 C
19 (14, 5, 5, 0)
[18 0 0 0]
49 C
54 (49, 5, 5, 0)
[18 0 0 0]
56 C
61 (56, 5, 5, 0)
[18 0 0 0]
AACAAAATGATAAACCGATCATTTTTGTAGTCCTGTGCGTCGAGCCATTCTTCCACCCGTCTACTACGGTCGATTACTCAGCCGTA
idx 3 locidx 175
17 G
22 (17, 5, 5, 0)
[ 0 0 0 18]
32 G
37 (32, 5, 5, 0)
[ 0 0 0 18]
37 G
42 (37, 5, 5, 0)
[ 0 0 0 18]
56 C
61 (56, 5, 5, 0)
[18 0 0 0]
61 C
66 (61, 5, 5, 0)
[18 0 0 0]
83 T
88 (83, 5, 5, 0)
[ 0 0 18 0]
GCGGCTTCCATTGGCTTGATCTCTAACAGCAGGGACTGGTTTCGCCGGAACGGTGCCAACGCTACGAGATGGGGTAGATGACTTCG
idx 3 locidx 176
6 C
11 (6, 5, 5, 0)
[16 0 0 0]
23 A
28 (23, 5, 5, 0)
[ 0 16 0 0]
28 T
33 (28, 5, 5, 0)
[ 0 0 16 0]
30 R
35 (30, 5, 5, 0)
[0 9 0 7]
51 C
56 (51, 5, 5, 0)
[16 0 0 0]
GTATAGCTTTTTTTGTTGGCCGTAGTGATCRATGATAATAGCCTCATCTCACGATTCGAGGGTAAGTCAACTTCCGACGAATGCAT
idx 3 locidx 177
11 G
16 (11, 5, 5, 0)
[ 0 0 0 23]
19 A
24 (19, 5, 5, 0)
[ 0 23 0 0]
35 C
40 (35, 5, 5, 0)
[23 0 0 0]
55 G
60 (55, 5, 5, 0)
[ 0 0 0 23]
73 A
78 (73, 5, 5, 0)
[ 0 23 0 0]
83 A
88 (83, 5, 5, 0)
[ 0 23 0 0]
TCGGATAGAGAGTTCAATTATTGCAATATCCGAATCGACGTGTAGACGAGAGGTGGTATAAAGTCGATGGCAAACGCCACGAGATC
idx 3 locidx 178
0 T
5 (0, 5, 5, 0)
[ 0 0 20 0]
4 C
9 (4, 5, 5, 0)
[20 0 0 0]
16 A
21 (16, 5, 5, 0)
[ 0 20 0 0]
31 G
36 (31, 5, 5, 0)
[ 0 0 0 20]
32 C
37 (32, 5, 5, 0)
[20 0 0 0]
71 C
76 (71, 5, 5, 0)
[20 0 0 0]
TCTACATTGTAATTGGATCCCCCTGGCCGCGGCGGAAATGTTGGGACGTTTCTAGGTTAGCACTAGTAACCCTTGTATAATACTGG
idx 3 locidx 179
51 T
56 (51, 5, 5, 0)
[ 0 0 13 0]
53 G
58 (53, 5, 5, 0)
[ 0 0 0 13]
82 C
87 (82, 5, 5, 0)
[13 0 0 0]
TAACATAGCCAAATTAAGATATTAGTTCGACGCCCCGGCCCTGGACGGCTTTGGCCCAGTTGATAGCTCGGGCATCCCAAGTCGGC
idx 3 locidx 180
9 C
14 (9, 5, 5, 0)
[18 1 0 0]
20 T
25 (20, 5, 5, 0)
[ 0 0 19 0]
40 A
45 (40, 5, 5, 0)
[ 0 19 0 0]
43 C
48 (43, 5, 5, 0)
[19 0 0 0]
49 T
54 (49, 5, 5, 0)
[ 0 0 19 0]
TTATAAGACCCTACGCGAATTGGGGCAAATGCGGACGTGTATGCGGGCTTTGTTATGCATAATTGAATTCCACGTCTGGTTTGAAG
idx 3 locidx 181
11 G
16 (11, 5, 5, 0)
[ 0 0 0 20]
13 G
18 (13, 5, 5, 0)
[ 0 0 0 20]
18 T
23 (18, 5, 5, 0)
[ 0 0 20 0]
19 G
24 (19, 5, 5, 0)
[ 0 0 0 20]
37 G
42 (37, 5, 5, 0)
[ 0 0 0 20]
56 C
61 (56, 5, 5, 0)
[20 0 0 0]
81 A
86 (81, 5, 5, 0)
[ 0 20 0 0]
CGCTACTTCCGGGGTGCGTGGTCTACACACTTAGGCAGACTAGGGCGAACTCCTTACTAAGCTGTACCCTCAGGTAGCCTTAAATC
idx 3 locidx 182
0 A
5 (0, 5, 5, 0)
[ 0 18 0 0]
12 C
17 (12, 5, 5, 0)
[18 0 0 0]
31 C
36 (31, 5, 5, 0)
[18 0 0 0]
39 A
44 (39, 5, 5, 0)
[ 0 18 0 0]
40 G
45 (40, 5, 5, 0)
[ 0 0 0 18]
46 T
51 (46, 5, 5, 0)
[ 0 0 18 0]
66 C
71 (66, 5, 5, 0)
[18 0 0 0]
69 A
74 (69, 5, 5, 0)
[ 0 18 0 0]
AGTGGAGGGAGACGTAGACGTGTAGTGGCACCACTGCTGAGCAGTATTCCACCCGTTGTTGGTGTCCGTACTGTCTTGTTTGCCCA
idx 3 locidx 183
29 C
34 (29, 5, 5, 0)
[20 0 0 0]
56 C
61 (56, 5, 5, 0)
[20 0 0 0]
83 G
88 (83, 5, 5, 0)
[ 0 0 0 20]
ATTAAAGTTCCATCTGCACCAGTAGGAAGCTCTCTAACGAGAAGTTTAGAAATAGGCCGGGTGCGCCCGGAAGCGATCGGAGAGGT
idx 3 locidx 184
15 T
20 (15, 5, 5, 0)
[ 0 0 19 0]
82 A
87 (82, 5, 5, 0)
[ 0 19 0 0]
TGTGTCCGATAGCCTTAGTCTTCTAACGAGAAGCCGAACTATACCCGCAACAGTGCTGATCTCTAGGCTAAACCGTACCATGAAAC-
idx 3 locidx 185
16 R
21 (16, 5, 5, 0)
[ 0 14 0 9]
23 G
28 (23, 5, 5, 0)
[ 0 0 0 23]
24 C
29 (24, 5, 5, 0)
[23 0 0 0]
GTTCGACTCTATAGGCRCTAGCGGCACGTCGCGCGTTATAAATCCACGTTAGAAGCTCTCATCCGTACAAATAGTGTTGCCTAAAA
idx 3 locidx 186
52 T
57 (52, 5, 5, 0)
[ 0 0 17 0]
65 R
70 (65, 5, 5, 0)
[0 8 0 9]
82 T
87 (82, 5, 5, 0)
[ 0 0 17 0]
GGAAATCTCGTCTACCTCCGTTCCTATTCTTACTAGGGGGACCTGGACCAGCTTTGTAAGCAAAARGTCTTTGGCTTAGAAGTTTG
idx 3 locidx 187
30 A
35 (30, 5, 5, 0)
[ 0 24 0 0]
32 A
37 (32, 5, 5, 0)
[ 0 24 0 0]
61 G
66 (61, 5, 5, 0)
[ 0 0 0 24]
CAACGGATCTGTAAAAGTGGGCAAAAATCGATAGAACGGTGCAATTAAGTACCGTCAATGGGACCTGAGGCTTCTAACAGCCCGGT-
idx 3 locidx 188
20 G
25 (20, 5, 5, 0)
[ 0 0 0 19]
35 G
40 (35, 5, 5, 0)
[ 0 0 0 19]
53 T
58 (53, 5, 5, 0)
[ 0 0 19 0]
CTGAGCTGCTTCTGAGCTTGGTCCTGATCCTCCCCGTTCGTCGACTGCCCAGCTCAAGATGGAGATTCAGCTGCCGTGATCACCGT
idx 3 locidx 189
6 A
11 (6, 5, 5, 0)
[ 0 24 0 0]
24 A
29 (24, 5, 5, 0)
[ 0 24 0 0]
37 C
42 (37, 5, 5, 0)
[24 0 0 0]
45 C
50 (45, 5, 5, 0)
[24 0 0 0]
46 G
51 (46, 5, 5, 0)
[ 0 0 0 24]
AATGTGAGATAAAGCCCATCATAGACCCGGAAGGAAGCCGAGGGGCGATAGGCTCCGTCCCCCAGTCCACAGCTACCGCAGAGCTC
idx 3 locidx 190
4 A
9 (4, 5, 5, 0)
[ 0 20 0 0]
45 G
50 (45, 5, 5, 0)
[ 0 0 0 20]
54 G
59 (54, 5, 5, 0)
[ 0 0 0 20]
80 A
85 (80, 5, 5, 0)
[ 0 20 0 0]
ATTAATGGCCCCGTCGTCCCCGCGAAATCTAAGCTGCATGGTGAGGCGGCTCGTGAACGCGCAGTATTTTCTTGTACTCAACTTGA
idx 3 locidx 191
1 A
6 (1, 5, 5, 0)
[ 0 20 0 0]
13 C
18 (13, 5, 5, 0)
[20 0 0 0]
15 G
20 (15, 5, 5, 0)
[ 0 0 0 20]
77 C
82 (77, 5, 5, 0)
[20 0 0 0]
AAAACGGCTAGACCGGTAGGGATATAAAATCATAACATAGCTTGGTTGGGCTTACGCACGTGCGACGCTTACGCCGTCAAGAATCT
idx 3 locidx 192
2 C
7 (2, 5, 5, 0)
[18 0 0 0]
7 A
12 (7, 5, 5, 0)
[ 0 18 0 0]
83 T
88 (83, 5, 5, 0)
[ 0 0 18 0]
TTCAACTACACCAGTCGCTGCCTCCATAAAGGGATCATCATACAGCACCGGTAAAGTAAATTGCGTCGCGATTCTATGCTACATTT
idx 3 locidx 193
14 C
19 (14, 5, 5, 0)
[20 0 0 0]
GTGACAGTCCGTGACAAGGGTCGGCATAGCCGATGCTACTACGTAATTCACTGCGGCGGTAAATAATATATGTACTTACCCTGAGG
idx 3 locidx 194
6 C
11 (6, 5, 5, 0)
[17 0 0 0]
19 T
24 (19, 5, 5, 0)
[ 0 0 17 0]
49 G
54 (49, 5, 5, 0)
[ 0 0 0 17]
69 T
74 (69, 5, 5, 0)
[ 0 0 17 0]
CAATGGCGGTGCAACAACGTGAAGAATTCCGAGTCTTACATGACCTTACGTGGAAACGCAGTAACTTTGTATAGGACGCGGCCAAT
idx 3 locidx 195
7 T
12 (7, 5, 5, 0)
[ 0 0 18 0]
33 T
38 (33, 5, 5, 0)
[ 0 0 18 0]
AAATTTGTTCACCGGTCCCTGGTTTATTTAGCGTCGAGGAACATTGCTATGACTCGCACTTTATTCACTTGCGGTATGCATCCAAG
idx 3 locidx 196
7 A
12 (7, 5, 5, 0)
[ 0 19 0 0]
10 G
15 (10, 5, 5, 0)
[ 0 0 0 19]
14 T
19 (14, 5, 5, 0)
[ 0 0 19 0]
39 G
44 (39, 5, 5, 0)
[ 0 0 0 19]
50 T
55 (50, 5, 5, 0)
[ 0 0 19 0]
52 A
57 (52, 5, 5, 0)
[ 0 19 0 0]
56 C
61 (56, 5, 5, 0)
[19 0 0 0]
58 S
63 (58, 5, 5, 0)
[10 0 0 9]
61 G
66 (61, 5, 5, 0)
[ 0 0 0 19]
64 T
69 (64, 5, 5, 0)
[ 0 0 19 0]
65 T
70 (65, 5, 5, 0)
[ 0 0 19 0]
77 G
82 (77, 5, 5, 0)
[ 0 0 0 19]
79 G
84 (79, 5, 5, 0)
[ 0 0 0 19]
CTCCGTCAAGGGAATATTTCTCCAACCGATCCCATGTGGGAATTAGGTCCTAAGGTCCSAAGTTTTCGAGATAAGCCGGGAGCTCT
idx 3 locidx 197
1 M
6 (1, 5, 5, 0)
[12 10 0 0]
31 W
36 (31, 5, 5, 0)
[ 0 12 10 0]
44 A
49 (44, 5, 5, 0)
[ 0 22 0 0]
51 G
56 (51, 5, 5, 0)
[ 0 0 0 22]
56 C
61 (56, 5, 5, 0)
[22 0 0 0]
AMATAGGAGTGACGTAGTTGACCTCGATCGGWCCGTCGAGGCAAATGTCACGCCGTCTCCACTTCTGGTGTAGCCCCCAGTGGAGT
idx 3 locidx 198
20 C
25 (20, 5, 5, 0)
[24 0 1 0]
25 A
30 (25, 5, 5, 0)
[ 0 25 0 0]
35 C
40 (35, 5, 5, 0)
[25 0 0 0]
CTAGTTGAGCAGTTAGTGCACGGATAAGGCGTGGTCTCCGGTTGTCTTCTTAGGTGGAGGAGTCCTCGTAGTCTGTGGGTGCAATT
idx 3 locidx 199
34 K
39 (34, 5, 5, 0)
[0 0 5 8]
56 G
61 (56, 5, 5, 0)
[ 0 0 0 13]
58 A
63 (58, 5, 5, 0)
[ 0 13 0 0]
GGCTACAGGGGTCGTCGGACCAATTTACTCAATTKTGCCGGGAAACCTGCTTTTGCGTAGACCTTCTTAGGGAGGGTATCAGATCA
idx 4 locidx 200
20 C
25 (20, 5, 5, 0)
[18 0 0 0]
21 T
26 (21, 5, 5, 0)
[ 0 0 18 0]
52 C
57 (52, 5, 5, 0)
[18 0 0 0]
72 A
77 (72, 5, 5, 0)
[ 0 18 0 0]
AGTTGCCCCTCGAAATCGTTCTTGTTGCAGTCACTAACTGCAGGTGGACGTGCGACAACTTCGGAGGTAACCATGTTACCCAATCG
idx 4 locidx 201
20 G
25 (20, 5, 5, 0)
[ 0 0 0 18]
28 G
33 (28, 5, 5, 0)
[ 0 0 0 18]
67 A
72 (67, 5, 5, 0)
[ 0 18 0 0]
AGACCTAACGTAGGTCCCAGGGTTAACGGGTGGACACCCATCTATATTAAGATGTAACCGGGCCAGTACTTCAGGCCGATGGCTTC
idx 4 locidx 202
65 G
70 (65, 5, 5, 0)
[ 0 0 0 25]
TCTCTCCAATACGTTGCCGAGTCGGGATTTAGACCATGGCTAACTTCGTGCAGAGTTGTAGTGGGGGTCGGGCCACCCAGAAATTT
idx 4 locidx 203
15 A
20 (15, 5, 5, 0)
[ 0 22 0 0]
44 G
49 (44, 5, 5, 0)
[ 0 0 0 22]
68 T
73 (68, 5, 5, 0)
[ 0 0 22 0]
74 C
79 (74, 5, 5, 0)
[22 0 0 0]
CGACTCAGAGCTCATAGTGGACCCATGACGTAGACCAGTGGCGTGCGTTTAGTAGTGGTGTTGAACAGTAGCTCCCTGACGATCCT
NOT HERE
idx 4 locidx 205
1 T
6 (1, 5, 5, 0)
[ 0 0 18 0]
35 A
40 (35, 5, 5, 0)
[ 0 18 0 0]
38 C
43 (38, 5, 5, 0)
[18 0 0 0]
GTCGAGCAGGACCAAAGTATGCCCATCAAGGTAACACGCGCTCTCGCTTTATTTTGCCGCCGCCGGATGCAATGACCGTAAAACCG
idx 4 locidx 206
2 G
7 (2, 5, 5, 0)
[ 0 0 0 22]
3 T
8 (3, 5, 5, 0)
[ 0 0 22 0]
12 C
17 (12, 5, 5, 0)
[22 0 0 0]
13 T
18 (13, 5, 5, 0)
[ 0 0 22 0]
15 C
20 (15, 5, 5, 0)
[22 0 0 0]
18 T
23 (18, 5, 5, 0)
[ 0 0 22 0]
53 A
58 (53, 5, 5, 0)
[ 0 22 0 0]
78 T
83 (78, 5, 5, 0)
[ 0 0 22 0]
GAGTAACAGACCCTACTCTACTCTGATCGCCGATGTCGATGAGGCTTGATCATAGGCAAACTAAGGCTCAGTCGTTGCTACTGTCG
idx 4 locidx 207
39 S
44 (39, 5, 5, 0)
[ 9 0 0 10]
42 G
47 (42, 5, 5, 0)
[ 0 0 0 19]
65 G
70 (65, 5, 5, 0)
[ 0 0 0 19]
70 C
75 (70, 5, 5, 0)
[19 0 0 0]
79 C
84 (79, 5, 5, 0)
[19 0 0 0]
81 G
86 (81, 5, 5, 0)
[ 0 0 0 19]
TTGGGAGTCCTTTGCACCCGGCAAGAACACGCCGTATCCSCGGCACCCGAGGGTTTGGAGACGGGGGGCTCAGTGCTGCCCGCATA
idx 4 locidx 208
5 A
10 (5, 5, 5, 0)
[ 0 21 0 0]
36 A
41 (36, 5, 5, 0)
[ 0 21 0 0]
74 C
79 (74, 5, 5, 0)
[21 0 0 0]
77 A
82 (77, 5, 5, 0)
[ 0 21 0 0]
81 C
86 (81, 5, 5, 0)
[21 0 0 0]
ACCCGACATCTAAGGTGGATAGTGTCCATTGTCCATAAATGGCACTGTGTCCAGTCAAACACCTAAAGTGAACGCCTACAACTGAG
idx 4 locidx 209
3 T
8 (3, 5, 5, 0)
[ 0 0 19 0]
15 G
20 (15, 5, 5, 0)
[ 0 0 0 19]
17 C
22 (17, 5, 5, 0)
[19 0 0 0]
36 A
41 (36, 5, 5, 0)
[ 0 19 0 0]
39 T
44 (39, 5, 5, 0)
[ 0 0 19 0]
43 A
48 (43, 5, 5, 0)
[ 0 19 0 0]
79 A
84 (79, 5, 5, 0)
[ 0 19 0 0]
85 T
90 (85, 5, 5, 0)
[ 0 0 19 0]
CTCTCTGTTGGCGACGGCTAATTGATCTCAGCACTCAGTTTAGAAACACACCTTCGTGTGAGGGCTGGCCGTCCCTTACAAAGCGT
idx 4 locidx 210
2 A
7 (2, 5, 5, 0)
[ 0 19 0 0]
11 A
16 (11, 5, 5, 0)
[ 0 19 0 0]
57 A
62 (57, 5, 5, 0)
[ 0 19 0 0]
76 C
81 (76, 5, 5, 0)
[19 0 0 0]
GGATTAAGGCAATCCGAGACCACTCACCGAGACTCTTACATTCTGCGCCCGACGCTGAGGGGCTGATATGGGTGGGCTATGTTCTG
idx 4 locidx 211
1 T
6 (1, 5, 5, 0)
[ 0 0 15 0]
23 A
28 (23, 5, 5, 0)
[ 0 15 0 0]
39 C
44 (39, 5, 5, 0)
[15 0 0 0]
54 G
59 (54, 5, 5, 0)
[ 0 0 0 15]
74 A
79 (74, 5, 5, 0)
[ 0 15 0 0]
76 G
81 (76, 5, 5, 0)
[ 0 0 0 15]
79 C
84 (79, 5, 5, 0)
[15 0 0 0]
CTTGTCCAAAAGTTAGAATCGTGACAGGCCCCCAGTGGTCTGTGATACATTAGTGACACGTAATGAAGATATCAATGCGCATGGTG
NOT HERE
idx 4 locidx 213
1 A
6 (1, 5, 5, 0)
[ 0 21 0 0]
6 T
11 (6, 5, 5, 0)
[ 0 0 21 0]
28 T
33 (28, 5, 5, 0)
[ 0 0 21 0]
39 T
44 (39, 5, 5, 0)
[ 0 0 21 0]
48 A
53 (48, 5, 5, 0)
[ 0 21 0 0]
GAGCGATACAACGCCGCTCGGATGAACCTTTGACTTCCCTAAATAAATAGCTGATCCTACTAGCGGTCCGACGCTCACTACAATTT
idx 4 locidx 214
44 A
49 (44, 5, 5, 0)
[ 1 21 0 0]
55 T
60 (55, 5, 5, 0)
[ 0 0 22 0]
CGGGTGACCCGAAACTTGTTGAAGCCCGGATGCTTTCAGACATTACTAGTGGTCGTACTCACGGTCGTGTCCCGATCGTGTTAAGG
idx 4 locidx 215
16 T
21 (16, 5, 5, 0)
[ 0 0 16 0]
51 A
56 (51, 5, 5, 0)
[ 0 16 0 0]
56 G
61 (56, 5, 5, 0)
[ 0 0 0 16]
TCACTATCAATGGGAGTTTCAATCCTCATTACTCCACCTGCAACGAGTACCATATGGTAATCTCGGAGATCGAAGCTCTAGACAGT
idx 4 locidx 216
0 C
5 (0, 5, 5, 0)
[28 0 0 0]
6 T
11 (6, 5, 5, 0)
[ 0 0 28 0]
8 C
13 (8, 5, 5, 0)
[28 0 0 0]
21 A
26 (21, 5, 5, 0)
[ 0 28 0 0]
40 C
45 (40, 5, 5, 0)
[28 0 0 0]
46 G
51 (46, 5, 5, 0)
[ 0 0 0 28]
50 G
55 (50, 5, 5, 0)
[ 0 0 0 28]
51 G
56 (51, 5, 5, 0)
[ 0 0 0 28]
73 G
78 (73, 5, 5, 0)
[ 0 0 0 28]
CCTCTTTTCCTTGTAGTGGGAATATAAGGTAGCATGCCTACGATTTGGTCGGGAGTTATGGTTCCCTCAGGGTGGCGCGGCCTAAA
idx 4 locidx 217
14 C
19 (14, 5, 5, 0)
[14 0 0 0]
18 G
23 (18, 5, 5, 0)
[ 0 0 0 14]
27 A
32 (27, 5, 5, 0)
[ 0 14 0 0]
44 T
49 (44, 5, 5, 0)
[ 0 0 14 0]
GCGTAGTAAGCTTGCATGGGAGCGACCACCCGAACGAGATATCATTCACAACGTTATACATACACTGCGCTTCCCCGGCATATTGG
idx 4 locidx 218
31 A
36 (31, 5, 5, 0)
[ 1 21 0 0]
CAAAAGCATACGAAATTCCTAGACCGAGGGTACAGCGGAACGCCCCGCTATCTTATACTTTTAAGCATATACACGGGTACTAAGCT
idx 4 locidx 219
3 C
8 (3, 5, 5, 0)
[24 0 0 0]
10 G
15 (10, 5, 5, 0)
[ 0 0 0 24]
20 G
25 (20, 5, 5, 0)
[ 0 0 0 24]
25 T
30 (25, 5, 5, 0)
[ 0 0 24 0]
73 S
78 (73, 5, 5, 0)
[11 0 0 13]
83 A
88 (83, 5, 5, 0)
[ 0 24 0 0]
TAGCTTATGAGGCTCCCTCGGGTTGTCCCGCCGGATGCTGGGCATACCTTAAGAGTGATGGCGACGACTGTATSTGAAAGCGCAGG
idx 4 locidx 220
34 T
39 (34, 5, 5, 0)
[ 0 0 20 0]
45 G
50 (45, 5, 5, 0)
[ 0 0 0 20]
73 G
78 (73, 5, 5, 0)
[ 0 0 0 20]
79 G
84 (79, 5, 5, 0)
[ 0 0 0 20]
80 Y
85 (80, 5, 5, 0)
[10 0 10 0]
82 C
87 (82, 5, 5, 0)
[19 0 0 1]
CTCAATCAGCTGGCGCTGGTGTGCGGTAAACCGATCCGTATCAGCGTTGCCCACAGTTGCAAGCCCGCGATCAGAGCCAGYTCGAC
idx 4 locidx 221
18 A
23 (18, 5, 5, 0)
[ 0 22 0 0]
34 C
39 (34, 5, 5, 0)
[22 0 0 0]
52 C
57 (52, 5, 5, 0)
[22 0 0 0]
84 C
89 (84, 5, 5, 0)
[22 0 0 0]
GCCGTTTGCGACCCACTTATTGATTGGTGTCAGGCGGCCGTCCCCGTCGGGACCGTCGGTGAATCATCATTGGCAGGTCTAGCGCC
idx 4 locidx 222
11 T
16 (11, 5, 5, 0)
[ 0 1 24 0]
34 G
39 (34, 5, 5, 0)
[ 0 0 0 25]
53 T
58 (53, 5, 5, 0)
[ 0 0 25 0]
64 T
69 (64, 5, 5, 0)
[ 0 0 25 0]
TGGCATGGCATTGCCTCATGACCCCAAGTGGCTAGGGATACGGAAGGCCGTACTAATTGAACTTTGGATGGTCTGAGGCCTCCCAT
idx 4 locidx 223
30 T
35 (30, 5, 5, 0)
[ 0 0 18 0]
63 C
68 (63, 5, 5, 0)
[18 0 0 0]
TTTTGTATTACCAGCATAGCCAGTGTTAATTGTGCGACCAAGTCCCAAGTAGTATACCACTATCTATGGGGAATGATTAGGTTGGG
idx 4 locidx 224
30 A
35 (30, 5, 5, 0)
[ 0 22 0 0]
CGATGAAACCAATTTCTCAAGAGTTATACCACTTAGGCCGACTGAGACGGGCCGTTGGACTTACTCGGAAGCGCTACTCTGAGGTG
idx 4 locidx 225
60 G
65 (60, 5, 5, 0)
[ 0 0 0 15]
GCGTCCTCTTATACGTTTCTCTGCCAGCATATCAACGGCAGTTCTTGGTTCTGCGGTTTGGCCTGGCTAGAACTTTCTAGTTACTT
idx 4 locidx 226
34 A
39 (34, 5, 5, 0)
[ 0 18 0 0]
GACACATCGACTAGTATGCTATGGCCGGAAATCAAAGATTTCCATGGTGATCTTAGTTCTTTCCCTGGTTTGCTATGAAACAATCA
idx 4 locidx 227
32 C
37 (32, 5, 5, 0)
[19 0 0 0]
63 T
68 (63, 5, 5, 0)
[ 0 0 19 0]
67 T
72 (67, 5, 5, 0)
[ 0 0 19 0]
74 A
79 (74, 5, 5, 0)
[ 0 19 0 0]
75 G
80 (75, 5, 5, 0)
[ 0 0 0 19]
GGCGTAGCTCAAAATCTTTTCGTGTTCAATCGCGACTATCGTCTTGTGACAAGCGTCCCCTTCTATCTTCGTCTAGTGAGGCACCA
idx 4 locidx 228
27 C
32 (27, 5, 5, 0)
[20 0 0 0]
28 T
33 (28, 5, 5, 0)
[ 0 0 20 0]
41 C
46 (41, 5, 5, 0)
[20 0 0 0]
47 A
52 (47, 5, 5, 0)
[ 0 20 0 0]
48 T
53 (48, 5, 5, 0)
[ 0 0 20 0]
54 G
59 (54, 5, 5, 0)
[ 0 0 0 20]
64 C
69 (64, 5, 5, 0)
[20 0 0 0]
68 C
73 (68, 5, 5, 0)
[20 0 0 0]
CGTTTAGTTCTGGAGTATATTCCGATCCTTTCACTGTCGCTCAAATAATAGCGCGAGGGAGTTACCAGCTGTTTCTAGGTAAATGC
idx 4 locidx 229
32 G
37 (32, 5, 5, 0)
[ 0 0 0 18]
41 G
46 (41, 5, 5, 0)
[ 0 0 0 18]
66 T
71 (66, 5, 5, 0)
[ 0 0 18 0]
72 T
77 (72, 5, 5, 0)
[ 0 0 18 0]
85 T
90 (85, 5, 5, 0)
[ 0 0 18 0]
AAACAAAATACGGACACCGCGTTTACGATGTTGTGGAACACGACCCCACTTTTCGATTGTGGACAGTGCCCTTTTGTGTCACCCAT
idx 4 locidx 230
16 C
21 (16, 5, 5, 0)
[20 0 0 0]
ATACACTGGACAGAGTCTTCATGATTACAACTATGAGGACTCACTTAAAGGTCCGGAATACAAGCTCTCTAACGTTCTCACCCGGG--
idx 4 locidx 231
2 T
7 (2, 5, 5, 0)
[ 0 0 15 0]
18 C
23 (18, 5, 5, 0)
[15 0 0 0]
20 C
25 (20, 5, 5, 0)
[15 0 0 0]
41 A
46 (41, 5, 5, 0)
[ 0 15 0 0]
51 G
56 (51, 5, 5, 0)
[ 0 0 0 15]
71 C
76 (71, 5, 5, 0)
[15 0 0 0]
ACTGTATGCGCTTTCGGACTCGGGAAATGCGGTCTGCGCCCACGGACGCGAGAAGTCGAGCGTAGCTCATTCGCCGGCATCACTAG
idx 4 locidx 232
5 C
10 (5, 5, 5, 0)
[21 0 0 0]
37 C
42 (37, 5, 5, 0)
[21 0 0 0]
42 G
47 (42, 5, 5, 0)
[ 0 0 0 21]
44 T
49 (44, 5, 5, 0)
[ 0 0 21 0]
45 C
50 (45, 5, 5, 0)
[21 0 0 0]
49 G
54 (49, 5, 5, 0)
[ 0 0 0 21]
55 A
60 (55, 5, 5, 0)
[ 0 21 0 0]
72 G
77 (72, 5, 5, 0)
[ 0 0 0 21]
81 G
86 (81, 5, 5, 0)
[ 0 0 0 21]
AGCCTCTGTATCTTCCGGTGGACTTCCTGTAAGGTATCTTGGGGTCTGTGTAGCGATGAGGGAAGGCTAAGTGTCCTGCGGGGATC
idx 4 locidx 233
20 C
25 (20, 5, 5, 0)
[17 0 0 0]
24 C
29 (24, 5, 5, 0)
[17 0 0 0]
28 A
33 (28, 5, 5, 0)
[ 0 17 0 0]
35 A
40 (35, 5, 5, 0)
[ 0 17 0 0]
51 G
56 (51, 5, 5, 0)
[ 0 0 0 17]
69 A
74 (69, 5, 5, 0)
[ 0 17 0 0]
TACGACTCCGTTCCCTATGCCGCACGTAAAGAGGCACGCGCTCGAAAAGTTGTTATCCGCGGACCGGATACAGCAAACTAACTTGT
idx 4 locidx 234
3 T
8 (3, 5, 5, 0)
[ 0 0 17 0]
75 T
80 (75, 5, 5, 0)
[ 0 0 17 0]
TATTCAGACACGTAAGCGCGGCTCTATCTTACACGTATCCGGGAGACTTTAGTCCTTGCTGGGTATAAATGCAGGTGCACTTGGAC
idx 4 locidx 235
13 C
18 (13, 5, 5, 0)
[17 0 0 0]
60 G
65 (60, 5, 5, 0)
[ 0 0 0 17]
67 C
72 (67, 5, 5, 0)
[17 0 0 0]
AGACACCTTGAATCTCGATCTTCCAGGCTTGATAGAATTCAAAGTCGGGGATACCGGTCCGCAATTACTCACCGCCCCCCCACATA
idx 4 locidx 236
69 T
74 (69, 5, 5, 0)
[ 0 0 20 0]
73 T
78 (73, 5, 5, 0)
[ 0 0 20 0]
AGCTATAAACTGGGATGGTAATAGATGAGGCACTACGGGGGTCCGTTCGTCAGAGCTCACGGCGCGCGCTTACTCAGCGCTATCGG
idx 4 locidx 237
4 T
9 (4, 5, 5, 0)
[ 0 0 22 0]
15 C
20 (15, 5, 5, 0)
[22 0 0 0]
17 T
22 (17, 5, 5, 0)
[ 0 0 22 0]
35 C
40 (35, 5, 5, 0)
[22 0 0 0]
58 A
63 (58, 5, 5, 0)
[ 0 22 0 0]
62 A
67 (62, 5, 5, 0)
[ 0 22 0 0]
67 G
72 (67, 5, 5, 0)
[ 0 0 0 22]
68 A
73 (68, 5, 5, 0)
[ 0 22 0 0]
TCGGTGTGTCAATGGCTTCTGTCACCTCTGTGGTCCTACTACAAAAGACAAAAGTTCCACGTAATATGATACTCTTCGAGGAGATC
idx 4 locidx 238
4 A
9 (4, 5, 5, 0)
[ 0 17 0 0]
17 C
22 (17, 5, 5, 0)
[17 0 0 0]
46 C
51 (46, 5, 5, 0)
[17 0 0 0]
52 G
57 (52, 5, 5, 0)
[ 0 0 0 17]
73 G
78 (73, 5, 5, 0)
[ 0 0 0 17]
78 A
83 (78, 5, 5, 0)
[ 0 17 0 0]
TGGGACCCGACCCTGAGCTCTCGGTGGATGGACGGGGTATTAGTGGCATCTGGGACTGACTCCAAAGAAGCATGGCCTAGTTTGCG
idx 4 locidx 239
7 T
12 (7, 5, 5, 0)
[ 0 0 19 0]
10 W
15 (10, 5, 5, 0)
[ 0 12 7 0]
26 A
31 (26, 5, 5, 0)
[ 0 19 0 0]
28 G
33 (28, 5, 5, 0)
[ 0 0 0 19]
32 A
37 (32, 5, 5, 0)
[ 0 19 0 0]
34 T
39 (34, 5, 5, 0)
[ 0 0 19 0]
47 W
52 (47, 5, 5, 0)
[ 0 12 7 0]
54 A
59 (54, 5, 5, 0)
[ 0 19 0 0]
80 T
85 (80, 5, 5, 0)
[ 0 0 19 0]
TAAGATGTACWAAGGATGATCTGAACATGGCCAGTACTAGTAGTGGGWGTTTGAATGAAAAAGCAGGTTGTAAGTTTACGTGAATC
idx 4 locidx 240
10 A
15 (10, 5, 5, 0)
[ 0 17 0 0]
32 A
37 (32, 5, 5, 0)
[ 0 17 0 0]
34 T
39 (34, 5, 5, 0)
[ 0 0 17 0]
CCTATGCGCCAGGTGCTAGTACGAGTACGGAAACTATGCGACAGAAAGCGGAGCACGAGATTGGAAAACCATAATTGCGGCATCAT
idx 4 locidx 241
29 T
34 (29, 5, 5, 0)
[ 0 0 20 0]
35 C
40 (35, 5, 5, 0)
[20 0 0 0]
56 T
61 (56, 5, 5, 0)
[ 0 0 20 0]
62 C
67 (62, 5, 5, 0)
[20 0 0 0]
82 A
87 (82, 5, 5, 0)
[ 0 20 0 0]
TGATCCGCGGTGTAGATAGTCGTTATCTATAGCTACAACATACCGACCGTGTGCTCTTAAGCCTTTCACTAAAGATTTATTCAGGA
idx 4 locidx 242
19 R
24 (19, 5, 5, 0)
[ 0 11 0 9]
20 C
25 (20, 5, 5, 0)
[20 0 0 0]
28 T
33 (28, 5, 5, 0)
[ 0 0 20 0]
72 C
75 (72, 5, 5, 2)
[20 0 0 0]
79 C
82 (79, 5, 5, 2)
[20 0 0 0]
GACTTGCCATTCACCAGAARCGGCATGATCTGCCGACGCTCCAGGGCCAATACAA-CACTAGTCGG-AAAGCCGTTCCACACACTACT
idx 4 locidx 243
11 C
16 (11, 5, 5, 0)
[21 0 0 0]
16 G
21 (16, 5, 5, 0)
[ 0 0 0 21]
19 A
24 (19, 5, 5, 0)
[ 0 21 0 0]
25 G
30 (25, 5, 5, 0)
[ 0 0 0 21]
29 T
34 (29, 5, 5, 0)
[ 0 0 21 0]
48 C
53 (48, 5, 5, 0)
[21 0 0 0]
78 Y
83 (78, 5, 5, 0)
[ 9 0 12 0]
82 G
87 (82, 5, 5, 0)
[ 0 0 0 21]
CAGAACTTCTACCCTAGAAATTAAGGAGCTTCCCTCTAACTCAGGTTACCGACGTTCCCGGACGACGACTAAGTCAACYACCGAGG
idx 4 locidx 244
4 T
9 (4, 5, 5, 0)
[ 0 0 21 0]
19 C
24 (19, 5, 5, 0)
[21 0 0 0]
28 G
33 (28, 5, 5, 0)
[ 0 0 0 21]
54 M
59 (54, 5, 5, 0)
[11 10 0 0]
72 T
77 (72, 5, 5, 0)
[ 0 0 21 0]
CATCTGCCCCGATCTTCAACGCCTAGGCGGAAAGGAACTTTGGGGCCTGTCCGGMGAGCCTTGCGATCGCACTCCAAAGAACCCTG
idx 4 locidx 245
2 G
7 (2, 5, 5, 0)
[ 0 0 0 20]
45 T
50 (45, 5, 5, 0)
[ 0 0 20 0]
68 A
73 (68, 5, 5, 0)
[ 0 20 0 0]
TGGCCAGGTGTCTATTCTACCCGCGTGAAGCCGTTAGTCTAACCCTATGGTTGGGCCGATTGCATGTGATGCACTTAGGGCTAACA
idx 4 locidx 246
22 A
27 (22, 5, 5, 0)
[ 0 19 0 0]
TGGAGGCAACATAAATCCGCCGAGATAGGATAAATTGTTCACCTTGCCGAGACTCGGACCTGGCGAGTTACGTCAGTGCGTCATTA
idx 4 locidx 247
64 A
69 (64, 5, 5, 0)
[ 0 22 0 0]
83 T
88 (83, 5, 5, 0)
[ 0 0 22 0]
84 G
89 (84, 5, 5, 0)
[ 0 0 0 22]
ATCTCAAACCAAGACATTCTGTACGAAGAGTAGAGGCTACATGTCCTCGGTCCACTGTCAGGGGAGCTTAAAGTCAGATAATCTGA
idx 4 locidx 248
4 G
9 (4, 5, 5, 0)
[ 0 0 0 21]
12 G
17 (12, 5, 5, 0)
[ 0 0 0 21]
32 C
37 (32, 5, 5, 0)
[21 0 0 0]
TGCAGGGGGCGAGTGTGGAACTGACTAAATACCACTGGAATGCGTGTGTCGGCGCAAGGTGCACGAAAGGAGCAGCAACACTCCCC
idx 4 locidx 249
1 A
6 (1, 5, 5, 0)
[ 0 21 0 0]
42 T
47 (42, 5, 5, 0)
[ 0 0 21 0]
85 A
90 (85, 5, 5, 0)
[ 0 21 0 0]
CAGTCGTCTCGAACATTAAGGTCCATTATCGTACTGACGAACTGCGACGATACAGGATTGGACGGATATCCACCAGGGCCACATCA
idx 5 locidx 250
14 G
19 (14, 5, 5, 0)
[ 0 0 0 19]
47 T
52 (47, 5, 5, 0)
[ 0 0 19 0]
48 A
53 (48, 5, 5, 0)
[ 0 19 0 0]
GTTTTATTATAAGTGAGTTCTTTCACAGTACTTAGGTTGTCCTCGAGTAGACTAGAGACCGCCTTTATTCACGAAAGCCTCAACTA
idx 5 locidx 251
4 C
9 (4, 5, 5, 0)
[21 0 0 0]
22 C
27 (22, 5, 5, 0)
[21 0 0 0]
45 T
50 (45, 5, 5, 0)
[ 0 0 21 0]
CAGTCAACGTCACTCGTAATCACCACCCTCTAATAGCGCAGGAGATCGAGGACGCAAGCAACCTTTCAAGTGGGGTTGTTTCAACC
NOT HERE
idx 5 locidx 253
8 A
13 (8, 5, 5, 0)
[ 0 22 0 0]
9 W
14 (9, 5, 5, 0)
[ 0 13 9 0]
27 W
32 (27, 5, 5, 0)
[ 0 13 9 0]
50 A
55 (50, 5, 5, 0)
[ 0 22 0 0]
CTCACAGCAWTATGCAACTGGTACGCCWGCGTACAGGCGTTGAAATCTCTAACGTATTCGCCGCGGTCTGGTGGCAGATCGACACG
idx 5 locidx 254
21 A
26 (21, 5, 5, 0)
[ 0 19 0 0]
23 A
28 (23, 5, 5, 0)
[ 0 19 0 0]
58 A
63 (58, 5, 5, 0)
[ 0 19 0 0]
67 G
72 (67, 5, 5, 0)
[ 0 0 0 19]
82 A
87 (82, 5, 5, 0)
[ 0 19 0 0]
85 A
90 (85, 5, 5, 0)
[ 0 19 0 0]
GCGTGGTGCAACTATAGGCACACATCGCTGAGTAGGCTCTCTGATCGTGTGTTCCGGCACAGATGAAGTCCGTTCCTCTGGTAATA
idx 5 locidx 255
29 T
34 (29, 5, 5, 0)
[ 0 0 22 0]
38 T
43 (38, 5, 5, 0)
[ 0 0 22 0]
60 T
65 (60, 5, 5, 0)
[ 0 0 22 0]
65 A
70 (65, 5, 5, 0)
[ 0 21 0 1]
67 G
72 (67, 5, 5, 0)
[ 0 0 0 22]
83 C
88 (83, 5, 5, 0)
[22 0 0 0]
TTCTAAGATTAGTGGCCGGACTTATCAATTGCGAGAAGTCAGGGCCAGGCACGCGATCTATGTTTACGCTAAGACAAAGCTCGCCA
idx 5 locidx 256
31 C
36 (31, 5, 5, 0)
[23 0 0 0]
49 G
54 (49, 5, 5, 0)
[ 0 0 0 23]
51 A
56 (51, 5, 5, 0)
[ 0 23 0 0]
61 C
66 (61, 5, 5, 0)
[23 0 0 0]
GTGCGAATTAATGATCGGTACCTTTACACCACGTATACAGTGCTTCGCTGCAATGGCCCAACGATCGAGCCTTCACGGTATGTCCA
idx 5 locidx 257
20 Y
25 (20, 5, 5, 0)
[ 9 0 10 0]
31 s
36 (31, 5, 5, 0)
[ 9 0 0 10]
38 A
43 (38, 5, 5, 0)
[ 0 19 0 0]
41 T
46 (41, 5, 5, 0)
[ 0 0 19 0]
46 G
51 (46, 5, 5, 0)
[ 0 0 0 19]
49 A
54 (49, 5, 5, 0)
[ 0 19 0 0]
64 T
69 (64, 5, 5, 0)
[ 0 0 19 0]
85 A
90 (85, 5, 5, 0)
[ 0 19 0 0]
AGATATCTTCCAAATGGTACYCTCGCCGTGAsACCTATAATTCCCGGAGATGCCAGAATATACATCCCAACCAGTCAGTGGTTACA
idx 5 locidx 258
19 A
24 (19, 5, 5, 0)
[ 0 21 0 0]
30 T
35 (30, 5, 5, 0)
[ 0 0 21 0]
35 C
40 (35, 5, 5, 0)
[21 0 0 0]
51 A
56 (51, 5, 5, 0)
[ 0 21 0 0]
58 G
63 (58, 5, 5, 0)
[ 0 0 0 21]
72 C
77 (72, 5, 5, 0)
[21 0 0 0]
85 T
90 (85, 5, 5, 0)
[ 0 0 21 0]
AAATCCGGGAGCGGGTGCGAACTATGGGCATTAACCCTGGAGGTTCGCCACAAGCTGGGGGTCTCCCCTTGTCCGGTGCAAGAGAT
idx 5 locidx 259
55 A
60 (55, 5, 5, 0)
[ 0 18 0 0]
76 C
81 (76, 5, 5, 0)
[18 0 0 0]
GCGACCATGTATGGATGTCGCAAACTGCCCACATGACACTAAAGGTTATACGCTTAGTCCCGTGACAGCTATCGGTCCCTTTGAAA
idx 5 locidx 260
11 A
16 (11, 5, 5, 0)
[ 0 18 0 0]
12 T
17 (12, 5, 5, 0)
[ 0 0 18 0]
28 T
33 (28, 5, 5, 0)
[ 0 0 18 0]
65 C
70 (65, 5, 5, 0)
[18 0 0 0]
CTAGAGCCAGGATGGTGCGGAGGGAAAGTTTTTATTTTCCGATACCTCGTAGCGAATCCGCTGCCCAGTTGCATCAACAGGCGTAG
idx 5 locidx 261
19 T
24 (19, 5, 5, 0)
[ 0 0 16 0]
22 A
27 (22, 5, 5, 0)
[ 0 16 0 0]
41 G
46 (41, 5, 5, 0)
[ 0 0 0 16]
TGGCTCTAGCCTAGGTTGCTTAACGGATTTAACCACCGTTAGTACCTGAATACGGCTAGACGCTTATGCGGGTCTTTAGGCCTTAT
idx 5 locidx 262
28 T
33 (28, 5, 5, 0)
[ 0 0 24 0]
62 A
67 (62, 5, 5, 0)
[ 0 24 0 0]
68 A
73 (68, 5, 5, 0)
[ 0 24 0 0]
AACCACAGACCCAAGTAGATAAGATAAATCCGCCGAAGGCTTCGAGATGAACTATGTATGCCAGATTAACAAGGAAGCGGAGCATG
idx 5 locidx 263
20 T
25 (20, 5, 5, 0)
[ 0 0 19 0]
21 C
26 (21, 5, 5, 0)
[19 0 0 0]
56 G
61 (56, 5, 5, 0)
[ 0 0 0 19]
CGGGATTCAGCGCCTGTGAATCACACAGTTTCGTTTGTTAAAGACCGAGGCGATTAGGTATATACTCGAGGTGACGACTTTAGGGA
idx 5 locidx 264
47 G
52 (47, 5, 5, 0)
[ 0 0 0 22]
64 G
69 (64, 5, 5, 0)
[ 0 0 0 22]
67 T
72 (67, 5, 5, 0)
[ 0 0 22 0]
TAGTAAAAAGTAGAATACTCAGAGCACGGTTTCTCAAATCGCGCGATGAACATATCCTACACCTGTCTCTCGTACTAACGTGTCAC
idx 5 locidx 265
38 T
43 (38, 5, 5, 0)
[ 0 0 25 0]
43 A
48 (43, 5, 5, 0)
[ 0 25 0 0]
44 T
49 (44, 5, 5, 0)
[ 0 0 25 0]
63 A
68 (63, 5, 5, 0)
[ 0 25 0 0]
79 T
84 (79, 5, 5, 0)
[ 0 0 25 0]
GTCCTGATGTGCCCCCACTGAATACGTCTAGTAGCAATTAGGAATGAGTGGGTTTGACATATTAGTAGCACAAAGTCCCTACCTAG
idx 5 locidx 266
9 T
14 (9, 5, 5, 0)
[ 0 0 22 0]
18 A
23 (18, 5, 5, 0)
[ 0 22 0 0]
37 C
42 (37, 5, 5, 0)
[22 0 0 0]
62 G
67 (62, 5, 5, 0)
[ 0 0 0 22]
CAGTTCTATTCTAAGAGGACCGTTCTCTGGGAAGAATCCGGACGCGTGACACACGTCACTCAGCAGTCGTGCTTGTTTATTAGACC
idx 5 locidx 267
16 C
21 (16, 5, 5, 0)
[20 0 0 0]
24 G
29 (24, 5, 5, 0)
[ 0 0 0 20]
32 C
37 (32, 5, 5, 0)
[20 0 0 0]
46 G
51 (46, 5, 5, 0)
[ 0 0 0 20]
49 A
54 (49, 5, 5, 0)
[ 0 20 0 0]
62 A
67 (62, 5, 5, 0)
[ 0 20 0 0]
84 T
89 (84, 5, 5, 0)
[ 0 0 20 0]
CATTAGGGCAATTTCGCGACAGTCGGAAGCTACGCCGGGACAACGAGTCAAAAATACCGCGAACGCTTCAGGATGATATTTAGTTG
idx 5 locidx 268
3 T
8 (3, 5, 5, 0)
[ 0 0 17 0]
52 A
57 (52, 5, 5, 0)
[ 0 17 0 0]
74 A
79 (74, 5, 5, 0)
[ 0 17 0 0]
CCGTAGGGAATGAAATAACTACCTGTGCCGCCCTCTATGGGCGAGGTTCCCAAAACAACTAGAGTAGTATAGGTAGGGAAGGCTGC
idx 5 locidx 269
11 A
16 (11, 5, 5, 0)
[ 0 21 0 0]
19 C
24 (19, 5, 5, 0)
[21 0 0 0]
22 A
27 (22, 5, 5, 0)
[ 0 21 0 0]
42 A
47 (42, 5, 5, 0)
[ 0 21 0 0]
51 C
56 (51, 5, 5, 0)
[21 0 0 0]
81 C
86 (81, 5, 5, 0)
[21 0 0 0]
ATACCTAGGGTACCATTTTCCCATCACGCAGGCGCTCTGGCTATACGGTTCCATGCGTGAATTTTAAGCGCCGATAAGGCCCGGCG
idx 5 locidx 270
0 G
5 (0, 5, 5, 0)
[ 0 0 0 19]
9 T
14 (9, 5, 5, 0)
[ 0 0 19 0]
20 C
25 (20, 5, 5, 0)
[19 0 0 0]
56 C
61 (56, 5, 5, 0)
[19 0 0 0]
76 C
81 (76, 5, 5, 0)
[19 0 0 0]
GGTTTGTAATCACCGCCCTTCGTTTCTCTCTCGTTTCCGTGGGGCTCCGAATTGCCCTGGTACTCTAAAGTCACATCGTAAGTAAA
idx 5 locidx 271
15 A
20 (15, 5, 5, 0)
[ 0 21 0 0]
18 A
23 (18, 5, 5, 0)
[ 0 21 0 0]
21 G
26 (21, 5, 5, 0)
[ 0 0 0 21]
49 A
54 (49, 5, 5, 0)
[ 0 21 0 0]
53 C
58 (53, 5, 5, 0)
[21 0 0 0]
83 C
88 (83, 5, 5, 0)
[21 0 0 0]
TGGCCAGCGCCGTCAAAAACGGTCATGTCTGACAGTATGAAGTCATGAGACCCCGGGAAGGTTGGTACCACGCTGACATTATCCAC
idx 5 locidx 272
1 C
6 (1, 5, 5, 0)
[18 0 0 0]
55 T
60 (55, 5, 5, 0)
[ 0 0 18 0]
61 K
66 (61, 5, 5, 0)
[0 0 9 9]
75 T
80 (75, 5, 5, 0)
[ 0 0 18 0]
ACGTTTTGCCGTAATGGTTTCGGACACATTGGCCTTTTGCGTCTCCAGTTTGACGTCGAATKTGCAGGTATGTAGTAACCCCGATC
idx 5 locidx 273
27 T
32 (27, 5, 5, 0)
[ 0 0 23 0]
28 T
33 (28, 5, 5, 0)
[ 0 0 23 0]
35 G
40 (35, 5, 5, 0)
[ 0 0 0 23]
40 A
45 (40, 5, 5, 0)
[ 0 23 0 0]
60 A
65 (60, 5, 5, 0)
[ 0 23 0 0]
73 C
78 (73, 5, 5, 0)
[23 0 0 0]
75 T
80 (75, 5, 5, 0)
[ 0 0 23 0]
79 G
84 (79, 5, 5, 0)
[ 0 0 0 23]
GCTTCAGCCAGCCTCCGATGTTTTTGGTTATCTGGGCATTAGCCGGGAAAAACTACGACCATGCACCAATGTACTTACCGGGTACG
idx 5 locidx 274
21 A
26 (21, 5, 5, 0)
[ 0 22 0 0]
27 A
32 (27, 5, 5, 0)
[ 0 22 0 0]
GCGTAATGTGGGTCGACCGCCAAAAACATAAAGAGACTAGCCGCTCCTATACACGCGCAGTGAAGCCCGTATACATGGAAATTTTG
idx 5 locidx 275
81 C
86 (81, 5, 5, 0)
[23 0 0 0]
AGCGCTGTAAGTACGAAACGCTACTCGAGCTCTACCGTCCATTCAGCCTACCTTACGTGTATTATAGGTTAGACCGACACCCGGCC
idx 5 locidx 276
35 R
40 (35, 5, 5, 0)
[ 0 14 0 10]
38 y
43 (38, 5, 5, 0)
[10 0 14 0]
54 A
59 (54, 5, 5, 0)
[ 0 24 0 0]
63 T
68 (63, 5, 5, 0)
[ 0 0 24 0]
CCCCAATGGATCGGCGCACGTCCAGATACGGTGGCRTCyAGCCTCTATTTGCTCAAAGGAAGATATTGTTCAGTTTTATCCAGCCG
idx 5 locidx 277
57 T
62 (57, 5, 5, 0)
[ 0 0 18 0]
68 A
73 (68, 5, 5, 0)
[ 0 18 0 0]
CACTTCAGACTCTAAAACGGCGCTCTAAATCTATAGAGATCCCGGCGACTTTTCGGATAAGTTCGGTTACCGTTTACCACGACCCA
idx 5 locidx 278
32 G
37 (32, 5, 5, 0)
[ 0 0 0 18]
GATAGCTCTGACGTAGATCCCTACCTGATGCGGCCGTTAAGTCATTGCTGCGCACGGATTCAGCAACTTTTCGCATAGTGATAATT
idx 5 locidx 279
21 G
26 (21, 5, 5, 0)
[ 0 0 0 17]
40 A
45 (40, 5, 5, 0)
[ 0 17 0 0]
69 T
74 (69, 5, 5, 0)
[ 0 0 17 0]
ATGGGTGAATCTACTATAGCCGTCCCAACCGGGACCGTTGATTCCTAGGAGGATGCAGCGGAGCTTAAATGTGGACCTTCCTCACT
idx 5 locidx 280
23 A
28 (23, 5, 5, 0)
[ 0 19 0 0]
36 G
41 (36, 5, 5, 0)
[ 0 0 0 19]
50 T
55 (50, 5, 5, 0)
[ 0 0 19 0]
71 C
76 (71, 5, 5, 0)
[19 0 0 0]
74 A
79 (74, 5, 5, 0)
[ 0 19 0 0]
83 C
88 (83, 5, 5, 0)
[19 0 0 0]
85 A
90 (85, 5, 5, 0)
[ 0 19 0 0]
ACTCTTCCTCGTTGGGGTTTGAGATAACCACCTCCTGACCTCATCAAACTTTCGTCCCTGGCAACGGGCCGCGTAGCACCTATCCA
idx 5 locidx 281
4 G
9 (4, 5, 5, 0)
[ 0 0 0 20]
6 A
11 (6, 5, 5, 0)
[ 0 20 0 0]
69 G
74 (69, 5, 5, 0)
[ 0 0 0 20]
72 A
77 (72, 5, 5, 0)
[ 0 20 0 0]
CGGAGGATCAATAGGCATATACCGCAGATTCCCCCGGAGTTACATGGATAGCTGTCGTGCATACTACGAGTAAGTCTAGCCTGCGC
idx 5 locidx 282
11 T
16 (11, 5, 5, 0)
[ 0 0 21 0]
28 A
33 (28, 5, 5, 0)
[ 0 21 0 0]
31 A
36 (31, 5, 5, 0)
[ 0 21 0 0]
57 A
62 (57, 5, 5, 0)
[ 0 21 0 0]
72 C
77 (72, 5, 5, 0)
[21 0 0 0]
80 A
85 (80, 5, 5, 0)
[ 0 21 0 0]
AGCGATTTCGGTGCAAGGCTCCCGGTTAACTAGGATATACGCTGAGGTCCGACAAAAAACGCTAATAAGTTCCAGCAGCTATACTC
idx 5 locidx 283
45 G
50 (45, 5, 5, 0)
[ 0 0 0 23]
56 G
61 (56, 5, 5, 0)
[ 0 0 0 23]
79 C
84 (79, 5, 5, 0)
[23 0 0 0]
GGAAGCTCTATTAGTCACTCGCGGGAGAACGGGGGTTAGCCGGGGGCCAGCTCGGAGCCTACTAATAAGTCGTGCACTTCGCAAAG
idx 5 locidx 284
73 G
78 (73, 5, 5, 0)
[ 0 0 0 20]
84 G
89 (84, 5, 5, 0)
[ 0 0 0 20]
TTAGCGGTACGTTCGCAGCTCGGCCATAAAGCTCCCTGAGCAGATGTGCCACATCGCTGCGGAGACGACGGTAGAGAGAGGGACGA
idx 5 locidx 285
77 C
82 (77, 5, 5, 0)
[16 0 0 0]
CACTCTAGAGGGACCCAATGGTCCCAATAGTCAATATCTGGAAGCGTCTTGAATCCCCGGGGCTCCGAAGGGAAGTGCAGGAGACG
idx 5 locidx 286
3 A
8 (3, 5, 5, 0)
[ 0 14 0 0]
9 A
14 (9, 5, 5, 0)
[ 0 14 0 0]
TAGACTTAAAACAAGGCTCTATGGCCCTGGTTATAAATCCATCAGAGAAGTATTTGTCTCCTAGGGTAAATTTATCAAGCACCGGG
idx 5 locidx 287
10 G
15 (10, 5, 5, 0)
[ 0 1 0 20]
11 T
16 (11, 5, 5, 0)
[ 0 0 21 0]
18 G
23 (18, 5, 5, 0)
[ 0 0 0 21]
49 C
54 (49, 5, 5, 0)
[21 0 0 0]
52 T
57 (52, 5, 5, 0)
[ 0 0 21 0]
53 A
58 (53, 5, 5, 0)
[ 0 21 0 0]
61 G
66 (61, 5, 5, 0)
[ 0 0 0 21]
70 G
75 (70, 5, 5, 0)
[ 0 0 0 21]
AGGACCTTTCGTAACTGAGACATGAATGAAGAAGTCACACAGCGCTGAACAGTAAGGGGGAGCACACTTCGCTCGATCCCGTACCG
idx 5 locidx 288
15 C
20 (15, 5, 5, 0)
[17 0 0 0]
40 T
45 (40, 5, 5, 0)
[ 0 0 17 0]
66 G
71 (66, 5, 5, 0)
[ 0 0 0 17]
73 C
78 (73, 5, 5, 0)
[17 0 0 0]
ACGGAATTAAGTATCCCGTCTTAATCGCCTCCACTCCTGCTAGCCAACAGTGGAGATTAAGACTTCGGCCCACCACTGTATCAGCT-
idx 5 locidx 289
0 A
5 (0, 5, 5, 0)
[ 0 23 0 0]
24 C
29 (24, 5, 5, 0)
[23 0 0 0]
56 A
61 (56, 5, 5, 0)
[ 0 23 0 0]
ACGCGCGCATTAGTTAATCGGGCGCGAGGAAACGTAGCAGCAAGTATTTCAGTAAAATTCCCCTGCCCGCGAAATGCTCAACCGGA
idx 5 locidx 290
6 G
11 (6, 5, 5, 0)
[ 0 0 0 20]
20 A
25 (20, 5, 5, 0)
[ 0 20 0 0]
70 T
75 (70, 5, 5, 0)
[ 0 0 20 0]
CAACCCGACTAAGATGGCTTACGTATGGGTACTAGCAGGTATATTAACGTTGTACGACAGTGCCTATACTTTCCAGTGCATCGGGG
idx 5 locidx 291
17 A
22 (17, 5, 5, 0)
[ 0 18 0 0]
39 C
44 (39, 5, 5, 0)
[18 0 0 0]
42 R
47 (42, 5, 5, 0)
[ 0 12 0 6]
48 G
53 (48, 5, 5, 0)
[ 0 0 0 18]
55 G
60 (55, 5, 5, 0)
[ 0 0 0 18]
58 T
63 (58, 5, 5, 0)
[ 0 0 18 0]
70 G
75 (70, 5, 5, 0)
[ 0 0 0 18]
AGTGTGTTGCCAAGTGAAGACCTCCCCTTATCACATGATCTTRCCTCGGGTCGATGGATACGATTGCTGCGTTCAAAATGAGCTAC
idx 5 locidx 292
5 C
10 (5, 5, 5, 0)
[22 0 0 0]
20 C
25 (20, 5, 5, 0)
[22 0 0 0]
52 G
57 (52, 5, 5, 0)
[ 0 0 0 22]
85 C
90 (85, 5, 5, 0)
[22 0 0 0]
CATACCGACCATAGCTCGCACGGTTAAAGCAGAGTCGTACCTTCTGTCGCTGGAGAAGGCACGAGAGACTGGTATGCTAGTTGATC
idx 5 locidx 293
10 G
15 (10, 5, 5, 0)
[ 0 0 0 19]
54 T
59 (54, 5, 5, 0)
[ 0 0 19 0]
75 G
80 (75, 5, 5, 0)
[ 0 0 0 19]
GAGTGTTATTGATAATTGGCGTCCGTCCTGACATCGAGCCGAGGGCAGGAACCTTGAGAAGCAAGACCCACCTGAGGGAGGCTCGC
idx 5 locidx 294
7 G
12 (7, 5, 5, 0)
[ 0 0 0 13]
67 G
72 (67, 5, 5, 0)
[ 0 0 0 13]
79 C
84 (79, 5, 5, 0)
[13 0 0 0]
ATTGAAAGGCGAGACTGTAGAATTCATCTGGATTTCTGGATGTTGGGTGTTGAAGTCAAAAAGTCAGGAACTACGCTAGCTAGCAG
idx 5 locidx 295
4 C
9 (4, 5, 5, 0)
[22 0 0 0]
11 G
16 (11, 5, 5, 0)
[ 0 0 0 22]
16 T
21 (16, 5, 5, 0)
[ 0 0 22 0]
28 C
33 (28, 5, 5, 0)
[22 0 0 0]
53 A
58 (53, 5, 5, 0)
[ 0 22 0 0]
56 G
61 (56, 5, 5, 0)
[ 0 0 0 22]
76 C
81 (76, 5, 5, 0)
[22 0 0 0]
CCCACACTCAAGCCAGTACGCTTGGACACGGAGTCCCTCGAATTCGACCATGAAAAGGGCCAATAGGTTCAGGTTGCGTTTCGTCA
idx 5 locidx 296
27 C
32 (27, 5, 5, 0)
[19 0 0 0]
30 C
35 (30, 5, 5, 0)
[19 0 0 0]
33 C
38 (33, 5, 5, 0)
[19 0 0 0]
CCAAAGAGCATAATAGAGCATAAGTCTCTGCGGCCTTAGTCGCAGTTAAGCGACAGTCGCTCAGGCCAACGAGGAATTAGCCCCCT
idx 5 locidx 297
23 G
28 (23, 5, 5, 0)
[ 0 0 0 19]
28 A
33 (28, 5, 5, 0)
[ 0 19 0 0]
42 A
47 (42, 5, 5, 0)
[ 0 19 0 0]
45 A
50 (45, 5, 5, 0)
[ 0 19 0 0]
74 A
79 (74, 5, 5, 0)
[ 0 19 0 0]
77 G
82 (77, 5, 5, 0)
[ 0 0 0 19]
82 T
87 (82, 5, 5, 0)
[ 0 0 19 0]
ATCCCTCGTCAAACAGTCAAATGGATAGAACCCAATGCTATTATTAGGGCTTGGAGAACGTCTATACTGCCGGTAGCGCGCATCGC
idx 5 locidx 298
50 A
55 (50, 5, 5, 0)
[ 0 19 0 0]
66 A
71 (66, 5, 5, 0)
[ 0 19 0 0]
71 T
76 (71, 5, 5, 0)
[ 0 0 19 0]
72 C
77 (72, 5, 5, 0)
[19 0 0 0]
CGCCTCCAGTGGAAACTCGTAAGTGTGACGTCACTGTACATTTAAGAGCAAACTTCTATGAGCACGATCGGTCCTGAGTTACGATG
idx 5 locidx 299
32 C
37 (32, 5, 5, 0)
[19 0 0 0]
38 T
43 (38, 5, 5, 0)
[ 0 0 19 0]
56 T
61 (56, 5, 5, 0)
[ 0 0 19 0]
CCCAGGAAAATGAATGCGACGCACAGGACGGTCCGTTGTTGATAGCCTGCGATGCTTGTGCAAATGGACGTCAGACACTGAACCGG
idx 6 locidx 300
7 G
12 (7, 5, 5, 0)
[ 0 0 0 21]
48 C
53 (48, 5, 5, 0)
[21 0 0 0]
GAAGATAGTCTCGTACTGTGTATGTCTTTAGGCCTGACCGCAACCATACGTTATTTCACAAAGTCCTGACGAATGCCAACATTTAC
idx 6 locidx 301
36 C
41 (36, 5, 5, 0)
[21 0 0 0]
TTCGGGGCCGCCTCTGAGTGCGTCGAGATTTGGTGTCTAATGGGACGACGTTGAGGAGGGCCTCGGAGATCACCAATGAACGTGCC
idx 6 locidx 302
5 A
10 (5, 5, 5, 0)
[ 0 17 0 0]
30 G
35 (30, 5, 5, 0)
[ 0 0 0 17]
44 G
49 (44, 5, 5, 0)
[ 0 0 0 17]
51 C
56 (51, 5, 5, 0)
[17 0 0 0]
53 G
58 (53, 5, 5, 0)
[ 0 0 0 17]
59 A
64 (59, 5, 5, 0)
[ 0 17 0 0]
62 G
67 (62, 5, 5, 0)
[ 0 0 0 17]
TTTATATCCTGGTGCTCGGATCCCCAATCAGCGGCGCAATTAAGGGCATAGCAGAAGGGAACGGGACGCGGACAGAATAGCATCAT
idx 6 locidx 303
3 C
8 (3, 5, 5, 0)
[20 0 0 0]
29 G
34 (29, 5, 5, 0)
[ 0 0 0 20]
42 T
47 (42, 5, 5, 0)
[ 0 0 20 0]
60 T
65 (60, 5, 5, 0)
[ 0 0 20 0]
69 A
74 (69, 5, 5, 0)
[ 0 20 0 0]
82 G
87 (82, 5, 5, 0)
[ 0 0 0 20]
83 A
88 (83, 5, 5, 0)
[ 0 20 0 0]
85 G
90 (85, 5, 5, 0)
[ 0 0 0 20]
AATCTCGTGCTTATCTGGGTAGGACTTACGCTAGCGCGCACATCGTCGAATGGGAGCCGCTAGACGTTGATGCACACTTCTAGAGG
idx 6 locidx 304
3 T
8 (3, 5, 5, 0)
[ 0 0 22 0]
15 T
20 (15, 5, 5, 0)
[ 0 0 22 0]
46 G
51 (46, 5, 5, 0)
[ 0 0 0 22]
68 A
73 (68, 5, 5, 0)
[ 0 22 0 0]
ACGTGCATGCTATCATGCTAATATCCCGGGGAGCCTCGTCGTGACTGCTTGGTTCCTGAAATCTTATTAACTCCCGCATGTCCGCC
idx 6 locidx 305
6 A
11 (6, 5, 5, 0)
[ 0 21 0 0]
46 G
51 (46, 5, 5, 0)
[ 0 0 0 21]
52 A
57 (52, 5, 5, 0)
[ 0 21 0 0]
53 A
58 (53, 5, 5, 0)
[ 0 21 0 0]
GATCAGATCGGAGGGAAGCTAGCGAACTGTCCTGACCGTGATTTTTGTGTCAAAAGACGCCTGTAGCAGGGGAATGGGACCATACG
idx 6 locidx 306
1 T
6 (1, 5, 5, 0)
[ 0 0 21 0]
8 A
13 (8, 5, 5, 0)
[ 0 21 0 0]
12 C
17 (12, 5, 5, 0)
[21 0 0 0]
22 C
27 (22, 5, 5, 0)
[21 0 0 0]
44 G
49 (44, 5, 5, 0)
[ 0 0 0 21]
CTAATTGAATATCATCGATTTCCAAAGTTATTTGTGATCCAGGTGGACAAGAAGGTCATCGGATGGCGGTTGTGGAAGGATCTAGT
idx 6 locidx 307
7 C
12 (7, 5, 5, 0)
[17 0 0 0]
25 T
30 (25, 5, 5, 0)
[ 0 0 17 0]
48 C
53 (48, 5, 5, 0)
[17 0 0 0]
50 C
55 (50, 5, 5, 0)
[17 0 0 0]
62 C
67 (62, 5, 5, 0)
[17 0 0 0]
68 C
73 (68, 5, 5, 0)
[17 0 0 0]
CTCCGAACTCAGGTAGTGGACACGGTCTGCAACTTGGTATGCTTTATCCCCCATGCACGCCACTTCATCGGCGACTCTGGATAATG
idx 6 locidx 308
25 A
30 (25, 5, 5, 0)
[ 0 16 0 0]
41 C
46 (41, 5, 5, 0)
[16 0 0 0]
60 A
65 (60, 5, 5, 0)
[ 0 16 0 0]
65 C
70 (65, 5, 5, 0)
[16 0 0 0]
73 T
78 (73, 5, 5, 0)
[ 0 0 16 0]
79 A
84 (79, 5, 5, 0)
[ 0 16 0 0]
84 C
89 (84, 5, 5, 0)
[16 0 0 0]
GGCGATGAATCTACTTCTTAAGTGTAGTATTTGTTTATTCCCTAATAGGCCGTCAGAACCAATAACGTCTGATTATGGTAACATCA
idx 6 locidx 309
1 T
6 (1, 5, 5, 0)
[ 0 0 19 0]
8 A
13 (8, 5, 5, 0)
[ 0 19 0 0]
9 G
14 (9, 5, 5, 0)
[ 0 0 0 19]
ATACGATAAGATACTTACAGAACTCGCACGAACCAGACATACCTTTATCTCGGTATACTCTCGCCACTACCACGTCATACTACCCA
idx 6 locidx 310
9 G
14 (9, 5, 5, 0)
[ 0 0 0 20]
55 G
60 (55, 5, 5, 0)
[ 0 0 0 20]
GCATAATCGGCCTTGCAGTTTTGCAATTCAACAAAACAGACCCTCAACCTACAGTGACATTGGTAGCCTGCCTTAATGTCTCGAAT
NOT HERE
idx 6 locidx 312
24 T
29 (24, 5, 5, 0)
[ 0 0 21 0]
42 T
47 (42, 5, 5, 0)
[ 0 0 21 0]
53 G
58 (53, 5, 5, 0)
[ 0 0 0 21]
CGCGCGGGGTTGCGCACGCGCTCATACTGTGGATTCTCTAATTAATGAGAGTTGGTATTCTGGTGCGCGAACATTCTGGTGCACGG
idx 6 locidx 313
6 W
11 (6, 5, 5, 0)
[ 0 11 11 0]
17 T
22 (17, 5, 5, 0)
[ 0 0 22 0]
29 T
34 (29, 5, 5, 0)
[ 0 0 22 0]
31 A
36 (31, 5, 5, 0)
[ 0 22 0 0]
49 G
54 (49, 5, 5, 0)
[ 0 0 0 22]
61 A
66 (61, 5, 5, 0)
[ 0 22 0 0]
76 A
81 (76, 5, 5, 0)
[ 0 22 0 0]
AAGTTTWGCGGTAATCCTCCCATTGCAATTTACTGTGCCGTGAACTCCGGGAACGTTACTCATTAGTGGGTAAGTCACGACGCCTA
idx 6 locidx 314
12 G
17 (12, 5, 5, 0)
[ 0 0 0 23]
49 C
54 (49, 5, 5, 0)
[23 0 0 0]
81 A
86 (81, 5, 5, 0)
[ 0 23 0 0]
CCCTGGTTCGGCGTGAGTGCTACCACTCTGGGCTGCTGGCCACCATTAACACTATCCTCATAAACCAACTACCCCAACGTAAGCAC
idx 6 locidx 315
0 C
5 (0, 5, 5, 0)
[21 0 0 0]
28 A
33 (28, 5, 5, 0)
[ 0 21 0 0]
37 T
42 (37, 5, 5, 0)
[ 0 0 21 0]
45 C
50 (45, 5, 5, 0)
[21 0 0 0]
69 G
74 (69, 5, 5, 0)
[ 0 0 0 21]
84 G
89 (84, 5, 5, 0)
[ 0 0 0 21]
CACGTATGGGGGACGATCGCAGAAGGTGATAGAGTTCTGCTCACCCCGGAACCTACGAGTCAGTATTTAGTTACCTTCTCGACAGG
idx 6 locidx 316
10 T
15 (10, 5, 5, 0)
[ 0 0 21 0]
CCGTTGGACCTTCTAGTCAGTTGGCGTTGTCCAACTAGCCCCTACTCTAATGCTCTCACGCCTCGCATCATCGCCGGCGTTCTAAC
idx 6 locidx 317
55 G
60 (55, 5, 5, 0)
[ 0 0 0 21]
77 T
82 (77, 5, 5, 0)
[ 0 0 21 0]
TCTTTGGGGTTAACAACTTAGGGGCAGGGTTCGGGTGCACAGTTAGGTAAGGCCCGCACATTTTCCCAGTTAGCGTTTATAGCACG
idx 6 locidx 318
1 T
6 (1, 5, 5, 0)
[ 0 0 21 0]
11 T
16 (11, 5, 5, 0)
[ 0 0 21 0]
30 C
35 (30, 5, 5, 0)
[21 0 0 0]
42 G
47 (42, 5, 5, 0)
[ 0 0 0 21]
47 C
52 (47, 5, 5, 0)
[21 0 0 0]
TTCCTCGCCTGTGGGTATCGACACGGGAGCCATAGTCTGCGGGACCCCTGGATCCCAGTAGCAAACTCCTTGCTCAACCAGACCTT
idx 6 locidx 319
16 T
21 (16, 5, 5, 0)
[ 0 0 16 0]
80 C
85 (80, 5, 5, 0)
[16 0 0 0]
CCCCAATAGACTGGAGTGACCAACACTCCGTGACGGGATTTAGTTTAGGCACCCAGGAGTGATCTATACAAACTTGAAGACAGAGG
idx 6 locidx 320
25 T
30 (25, 5, 5, 0)
[ 0 0 20 0]
48 A
53 (48, 5, 5, 0)
[ 0 20 0 0]
70 G
75 (70, 5, 5, 0)
[ 0 0 0 20]
73 G
78 (73, 5, 5, 0)
[ 0 0 0 20]
76 T
81 (76, 5, 5, 0)
[ 0 0 20 0]
84 C
89 (84, 5, 5, 0)
[20 0 0 0]
85 T
90 (85, 5, 5, 0)
[ 0 0 20 0]
GATCTATTAGTGTTACGTACATTAATGTTATAATACCAGATAGCCTAAAGGAGCCGATCACTGAACTTGTGAGGCATAGGTCCTCT
idx 6 locidx 321
11 G
16 (11, 5, 5, 0)
[ 0 0 0 20]
57 A
62 (57, 5, 5, 0)
[ 0 20 0 0]
GCCTAATCTGCGTACGAACGCGGTTCTGACACGCACATATGATCCAGGATCAAATTAAGTAGGTCCTGAAGGTGCGATAGGTTGCG
idx 6 locidx 322
22 C
27 (22, 5, 5, 0)
[14 0 0 1]
24 A
29 (24, 5, 5, 0)
[ 0 15 0 0]
72 T
77 (72, 5, 5, 0)
[ 0 0 15 0]
CATTTACTTATAAGCAACATAGCCAGGATGTCTACAACCAGTCGGCTTTGACGATGTACATCGAAAAGGGAATACAGCATAGCATA
idx 6 locidx 323
6 A
11 (6, 5, 5, 0)
[ 0 21 0 0]
19 G
24 (19, 5, 5, 0)
[ 0 0 0 21]
28 G
33 (28, 5, 5, 0)
[ 0 0 0 21]
49 G
54 (49, 5, 5, 0)
[ 0 0 0 21]
67 C
72 (67, 5, 5, 0)
[21 0 0 0]
68 A
73 (68, 5, 5, 0)
[ 0 21 0 0]
CGATCTAGCCGTAAAAGTTGCTTGCAGAGCGGAGCACTGCGGGGCAATCGCCTGATATATCCTAAAGCAGGATCAGGCCGTGTCGT
idx 6 locidx 324
45 A
50 (45, 5, 5, 0)
[ 0 21 0 0]
49 T
54 (49, 5, 5, 0)
[ 0 0 21 0]
78 G
83 (78, 5, 5, 0)
[ 0 0 0 21]
CTAGCTCAGGTCGCAAGCCGTCCCCCTGGGTCGACTACCGCCCCAATTGTATGAAGACCAAGGGACCAGGCCATGCATGGTTGCGC
idx 6 locidx 325
12 G
17 (12, 5, 5, 0)
[ 0 0 0 17]
36 T
41 (36, 5, 5, 0)
[ 0 0 17 0]
43 A
48 (43, 5, 5, 0)
[ 0 17 0 0]
69 A
74 (69, 5, 5, 0)
[ 0 17 0 0]
CGGGGCCTCAAAGGGTACGCAGTCTGTATCCATCACTAACCACACCTGAGATCGGAAGAGGTGTTGTGAACTATGGGACCTCAGAG
idx 6 locidx 326
23 C
28 (23, 5, 5, 0)
[23 0 0 0]
40 T
45 (40, 5, 5, 0)
[ 0 0 23 0]
56 T
61 (56, 5, 5, 0)
[ 0 0 23 0]
GACCCCTATATACAACCTGCAGACAATTCAATCGGGGGTATCAACTAATAATGGGATGGGGTGCAGTATAAAGTCCAACGACGGCA
idx 6 locidx 327
29 G
34 (29, 5, 5, 0)
[ 0 0 0 17]
50 A
55 (50, 5, 5, 0)
[ 0 17 0 0]
53 G
58 (53, 5, 5, 0)
[ 0 0 0 17]
63 C
68 (63, 5, 5, 0)
[17 0 0 0]
68 T
73 (68, 5, 5, 0)
[ 0 0 17 0]
75 A
80 (75, 5, 5, 0)
[ 0 17 0 0]
CTTGTGAATCTCTTTAGCCTAGTCGTAAAGAAATAATTCGAAAAAAACCAACAGTCTTGTCGTCGGCTTCTTGATATCTTCCAACG
idx 6 locidx 328
5 G
10 (5, 5, 5, 0)
[ 0 0 0 14]
34 C
39 (34, 5, 5, 0)
[14 0 0 0]
39 C
44 (39, 5, 5, 0)
[14 0 0 0]
72 A
77 (72, 5, 5, 0)
[ 0 14 0 0]
TACAAGCTGGCCACGCTTCAGATAATGCCAATGCCCTTTCTAGCAAGTAGAGCTCTACTGGGCTTTAGATGGAATTTGTTTAGTAT
idx 6 locidx 329
15 T
20 (15, 5, 5, 0)
[ 0 0 21 0]
34 C
39 (34, 5, 5, 0)
[21 0 0 0]
74 C
79 (74, 5, 5, 0)
[21 0 0 0]
79 A
84 (79, 5, 5, 0)
[ 0 21 0 0]
CGCGGATATCGATCATTGCCCCTTTAACTGCCTGCTAAGGATGCTCCACCCAGGCTCCACGAGGTCCCGCCTACCCCCCACCTGAC
idx 6 locidx 330
48 G
53 (48, 5, 5, 0)
[ 0 0 0 19]
68 A
73 (68, 5, 5, 0)
[ 0 19 0 0]
GCAAGTAACGCGCTCGTGACTCGATAAGAGTAGCGCGGTATAGGCCTAGGGTAGATGTGTTCCAATTGAATACTCTCGCCCGGCCT
idx 6 locidx 331
20 G
25 (20, 5, 5, 0)
[ 0 0 0 24]
44 C
49 (44, 5, 5, 0)
[24 0 0 0]
56 C
61 (56, 5, 5, 0)
[24 0 0 0]
75 T
80 (75, 5, 5, 0)
[ 0 0 24 0]
76 T
81 (76, 5, 5, 0)
[ 0 0 24 0]
CGGCGAATTGGCCTGTATACGTTAGCCCTGTGCATTACCGCCTGCGGCAGTGAGAACGGCCCGAATGAACACAGGTTAAACGTTAG
idx 6 locidx 332
2 G
7 (2, 5, 5, 0)
[ 0 0 0 20]
10 C
15 (10, 5, 5, 0)
[20 0 0 0]
35 C
40 (35, 5, 5, 0)
[20 0 0 0]
40 M
45 (40, 5, 5, 0)
[ 8 12 0 0]
42 T
47 (42, 5, 5, 0)
[ 0 0 20 0]
46 C
51 (46, 5, 5, 0)
[20 0 0 0]
72 A
77 (72, 5, 5, 0)
[ 0 20 0 0]
GCGGAAATAACTAGAAGCATTCCAAAATTACTAAACCAAGMTTCATCGCCCACCGTAGCGCACGACCGCTTCACCTAACTCCAATC
idx 6 locidx 333
0 C
5 (0, 5, 5, 0)
[23 0 0 0]
1 T
6 (1, 5, 5, 0)
[ 0 0 23 0]
59 G
64 (59, 5, 5, 0)
[ 0 0 0 23]
CTCCGGTCCGAAGCTATAGCCCCACCTGTTTAAATAGACAACATTCCATTGCTAGTACGGAGACGAATGTATGAGAGAGGCATACT
idx 6 locidx 334
3 C
8 (3, 5, 5, 0)
[21 0 0 0]
69 T
74 (69, 5, 5, 0)
[ 0 0 21 0]
73 A
78 (73, 5, 5, 0)
[ 0 21 0 0]
83 C
88 (83, 5, 5, 0)
[20 0 0 1]
TTGCGTCCCTTTAGGGGCAAGCATTGATGTAAGAATACATGGGCGCCCTTCTTATTACAGGCCCATGGATCGTAGCACGACGGCGT
idx 6 locidx 335
22 T
27 (22, 5, 5, 0)
[ 0 0 22 0]
63 A
68 (63, 5, 5, 0)
[ 0 22 0 0]
68 C
73 (68, 5, 5, 0)
[22 0 0 0]
81 A
86 (81, 5, 5, 0)
[ 0 22 0 0]
CGCTGCAGCCACCGTCCATGGCTCATTTCGTTATATCACTAGCGTAGTGAGGACTGCGATTCGAGGAGCGCCTTAAATTAAAAAAA
idx 6 locidx 336
51 A
56 (51, 5, 5, 0)
[ 0 16 0 0]
55 C
60 (55, 5, 5, 0)
[16 0 0 0]
66 G
71 (66, 5, 5, 0)
[ 0 0 0 16]
80 G
85 (80, 5, 5, 0)
[ 0 0 0 16]
81 C
86 (81, 5, 5, 0)
[16 0 0 0]
ATTCAGGGACCAGAATTCACTCGGTGATGCATGTCATCACCCCGTCCGTCTACACCCCAGTGGACGGACTGTCTATGGTGGCTAAC
idx 6 locidx 337
11 A
16 (11, 5, 5, 0)
[ 0 20 0 0]
14 C
19 (14, 5, 5, 0)
[20 0 0 0]
47 G
52 (47, 5, 5, 0)
[ 0 0 0 20]
ATCACCATGTAAGTCTGCCGGGCAGATTCAAATATTCAACCAAACTAGAGTTGTGCGGTCCTCGACAATTGTTTTCCTATGTACCT
idx 6 locidx 338
45 A
50 (45, 5, 5, 0)
[ 0 20 0 0]
76 T
81 (76, 5, 5, 0)
[ 0 0 20 0]
CCTGGTCAATAGCCCCCAATTGGTCGATCCCGTTTATACTTGCAGAACAAATCGTTATATACAAAGACGGATGTGGTGCGAAATAC
idx 6 locidx 339
69 A
74 (69, 5, 5, 0)
[ 0 21 0 0]
AGCCGACCGGATGATGGGTGGAGGGCTGGGTATCGCCTTAGCTCAACCGATGATGGGGAGTAGCAATCAAGCGAGATCAAACCGGC
idx 6 locidx 340
13 G
18 (13, 5, 5, 0)
[ 0 0 0 21]
37 G
42 (37, 5, 5, 0)
[ 0 0 0 21]
54 C
59 (54, 5, 5, 0)
[21 0 0 0]
83 T
88 (83, 5, 5, 0)
[ 0 0 21 0]
GTAGAAATGTTTCGCCGAGTCACGGTTTGAAGGGACGGTCCGGGTTCCCTAAACCCAGTTGGCTCCAAGCGAGAATGCAGCTGTAT
idx 6 locidx 341
6 C
11 (6, 5, 5, 0)
[17 0 0 0]
17 G
22 (17, 5, 5, 0)
[ 0 0 0 17]
51 A
56 (51, 5, 5, 0)
[ 0 17 0 0]
56 C
61 (56, 5, 5, 0)
[17 0 0 0]
58 A
63 (58, 5, 5, 0)
[ 0 17 0 0]
65 A
70 (65, 5, 5, 0)
[ 0 17 0 0]
80 C
85 (80, 5, 5, 0)
[17 0 0 0]
TTCAGACTCCTCGTCTGGATCCTGGTTGAGTTGTTCTAATCAGAGAATAGTACCTACAACATGCGACTAATAAAACAAATCGGCGA
idx 6 locidx 342
31 C
36 (31, 5, 5, 0)
[21 0 0 0]
39 C
44 (39, 5, 5, 0)
[21 0 0 0]
76 G
81 (76, 5, 5, 0)
[ 0 0 0 21]
CGGCGCGATTGTCTCCAATTCCTGACTTCCACTGCTGACCTTAGGAGCCCCTAGGACATAAAAACAAGTTCGTTCCGTGGCTTCAA
idx 6 locidx 343
2 G
7 (2, 5, 5, 0)
[ 0 0 0 22]
22 G
27 (22, 5, 5, 0)
[ 0 0 0 22]
80 T
85 (80, 5, 5, 0)
[ 0 0 22 0]
GCGTGTCGCACCGTTGGTAATAGTGCCGCCCCTGCCGAGCCTTTGGGAGAGTCGTAATAATAATACTGGTAACTTTCCCTTGAGTG
idx 6 locidx 344
9 T
14 (9, 5, 5, 0)
[ 0 0 20 0]
36 G
41 (36, 5, 5, 0)
[ 0 0 0 20]
56 T
61 (56, 5, 5, 0)
[ 0 0 20 0]
69 A
74 (69, 5, 5, 0)
[ 0 20 0 0]
76 W
81 (76, 5, 5, 0)
[ 0 9 11 0]
85 A
90 (85, 5, 5, 0)
[ 0 20 0 0]
TGCACTTCTTATGTGGAGCACTGTATAAGAATTCTCGGTGGAGTGCTCCCTTATACTACAATCCATCGAATTTAGTWCTGTAAGTA
idx 6 locidx 345
73 G
78 (73, 5, 5, 0)
[ 0 0 0 21]
83 G
88 (83, 5, 5, 0)
[ 0 0 0 21]
84 A
89 (84, 5, 5, 0)
[ 0 21 0 0]
85 C
90 (85, 5, 5, 0)
[21 0 0 0]
TTCTAGATGTGGGCGTCGACCATGCCAAATATACGTCTGCCAAAGAGCGCGCGGGCAAGTTGTTCACTTTGGGGATGCCATGCGAC
idx 6 locidx 346
1 T
6 (1, 5, 5, 0)
[ 0 0 24 0]
12 A
17 (12, 5, 5, 0)
[ 0 24 0 0]
50 G
55 (50, 5, 5, 0)
[ 0 0 0 24]
78 G
83 (78, 5, 5, 0)
[ 0 0 0 24]
CTAGCAGGAATGACCTGATCTCTAAGCAGAGATTTAGGAGAAAGACCACTGGATTCTGATGCAATTTTAGTGTTCCTGGTCGGCAC
idx 6 locidx 347
50 A
55 (50, 5, 5, 0)
[ 0 18 0 0]
64 C
69 (64, 5, 5, 0)
[17 0 1 0]
75 C
80 (75, 5, 5, 0)
[18 0 0 0]
77 C
82 (77, 5, 5, 0)
[18 0 0 0]
AGTGCATTATGAATGTTCGCACCAAACGCCCTGATGCTTGCGAGTTTTTTATGTTAGGCCACAGCAGCGTGGGGCCACATTTCTGG
idx 6 locidx 348
26 G
31 (26, 5, 5, 0)
[ 0 0 0 23]
29 A
34 (29, 5, 5, 0)
[ 0 23 0 0]
39 A
44 (39, 5, 5, 0)
[ 0 23 0 0]
69 A
74 (69, 5, 5, 0)
[ 0 23 0 0]
CAACGATGAGTGTGGTGTATCCCCACGGAAATTCCACGGACTTCCTTGACCGCAGAGGAGTGCAAGATGAGCCTGTAAGCGCAAAT
idx 6 locidx 349
35 T
40 (35, 5, 5, 0)
[ 0 0 22 0]
60 T
65 (60, 5, 5, 0)
[ 0 0 22 0]
TACCGTGATGTAAATACAAAATCGAGAGCTTTAATTCATTGCAGTTAGGGCGGGTGCGCATTGCACCAACCGGTTCGTGGTTTAAT
idx 7 locidx 350
17 T
22 (17, 5, 5, 0)
[ 0 0 23 0]
34 A
39 (34, 5, 5, 0)
[ 0 23 0 0]
39 A
44 (39, 5, 5, 0)
[ 0 23 0 0]
53 C
58 (53, 5, 5, 0)
[23 0 0 0]
75 C
80 (75, 5, 5, 0)
[23 0 0 0]
85 G
90 (85, 5, 5, 0)
[ 0 0 0 23]
CAGGTGATTAGGGAAGCTCCCTCGCATCGGAATAAACCGATATCAAAGGGAGACAGAGTCCCTCATGCCGAGCGACTAACGGTATG
idx 7 locidx 351
26 G
31 (26, 5, 5, 0)
[ 0 0 0 18]
29 C
34 (29, 5, 5, 0)
[18 0 0 0]
65 C
70 (65, 5, 5, 0)
[18 0 0 0]
80 G
85 (80, 5, 5, 0)
[ 0 0 0 18]
GTCGTCAATAGCTGAGACCTAAATTGGTGCAGTTTATTATAGGATTCTCAAGGTAGTTTCTACCGCATCCCCGCTCAAGGGATTCT
idx 7 locidx 352
16 T
21 (16, 5, 5, 0)
[ 0 0 22 0]
79 A
84 (79, 5, 5, 0)
[ 0 22 0 0]
80 T
85 (80, 5, 5, 0)
[ 0 0 22 0]
ACATAGGTGTATGTCTTGATCGACAAGCTCGGGCGCGATGGGAGCTATGTAAGACACCCTAGTTGTTGCTCGTGATAAGATGCAAA
idx 7 locidx 353
16 G
21 (16, 5, 5, 0)
[ 0 0 0 15]
21 T
26 (21, 5, 5, 0)
[ 0 0 15 0]
36 C
41 (36, 5, 5, 0)
[15 0 0 0]
52 C
57 (52, 5, 5, 0)
[15 0 0 0]
53 T
58 (53, 5, 5, 0)
[ 0 0 15 0]
71 C
76 (71, 5, 5, 0)
[15 0 0 0]
CACGCGGCTGATTCTCGGTAATGGCCCGTGGGGCCACTGTCACACACACGACCTATCAACTGACCAATAGTCCTAAAGAGTAGACG
idx 7 locidx 354
7 G
12 (7, 5, 5, 0)
[ 0 0 0 17]
23 C
28 (23, 5, 5, 0)
[17 0 0 0]
28 C
33 (28, 5, 5, 0)
[17 0 0 0]
73 T
78 (73, 5, 5, 0)
[ 0 0 17 0]
74 T
79 (74, 5, 5, 0)
[ 0 0 17 0]
AGTGGATGATATTTTCAGCGTGCCATTACGTCGCGAGCACCTTAGACGGTCGCCAGGCAGTGTCTTTGGATCATTAGGAGTATAAC
idx 7 locidx 355
48 C
53 (48, 5, 5, 0)
[18 0 0 0]
57 T
62 (57, 5, 5, 0)
[ 0 0 18 0]
67 T
72 (67, 5, 5, 0)
[ 0 0 18 0]
82 C
87 (82, 5, 5, 0)
[18 0 0 0]
84 T
89 (84, 5, 5, 0)
[ 0 0 18 0]
CGCTGTATTAAAAGGGGGATCTATTAACAGCCCTCTATATGAGTAGCTCTCTTGGGTTTGAATTAGTTTTAGGAATGACGTACGTA
idx 7 locidx 356
35 A
40 (35, 5, 5, 0)
[ 0 21 0 0]
38 T
43 (38, 5, 5, 0)
[ 0 0 21 0]
64 C
69 (64, 5, 5, 0)
[21 0 0 0]
71 A
76 (71, 5, 5, 0)
[ 0 21 0 0]
CATGGTAGTCTATGGGCCAGCTATTAACTCGTTGAAACTCGATTCACAGGCGCTGAAGTCGATTCATATCAACTCCGGTCGGGTAT
idx 7 locidx 357
18 A
23 (18, 5, 5, 0)
[ 0 19 0 0]
22 A
27 (22, 5, 5, 0)
[ 0 19 0 0]
31 A
36 (31, 5, 5, 0)
[ 0 19 0 0]
57 C
62 (57, 5, 5, 0)
[19 0 0 0]
GGTGCCTTACGACCGGATACAAATCACCGCAAGAGATTCCACAAGTCACTCACTTTTCGGGGGGGAATATTTGAACATATGTGGAC
idx 7 locidx 358
3 C
8 (3, 5, 5, 0)
[16 0 0 0]
7 G
12 (7, 5, 5, 0)
[ 0 0 0 16]
16 C
21 (16, 5, 5, 0)
[16 0 0 0]
26 A
31 (26, 5, 5, 0)
[ 0 16 0 0]
29 G
34 (29, 5, 5, 0)
[ 0 0 0 16]
53 S
58 (53, 5, 5, 0)
[ 5 0 0 11]
60 T
65 (60, 5, 5, 0)
[ 0 0 16 0]
79 T
84 (79, 5, 5, 0)
[ 0 0 16 0]
AGTCCTAGGTAGAAGGCGGACAAACGAAAGGTATGTCAGCCTAGCTTACCTTASAGGATTTTACAGTTCTGGTATCATCTTCTATT
idx 7 locidx 359
35 A
40 (35, 5, 5, 0)
[ 0 18 0 0]
40 G
45 (40, 5, 5, 0)
[ 0 0 0 18]
41 T
46 (41, 5, 5, 0)
[ 0 0 18 0]
70 C
74 (70, 5, 5, 1)
[18 0 0 0]
74 G
78 (74, 5, 5, 1)
[ 0 0 0 18]
GGAATCTGATCATTGTGAAATTCGAGCTGAAAGCTAGTAGGTGGCCTACT-TCCTTATGTGAGCCGTGATCAAAGAC-ATGAACGG
idx 7 locidx 360
34 G
39 (34, 5, 5, 0)
[ 0 0 0 20]
56 G
61 (56, 5, 5, 0)
[ 0 0 0 20]
TAGAAGATCGGTATATGCATACGGAGGCTATTTAGAAAGTCTGTTAAGTGCTACAGGCTCACCCTGTATACAGCATCATTCTCGAC
idx 7 locidx 361
4 T
9 (4, 5, 5, 0)
[ 0 0 22 0]
36 G
41 (36, 5, 5, 0)
[ 0 0 0 22]
57 G
62 (57, 5, 5, 0)
[ 0 0 0 22]
74 T
79 (74, 5, 5, 0)
[ 0 0 22 0]
ATATTAGAGGGGTGGATCCTCCACTCCACAAAGCTCGCCAGGCGTTCAGCACTTCTAGGCTCTGTGGAGAACCCTTGATCCCTTAG
idx 7 locidx 362
12 A
17 (12, 5, 5, 0)
[ 0 21 0 0]
23 G
28 (23, 5, 5, 0)
[ 0 0 0 21]
79 G
84 (79, 5, 5, 0)
[ 0 0 0 21]
AACTTAAGCGGAAGGAGGTCGTAGTACGACATTCGGATTGTATTGTGGTCCCGAACTTAAAAGCCCGGTAATACGAAGGGAAACGT
idx 7 locidx 363
0 T
5 (0, 5, 5, 0)
[ 0 0 22 0]
1 A
6 (1, 5, 5, 0)
[ 0 22 0 0]
50 C
55 (50, 5, 5, 0)
[22 0 0 0]
TACATTGGGATCTGACGGGGAGAAGTACTTCGGTACCGACTTTGAACGGCCGTGACTAATATCTATTAATTCACGGCTATTCCGCT
idx 7 locidx 364
55 C
60 (55, 5, 5, 0)
[17 0 0 0]
71 T
76 (71, 5, 5, 0)
[ 0 0 17 0]
GATGGTGCGTCCCGAAGTGGTGTCTTAACTGAGTGACAATCTGCCGGATTTAGATCCAATTTGCGGATTGGTAGCGAGTCCCCGGA
idx 7 locidx 365
10 C
15 (10, 5, 5, 0)
[17 0 0 0]
11 T
16 (11, 5, 5, 0)
[ 0 0 17 0]
13 A
18 (13, 5, 5, 0)
[ 0 17 0 0]
17 T
22 (17, 5, 5, 0)
[ 0 0 17 0]
21 T
26 (21, 5, 5, 0)
[ 0 0 17 0]
82 G
87 (82, 5, 5, 0)
[ 0 0 0 17]
TGTATATGCCCTAACGTTGTATATAGGTCTAACTATTGTAAGGACGACGGCGTGCAATAAGTTGTTATGTTTTGGGTTCACGGTAT
idx 7 locidx 366
4 T
9 (4, 5, 5, 0)
[ 0 0 25 0]
34 W
39 (34, 5, 5, 0)
[ 0 13 12 0]
AGCATTAAGACGCATCCGCATGTCCGGGTCCAATWGTGAGGGCGAGAGGATACGATAAATATTTACGCCGGAACTCGGTTCATAAA
idx 7 locidx 367
44 A
49 (44, 5, 5, 0)
[ 0 24 0 0]
64 A
69 (64, 5, 5, 0)
[ 0 24 0 0]
70 G
75 (70, 5, 5, 0)
[ 0 0 0 24]
TGATGCACAAACTGACGTAGTGCTTCGTGACGTGATCCGTTTCGACCAAGAAGCATTGTTTATCATTTCCGGTTGAAAATAGATAC-
idx 7 locidx 368
7 S
12 (7, 5, 5, 0)
[10 0 0 10]
29 G
34 (29, 5, 5, 0)
[ 0 0 0 20]
65 A
70 (65, 5, 5, 0)
[ 0 20 0 0]
CTATATCSAATGATGTTACTGAAATAGACGTGAGAGATCCGGCTCCAACCCTATTGGATGGCGTTATGCATCTTGATATATATACG
idx 7 locidx 369
6 A
11 (6, 5, 5, 0)
[ 0 20 0 0]
53 C
58 (53, 5, 5, 0)
[20 0 0 0]
63 T
68 (63, 5, 5, 0)
[ 0 0 20 0]
71 C
76 (71, 5, 5, 0)
[20 0 0 0]
76 T
81 (76, 5, 5, 0)
[ 0 0 20 0]
TTCTCTATATATTCACCAGGACACCCAGCCATCCTACAACGAACGTCTACTAGCCGTTAATCGTAACCCTTCCATTTCGCGTCTTA-
idx 7 locidx 370
6 A
11 (6, 5, 5, 0)
[ 0 23 0 0]
21 G
26 (21, 5, 5, 0)
[ 0 0 0 23]
35 G
40 (35, 5, 5, 0)
[ 0 0 0 23]
48 G
53 (48, 5, 5, 0)
[ 0 0 0 23]
51 G
56 (51, 5, 5, 0)
[ 0 0 0 23]
79 A
84 (79, 5, 5, 0)
[ 0 23 0 0]
82 G
87 (82, 5, 5, 0)
[ 0 0 0 23]
85 T
90 (85, 5, 5, 0)
[ 0 0 23 0]
CGTAGTAGGTGCGAGCCCTCGGACAGCCTCGCATGGACCTGCCTAGCCGATGGTCTCCGCCCCCTAGCACGGCCGGGTGAATGGAT
idx 7 locidx 371
21 T
26 (21, 5, 5, 0)
[ 0 0 21 0]
48 C
53 (48, 5, 5, 0)
[21 0 0 0]
76 C
81 (76, 5, 5, 0)
[21 0 0 0]
CTCCCGCCTTAGTTGAGCGACTGTTTTGCTAGAGGTTCTCCAGACAACCTTTCCACGGCACGAAAGGCTAAGCGGGCGCTTCATGA
idx 7 locidx 372
34 T
39 (34, 5, 5, 0)
[ 0 0 21 0]
37 C
42 (37, 5, 5, 0)
[21 0 0 0]
56 C
61 (56, 5, 5, 0)
[21 0 0 0]
GCAACCGCCCTGGCGATTAGTAGTGGACATGATGTGCCCACAGTCAGCGTTCTTGCCCTGCCCTTGTAACGGGGTGTGGGCAACCA
idx 7 locidx 373
31 G
36 (31, 5, 5, 0)
[ 0 0 0 22]
61 G
66 (61, 5, 5, 0)
[ 0 0 0 22]
80 C
85 (80, 5, 5, 0)
[22 0 0 0]
CGACGGAATTCATCATTCTGCCGGTATCGTAGCCCGAGCATCTGGTCGGACTTGAGTGTTAGATGCAGTGTCGATAGCCGCCGTAA
idx 7 locidx 374
11 A
16 (11, 5, 5, 0)
[ 0 19 0 0]
18 T
23 (18, 5, 5, 0)
[ 0 0 19 0]
71 C
76 (71, 5, 5, 0)
[19 0 0 0]
74 G
79 (74, 5, 5, 0)
[ 0 0 0 19]
76 G
81 (76, 5, 5, 0)
[ 0 0 0 19]
81 A
86 (81, 5, 5, 0)
[ 0 19 0 0]
CGCGATCTGATACCCTCGTGTGGAGCACGATGAAAAGAAACACCATCTAATACCAGAATGGCAAAGGCGCCCCAGAGCTAAATAGT
idx 7 locidx 375
0 T
5 (0, 5, 5, 0)
[ 0 0 20 0]
9 G
14 (9, 5, 5, 0)
[ 0 0 0 20]
11 T
16 (11, 5, 5, 0)
[ 0 0 20 0]
26 S
31 (26, 5, 5, 0)
[10 0 0 10]
63 G
68 (63, 5, 5, 0)
[ 0 0 0 20]
TGTGAACGTGTTGGGATGACGGTAACSCTCGAGTGTTGTGGGGATTGAAGAGCCGCGCTACTGGGATGGCGTACATCCTATCACTA
idx 7 locidx 376
9 T
14 (9, 5, 5, 0)
[ 0 0 17 0]
16 G
21 (16, 5, 5, 0)
[ 0 0 0 17]
38 G
43 (38, 5, 5, 0)
[ 0 0 0 17]
49 T
54 (49, 5, 5, 0)
[ 0 0 17 0]
67 C
72 (67, 5, 5, 0)
[17 0 0 0]
AAGCTCGAGTAGCGTAGTAGAAGCGTAATAACGCTCAAGACTACCTACATTCAAATAGACACTGAGGCATATGAAGGTAGTCTCGG
idx 7 locidx 377
5 G
10 (5, 5, 5, 0)
[ 0 0 0 18]
11 C
16 (11, 5, 5, 0)
[18 0 0 0]
43 G
48 (43, 5, 5, 0)
[ 0 0 0 18]
45 T
50 (45, 5, 5, 0)
[ 0 0 18 0]
71 A
76 (71, 5, 5, 0)
[ 0 18 0 0]
75 R
80 (75, 5, 5, 0)
[0 9 0 9]
AACACGTCCTCCAGACGGTACTAAGTGACGTCATGCTCCGTGTGATGGTGTCTCGCGCTCTTACCATTGGAATCGRGTATGGTCGT
idx 7 locidx 378
2 T
7 (2, 5, 5, 0)
[ 0 0 29 0]
12 T
17 (12, 5, 5, 0)
[ 0 0 29 0]
14 T
19 (14, 5, 5, 0)
[ 0 0 29 0]
ATTGAACGGGTATCTAGACCGAGTTAGTTTCATCAGTGGGAAATATGCGCTAGGTCGGCGTTGCCATGGATTAGACGCGACGAAGT
idx 7 locidx 379
9 G
14 (9, 5, 5, 0)
[ 0 0 0 22]
38 A
43 (38, 5, 5, 0)
[ 0 22 0 0]
45 T
50 (45, 5, 5, 0)
[ 0 0 22 0]
46 G
51 (46, 5, 5, 0)
[ 0 0 0 22]
67 C
72 (67, 5, 5, 0)
[22 0 0 0]
AAATGGCCGGAGCGCTTATCTCTCGATATCAAATCGGGATTCCGGTGAAAAACTGTCAGGTTACCGTCCGGGCCCGCTTTCAGTCT
idx 7 locidx 380
51 G
56 (51, 5, 5, 0)
[ 0 0 0 18]
61 M
66 (61, 5, 5, 0)
[ 8 10 0 0]
84 A
89 (84, 5, 5, 0)
[ 0 18 0 0]
CCTACAGCTCTAAAGCCATCGGATGACTCTTAGGGTGCGCGATACGGTTACGCAAGTGGACMAATGATCCACGTATCATTCCCTAA
idx 7 locidx 381
15 G
20 (15, 5, 5, 0)
[ 0 0 0 18]
18 A
23 (18, 5, 5, 0)
[ 0 18 0 0]
71 C
76 (71, 5, 5, 0)
[18 0 0 0]
72 A
77 (72, 5, 5, 0)
[ 0 18 0 0]
77 T
82 (77, 5, 5, 0)
[ 0 0 18 0]
TAATTGTTAAGACTTGGAAGCGTAGGGAGACACCTCCCTAGTGGAAGGTGGCGCTACCTCAGGAGCCATATCAGGCATGGGTTGCG
idx 7 locidx 382
7 T
12 (7, 5, 5, 0)
[ 0 0 17 0]
26 G
31 (26, 5, 5, 0)
[ 0 0 0 17]
55 C
60 (55, 5, 5, 0)
[17 0 0 0]
58 G
63 (58, 5, 5, 0)
[ 0 0 0 17]
ACCATAATGGCATGGTGCCACAGCTAGGGACCGATCTCTTTCTAAACTACATCCCCTAGGTTGAGACCCATGCGTGCTCTAATTGG
idx 7 locidx 383
3 A
8 (3, 5, 5, 0)
[ 0 20 0 0]
41 C
46 (41, 5, 5, 0)
[20 0 0 0]
55 T
60 (55, 5, 5, 0)
[ 0 0 20 0]
78 C
83 (78, 5, 5, 0)
[20 0 0 0]
GCGATATTGTATATCAATGGATAGAACTCCACATCCCCCCGCCCGCCGTTAGGCCTATTTTGGTGGGAAGACACTCTTCCCAGGCA
idx 7 locidx 384
10 A
15 (10, 5, 5, 0)
[ 0 22 0 0]
26 A
31 (26, 5, 5, 0)
[ 0 22 0 0]
31 T
36 (31, 5, 5, 0)
[ 0 0 22 0]
45 T
50 (45, 5, 5, 0)
[ 0 0 22 0]
59 G
64 (59, 5, 5, 0)
[ 0 0 0 22]
75 C
80 (75, 5, 5, 0)
[22 0 0 0]
80 G
85 (80, 5, 5, 0)
[ 0 0 0 22]
ACACCAGTTGAGACCGGATAGCACATACGTGTGCCACACTGCGATTGAGGCACGTTTGAGGGCGTCTTTAACGCTCTTCCGACCCG
idx 7 locidx 385
5 C
10 (5, 5, 5, 0)
[21 0 0 0]
17 C
22 (17, 5, 5, 0)
[21 0 0 0]
18 C
23 (18, 5, 5, 0)
[21 0 0 0]
38 T
43 (38, 5, 5, 0)
[ 0 0 21 0]
68 C
73 (68, 5, 5, 0)
[21 0 0 0]
76 T
81 (76, 5, 5, 0)
[ 0 0 21 0]
GGTTTCTTTCTAAAGACCCACACCATGTCCACGGTCTATACAAGCCCGGTTCCGATTGGACGCTACCTCACATGAATCTAGCGGCT
idx 7 locidx 386
10 A
15 (10, 5, 5, 0)
[ 0 19 0 0]
25 A
30 (25, 5, 5, 0)
[ 0 19 0 0]
63 C
68 (63, 5, 5, 0)
[19 0 0 0]
65 G
70 (65, 5, 5, 0)
[ 0 0 0 19]
75 C
80 (75, 5, 5, 0)
[19 0 0 0]
CCCAAGGAGTACAACATCTAGCTATAGATGAAACCAATTGGAGTTTGGTCCGTCGGCAGGTCACCGGATACCTGTCCGTTCGATCT
idx 7 locidx 387
20 G
25 (20, 5, 5, 0)
[ 0 0 0 17]
50 G
55 (50, 5, 5, 0)
[ 0 0 0 17]
GGACCTCCCCACGCGTTTTGGTAAGATCAGGTTCAGTCAGAATTTGCCCAGGTGGAGTAGCGCCCGCATCAGTTCGTGCGATATGT
idx 7 locidx 388
9 G
14 (9, 5, 5, 0)
[ 0 0 0 18]
41 G
46 (41, 5, 5, 0)
[ 0 0 0 18]
46 C
51 (46, 5, 5, 0)
[18 0 0 0]
61 C
66 (61, 5, 5, 0)
[18 0 0 0]
TACACAGAAGCAAAATGGGCTACACTGCACCTCTGGATCAAGCTTGCCCAATGACTGGTGTCACATTTCGAAAGGCTGCAATAGAC
idx 7 locidx 389
17 G
22 (17, 5, 5, 0)
[ 0 0 0 16]
33 G
38 (33, 5, 5, 0)
[ 0 0 0 16]
63 A
68 (63, 5, 5, 0)
[ 0 16 0 0]
85 G
90 (85, 5, 5, 0)
[ 0 0 0 16]
TCTGTTTCTGATGCTATGTTTGGCCTCTGGATAGACGTGCAGCCCGCGAGGTAGAAACCCAGGACCACGTGGTGTGAAACTGCACG
NOT HERE
idx 7 locidx 391
46 G
51 (46, 5, 5, 0)
[ 0 0 0 18]
50 A
55 (50, 5, 5, 0)
[ 0 18 0 0]
68 G
73 (68, 5, 5, 0)
[ 0 0 0 18]
CCACCGTCGCTGGTAAATCAGATCGGTCGGCATCGCACATCCCGTGGACAAACGCGAAGCCCGAGAGGGCCCGAATTTGCGCACGC
idx 7 locidx 392
15 G
20 (15, 5, 5, 0)
[ 0 0 0 22]
21 G
26 (21, 5, 5, 0)
[ 0 0 0 22]
26 T
31 (26, 5, 5, 0)
[ 0 0 22 0]
36 A
41 (36, 5, 5, 0)
[ 0 22 0 0]
45 T
50 (45, 5, 5, 0)
[ 0 0 22 0]
56 G
61 (56, 5, 5, 0)
[ 0 0 0 22]
GCTAAATCCATTGCAGAGTTGGCGTGTCCTTTTCCAATTTCATATTTGGAGGCGCAGCTTGTCCTTACGCGCATTGGACGCCGATG
idx 7 locidx 393
0 T
5 (0, 5, 5, 0)
[ 0 0 22 0]
10 A
15 (10, 5, 5, 0)
[ 0 22 0 0]
35 G
40 (35, 5, 5, 0)
[ 0 0 0 22]
63 T
68 (63, 5, 5, 0)
[ 0 0 22 0]
69 A
74 (69, 5, 5, 0)
[ 0 22 0 0]
TAAGCGGGAGAACCCTCGGTGGTCCGCTTATGCCTGGTTTTGCTGTTGAATCTATGTGTTTCCTCCTATAGATTTGACTGATCGGT
idx 7 locidx 394
82 T
87 (82, 5, 5, 0)
[ 0 0 19 0]
GAAGACCGTCACGTCGGGCCCATCAGCGAGACACGCGCTTCCGAGAACTCCAGGTTCTCGGAGCATTGCCACGGCGAAATTCTTGG
idx 7 locidx 395
22 A
27 (22, 5, 5, 0)
[ 0 14 0 0]
55 T
60 (55, 5, 5, 0)
[ 0 0 14 0]
56 C
61 (56, 5, 5, 0)
[14 0 0 0]
64 A
69 (64, 5, 5, 0)
[ 0 14 0 0]
TTGGGATGGCGATGCCGTACATAGGCGCATCCAGCCTCGGTCATTGTCGGAGATCTCACCTTTCAACGGTTGACGATGACAAGTGG
idx 7 locidx 396
37 G
42 (37, 5, 5, 0)
[ 0 0 0 19]
56 A
61 (56, 5, 5, 0)
[ 0 19 0 0]
59 T
64 (59, 5, 5, 0)
[ 0 0 19 0]
TGGCGATGAGCCACAGCCCTTCTAGGCGGTCGAGGAGGTGACAACTTTTCCGTTATAACTCAGACCTGCCGTAGCACTGGAAGAAA
idx 7 locidx 397
10 T
15 (10, 5, 5, 0)
[ 0 0 20 0]
13 G
18 (13, 5, 5, 0)
[ 0 0 0 20]
14 C
19 (14, 5, 5, 0)
[20 0 0 0]
38 C
43 (38, 5, 5, 0)
[20 0 0 0]
68 G
73 (68, 5, 5, 0)
[ 0 0 0 20]
ACTAGCCGTTTGAGCGAATTTTATCTGATAAGCAGGTCCCGCAGGATTCTCCCGCCCTGGTCTCGCGAGTCCACCTGAGTGGAGAC
idx 7 locidx 398
5 G
10 (5, 5, 5, 0)
[ 0 0 0 22]
30 A
35 (30, 5, 5, 0)
[ 0 22 0 0]
56 G
61 (56, 5, 5, 0)
[ 0 0 0 22]
GCGAAGCCCAGCATGTAGTAGGCACTCCGGACGCGACCGGTTGTAATCTAGGACGCGTGAAATGGGCAATTATGGCCTGCCTCCGT
idx 7 locidx 399
38 C
43 (38, 5, 5, 0)
[19 0 0 0]
GTGATACCGCTGCGGACGCCACCAGCAAACGACGGTACCGGTTACGACGTGTTCTCTGAAAAGGGATGATTGGAGGAACCTGAAGA
idx 8 locidx 400
24 T
29 (24, 5, 5, 0)
[ 0 0 23 0]
38 T
43 (38, 5, 5, 0)
[ 0 0 23 0]
42 G
47 (42, 5, 5, 0)
[ 0 0 0 23]
43 T
48 (43, 5, 5, 0)
[ 0 0 23 0]
52 C
57 (52, 5, 5, 0)
[23 0 0 0]
69 G
74 (69, 5, 5, 0)
[ 0 0 0 23]
75 G
80 (75, 5, 5, 0)
[ 0 0 0 23]
GGTAGGCGAAAAGGTAAGCCCGCATACCTCTCAGCTGATCTTGTCTTTGGGTCCAATGCAGTAAGCTCAGTGGTCGTCCGAGAGGA
idx 8 locidx 401
37 A
42 (37, 5, 5, 0)
[ 0 16 0 0]
47 C
52 (47, 5, 5, 0)
[16 0 0 0]
53 C
58 (53, 5, 5, 0)
[16 0 0 0]
79 T
84 (79, 5, 5, 0)
[ 0 0 16 0]
GTTAGAGCGGCAACATCAGCGAGTGCAGCCCCGGGCGAGCGCGTTCGCCGTGCCGTGGCCTCAGCCGGATGGGTCAAGATTTCTCC
idx 8 locidx 402
13 M
18 (13, 5, 5, 0)
[10 9 0 0]
40 C
45 (40, 5, 5, 0)
[19 0 0 0]
79 G
84 (79, 5, 5, 0)
[ 0 0 0 19]
84 G
89 (84, 5, 5, 0)
[ 0 0 0 19]
ACGCTTAGCCTTCMTGGGAGGCCTGAACTGGCCATTACGGCCAGTGAAAGATATAGCGCACCAGGCGTCCACGCACGCTGCCTGG-A
idx 8 locidx 403
8 C
13 (8, 5, 5, 0)
[18 0 0 0]
9 T
14 (9, 5, 5, 0)
[ 0 0 18 0]
11 T
16 (11, 5, 5, 0)
[ 0 0 18 0]
26 A
31 (26, 5, 5, 0)
[ 0 18 0 0]
54 C
59 (54, 5, 5, 0)
[18 0 0 0]
AATGCGAACTCTCGAAAAGCCCTCAAAACCCCAAGCATTGATAAAGCCCATTTCCCCCCTTCAGGGATTACAAAAAAGTTCGAACT
idx 8 locidx 404
2 C
7 (2, 5, 5, 0)
[22 0 0 0]
TTCCGTCCTGAAATAATATGTCCTTCCATAGAATTTAAGTGTTGCTGGAAAACTGACGAAATCCTTGTTAACACAGGCGTCAGAAT
idx 8 locidx 405
11 G
16 (11, 5, 5, 0)
[ 0 0 0 23]
17 T
22 (17, 5, 5, 0)
[ 0 0 23 0]
21 C
26 (21, 5, 5, 0)
[23 0 0 0]
24 A
29 (24, 5, 5, 0)
[ 0 23 0 0]
27 C
32 (27, 5, 5, 0)
[23 0 0 0]
55 G
60 (55, 5, 5, 0)
[ 0 0 0 23]
CTCCTTTGCATGCTCCCTAGCCGAAAGCTAACCTCTCTATCTTACCCCATTCTACGTAGAGACAATTGAAATCACAACAACGTATG
idx 8 locidx 406
0 T
5 (0, 5, 5, 0)
[ 0 0 23 0]
37 A
42 (37, 5, 5, 0)
[ 0 23 0 0]
64 C
69 (64, 5, 5, 0)
[23 0 0 0]
TCAGATTTGTCGGCGGGTGATCCCTAGATCGGGTTACAGTATGGTACCTAATTCCACATCCAAACACTTAGGACTATTAATCAATG
idx 8 locidx 407
22 G
27 (22, 5, 5, 0)
[ 0 0 0 20]
36 A
41 (36, 5, 5, 0)
[ 0 20 0 0]
50 G
55 (50, 5, 5, 0)
[ 0 0 0 20]
56 C
61 (56, 5, 5, 0)
[20 0 0 0]
AAACCGTTGCTGACGGCCGCCCGCCCGAACATCATCAAAACGTGGTATTCGCATGGCCGAGCCCAGTAAGCCGCCTACGTCTAGCT
idx 8 locidx 408
18 T
23 (18, 5, 5, 0)
[ 0 0 23 0]
28 T
33 (28, 5, 5, 0)
[ 0 0 23 0]
46 G
51 (46, 5, 5, 0)
[ 0 0 0 23]
57 T
62 (57, 5, 5, 0)
[ 0 0 23 0]
73 A
78 (73, 5, 5, 0)
[ 1 22 0 0]
TACCAAACAATGTACCACTAGGACACCTTGCGCTAGTGGTCCTCAAGTGCGGAGGCGTTCTCTAGAATGGTACAGATGTCGACACC
idx 8 locidx 409
6 G
11 (6, 5, 5, 0)
[ 0 0 0 26]
23 G
28 (23, 5, 5, 0)
[ 0 0 0 26]
46 G
51 (46, 5, 5, 0)
[ 0 0 0 26]
60 G
65 (60, 5, 5, 0)
[ 0 0 0 26]
75 T
80 (75, 5, 5, 0)
[ 0 0 26 0]
76 C
81 (76, 5, 5, 0)
[26 0 0 0]
77 T
82 (77, 5, 5, 0)
[ 0 0 26 0]
82 G
87 (82, 5, 5, 0)
[ 0 0 0 26]
CATTAGGCTAAAAGTGTTACCTTGCGCGCTGGGTAGTGCAACACTAGTACAGCTGTGGCAGATATAACGGCATTGTCTCCGGGTCA
idx 8 locidx 410
35 C
40 (35, 5, 5, 0)
[21 0 0 0]
36 C
41 (36, 5, 5, 0)
[21 0 0 0]
48 G
53 (48, 5, 5, 0)
[ 0 0 0 21]
66 T
71 (66, 5, 5, 0)
[ 0 0 21 0]
71 G
76 (71, 5, 5, 0)
[ 0 0 0 21]
82 A
87 (82, 5, 5, 0)
[ 0 21 0 0]
GAGCGTAACGTTAGCATTGATTTACTCCTAGTGCACCTAGTCCCCTAGGGATCACCCGCGATGCAGTTCTTGAGGCGGGTGGACCA
idx 8 locidx 411
14 C
19 (14, 5, 5, 0)
[22 0 0 0]
17 A
22 (17, 5, 5, 0)
[ 0 22 0 0]
19 C
24 (19, 5, 5, 0)
[22 0 0 0]
48 G
53 (48, 5, 5, 0)
[ 0 0 0 22]
82 C
87 (82, 5, 5, 0)
[22 0 0 0]
AATTACTGGTGATCCGTAGCAAGAACTGCCCACTAGCAATACCCCTAGGACCCAGCACGGGTTGTTACTCCTGGTGACCAGTCCGC
idx 8 locidx 412
0 A
5 (0, 5, 5, 0)
[ 0 21 0 0]
52 T
57 (52, 5, 5, 0)
[ 0 0 21 0]
57 G
62 (57, 5, 5, 0)
[ 0 0 0 21]
62 A
67 (62, 5, 5, 0)
[ 0 21 0 0]
71 A
76 (71, 5, 5, 0)
[ 0 21 0 0]
80 C
85 (80, 5, 5, 0)
[21 0 0 0]
84 T
89 (84, 5, 5, 0)
[ 0 0 21 0]
ACTAGGCACCGATCAAGTGTGCTGGAGCGAGTGATAGCTTGTATCATAAAAGTGTATGCGCTACACCGATGAAGAATGAGCGCCTA
idx 8 locidx 413
8 T
13 (8, 5, 5, 0)
[ 0 0 20 0]
10 G
15 (10, 5, 5, 0)
[ 0 0 0 20]
16 G
21 (16, 5, 5, 0)
[ 0 0 0 20]
22 R
27 (22, 5, 5, 0)
[ 0 8 0 12]
64 C
69 (64, 5, 5, 0)
[20 0 0 0]
82 C
87 (82, 5, 5, 0)
[20 0 0 0]
85 A
90 (85, 5, 5, 0)
[ 0 20 0 0]
TAATATGTTGGTTCAGGTTCTCRACTACGTGATGACTGACCGCTATATCTCTGTGCGAGGAAACCCATTCATAAAGGTGATGCCAA
idx 8 locidx 414
15 G
20 (15, 5, 5, 0)
[ 0 0 0 17]
26 A
31 (26, 5, 5, 0)
[ 0 17 0 0]
28 C
33 (28, 5, 5, 0)
[17 0 0 0]
45 G
50 (45, 5, 5, 0)
[ 0 0 0 17]
76 G
81 (76, 5, 5, 0)
[ 0 0 0 17]
GAGCGGTGCTACGTCGTGATGCCTTCACCCTCAATGTTAATAGCAGGTCAGGGCCTAATTTGATAATGACTAACCTGTAAACCTAC---
idx 8 locidx 415
6 C
11 (6, 5, 5, 0)
[19 0 0 0]
21 A
26 (21, 5, 5, 0)
[ 0 19 0 0]
CTCTAGCACATTCGATCGGATACCCCACCTTCCCTGGATTAGCGAAGTTGGGTCTCGGTGATAGACGTCATCCAAGGTGATCCGGG
idx 8 locidx 416
13 K
18 (13, 5, 5, 0)
[ 0 0 13 7]
32 C
37 (32, 5, 5, 0)
[20 0 0 0]
83 C
88 (83, 5, 5, 0)
[20 0 0 0]
ACGTTAAGGTATGKACCGCCCCACACCTGACGCGCGCGTATGGCACCCAAACGCTGGCACTCACCCAATCGGTCGAAATTCTCCGT
idx 8 locidx 417
64 W
69 (64, 5, 5, 0)
[ 0 9 12 0]
TAACGGATAGATGCGGTGTTTAGCGGCTTTGTATGCGAGATTCTGCGCGTACTACTTGTAAATCWGCTTCTGAAATTGGTCTTATC
idx 8 locidx 418
44 C
49 (44, 5, 5, 0)
[19 0 0 0]
CGAGCAGACTGCGTCTCGGTAGCATCGAAGCCAATCGTTTGAAGCCTAAGTTAGGAAATCGGGGCACAACGTAGATACCTATTTTA
idx 8 locidx 419
5 T
10 (5, 5, 5, 0)
[ 0 0 17 0]
49 C
54 (49, 5, 5, 0)
[17 0 0 0]
55 T
60 (55, 5, 5, 0)
[ 0 0 17 0]
60 C
65 (60, 5, 5, 0)
[17 0 0 0]
69 A
74 (69, 5, 5, 0)
[ 0 17 0 0]
73 T
78 (73, 5, 5, 0)
[ 0 0 17 0]
80 T
85 (80, 5, 5, 0)
[ 0 0 17 0]
GTCTTTACGTCCCATTACGTCCACGTCAGAGTAGCTCAGAAGAAGCTTCCCACGTTGTTGCTACAATGCACATTATTCCGTCCCCA
idx 8 locidx 420
0 T
5 (0, 5, 5, 0)
[ 0 0 16 0]
45 A
50 (45, 5, 5, 0)
[ 0 16 0 0]
51 C
56 (51, 5, 5, 0)
[16 0 0 0]
68 A
73 (68, 5, 5, 0)
[ 0 16 0 0]
70 A
75 (70, 5, 5, 0)
[ 0 16 0 0]
82 T
87 (82, 5, 5, 0)
[ 0 0 16 0]
TACGTATACGGCATAGAAGATCGTGGGCTCATGGTGGTGTAAATAAAACGGCCTCGCTCGCTGGCGAAACATAGTTGGAGTCTACC
idx 8 locidx 421
15 C
20 (15, 5, 5, 0)
[16 0 0 0]
55 G
60 (55, 5, 5, 0)
[ 0 0 0 16]
TACACACACTACGCTCGGCCTAACAGGATCTGCGTAACCCAATAACACGCTGGCCGTAAACGCGGCCCTGAAGTACGCACCTCTAC
idx 8 locidx 422
0 T
5 (0, 5, 5, 0)
[ 0 0 21 0]
5 T
10 (5, 5, 5, 0)
[ 0 0 21 0]
6 G
11 (6, 5, 5, 0)
[ 0 0 0 21]
10 A
15 (10, 5, 5, 0)
[ 0 21 0 0]
24 C
29 (24, 5, 5, 0)
[21 0 0 0]
25 A
30 (25, 5, 5, 0)
[ 0 21 0 0]
36 A
41 (36, 5, 5, 0)
[ 0 21 0 0]
TTGTGTGTAGATCAGACCCCCCCACAAAGACTTCAAATCTGGCTTAGGACTAAGAAGACAACACAACCAAGTTAATCACTCATCCT
idx 8 locidx 423
0 T
5 (0, 5, 5, 0)
[ 0 0 16 0]
26 C
31 (26, 5, 5, 0)
[16 0 0 0]
30 G
35 (30, 5, 5, 0)
[ 0 0 0 16]
38 A
43 (38, 5, 5, 0)
[ 0 16 0 0]
TCACACTAGTAACCAGATATAGTGAACCGTGGTTCTCTAGTCGAGCCGTAGCACGGCGAGAAAGGCCTCAGGGTCCAGGCCTTGGA
idx 8 locidx 424
18 C
23 (18, 5, 5, 0)
[14 0 0 0]
52 G
57 (52, 5, 5, 0)
[ 0 0 0 14]
57 C
62 (57, 5, 5, 0)
[14 0 0 0]
72 A
77 (72, 5, 5, 0)
[ 0 14 0 0]
84 G
89 (84, 5, 5, 0)
[ 0 0 0 14]
AAAGACCCTTTACCATTACCACCGCCACGCCACACCCCTGCCACTCTTTTTTGCAGGCATTGATATACTTAAAATTACATCATGGA
idx 8 locidx 425
12 A
17 (12, 5, 5, 0)
[ 0 18 0 0]
53 T
58 (53, 5, 5, 0)
[ 0 0 18 0]
56 G
61 (56, 5, 5, 0)
[ 0 0 0 18]
59 W
64 (59, 5, 5, 0)
[0 9 9 0]
63 T
68 (63, 5, 5, 0)
[ 0 0 18 0]
72 C
77 (72, 5, 5, 0)
[18 0 0 0]
74 C
79 (74, 5, 5, 0)
[18 0 0 0]
83 C
88 (83, 5, 5, 0)
[18 0 0 0]
TAAGAAGCAAGTACATAACGATTGTTGACATGCCGATCCGGCTCCTAGTAGAGTGGGCTWTGCTGCTCCACCCACGCTATGAGCAT
idx 8 locidx 426
8 G
13 (8, 5, 5, 0)
[ 0 0 0 21]
20 A
25 (20, 5, 5, 0)
[ 0 21 0 0]
39 A
44 (39, 5, 5, 0)
[ 0 21 0 0]
76 C
81 (76, 5, 5, 0)
[21 0 0 0]
82 A
87 (82, 5, 5, 0)
[ 0 21 0 0]
CCCCGCACGCTCTCTCTGGTACATCCGCAAAATCATGCGAGGGGCCTAGATGGGTCTAAAACCGTTTAATAGCATGCAGGCGATGT
idx 8 locidx 427
4 G
9 (4, 5, 5, 0)
[ 0 0 0 21]
5 T
10 (5, 5, 5, 0)
[ 0 0 21 0]
9 A
14 (9, 5, 5, 0)
[ 0 21 0 0]
24 A
29 (24, 5, 5, 0)
[ 0 21 0 0]
68 C
73 (68, 5, 5, 0)
[21 0 0 0]
73 A
78 (73, 5, 5, 0)
[ 0 21 0 0]
AAACGTAGCATGTAGACAACTCTTAGTTTGCCTTCTGTTTTCACATCCATGTACGACCGGAAAGCCTTCTAGCACGAGAAGTCAGT
idx 8 locidx 428
18 T
23 (18, 5, 5, 0)
[ 0 0 20 0]
46 T
51 (46, 5, 5, 0)
[ 0 0 20 0]
64 G
69 (64, 5, 5, 0)
[ 0 0 0 20]
78 C
83 (78, 5, 5, 0)
[20 0 0 0]
GCCAACCACTCCCTGAACTGTAAGTAGCGGACGGTCTTCGTTATATTTGCTGACACCACACGTTGTCAGGTTGGTCTTCTTCTCTC
idx 8 locidx 429
10 T
15 (10, 5, 5, 0)
[ 0 0 20 0]
12 C
17 (12, 5, 5, 0)
[20 0 0 0]
16 T
21 (16, 5, 5, 0)
[ 0 0 20 0]
25 A
30 (25, 5, 5, 0)
[ 0 20 0 0]
30 C
35 (30, 5, 5, 0)
[20 0 0 0]
47 G
52 (47, 5, 5, 0)
[ 0 0 0 20]
66 C
71 (66, 5, 5, 0)
[20 0 0 0]
AGATTTCGGGTTCCTGTCGGCTTGCACGCCCGAAATAGGGTACTAGAGTGCAACCGACCTCCCTAACGCATGAATCTACCTCGGCT
idx 8 locidx 430
25 T
30 (25, 5, 5, 0)
[ 0 0 19 0]
51 G
56 (51, 5, 5, 0)
[ 0 0 0 19]
58 T
63 (58, 5, 5, 0)
[ 0 0 19 0]
62 A
67 (62, 5, 5, 0)
[ 0 19 0 0]
71 C
76 (71, 5, 5, 0)
[19 0 0 0]
ACTGAATCCACAGCCTGTGTCGCCATAGAATTTCTGGTTTGACAGCTAGAGGAGTACGTCGTATTTCAGCCCGACACATGGCTCCC
idx 8 locidx 431
3 C
8 (3, 5, 5, 0)
[19 0 0 0]
21 C
26 (21, 5, 5, 0)
[19 0 0 0]
56 C
61 (56, 5, 5, 0)
[19 0 0 0]
81 C
86 (81, 5, 5, 0)
[19 0 0 0]
ACACATAAAGGTGATGAACTCCACGCCGGGGTGGGGTCAGTTGAGAGCTTGATTTTCACTTCGCATACCTCTTTCCACTACCGAGC
idx 8 locidx 432
22 G
27 (22, 5, 5, 0)
[ 0 0 0 22]
24 A
29 (24, 5, 5, 0)
[ 0 22 0 0]
26 G
31 (26, 5, 5, 0)
[ 0 0 0 22]
35 G
40 (35, 5, 5, 0)
[ 0 0 0 22]
39 A
44 (39, 5, 5, 0)
[ 0 22 0 0]
62 C
67 (62, 5, 5, 0)
[22 0 0 0]
70 A
75 (70, 5, 5, 0)
[ 0 22 0 0]
72 C
77 (72, 5, 5, 0)
[22 0 0 0]
83 G
88 (83, 5, 5, 0)
[ 0 0 0 22]
CGGCTACGCTGAGTAAATACGTGGAGGAGGTCAGTGCTAATTATAGTTCGGCAGGTTAATAACCAAGTGCAACCGTTATCAGGGTC
idx 8 locidx 433
23 C
28 (23, 5, 5, 0)
[16 0 0 0]
46 T
51 (46, 5, 5, 0)
[ 0 0 16 0]
56 A
61 (56, 5, 5, 0)
[ 0 16 0 0]
CCGAGACAGTAAGGCTGAAAGAACTCCGGGTCAGGGTCGCTATTGATACGCTGTCCAACCCCTAAGTACTTT-GCACAATACTAGC
idx 8 locidx 434
61 C
66 (61, 5, 5, 0)
[24 0 0 0]
74 T
79 (74, 5, 5, 0)
[ 0 0 24 0]
75 G
80 (75, 5, 5, 0)
[ 0 0 0 24]
ATGTAGTGTTTACAATCGGAAGCACTTCGCTTCAGGCTCTCTATCGGTGCGTGCCGAGTCCCTAAGTGTTAGGCTGGAAAGCATCT
idx 8 locidx 435
22 A
27 (22, 5, 5, 0)
[ 0 20 0 0]
23 C
28 (23, 5, 5, 0)
[20 0 0 0]
31 G
36 (31, 5, 5, 0)
[ 0 0 0 20]
37 A
42 (37, 5, 5, 0)
[ 0 20 0 0]
49 A
54 (49, 5, 5, 0)
[ 0 20 0 0]
65 C
70 (65, 5, 5, 0)
[20 0 0 0]
CCCATCTCTAGATCGCAATCTCACATTCGTGGTGTGGAATGTGTCTACTACCTTGAATGTTAGGTCACTGGAAGACTTCGGGCAAT
idx 8 locidx 436
3 T
8 (3, 5, 5, 0)
[ 0 0 19 0]
12 T
17 (12, 5, 5, 0)
[ 0 0 19 0]
37 G
42 (37, 5, 5, 0)
[ 0 0 0 19]
39 G
44 (39, 5, 5, 0)
[ 0 0 0 19]
44 Y
49 (44, 5, 5, 0)
[ 8 0 11 0]
52 C
57 (52, 5, 5, 0)
[19 0 0 0]
65 T
70 (65, 5, 5, 0)
[ 0 0 19 0]
67 T
72 (67, 5, 5, 0)
[ 1 0 18 0]
73 A
78 (73, 5, 5, 0)
[ 0 19 0 0]
CACTTCCCCCGGTAACTATTAGCAGCACATCTATCTGGTGAAACYCGTTCTTCCGGATTCTTCGTTCTGATACAGTGCACATCCAA
idx 8 locidx 437
16 G
21 (16, 5, 5, 0)
[ 0 0 0 22]
27 T
32 (27, 5, 5, 0)
[ 0 0 22 0]
58 C
63 (58, 5, 5, 0)
[22 0 0 0]
68 C
73 (68, 5, 5, 0)
[22 0 0 0]
AGTAGATCGCGCCTGAGTCGCCCTTAATCCTGATACGTTTCTACGGATGGGACCGAATCGGATCGGTGCGCCAATGGAGGTTAAAC
idx 8 locidx 438
21 T
26 (21, 5, 5, 0)
[ 0 0 20 0]
74 C
79 (74, 5, 5, 0)
[20 0 0 0]
75 G
80 (75, 5, 5, 0)
[ 0 0 0 20]
81 C
86 (81, 5, 5, 0)
[20 0 0 0]
GCGTCCTGCCCATTTTGCAGATATTGAATATGAGTAGTTACCGTGGACTCGGTGTGAACCTAGTAACTGTCAAACGCGGCCCCTAG
idx 8 locidx 439
9 T
14 (9, 5, 5, 0)
[ 0 0 16 0]
15 A
20 (15, 5, 5, 0)
[ 0 16 0 0]
22 C
27 (22, 5, 5, 0)
[16 0 0 0]
37 A
42 (37, 5, 5, 0)
[ 0 16 0 0]
82 C
87 (82, 5, 5, 0)
[16 0 0 0]
TAGCCCTGCTCAAACAGACTGGCTCGCAGCATAATGCACCCAAATGGAGAATCGTTGGACACCCCGCACCAAGTACATTCCGCTTA
idx 8 locidx 440
0 G
5 (0, 5, 5, 0)
[ 0 0 0 15]
53 G
58 (53, 5, 5, 0)
[ 0 0 0 15]
57 T
62 (57, 5, 5, 0)
[ 0 0 15 0]
58 G
63 (58, 5, 5, 0)
[ 0 0 0 15]
84 A
89 (84, 5, 5, 0)
[ 0 15 0 0]
GCGGTGGTCCGGATAATCGTATATAGATCTACACTCCCTGGCGACAGGGCCTAGATGTGCGGTGACGCTTCTCATTTATTGACCAT
idx 8 locidx 441
7 C
12 (7, 5, 5, 0)
[17 0 0 0]
8 G
13 (8, 5, 5, 0)
[ 0 0 0 17]
11 G
16 (11, 5, 5, 0)
[ 0 0 0 17]
15 T
20 (15, 5, 5, 0)
[ 0 0 17 0]
32 A
37 (32, 5, 5, 0)
[ 0 17 0 0]
33 T
38 (33, 5, 5, 0)
[ 0 0 17 0]
60 T
65 (60, 5, 5, 0)
[ 0 0 17 0]
TCGTTATCGTCGGTCTATTACGAGTACCGTCCATTGAAGCAGCGTTGCGGTCTGTTGACATGAGAGCGCCTATCTGTAATACTAAA
idx 8 locidx 442
2 C
7 (2, 5, 5, 0)
[21 0 0 0]
14 T
19 (14, 5, 5, 0)
[ 0 0 21 0]
29 W
34 (29, 5, 5, 0)
[ 0 9 12 0]
48 G
53 (48, 5, 5, 0)
[ 0 0 0 21]
65 A
70 (65, 5, 5, 0)
[ 0 21 0 0]
79 A
84 (79, 5, 5, 0)
[ 0 21 0 0]
AACTTTTCCCTAGCTGATATTACTACATTWTATCCATTTCTCACACTCGCGCTCTGAAAGTCAGTATAAAGCCGAGCGTACGTACT
idx 8 locidx 443
70 A
75 (70, 5, 5, 0)
[ 0 22 0 0]
74 G
79 (74, 5, 5, 0)
[ 0 0 0 22]
TTCGCATTCCATTGTGGTCCTAGTTTAATACTCGTACTCATACGTCGGTTACGATAACTGCCACCCGATAACTAGGACTGAAGCTA
idx 8 locidx 444
52 A
57 (52, 5, 5, 0)
[ 0 22 0 0]
78 K
83 (78, 5, 5, 0)
[ 0 0 9 13]
79 G
84 (79, 5, 5, 0)
[ 0 0 0 22]
TGTTAATCACTGGCAGTAGGCGGGCAAAACGCGTGTAATTTCGCTTGCGCAGATGGGTGAATTGAAAACGCGACCATCKGTACCCA
idx 8 locidx 445
15 W
20 (15, 5, 5, 0)
[ 0 10 8 0]
31 T
36 (31, 5, 5, 0)
[ 0 0 18 0]
75 G
80 (75, 5, 5, 0)
[ 0 0 0 18]
83 A
88 (83, 5, 5, 0)
[ 0 18 0 0]
ATCATAATACTCCCGWGGCGAGACGGGTTCATTACTACGTGAGACCGTTCGTTTTGGAAAACACAGGATCTCATTGACCTAGTACG
idx 8 locidx 446
5 T
10 (5, 5, 5, 0)
[ 0 0 19 0]
8 C
13 (8, 5, 5, 0)
[19 0 0 0]
18 C
23 (18, 5, 5, 0)
[19 0 0 0]
39 T
44 (39, 5, 5, 0)
[ 0 0 19 0]
48 A
53 (48, 5, 5, 0)
[ 0 19 0 0]
ACGGTTATCGATAAGTGCCGACTCCTAGCTGCAATCCTTTGGATATACACTGCACCCGTTTTATACCCAGGTCCTCCTGCCGAGGA
idx 8 locidx 447
4 A
9 (4, 5, 5, 0)
[ 0 21 0 0]
6 T
11 (6, 5, 5, 0)
[ 0 0 21 0]
71 C
76 (71, 5, 5, 0)
[21 0 0 0]
AGAGAATGCGTCGATAATGGATCACACAGGGCTATAGATGTGAGCCTACTATAACAGAGTTTGGCGCGGAGCGGCAAGCTAGCACT
idx 8 locidx 448
17 C
22 (17, 5, 5, 0)
[20 0 0 0]
19 C
24 (19, 5, 5, 0)
[20 0 0 0]
26 C
31 (26, 5, 5, 0)
[20 0 0 0]
CAATGTCCGCGAGGACCCCCCCTAAACGACTCCAAGTTGTGAGCCCCAACCTCCTTCTTGCACGATAGAGTTCGCATGTCTCCTAG
idx 8 locidx 449
8 T
13 (8, 5, 5, 0)
[ 0 0 16 0]
21 A
26 (21, 5, 5, 0)
[ 0 16 0 0]
43 T
48 (43, 5, 5, 0)
[ 0 0 16 0]
61 G
66 (61, 5, 5, 0)
[ 0 0 0 16]
69 G
74 (69, 5, 5, 0)
[ 0 0 0 16]
72 G
77 (72, 5, 5, 0)
[ 0 0 0 16]
76 A
81 (76, 5, 5, 0)
[ 0 16 0 0]
80 A
85 (80, 5, 5, 0)
[ 0 16 0 0]
AACGCCATTTTTGATGGGACAACACTGGCGGGCGTTGATTGGATTCTCGTTTAACGTGAAGGGAAGTGAGGGGACGAGTCAAAGGA
idx 9 locidx 450
34 G
39 (34, 5, 5, 0)
[ 0 0 0 20]
64 A
69 (64, 5, 5, 0)
[ 0 20 0 0]
GAAACTGTGTCCGTCGAGAGGTTGATCGTTCTTCGAAGTTATTTTAAATCAGGCGCCATAGCCTAATCCAAGGCGGTGATGCAGAT
idx 9 locidx 451
56 A
61 (56, 5, 5, 0)
[ 0 24 0 0]
70 C
75 (70, 5, 5, 0)
[23 1 0 0]
GGACCAGCTAACGGAACAATGGTAGGTTGCTAAGATGAGGGTCAGCCCTACAAAAGAATCTTAATTAGTCCGCAGCATCCCTAAAT
idx 9 locidx 452
5 T
10 (5, 5, 5, 0)
[ 0 0 23 0]
22 C
27 (22, 5, 5, 0)
[23 0 0 0]
63 C
68 (63, 5, 5, 0)
[23 0 0 0]
76 C
81 (76, 5, 5, 0)
[23 0 0 0]
TCAACTATGCGTGCACCCGTCACCGTGTGCACCTCGGGTGGTCTCTGAGACAGTATAGCAATTCCGGACACAAGGCCGCCATCAAC
idx 9 locidx 453
2 G
7 (2, 5, 5, 0)
[ 0 0 0 22]
3 G
8 (3, 5, 5, 0)
[ 0 0 0 22]
24 R
29 (24, 5, 5, 0)
[ 0 6 0 16]
47 T
52 (47, 5, 5, 0)
[ 0 1 21 0]
66 A
71 (66, 5, 5, 0)
[ 0 22 0 0]
68 C
73 (68, 5, 5, 0)
[22 0 0 0]
70 T
75 (70, 5, 5, 0)
[ 0 0 22 0]
77 T
82 (77, 5, 5, 0)
[ 0 0 22 0]
ATGGCGGGTCAGCTAACGGACCGARGGCCGCCTTATTACCGTACTGCTGGGGTACCCTGATGAAGAATCGTATCGCTTCCTTCCTC
idx 9 locidx 454
16 C
21 (16, 5, 5, 0)
[19 0 0 0]
48 C
53 (48, 5, 5, 0)
[19 0 0 0]
55 T
60 (55, 5, 5, 0)
[ 0 0 19 0]
72 C
77 (72, 5, 5, 0)
[19 0 0 0]
GAGCGACATGACCCGACTACTTCGGTAGTTGTCCTTTCATTTAGCTGACCTTGGATGATTCCCTATATAAAACATAGTTCGAAGAG
idx 9 locidx 455
8 C
13 (8, 5, 5, 0)
[20 0 0 0]
17 A
22 (17, 5, 5, 0)
[ 0 20 0 0]
20 A
25 (20, 5, 5, 0)
[ 0 20 0 0]
72 C
77 (72, 5, 5, 0)
[20 0 0 0]
TCGAGACACCGTTATCTATCAATATTGTCCTAAGGTGGAAACGACTCTTTCTAGTGGACCGTCTACGCACGCCATGCCTGAAATAT
idx 9 locidx 456
17 C
22 (17, 5, 5, 0)
[22 0 0 0]
76 G
81 (76, 5, 5, 0)
[ 0 0 0 22]
GGAATGGCGGCGTTATACCAACGGTCGCTTATAATACATGCAAGTGGAAGAGACATCTGTGAGTGACGCACAGAGAGAGACGCATT
idx 9 locidx 457
9 C
14 (9, 5, 5, 0)
[19 0 0 0]
17 A
22 (17, 5, 5, 0)
[ 0 19 0 0]
59 T
64 (59, 5, 5, 0)
[ 0 0 19 0]
74 T
79 (74, 5, 5, 0)
[ 0 0 19 0]
CCCGAACTACGAGTCCTAGACCCTCAACAGACGCCGGGTGCAGGTTGGGTATCCCTGGTTGACGCGAGCCAAGGTGCGCCCATGAT
idx 9 locidx 458
1 T
6 (1, 5, 5, 0)
[ 0 0 22 0]
24 A
29 (24, 5, 5, 0)
[ 0 22 0 0]
34 T
39 (34, 5, 5, 0)
[ 0 0 22 0]
46 G
51 (46, 5, 5, 0)
[ 0 0 0 22]
74 A
79 (74, 5, 5, 0)
[ 0 22 0 0]
75 G
80 (75, 5, 5, 0)
[ 0 0 0 22]
ATTAGCCTTCCTCCTGAGGACATTATTCACGCAATTCTGAGTCCAAGGCGAATCTTAGCACTAAGCGAAGCGGAAGCTGTATCTAT
idx 9 locidx 459
52 A
57 (52, 5, 5, 0)
[ 0 18 0 0]
ACTGACATCCAAAATAGATATGCCCCAAGATCTCTTGTACCGCCGTGCATTTAATCCAGTTTCCACCTTTGAACACTTATACGACA
idx 9 locidx 460
14 C
19 (14, 5, 5, 0)
[22 0 0 0]
25 T
30 (25, 5, 5, 0)
[ 0 0 22 0]
29 T
34 (29, 5, 5, 0)
[ 0 0 22 0]
65 T
70 (65, 5, 5, 0)
[ 0 0 22 0]
ACGTGATGGCTATCCATAGAGCGCCTTATTTGCGGGTACGTACACCCATCATGTGCCCCGAAGACTGGGTGATTTCGCCCGAGCGT
idx 9 locidx 461
19 C
24 (19, 5, 5, 0)
[22 0 0 0]
TCGCCCCCAAACCTACTCACATAGGCTTCAGGTTGACCCATTTTATAGTGGACGGCCGAAGCGGGCGGTGATTCACGGATCGGAAT
idx 9 locidx 462
3 G
8 (3, 5, 5, 0)
[ 0 0 0 18]
9 C
14 (9, 5, 5, 0)
[18 0 0 0]
13 T
18 (13, 5, 5, 0)
[ 0 0 18 0]
38 C
43 (38, 5, 5, 0)
[18 0 0 0]
57 G
62 (57, 5, 5, 0)
[ 0 0 0 18]
80 T
85 (80, 5, 5, 0)
[ 0 0 18 0]
GATGGTGCGCTGCTGTTATGATAACCTGAGTCGTTGACCCGCCTAAAAGGCAAGGGCGTTGGCCGGCTTTTCATTATTAGTCCAGC
idx 9 locidx 463
4 G
9 (4, 5, 5, 0)
[ 0 0 0 23]
49 G
54 (49, 5, 5, 0)
[ 0 0 0 23]
GTTCGACGCCATATCTTGGGCTATTTACTACCAGTTTTGAGGTGAACTTGTCCAGATCGTGGAGTGACTAACAACCACGTTTGCGT
idx 9 locidx 464
36 G
41 (36, 5, 5, 0)
[ 0 0 0 23]
83 G
88 (83, 5, 5, 0)
[ 0 0 0 23]
CTGTAGAACGGTGCCTCTTGAAAGAGGCGAGCGGACGAAATATGCTTCTAGAAACAATGTTTAATACTCCACGACCTGACGGGGCG
idx 9 locidx 465
5 T
10 (5, 5, 5, 0)
[ 0 0 15 0]
16 T
21 (16, 5, 5, 0)
[ 0 0 15 0]
22 C
27 (22, 5, 5, 0)
[15 0 0 0]
59 C
64 (59, 5, 5, 0)
[15 0 0 0]
GCTATTACGGGCCGGATCACCCCGGGTACTGTGACGAGCTTTGGTTATCACCGGCCTTCCTGGGGTGTCCAGCAACACACGTATAG
idx 9 locidx 466
38 G
43 (38, 5, 5, 0)
[ 0 0 0 21]
44 C
49 (44, 5, 5, 0)
[21 0 0 0]
82 C
87 (82, 5, 5, 0)
[21 0 0 0]
TGTGGTTAGGCGTCAGGCGAAAGGCCGAGCACGAGTGCGTTGAGCATGAGCCAAAATCATGTGCGGACGCCTGCCGGGTAATCGAA
idx 9 locidx 467
31 A
36 (31, 5, 5, 0)
[ 0 24 0 0]
35 G
40 (35, 5, 5, 0)
[ 0 0 0 24]
57 G
62 (57, 5, 5, 0)
[ 0 0 0 24]
75 A
80 (75, 5, 5, 0)
[ 0 24 0 0]
80 T
85 (80, 5, 5, 0)
[ 0 0 24 0]
CAATGCTTCATTCTTCGTCGAGGCGGACAGTAGATGGTCACACCTGAGCCTGGTCTAGCGCTTTTAGGCCTCGATACGTTTCTTAC
idx 9 locidx 468
11 C
16 (11, 5, 5, 0)
[18 0 0 0]
33 A
38 (33, 5, 5, 0)
[ 0 18 0 0]
TTTGCTCCAAGCAATCAGGTGGAAATCCCAGTGATCGAGTAGGGATGCGACGGTAGGGAAAGTCTGAAGTTATAGTCACTCTCAAA
idx 9 locidx 469
3 G
8 (3, 5, 5, 0)
[ 0 0 0 17]
9 T
14 (9, 5, 5, 0)
[ 0 0 17 0]
54 T
59 (54, 5, 5, 0)
[ 0 0 17 0]
55 A
60 (55, 5, 5, 0)
[ 0 17 0 0]
59 G
64 (59, 5, 5, 0)
[ 0 0 0 17]
84 T
89 (84, 5, 5, 0)
[ 0 0 17 0]
85 A
90 (85, 5, 5, 0)
[ 0 17 0 0]
TCGGACGTTTGATAATGGACGATCCCTTACCAGTCTACAATTCCTGGTCGCCAGTACACGCCTCAGATTATTTTGGCTCCCGCATA
idx 9 locidx 470
1 C
6 (1, 5, 5, 0)
[19 0 0 0]
66 C
71 (66, 5, 5, 0)
[19 0 0 0]
GCAAAGCACGGATCACCCCCGCCCATCTCCCAGGCTTAATTCCCACATCTACTGTGTTTAAGGTAGCACTTCCATGTTGAAATATC
idx 9 locidx 471
15 A
20 (15, 5, 5, 0)
[ 0 15 0 0]
55 C
60 (55, 5, 5, 0)
[15 0 0 0]
ATCAGTTATTCCTCCATTTCATCAAATTTAAAGCAGGGGACTCGTACTATCATTGCACTCCGCGGGACAGTAGTAGATAGGGCCGC-
idx 9 locidx 472
2 G
7 (2, 5, 5, 0)
[ 0 0 0 15]
35 A
40 (35, 5, 5, 0)
[ 0 15 0 0]
45 C
50 (45, 5, 5, 0)
[15 0 0 0]
47 C
52 (47, 5, 5, 0)
[15 0 0 0]
55 C
60 (55, 5, 5, 0)
[15 0 0 0]
57 C
62 (57, 5, 5, 0)
[15 0 0 0]
58 S
63 (58, 5, 5, 0)
[8 0 0 7]
62 A
67 (62, 5, 5, 0)
[ 0 15 0 0]
81 C
86 (81, 5, 5, 0)
[15 0 0 0]
AAGAACAATTACACCCATTATACGCCTTTATAAGCATCGTAAATTCTCAATCGGGCGCSACAAGTCACCAATCAGCGACCACTGGG
idx 9 locidx 473
2 A
7 (2, 5, 5, 0)
[ 0 19 0 0]
17 T
22 (17, 5, 5, 0)
[ 0 0 19 0]
28 A
33 (28, 5, 5, 0)
[ 0 19 0 0]
81 G
86 (81, 5, 5, 0)
[ 0 0 0 19]
TGAACCTTTGACGTCCCTGTTGATCCCTAATTAGCTGGCTATGCCTGCTGCTTCAACATAACATGTGTGAATTTAGGTTTTGGTCG
idx 9 locidx 474
5 T
10 (5, 5, 5, 0)
[ 0 0 20 0]
13 C
18 (13, 5, 5, 0)
[20 0 0 0]
CGCGGTTCTCGAACACTGGAACGCGTCTCTAGTTTGGGTAGTTCTGAATGCGTAGGAAGGCTAGAACAGCGGCATGTTCATGTGCT
idx 9 locidx 475
29 C
34 (29, 5, 5, 0)
[25 0 0 0]
39 C
44 (39, 5, 5, 0)
[25 0 0 0]
43 T
48 (43, 5, 5, 0)
[ 0 0 25 0]
47 G
52 (47, 5, 5, 0)
[ 0 0 0 25]
57 G
62 (57, 5, 5, 0)
[ 0 0 0 25]
60 A
65 (60, 5, 5, 0)
[ 0 25 0 0]
GCGACTCAACTACGTTGAACAATTGAGCTCAATCGTAGTCACCTGTAGGCTGCTCCCGCAATCAGATGACATGGTTTCGGCGCGCC
idx 9 locidx 476
10 A
15 (10, 5, 5, 0)
[ 0 25 0 0]
21 G
26 (21, 5, 5, 0)
[ 0 0 0 25]
32 T
37 (32, 5, 5, 0)
[ 0 0 25 0]
69 T
74 (69, 5, 5, 0)
[ 0 0 25 0]
TTGATACCATACAGGACTACCGATCTCGTCAATCAGTGCATTATCGCGAATATGTGAAACAGGACACAATCTTCTATCACACAAGT
idx 9 locidx 477
27 C
32 (27, 5, 5, 0)
[20 0 0 0]
46 T
51 (46, 5, 5, 0)
[ 0 0 20 0]
66 G
71 (66, 5, 5, 0)
[ 0 0 0 20]
73 T
78 (73, 5, 5, 0)
[ 0 0 20 0]
CAAGTTCCATGGGATCTCCGGGTTAAACTCTAAGCATGCATTCATTTGCACGCGCAAACGCGTCGCGTATCATTGGAATAGTGTGT
idx 9 locidx 478
15 A
20 (15, 5, 5, 0)
[ 0 15 0 0]
20 A
25 (20, 5, 5, 0)
[ 0 15 0 0]
63 A
68 (63, 5, 5, 0)
[ 0 15 0 0]
74 G
79 (74, 5, 5, 0)
[ 0 0 0 15]
CTATCGGCCCAGCTTATCGAAACGAAGTTTATGTTATCAACGGCTTACTGGTGACCACCACAAAGCTTCCGGGGGGTATGCGACAT
idx 9 locidx 479
2 G
7 (2, 5, 5, 0)
[ 0 0 0 20]
28 T
33 (28, 5, 5, 0)
[ 0 0 20 0]
61 A
66 (61, 5, 5, 0)
[ 0 20 0 0]
65 G
70 (65, 5, 5, 0)
[ 0 0 0 20]
77 C
82 (77, 5, 5, 0)
[20 0 0 0]
81 A
86 (81, 5, 5, 0)
[ 0 20 0 0]
AAGCTATGTCGTCTTAGCCGATTTTCGCTCGGTTTCAGCATAAAATACTGATCTGACCATTAGACGCAACCCGCTCTCTCCAGATG
idx 9 locidx 480
8 A
13 (8, 5, 5, 0)
[ 0 15 0 0]
14 T
19 (14, 5, 5, 0)
[ 0 0 15 0]
19 C
24 (19, 5, 5, 0)
[15 0 0 0]
36 A
41 (36, 5, 5, 0)
[ 0 15 0 0]
47 G
52 (47, 5, 5, 0)
[ 0 0 0 15]
GATTATAGACTGGATGTTCCCGTGCGAGCAATTATAAGCCGGCCTATGGAGCTCGCAAGTCTATGTGTGGAATATCTGCTCAACAC
idx 9 locidx 481
27 A
32 (27, 5, 5, 0)
[ 0 19 0 0]
37 T
42 (37, 5, 5, 0)
[ 0 0 19 0]
60 T
65 (60, 5, 5, 0)
[ 0 0 19 0]
67 G
72 (67, 5, 5, 0)
[ 0 0 0 19]
TGTAACGTTCCCAGTACTTATGCCCCAAAGCTGAGCCTTTGTGTTGCCCGGCGCACCGCATAGCGAAGGACGTCAACCAATCATAC
idx 9 locidx 482
28 C
33 (28, 5, 5, 0)
[20 0 0 0]
38 A
43 (38, 5, 5, 0)
[ 0 20 0 0]
61 T
66 (61, 5, 5, 0)
[ 0 1 19 0]
63 C
68 (63, 5, 5, 0)
[20 0 0 0]
71 A
76 (71, 5, 5, 0)
[ 0 20 0 0]
82 T
87 (82, 5, 5, 0)
[ 0 0 20 0]
83 C
88 (83, 5, 5, 0)
[20 0 0 0]
85 G
90 (85, 5, 5, 0)
[ 0 0 0 20]
CTCCTCTTGCGTAGTTTGATCGGGCGTCCAGGGGTGATACTACGACGTAGTCCTCATTGACTACATTACCCAAAGGAGAGGATCCG
idx 9 locidx 483
1 C
6 (1, 5, 5, 0)
[17 0 0 0]
8 C
13 (8, 5, 5, 0)
[17 0 0 0]
31 C
36 (31, 5, 5, 0)
[17 0 0 0]
45 G
50 (45, 5, 5, 0)
[ 0 0 0 17]
59 A
64 (59, 5, 5, 0)
[ 0 17 0 0]
GCAGTGAACACTAGACCCTTTCTGGACCGGTCGTTCAGGGACTCAGTTGTCGCTCCGCCATTCCCCTTGTCACATGCAAACATTCG
idx 9 locidx 484
18 T
23 (18, 5, 5, 0)
[ 0 0 25 0]
23 G
28 (23, 5, 5, 0)
[ 0 0 0 25]
43 T
48 (43, 5, 5, 0)
[ 0 0 25 0]
59 C
64 (59, 5, 5, 0)
[25 0 0 0]
61 Y
66 (61, 5, 5, 0)
[14 0 11 0]
AGGCGAGCTCTACTTCCATCATAGAAGGTAGATATTAATCTTCTGTCCTATCTGTGGACCTYTAGCATGCTAACGCAATTTTCCAG
idx 9 locidx 485
14 T
19 (14, 5, 5, 0)
[ 0 0 17 0]
26 A
31 (26, 5, 5, 0)
[ 0 17 0 0]
49 G
54 (49, 5, 5, 0)
[ 0 0 0 17]
57 C
62 (57, 5, 5, 0)
[17 0 0 0]
64 C
69 (64, 5, 5, 0)
[17 0 0 0]
81 R
86 (81, 5, 5, 0)
[0 8 0 9]
ATACTTCGCCCGGTTCTCCATACCCCATTCTTTGCTGCTTCTTCTGAGCGCACTCGACCTATGCCTAGTCGCACCTCGCATRTTTG
idx 9 locidx 486
10 T
15 (10, 5, 5, 0)
[ 0 0 18 0]
23 C
28 (23, 5, 5, 0)
[18 0 0 0]
26 G
31 (26, 5, 5, 0)
[ 0 0 0 18]
49 G
54 (49, 5, 5, 0)
[ 0 0 0 18]
59 G
64 (59, 5, 5, 0)
[ 0 0 0 18]
TCGGGTGGTTTCAGGGTTCAGCGCCAGACACCCCTCAATCTTATTGCGCGGTCGCGAGAGACTCGTGGACCCGTCGCGAAATAGCT
idx 9 locidx 487
3 G
8 (3, 5, 5, 0)
[ 0 0 0 19]
16 G
21 (16, 5, 5, 0)
[ 0 0 0 19]
23 T
28 (23, 5, 5, 0)
[ 0 0 19 0]
24 C
29 (24, 5, 5, 0)
[19 0 0 0]
28 T
33 (28, 5, 5, 0)
[ 0 0 19 0]
31 A
36 (31, 5, 5, 0)
[ 0 19 0 0]
76 C
81 (76, 5, 5, 0)
[19 0 0 0]
AGCGCAAGTTCGGGGAGTTAACATCTTATGAATTTGCGACCAATTACATTAGTAAACCCCCGGCGTCGTCAGTAGTCAATTTCTCC
idx 9 locidx 488
23 Y
27 (23, 5, 5, 1)
[14 0 7 0]
32 G
36 (32, 5, 5, 1)
[ 0 0 0 21]
39 T
42 (39, 5, 5, 2)
[ 0 0 21 0]
62 C
65 (62, 5, 5, 2)
[21 0 0 0]
TTACACATTACACCTCTGCGG-CYTGTTCGATGCATGA-TTGATGCCTGCAGCTTCCATGCCCCGGTTGTTTCTTTATCCTGACACTG
idx 9 locidx 489
0 T
5 (0, 5, 5, 0)
[ 0 0 20 0]
36 C
41 (36, 5, 5, 0)
[20 0 0 0]
58 G
63 (58, 5, 5, 0)
[ 0 0 0 20]
62 C
67 (62, 5, 5, 0)
[20 0 0 0]
65 T
70 (65, 5, 5, 0)
[ 0 0 20 0]
73 G
78 (73, 5, 5, 0)
[ 0 0 0 20]
82 A
87 (82, 5, 5, 0)
[ 0 20 0 0]
TAAATCATGTCGTGGTGTGGTGTAGTACGGTCGGCGCATGAAACCGTGTCACAATACTGTCACCATATCACACGATACTGTGATGC
idx 9 locidx 490
30 C
35 (30, 5, 5, 0)
[16 0 0 0]
31 G
36 (31, 5, 5, 0)
[ 0 0 0 16]
39 C
44 (39, 5, 5, 0)
[16 0 0 0]
46 C
51 (46, 5, 5, 0)
[16 0 0 0]
56 G
61 (56, 5, 5, 0)
[ 0 0 0 16]
74 C
79 (74, 5, 5, 0)
[16 0 0 0]
80 A
85 (80, 5, 5, 0)
[ 0 16 0 0]
GATTCTCTACGAAAGTGGGTCTTTATCGTTCGTTACGGGCCTTCGGCGTTTGTTGGGGAGTGAGACGCGAGTCCCACATTATCTCG
idx 9 locidx 491
36 T
41 (36, 5, 5, 0)
[ 0 0 21 0]
57 A
62 (57, 5, 5, 0)
[ 0 21 0 0]
65 R
70 (65, 5, 5, 0)
[ 0 9 0 12]
TAACTGTGAGTATCAGACGCTCGGTCGCTCAAGTACTGAGAAAGTGGACCGTCCCCTAGACTAACRAAGTTATCCCGATGAGCCAT
idx 9 locidx 492
29 C
34 (29, 5, 5, 0)
[21 0 0 0]
37 A
42 (37, 5, 5, 0)
[ 0 21 0 0]
46 A
51 (46, 5, 5, 0)
[ 1 20 0 0]
TTAACTCAAGCCAAGGGTATGCGCGCGGGCTCTCCTAATCCCGATGACGAGGCGGGGAAGACCATGCTGCTCGTTAAATGATGACT
idx 9 locidx 493
44 S
49 (44, 5, 5, 0)
[ 8 0 0 10]
46 T
51 (46, 5, 5, 0)
[ 0 0 18 0]
51 G
56 (51, 5, 5, 0)
[ 0 0 0 18]
AGATAATCAATCGCCCGTCGCCAGATACATCGTATGGAGTTATTSGTTATAGAAGTTTGTATGTCGCAACTGACACCGAACTTAAC
idx 9 locidx 494
18 C
23 (18, 5, 5, 0)
[21 0 0 0]
34 G
39 (34, 5, 5, 0)
[ 0 0 0 21]
72 C
77 (72, 5, 5, 0)
[21 0 0 0]
82 W
87 (82, 5, 5, 0)
[ 0 12 9 0]
AATTGACAATAATTACCTCTGATATCCAAGACTAGCTTATTAGTTATGGGTTATGACTAATGGCTCTATTGCCGCGCGTGAAWCTC
idx 9 locidx 495
34 G
39 (34, 5, 5, 0)
[ 0 0 0 18]
40 T
45 (40, 5, 5, 0)
[ 0 0 18 0]
55 A
60 (55, 5, 5, 0)
[ 0 18 0 0]
ATTGCTCAGAGCAAACTCACGTGTTGGTAGCTCCGAGGTTTATCCATGGATTGGTATAGTGAATTGGATTTGTCCATTTGTCACCT
idx 9 locidx 496
28 T
33 (28, 5, 5, 0)
[ 0 0 19 0]
55 C
60 (55, 5, 5, 0)
[19 0 0 0]
CATAATTCCGAGTAGACATTAACCATATTTCATAAGCTTAGTACATTACACGATCCCCACAGCTACATGAGGGCTCCAGGGCTTCT
idx 9 locidx 497
9 G
14 (9, 5, 5, 0)
[ 0 0 0 20]
12 T
17 (12, 5, 5, 0)
[ 0 0 20 0]
13 C
18 (13, 5, 5, 0)
[20 0 0 0]
31 G
36 (31, 5, 5, 0)
[ 0 0 0 20]
39 A
44 (39, 5, 5, 0)
[ 0 20 0 0]
61 T
66 (61, 5, 5, 0)
[ 0 0 20 0]
62 G
67 (62, 5, 5, 0)
[ 0 0 0 20]
AATACAACAGCTTCTTGAGCTCCCGATGACTGAACTGGGAAGACCGCACAAGCAAACGTGTTGTTAGTGACGCCTACTCTCCATGT
idx 9 locidx 498
11 A
16 (11, 5, 5, 0)
[ 0 19 0 0]
50 A
55 (50, 5, 5, 0)
[ 0 19 0 0]
TGAAAACAAGTACACGTTCCCCTCCCCTCCGACAAAGGAGCTTGCCGCAGATGACGTCTTGTTTTGGGCCACCAGATTATTTTAGG
idx 9 locidx 499
6 C
11 (6, 5, 5, 0)
[17 0 0 0]
8 A
13 (8, 5, 5, 0)
[ 0 17 0 0]
55 C
60 (55, 5, 5, 0)
[17 0 0 0]
65 G
70 (65, 5, 5, 0)
[ 0 0 0 17]
TGCTCCCGATATGCATGAACACTTGGAGGGAGGACTTCTCCGTGAGTTCAAGGCTCAGTCGGCAAGACGTCAATGAATATGCGGTC
idx 10 locidx 500
0 C
5 (0, 5, 5, 0)
[22 0 0 0]
9 K
14 (9, 5, 5, 0)
[ 0 0 11 11]
12 T
17 (12, 5, 5, 0)
[ 0 0 22 0]
14 A
19 (14, 5, 5, 0)
[ 0 22 0 0]
38 T
43 (38, 5, 5, 0)
[ 0 0 22 0]
43 C
48 (43, 5, 5, 0)
[22 0 0 0]
54 T
59 (54, 5, 5, 0)
[ 0 0 22 0]
63 A
68 (63, 5, 5, 0)
[ 0 22 0 0]
CGCGACTATKAATCAAGTGTTTCGCAGGGGCCAGCACTTCGATCCCACCTCACGTTACGGCTGACGTCGTGTGAAGTAGCAACTTC
idx 10 locidx 501
16 G
21 (16, 5, 5, 0)
[ 0 0 0 18]
34 A
39 (34, 5, 5, 0)
[ 0 18 0 0]
53 G
58 (53, 5, 5, 0)
[ 0 0 0 18]
76 C
81 (76, 5, 5, 0)
[18 0 0 0]
GTAAGACCCCAATATAGCCCTATATTACTACAGGATACTTGTTATGTAGTCGTGCCCAATTTAAAACTTCCCGTACCATCCGACCT
idx 10 locidx 502
2 T
7 (2, 5, 5, 0)
[ 0 0 20 0]
13 G
18 (13, 5, 5, 0)
[ 0 0 0 20]
26 C
31 (26, 5, 5, 0)
[20 0 0 0]
48 G
53 (48, 5, 5, 0)
[ 0 0 0 20]
67 A
72 (67, 5, 5, 0)
[ 0 20 0 0]
TCTACTTCGAACAGGTACAGCCTGTGCACGAGCTTTAGTATGATATCGGGGCCCCCCACAATTGATAACAGCCAGGTCAACCCCGC
idx 10 locidx 503
2 G
7 (2, 5, 5, 0)
[ 0 0 0 16]
19 G
24 (19, 5, 5, 0)
[ 0 0 0 16]
43 G
48 (43, 5, 5, 0)
[ 0 0 0 16]
78 A
83 (78, 5, 5, 0)
[ 0 16 0 0]
TAGACGAATTTCAGCATCGGTCACACAGACCGCTAGGGCGCCCGCTCATGTGTTTTGGCAGCCCGGCTGCTCGCATGCACCGCGAA
idx 10 locidx 504
1 T
6 (1, 5, 5, 0)
[ 0 0 21 0]
71 T
76 (71, 5, 5, 0)
[ 0 0 21 0]
77 T
82 (77, 5, 5, 0)
[ 0 0 21 0]
ATGATGTGTCCCCTAGCCGCGGAGATTAACAACCTTCTATCTTTCGCCGGCCGTAGTACATCCCTGCTTAGTCTAGATCCAGATTA
idx 10 locidx 505
8 G
13 (8, 5, 5, 0)
[ 0 0 0 20]
12 T
17 (12, 5, 5, 0)
[ 0 0 20 0]
17 G
22 (17, 5, 5, 0)
[ 0 0 0 20]
19 T
24 (19, 5, 5, 0)
[ 0 0 20 0]
37 G
42 (37, 5, 5, 0)
[ 0 0 0 20]
53 G
58 (53, 5, 5, 0)
[ 0 0 0 20]
55 G
60 (55, 5, 5, 0)
[ 0 0 0 20]
ATAACGAAGGTCTTACTGATCAAATTTAGTAGTGACAGGCAGTATCACCCTCAGGGAAGACAACCCCGGCGTCTCGCCAACATGTT
idx 10 locidx 506
66 C
71 (66, 5, 5, 0)
[19 0 0 0]
75 C
80 (75, 5, 5, 0)
[19 0 0 0]
85 G
90 (85, 5, 5, 0)
[ 0 0 0 19]
CGGTCTATCGAGATACAGAGCTGTGCGTTAAATTGTAAGCAGTCTGCTTGGATGCCAAACCTGTTCCACACCACGCATCGTAGTGG
idx 10 locidx 507
32 A
37 (32, 5, 5, 0)
[ 0 18 0 0]
34 C
39 (34, 5, 5, 0)
[18 0 0 0]
TCGGAGCCGGAGCTCTGTATTTATGACTACAGAGCTCCTAGTATAAAGCTCCGACTGTGGGTATTCTCGTTCGCGTAACCTGCAAG
idx 10 locidx 508
0 C
5 (0, 5, 5, 0)
[22 0 0 0]
2 A
7 (2, 5, 5, 0)
[ 0 22 0 0]
22 T
27 (22, 5, 5, 0)
[ 0 0 22 0]
46 C
51 (46, 5, 5, 0)
[22 0 0 0]
56 T
61 (56, 5, 5, 0)
[ 0 0 22 0]
59 T
64 (59, 5, 5, 0)
[ 0 0 22 0]
62 M
67 (62, 5, 5, 0)
[11 11 0 0]
CAAATTTGCCAATACTAAGGAGTAGGAATGAGCTGGGGTTGCAAGTCTAAATAGAATCCTGTMTGCTGACCGCGTGGTTATGTCTC
idx 10 locidx 509
1 C
6 (1, 5, 5, 0)
[22 0 0 0]
13 G
18 (13, 5, 5, 0)
[ 0 0 0 22]
18 T
23 (18, 5, 5, 0)
[ 0 0 22 0]
63 T
68 (63, 5, 5, 0)
[ 0 0 22 0]
70 C
75 (70, 5, 5, 0)
[22 0 0 0]
77 T
82 (77, 5, 5, 0)
[ 0 0 22 0]
CCATTCCCGCACTGCTCATGACTGGTCATAGAGATCCGAGAGCCGTCAGGGTCAGTACTCTGGTAATGCTCGCTGAGTCTGCTGGC
idx 10 locidx 510
12 T
17 (12, 5, 5, 0)
[ 0 0 20 0]
20 R
25 (20, 5, 5, 0)
[ 0 9 0 11]
40 G
45 (40, 5, 5, 0)
[ 0 0 1 19]
43 C
48 (43, 5, 5, 0)
[20 0 0 0]
56 A
61 (56, 5, 5, 0)
[ 0 20 0 0]
68 A
73 (68, 5, 5, 0)
[ 0 20 0 0]
GCCCAGCCGCCCTGAGCACCRTCCACCTAGTCAGCTAGCTGTACTAACCTGCCTAGAGACGAATTTTGAGGAAATAAGGCGCTTTC
idx 10 locidx 511
34 C
39 (34, 5, 5, 0)
[19 0 0 0]
37 A
42 (37, 5, 5, 0)
[ 0 19 0 0]
44 A
49 (44, 5, 5, 0)
[ 0 19 0 0]
58 R
63 (58, 5, 5, 0)
[ 0 10 0 9]
72 G
77 (72, 5, 5, 0)
[ 0 0 0 19]
GTTTCTGCAGTTGGCGCTGACGCCGGGTCGATCCCGAATATAGGAGTAGACCCCCGTARGACGCAAAGCCATGCGTGCAAGGTTCA
idx 10 locidx 512
45 G
50 (45, 5, 5, 0)
[ 0 0 0 18]
63 T
68 (63, 5, 5, 0)
[ 0 0 18 0]
69 G
74 (69, 5, 5, 0)
[ 0 0 0 18]
CTACTTGTAGTCTTTCCACCAGACGTTATATCCGCTGTTACCTGAGACGTAGCTGGACGATGATATAACGTAGACGGTCGATATTT
idx 10 locidx 513
1 A
6 (1, 5, 5, 0)
[ 0 19 0 0]
59 C
64 (59, 5, 5, 0)
[19 0 0 0]
66 T
71 (66, 5, 5, 0)
[ 0 0 19 0]
82 A
87 (82, 5, 5, 0)
[ 0 19 0 0]
GAGCGAAGCAAGGGGATAGTACTTGTACTCGCTAAGAGAGTCCCGCAATAAAATCCCATCTCCTGGTATTCTGTAACGTACCATCG
idx 10 locidx 514
22 C
27 (22, 5, 5, 0)
[18 0 0 0]
45 G
50 (45, 5, 5, 0)
[ 0 0 0 18]
51 A
56 (51, 5, 5, 0)
[ 0 18 0 0]
52 C
57 (52, 5, 5, 0)
[18 0 0 0]
ACCTCCACACATCGTGGGACTTCCCAAGACTATCGAAAGTTGCCTGCGGCAACGAACTGTGAGATCCGCTGAGTCAGTAAGGAAGA
idx 10 locidx 515
30 C
35 (30, 5, 5, 0)
[20 0 0 0]
42 A
47 (42, 5, 5, 0)
[ 0 20 0 0]
46 G
51 (46, 5, 5, 0)
[ 0 0 0 20]
GAGTTTTTAATCGAGTATGTAGCGCGGAAGCAATCCCGCCTAAACTGGGCTATACAATGCGGGATTTTTACGATGATACGCTCAAC
idx 10 locidx 516
6 G
11 (6, 5, 5, 0)
[ 0 0 0 24]
20 T
25 (20, 5, 5, 0)
[ 0 0 24 0]
25 C
30 (25, 5, 5, 0)
[24 0 0 0]
68 T
73 (68, 5, 5, 0)
[ 0 0 24 0]
CTAAGCGGGACAGCACGGCCTACGCCAGTTCAGCGTAACTGAACACACTCTTTGCTAGCCATCGTCGCTTAGAGCGTTTGCACGTA
idx 10 locidx 517
25 G
30 (25, 5, 5, 0)
[ 0 0 0 19]
29 A
34 (29, 5, 5, 0)
[ 0 19 0 0]
30 T
35 (30, 5, 5, 0)
[ 0 0 19 0]
33 T
38 (33, 5, 5, 0)
[ 0 0 19 0]
48 T
53 (48, 5, 5, 0)
[ 0 0 19 0]
65 G
70 (65, 5, 5, 0)
[ 0 0 0 19]
TGTTGGTTTAATGTTACACGCAGTAGAATATGGTAAGAGCGTGCCTGATCAACAGCATGAAGGCGGAGATTTTTCTACATTATTTA
idx 10 locidx 518
25 A
30 (25, 5, 5, 0)
[ 0 20 0 0]
37 G
42 (37, 5, 5, 0)
[ 0 0 0 20]
49 G
54 (49, 5, 5, 0)
[ 0 0 0 20]
69 A
74 (69, 5, 5, 0)
[ 0 20 0 0]
CATAGAAGAGTTAGCGACGGATTGTAACGTTACAGCAGTTAGAAACCTCGTACGTTCCGAGTCCCCCCTAATACGAGCTATCCCGG
idx 10 locidx 519
10 T
15 (10, 5, 5, 0)
[ 0 0 21 0]
31 T
36 (31, 5, 5, 0)
[ 0 0 21 0]
52 G
57 (52, 5, 5, 0)
[ 0 0 0 21]
75 A
80 (75, 5, 5, 0)
[ 0 21 0 0]
GCAGAACAGCTGGCCTACCAGGACTTCCGCTTAACCTAATCGCCCCCATCGGGTCTACTCACGCAACCCCAATGAAACGATCCCTA
idx 10 locidx 520
55 A
60 (55, 5, 5, 0)
[ 0 21 0 0]
57 C
62 (57, 5, 5, 0)
[21 0 0 0]
CAGGCTAAAAATAGTGACTAATGCGGGTCGAAGGGGCCACGACCTCTAGTCTACAACCGAGCAACGATCAGAGAGCTACTTCGATC
idx 10 locidx 521
28 C
33 (28, 5, 5, 0)
[20 0 0 0]
53 T
58 (53, 5, 5, 0)
[ 0 0 20 0]
GGATATACGGCGTTAATTAATCAGAATTCATGTGGCGACAGACTTGCTATGGCTGCGCAAGACACAACGTTTATCGGGGACTGCAG
idx 10 locidx 522
9 T
14 (9, 5, 5, 0)
[ 0 0 17 0]
20 T
25 (20, 5, 5, 0)
[ 0 0 17 0]
55 A
60 (55, 5, 5, 0)
[ 0 17 0 0]
74 G
79 (74, 5, 5, 0)
[ 0 0 0 17]
CGCCTAGACTTGCGGCAATCTGGCCGGTGCCCTACACTCAAAATACGTCCCTCCCATTGTTGTCCCGATAGTCCGGGTCTTTCGAG
idx 10 locidx 523
7 G
12 (7, 5, 5, 0)
[ 0 0 0 16]
9 A
14 (9, 5, 5, 0)
[ 0 16 0 0]
19 G
24 (19, 5, 5, 0)
[ 0 0 0 16]
58 G
63 (58, 5, 5, 0)
[ 0 0 0 16]
81 T
86 (81, 5, 5, 0)
[ 0 0 16 0]
TTAGGCCGAACTATGCTACGTTTCTGGGTGGGCTCTAAAAAAGGTCTTACCGATGTACGTTGCTTCCGCACCGCTGCAGACTCGCT
idx 10 locidx 524
67 T
72 (67, 5, 5, 0)
[ 0 0 14 0]
85 A
90 (85, 5, 5, 0)
[ 0 14 0 0]
GGGGAGCGCCCTTTTCTCTGACTAGGTCTGCCAAAATCTGTTAATAATCGATCGATCTACCCATACGTAGAGGGATGGGTGGTTAA
idx 10 locidx 525
30 A
35 (30, 5, 5, 0)
[ 0 19 0 0]
44 T
49 (44, 5, 5, 0)
[ 0 0 19 0]
51 G
56 (51, 5, 5, 0)
[ 0 0 0 19]
TCTATTCTAGTGCATCAAACAGAGTTCGGGACAGTGAGCGAGCATCTATCTGCCCGGATCGCGAGGTACGACAATCTCATTTCCTG
idx 10 locidx 526
17 C
22 (17, 5, 5, 0)
[11 0 0 0]
36 C
41 (36, 5, 5, 0)
[11 0 0 0]
71 A
76 (71, 5, 5, 0)
[ 0 11 0 0]
CGCGATTCCACAAATCTCCGTATATTTAGAACTCAGCTAAATAGTAACTTCCCCCGTAGTACCTTGAAATAACGTGACGCTGATGG
idx 10 locidx 527
9 C
14 (9, 5, 5, 0)
[19 0 0 0]
24 T
29 (24, 5, 5, 0)
[ 0 0 19 0]
54 C
59 (54, 5, 5, 0)
[19 0 0 0]
58 A
63 (58, 5, 5, 0)
[ 0 19 0 0]
62 A
67 (62, 5, 5, 0)
[ 0 19 0 0]
CGAGCGCTGCTAGTCGGGAACTCCTCTTCCGTGTGCACTAGCTTGTTGTCTCTCCATCAGAGATTGTTCCTGCTACCCGCATTAAG
idx 10 locidx 528
35 T
40 (35, 5, 5, 0)
[ 0 0 18 0]
56 C
61 (56, 5, 5, 0)
[18 0 0 0]
CTACACTCGGATAAAGCCGCGCTCCCGGCAATTGGTGGGTGGAACAACATAACCTTCTCTCGGTATTGATTTGCCCCGATTATCCC
idx 10 locidx 529
2 Y
7 (2, 5, 5, 0)
[10 1 9 0]
66 G
71 (66, 5, 5, 0)
[ 0 0 0 20]
75 A
80 (75, 5, 5, 0)
[ 0 20 0 0]
AGYCCTAGGTTAAGACTCACCTCGGATGCACGGACGATAGATTTCTAATGCCGAACTAGATGGTATGGACCTAACAACACGGTTAG
idx 10 locidx 530
14 C
19 (14, 5, 5, 0)
[20 0 0 0]
45 C
50 (45, 5, 5, 0)
[20 0 0 0]
64 G
69 (64, 5, 5, 0)
[ 0 0 0 20]
67 T
72 (67, 5, 5, 0)
[ 0 0 20 0]
72 C
77 (72, 5, 5, 0)
[20 0 0 0]
79 A
84 (79, 5, 5, 0)
[ 0 20 0 0]
CATGAGTAACCCCCCCCTCTCCGGCTAGCCTGCGATATAGCATGACATTTACAGAATGGTGGCGGTATTTGCCACGGAGAGTGCTA
idx 10 locidx 531
37 A
42 (37, 5, 5, 0)
[ 0 17 0 0]
47 A
52 (47, 5, 5, 0)
[ 0 17 0 0]
55 C
60 (55, 5, 5, 0)
[17 0 0 0]
64 T
69 (64, 5, 5, 0)
[ 0 0 17 0]
65 G
70 (65, 5, 5, 0)
[ 0 0 0 17]
72 A
77 (72, 5, 5, 0)
[ 0 17 0 0]
75 T
80 (75, 5, 5, 0)
[ 0 0 17 0]
78 T
83 (78, 5, 5, 0)
[ 0 0 17 0]
CGCCGGTCAGGGTCTTTCGTTGAAACCGTCAGGCATGAAATCCCCCTACAGAGGTCCGCTTTTCTGACTGCTAAGTTCTGAGTAGG
idx 10 locidx 532
24 C
29 (24, 5, 5, 0)
[16 0 0 0]
25 G
30 (25, 5, 5, 0)
[ 0 0 0 16]
26 G
31 (26, 5, 5, 0)
[ 0 0 0 16]
33 A
38 (33, 5, 5, 0)
[ 0 16 0 0]
40 T
45 (40, 5, 5, 0)
[ 0 0 16 0]
56 C
61 (56, 5, 5, 0)
[16 0 0 0]
62 T
67 (62, 5, 5, 0)
[ 0 0 16 0]
76 G
81 (76, 5, 5, 0)
[ 0 0 0 16]
CGGTTACACAACAACAAAATAGATCGGTAAGTAATCTATATCGCAAACCCAAAGGGCAACTCTGCGGCATACCTAGGCTCATGGGT
idx 10 locidx 533
9 C
14 (9, 5, 5, 0)
[19 0 0 0]
14 G
19 (14, 5, 5, 0)
[ 0 0 0 19]
32 G
37 (32, 5, 5, 0)
[ 0 0 0 19]
37 W
42 (37, 5, 5, 0)
[ 0 9 10 0]
48 G
53 (48, 5, 5, 0)
[ 0 0 0 19]
54 C
59 (54, 5, 5, 0)
[19 0 0 0]
56 Y
61 (56, 5, 5, 0)
[ 9 0 10 0]
81 W
86 (81, 5, 5, 0)
[ 0 9 10 0]
82 G
87 (82, 5, 5, 0)
[ 0 0 0 19]
84 A
89 (84, 5, 5, 0)
[ 0 19 0 0]
85 G
90 (85, 5, 5, 0)
[ 0 0 0 19]
GCATGTGAGCGAGGGAATCCTTAAGTGTCTCGGGGCCWGAATTTATGGGCACGCCAYTGCTGTGCATTAGTAAACCGGCTGWGAAG
idx 10 locidx 534
65 G
70 (65, 5, 5, 0)
[ 0 0 0 22]
TGAACCTGCTGGCAAACCAGTCCGTACCGTCACCAAAGTCACGTAAAGGTAGATCTATAATACCTGCCCTTAATACGTGAGCGGTG
idx 10 locidx 535
1 S
6 (1, 5, 5, 0)
[ 7 0 0 10]
4 C
9 (4, 5, 5, 0)
[17 0 0 0]
7 Y
12 (7, 5, 5, 0)
[ 7 0 10 0]
20 C
25 (20, 5, 5, 0)
[17 0 0 0]
24 C
29 (24, 5, 5, 0)
[17 0 0 0]
35 C
40 (35, 5, 5, 0)
[17 0 0 0]
49 T
54 (49, 5, 5, 0)
[ 0 0 17 0]
55 C
60 (55, 5, 5, 0)
[17 0 0 0]
60 A
65 (60, 5, 5, 0)
[ 0 17 0 0]
71 C
76 (71, 5, 5, 0)
[17 0 0 0]
CSTCCATYAAACAATAGTTACAGTCATTATAGAGCCTTGGGGCCCTCGCTCGCACCGACGACAAACCTGTCCTCGCACCCGGAGCG
idx 10 locidx 536
33 G
38 (33, 5, 5, 0)
[ 0 0 0 25]
36 C
41 (36, 5, 5, 0)
[25 0 0 0]
38 T
43 (38, 5, 5, 0)
[ 0 0 25 0]
72 G
77 (72, 5, 5, 0)
[ 0 0 0 25]
79 T
84 (79, 5, 5, 0)
[ 0 0 25 0]
ACGAGACCGACCGAGGTTGACTATCTAACTGGGGTGCGTATTGACGGCCTAGCAGTACCCACATCGCCCAATGCCTGGCTATCCTA
idx 10 locidx 537
18 C
23 (18, 5, 5, 0)
[20 0 0 0]
50 C
55 (50, 5, 5, 0)
[20 0 0 0]
63 C
68 (63, 5, 5, 0)
[20 0 0 0]
70 T
75 (70, 5, 5, 0)
[ 0 0 20 0]
79 A
84 (79, 5, 5, 0)
[ 0 20 0 0]
GACCAGGAGGGTTAGTTTCCTCTCGCTTTAAGGCGCCACGTCGAGCAAATCGCGAATACCGGACGCTTCGTCCTATGCGACCCTCG
idx 10 locidx 538
14 C
19 (14, 5, 5, 0)
[20 0 0 0]
33 C
38 (33, 5, 5, 0)
[20 0 0 0]
TATAGATGCGGTGGCCGCTATCGAAACTGGCAGCTAGTTTAGATCCCCCCGCAACTA-CTTCGGTAACACCTAGTTCAAAAAGCTTT
idx 10 locidx 539
52 G
57 (52, 5, 5, 0)
[ 0 0 0 17]
69 G
74 (69, 5, 5, 0)
[ 0 0 0 17]
70 T
75 (70, 5, 5, 0)
[ 0 0 17 0]
AGAAACATTTATAAACAAATGACAGCTCTATACTGTAGTTACATCAGTAGGCGACAGGGGAGTCTAATTGTGCTTGGGGCCTGACT
idx 10 locidx 540
16 A
21 (16, 5, 5, 0)
[ 0 21 0 0]
17 G
22 (17, 5, 5, 0)
[ 0 0 0 21]
21 T
26 (21, 5, 5, 0)
[ 0 0 21 0]
37 C
42 (37, 5, 5, 0)
[21 0 0 0]
79 G
84 (79, 5, 5, 0)
[ 0 0 0 21]
84 C
89 (84, 5, 5, 0)
[21 0 0 0]
TTAAGCACAGCAACACAGTCGTTAGCTCGTTAATGTCCTCATGTTGTAGGCGGTTAATTTCCATTTGCTTGAGAAAGCCGTGACCC
idx 10 locidx 541
56 T
61 (56, 5, 5, 0)
[ 0 0 23 0]
79 T
84 (79, 5, 5, 0)
[ 0 0 23 0]
GTGACAGACGCGGCCTCCTGCGTCAACGGCCGATTGTTCAGTGTCCAGCGGCTACTTCATATTAGAATGACAAGGAATGTTATTTT
idx 10 locidx 542
13 C
18 (13, 5, 5, 0)
[21 0 0 0]
20 A
25 (20, 5, 5, 0)
[ 0 21 0 0]
45 T
50 (45, 5, 5, 0)
[ 0 0 21 0]
48 T
53 (48, 5, 5, 0)
[ 0 0 21 0]
53 G
58 (53, 5, 5, 0)
[ 0 0 0 21]
74 G
79 (74, 5, 5, 0)
[ 0 0 0 21]
TCGCTACTAGCTACCGATGAAATTCACGTGAGGCTCATGTTGGCTTTATGATAGATTCCGTATCGGTCTATCGGGGAAGTACGTGA
idx 10 locidx 543
62 G
67 (62, 5, 5, 0)
[ 0 0 0 21]
65 A
70 (65, 5, 5, 0)
[ 0 21 0 0]
CTGCGGTAGTTAACGAACAGCCTGTCTTGTCTAAAGGGTTAAAAATCAGGTCCGGTGTACAGGCGACGATAGAGAACCCCGGCCTA
idx 10 locidx 544
0 C
5 (0, 5, 5, 0)
[20 0 0 0]
27 G
32 (27, 5, 5, 0)
[ 0 0 0 20]
30 A
35 (30, 5, 5, 0)
[ 0 20 0 0]
41 A
46 (41, 5, 5, 0)
[ 0 20 0 0]
71 A
76 (71, 5, 5, 0)
[ 0 20 0 0]
85 T
90 (85, 5, 5, 0)
[ 0 0 20 0]
CCAACTGGGCGTCGCCATGTTCCTGATGTGAGTATAAACTGAGGAAAATTCCAGTTGATCGCACGCTACAAACCAAAAGTATAGTT
idx 10 locidx 545
57 A
62 (57, 5, 5, 0)
[ 0 17 0 0]
60 C
65 (60, 5, 5, 0)
[17 0 0 0]
TTCCGCTCACACGATATTAGAGGGGCCGTGCCCGCCTAAACTCCGGTAGAGTACCCTACGCTTTATCTACCCTTGGTTATTCCGAC
idx 10 locidx 546
44 A
49 (44, 5, 5, 0)
[ 0 23 0 0]
80 G
85 (80, 5, 5, 0)
[ 0 0 0 23]
CTACTTAAAACCAACACTTTTCTTCGGGGCACACTGCAGCATCGAAGCCGCTACACCCACGGCCGGAACTTTGAAAGGTGGCGACC
idx 10 locidx 547
25 A
30 (25, 5, 5, 0)
[ 0 21 0 0]
33 M
38 (33, 5, 5, 0)
[13 8 0 0]
49 C
54 (49, 5, 5, 0)
[21 0 0 0]
62 G
67 (62, 5, 5, 0)
[ 0 0 0 21]
67 A
72 (67, 5, 5, 0)
[ 0 21 0 0]
ACTTGACGTTGAGATGGTGGGACGTATGGTACGMACACAATCCAAAAAACGTCGAGGATTCGGTACTATGGCTTTCTAGCAGCACC
idx 10 locidx 548
27 C
32 (27, 5, 5, 0)
[23 0 0 0]
31 A
36 (31, 5, 5, 0)
[ 0 23 0 0]
69 G
74 (69, 5, 5, 0)
[ 0 0 0 23]
72 C
77 (72, 5, 5, 0)
[23 0 0 0]
GTGTGGTGTATGTACGTGAGGCCATTTCTTAAGCTACAAGGTGTTAAGACGAGCGCGGAATTCAACCTTGGACTTATTGCAGCAGT
idx 10 locidx 549
13 C
18 (13, 5, 5, 0)
[19 0 0 0]
14 A
19 (14, 5, 5, 0)
[ 0 19 0 0]
22 G
27 (22, 5, 5, 0)
[ 0 0 0 19]
29 G
34 (29, 5, 5, 0)
[ 0 0 0 19]
CGCCCCCAAATTGCAGCGTACGGGGCCATGGCCGATGCTTGAACATGATCAGCGGTATTTAAGTAAGAATTTAACGATGCCCTGGC
idx 11 locidx 550
5 C
10 (5, 5, 5, 0)
[16 0 0 0]
23 A
28 (23, 5, 5, 0)
[ 0 16 0 0]
38 G
43 (38, 5, 5, 0)
[ 0 0 0 16]
72 G
77 (72, 5, 5, 0)
[ 0 0 0 16]
81 A
86 (81, 5, 5, 0)
[ 0 16 0 0]
TAAGGCAGTCATCTTTTTCAGCAACCCTCCGAGCCGAAGCAGTTCTCTCAATTATTGGTACTGAGCAATTGAGAGGCATCCACCCT
idx 11 locidx 551
40 G
45 (40, 5, 5, 0)
[ 0 0 0 21]
52 T
57 (52, 5, 5, 0)
[ 0 0 21 0]
GGAGTTGTTTGCTAATCCTCACGCTGTTGTCCGCTTTAGTGTCTTCAACGATTCCGGCCTAATTGCCCTGACGACATGCCGTCGCC
idx 11 locidx 552
29 C
34 (29, 5, 5, 0)
[16 0 0 0]
41 T
46 (41, 5, 5, 0)
[ 0 0 16 0]
65 A
70 (65, 5, 5, 0)
[ 0 16 0 0]
ATTACCGAAGCTCCTGGGAGACTGAACCACCAAGAAAGCGATCCGAAAACATTGGGGCGTGGGATAAACCAATGTTTGAACCGTTG
idx 11 locidx 553
3 T
8 (3, 5, 5, 0)
[ 0 0 23 0]
4 A
9 (4, 5, 5, 0)
[ 0 23 0 0]
21 T
26 (21, 5, 5, 0)
[ 0 0 23 0]
38 A
43 (38, 5, 5, 0)
[ 0 23 0 0]
65 A
70 (65, 5, 5, 0)
[ 0 23 0 0]
CATTAATAACACAAGACCCCATAGTCATATCCGAAGTTAAGCAATCGTTAGGTGCTTATTGCAGAATCGCATTTTGGATCTTCTCG
idx 11 locidx 554
2 C
7 (2, 5, 5, 0)
[19 0 0 0]
44 T
49 (44, 5, 5, 0)
[ 0 0 19 0]
81 A
86 (81, 5, 5, 0)
[ 0 19 0 0]
TACAGGGCTGCATGTGGAGGCTAGGGGACAGAGGTACCCGCGAATTACAGCGAATTTATCCTGAGCTTGGCCCGGGTGAGCAAGAC
idx 11 locidx 555
7 T
12 (7, 5, 5, 0)
[ 0 0 18 0]
28 T
33 (28, 5, 5, 0)
[ 0 0 18 0]
60 G
65 (60, 5, 5, 0)
[ 0 0 0 18]
CTACCGGTCAGTTGCACATCCGTCTATGTAATGTAGCGAATTTCATGAATCTAATCGTCCGCCCCTACGGATTAAAGGTTTATAGT
idx 11 locidx 556
26 A
31 (26, 5, 5, 0)
[ 0 22 0 0]
69 C
74 (69, 5, 5, 0)
[22 0 0 0]
72 A
77 (72, 5, 5, 0)
[ 0 22 0 0]
CTGAAACATACGTTAGTTCCAAACTCAGTATAATGATAGATTAAATGTTGTAATGGACCTAGGTCACGGCACACTACGGCGCTCGT
idx 11 locidx 557
32 A
37 (32, 5, 5, 0)
[ 0 21 0 0]
69 A
74 (69, 5, 5, 0)
[ 0 21 0 0]
AGGCCTGTCAAGCAGCTGGGTACCGCATTTAGAACCGGGTGTTCCCAGCGAACGCTTAAACCTGCCGCCAGAATGACAAGTAAGTA
idx 11 locidx 558
32 G
37 (32, 5, 5, 0)
[ 0 0 0 18]
57 C
62 (57, 5, 5, 0)
[18 0 0 0]
61 A
66 (61, 5, 5, 0)
[ 0 18 0 0]
78 C
83 (78, 5, 5, 0)
[18 0 0 0]
CAGTTCAAGGAGTAGCATATCGTAAAGTCTCTGGGTTAGGCCTTGAAGTTCCCGATGCGTAACTTACCTCTTGTATCCCAGAAGGG
idx 11 locidx 559
41 T
46 (41, 5, 5, 0)
[ 0 0 23 0]
57 A
62 (57, 5, 5, 0)
[ 0 23 0 0]
CAAGAGAGTTCTGTCTGGGCCGGAAGGTCCCCTGAACAGCCTGGAAGAGAAGGTACGACCTTGTAGTAATCACACAAGGGATAGTT
idx 11 locidx 560
16 G
21 (16, 5, 5, 0)
[ 0 0 0 18]
33 A
38 (33, 5, 5, 0)
[ 0 18 0 0]
72 R
77 (72, 5, 5, 0)
[ 0 11 0 7]
77 T
82 (77, 5, 5, 0)
[ 0 0 18 0]
ACGAAATTGCAGGAGTGCTGCTGTAGTATCGTAAGCATCCGCAACCAGCAGACCGAAAGATATGCTGGACATRATTGTATTGATGG
idx 11 locidx 561
11 G
16 (11, 5, 5, 0)
[ 0 0 0 22]
18 A
23 (18, 5, 5, 0)
[ 0 22 0 0]
22 G
27 (22, 5, 5, 0)
[ 0 0 0 22]
41 A
46 (41, 5, 5, 0)
[ 0 22 0 0]
63 A
68 (63, 5, 5, 0)
[ 0 22 0 0]
66 T
71 (66, 5, 5, 0)
[ 0 0 22 0]
81 C
86 (81, 5, 5, 0)
[22 0 0 0]
GAGTCGGCCTAGGCAGCTATTAGAGCAACGCAATCTTGGCGACTCAATTCCCCTGGCCCCACTATGTACGATCGCACGAGCCGGAT
idx 11 locidx 562
25 C
30 (25, 5, 5, 0)
[22 0 0 0]
49 C
54 (49, 5, 5, 0)
[22 0 0 0]
52 T
57 (52, 5, 5, 0)
[ 0 0 22 0]
54 C
59 (54, 5, 5, 0)
[22 0 0 0]
ATACAGCGTATCACAGTGTAGATCACGAAGGACTTCTTACTCGAGTACTCATTCCCCGATTCTAGTTGTTCGTGCGGCCGGACGGA
idx 11 locidx 563
27 A
32 (27, 5, 5, 0)
[ 0 17 0 0]
32 T
37 (32, 5, 5, 0)
[ 0 0 17 0]
45 A
50 (45, 5, 5, 0)
[ 0 17 0 0]
60 G
65 (60, 5, 5, 0)
[ 0 0 0 17]
64 G
69 (64, 5, 5, 0)
[ 0 0 0 17]
83 T
88 (83, 5, 5, 0)
[ 0 0 17 0]
AGCCTAACGATGCCGTATCCTAGCTAAATTCGTCGTGTGATCGCGAGTGCTTCCAACGGAGTATGCCTGGGTCTTAGACAAGCTTA
idx 11 locidx 564
1 T
6 (1, 5, 5, 0)
[ 0 0 19 0]
28 A
33 (28, 5, 5, 0)
[ 0 19 0 0]
41 A
46 (41, 5, 5, 0)
[ 0 19 0 0]
59 G
64 (59, 5, 5, 0)
[ 0 0 0 19]
CTGGGATCAGGCAATAGAACGGTTCAAAAGTCGTATATTCTAAATCGCGAACGGTTCATGATATTGGGGCTTAACGTCAGTGATTG
idx 11 locidx 565
59 T
64 (59, 5, 5, 0)
[ 0 0 19 0]
AGTGTATTCGAGCCTAACGAATAGATGCAGGAACGTCTTCTTGTCGGTGCTCAACCGGTTCCGGCACCTCGCCACACAAGAGGAGT
idx 11 locidx 566
11 G
16 (11, 5, 5, 0)
[ 0 0 0 19]
13 A
18 (13, 5, 5, 0)
[ 0 19 0 0]
18 G
23 (18, 5, 5, 0)
[ 0 0 0 19]
42 T
47 (42, 5, 5, 0)
[ 0 0 19 0]
50 T
55 (50, 5, 5, 0)
[ 0 0 19 0]
52 T
57 (52, 5, 5, 0)
[ 0 0 19 0]
65 G
70 (65, 5, 5, 0)
[ 0 0 0 19]
78 T
83 (78, 5, 5, 0)
[ 0 0 19 0]
AAAGGACCTCGGAATTTAGCGTGATTGTAGGTCAACAAGTTATAGTTGTGTTTGCCACGTCGGCGGACGCGAGTATCTTCGAGACA
idx 11 locidx 567
1 T
6 (1, 5, 5, 0)
[ 0 0 18 0]
55 C
60 (55, 5, 5, 0)
[18 0 0 0]
ATGCTGAGTTCGGCCGGTTCCCTCTCTCAAATAATAAAGTCGCAGTAGCCTGCACCCCTCATTGCAAGCTTGCCAATCGTTGCTCT
idx 11 locidx 568
0 T
5 (0, 5, 5, 0)
[ 0 0 14 0]
8 C
13 (8, 5, 5, 0)
[14 0 0 0]
16 C
21 (16, 5, 5, 0)
[14 0 0 0]
20 G
25 (20, 5, 5, 0)
[ 0 0 0 14]
41 G
46 (41, 5, 5, 0)
[ 0 0 0 14]
43 C
48 (43, 5, 5, 0)
[14 0 0 0]
59 G
64 (59, 5, 5, 0)
[ 0 0 0 14]
67 A
72 (67, 5, 5, 0)
[ 0 14 0 0]
TCTGTACTCTACAATACCCCGGATACAGGTGCACATAAACAGCCTATGCTGATCTACTGGATCTGAGAGCCATAACCCAAATGACG
idx 11 locidx 569
18 G
23 (18, 5, 5, 0)
[ 0 0 0 21]
37 G
42 (37, 5, 5, 0)
[ 0 0 0 21]
50 G
55 (50, 5, 5, 0)
[ 0 0 0 21]
58 C
63 (58, 5, 5, 0)
[21 0 0 0]
CGCAGAACCAGATAACGGGCAGGACACTCGAGCCACTGAATAATGTGGATGAGCCTCTCTCAACCCGCTGATTCGTGATCATACGC
idx 11 locidx 570
10 T
15 (10, 5, 5, 0)
[ 0 0 20 0]
20 A
25 (20, 5, 5, 0)
[ 0 20 0 0]
CTAATAGGTTTGTTGCAAACATCCTTCATTCTTCTGTAGTGTCAATCCTCACAGTAGCACCTGGGGAGCTGGCGAATACATATTTG
idx 11 locidx 571
45 C
50 (45, 5, 5, 0)
[19 0 0 0]
CTGAGGATGTCAGGGGCGGTAACTATGTTTTTCGTCGCGTAAGTGCGAATGCGCGTCAACGACCCTACGATGACGAGATAGGAGTC
idx 11 locidx 572
4 A
9 (4, 5, 5, 0)
[ 0 21 0 0]
26 G
31 (26, 5, 5, 0)
[ 0 0 0 21]
51 A
56 (51, 5, 5, 0)
[ 0 21 0 0]
CGCCAGGCTGCTCCGTCGCTTTAGAGGGCCGCGAGCTCGTCCGAGCTCGTTACATTAGTCCTAGTGCATCAAGAAGCAACTAGCAA
idx 11 locidx 573
21 A
26 (21, 5, 5, 0)
[ 0 19 0 0]
GGTCGGCCCCCCTTCCTTTAAACGTATGTGGACCGAGGAGGTAGCTTGAATTGCATTAGCGTAGAGAAGATTCGTGGGAAGGGTCA
idx 11 locidx 574
5 C
10 (5, 5, 5, 0)
[21 0 0 0]
6 T
11 (6, 5, 5, 0)
[ 0 0 21 0]
34 A
39 (34, 5, 5, 0)
[ 0 21 0 0]
TTATTCTGAGGCACGCGAAAGAGTATTGTGGATTATAAGGTGTTCAGTGTTTGACCACTGTGTGGCGAATAGCAACTTAATATTCG
idx 11 locidx 575
3 A
8 (3, 5, 5, 0)
[ 0 18 0 0]
7 A
12 (7, 5, 5, 0)
[ 0 18 0 0]
40 A
45 (40, 5, 5, 0)
[ 0 18 0 0]
41 C
46 (41, 5, 5, 0)
[18 0 0 0]
GGGATATAAGGTGTAGGTATGTTGTTCTTCTTCATTAGTTACTCTGCCCCCTAAGTAGTCAGAGGGCCTCAGGGCCCGACGTTCGG
idx 11 locidx 576
9 A
14 (9, 5, 5, 0)
[ 0 24 0 0]
38 C
43 (38, 5, 5, 0)
[24 0 0 0]
39 G
44 (39, 5, 5, 0)
[ 0 0 0 24]
49 A
54 (49, 5, 5, 0)
[ 0 24 0 0]
ACCGCATTCATGTTCTCAGCGTCGCTTACGGAGCCTGCCGGCTTGTGTGACCATAAGTGGCTCCCTTACTCGTAAGCTTATTTAGA
idx 11 locidx 577
1 G
6 (1, 5, 5, 0)
[ 0 0 0 22]
TGTGACCCCCACGTTAACCTACGTATTGCGCTGCTCTAGTACCGTGGCATGTGTGAAGGGTATTATGATTGATGGATTGCAAGACA
idx 11 locidx 578
28 G
33 (28, 5, 5, 0)
[ 0 0 0 20]
GCTCGAACTTGTACCCTCATTTCGAGCCGATTTCCCCCTCAAGTAGTAGAGTCTGGAGTACGCACGAGAAAGCTCTAGTATAGGTC
idx 11 locidx 579
3 G
8 (3, 5, 5, 0)
[ 0 0 0 16]
20 T
25 (20, 5, 5, 0)
[ 0 0 16 0]
49 G
54 (49, 5, 5, 0)
[ 0 0 0 16]
64 C
69 (64, 5, 5, 0)
[16 0 0 0]
77 T
82 (77, 5, 5, 0)
[ 0 0 16 0]
GCGGGTTATGTACCACCCTTTGGAAACTTTCTAGGTCATGCCGTGCGGAGCTCAGATCACGTACCCGAGGCCCTGAGTCTTTCTGC
idx 11 locidx 580
3 A
8 (3, 5, 5, 0)
[ 0 21 0 0]
23 C
28 (23, 5, 5, 0)
[21 0 0 0]
43 T
48 (43, 5, 5, 0)
[ 0 0 21 0]
60 T
65 (60, 5, 5, 0)
[ 0 0 21 0]
77 G
82 (77, 5, 5, 0)
[ 0 0 0 21]
TGCACACCACCATCCGTGTCAACCTGATCCGTTATAGGGTTTTTTGCGTAAAAGCGGTAGTGCGTCCACCCGCCGTAGGACTCTAA
idx 11 locidx 581
48 A
53 (48, 5, 5, 0)
[ 0 19 0 0]
55 G
60 (55, 5, 5, 0)
[ 0 0 0 19]
84 A
89 (84, 5, 5, 0)
[ 0 19 0 0]
CTGACCATATAGTAATTTCCCCAAGGATAAGAGGTTATGGCACACGTCACCTTAAGACTATACAAATGCGAACAGTTAGCCTCAAT
idx 11 locidx 582
3 T
8 (3, 5, 5, 0)
[ 0 0 24 0]
40 C
45 (40, 5, 5, 0)
[24 0 0 0]
56 T
61 (56, 5, 5, 0)
[ 0 0 24 0]
57 T
62 (57, 5, 5, 0)
[ 0 0 24 0]
60 T
65 (60, 5, 5, 0)
[ 0 0 24 0]
61 G
66 (61, 5, 5, 0)
[ 0 0 0 24]
65 T
70 (65, 5, 5, 0)
[ 0 0 24 0]
73 G
78 (73, 5, 5, 0)
[ 0 0 0 24]
81 T
86 (81, 5, 5, 0)
[ 0 0 24 0]
GGCTATCGTTCAAGGTTAGCCGGTTAATGTGTTTGCTAGTCCCAATTCTTAACGGATTTTTGAAATTGTTGCGGATAGACGTTGTT
idx 11 locidx 583
10 C
15 (10, 5, 5, 0)
[18 0 0 0]
20 C
25 (20, 5, 5, 0)
[18 0 0 0]
45 G
50 (45, 5, 5, 0)
[ 0 0 0 18]
68 G
73 (68, 5, 5, 0)
[ 0 0 0 18]
CCCGACCAGACTTGGTGCCCCTGTTTGTTAAGTACTGCGAGCGATGACCGTTCCTGGTAGCAACGATAGCGATTATGCGCACCTCA
idx 11 locidx 584
26 A
31 (26, 5, 5, 0)
[ 0 18 0 0]
72 S
77 (72, 5, 5, 0)
[11 0 0 7]
83 G
88 (83, 5, 5, 0)
[ 0 0 0 18]
CGCGTCTAGAAAGCCAAATAAAACTGATTTAGTGACAAGTTCGCTATGGGCTGTCTAGCAACATATGTAACASGCACAAGTAAGTC
idx 11 locidx 585
35 C
40 (35, 5, 5, 0)
[18 0 0 0]
48 C
53 (48, 5, 5, 0)
[18 0 0 0]
85 T
90 (85, 5, 5, 0)
[ 0 0 18 0]
CCCGACACTGTCTCATAGATCACAGCTTAATCAGCCCGGTAACATAGTCTCATGCCTTCAAGGTAAAAACTAAGATCTGTGTAAGT
idx 11 locidx 586
35 A
40 (35, 5, 5, 0)
[ 0 24 0 0]
42 G
47 (42, 5, 5, 0)
[ 0 0 0 24]
82 T
87 (82, 5, 5, 0)
[ 0 0 24 0]
TGTCCCTATGTATCGGGCTGGTCAGTCGTCATCGAAGTGCCGGGGTTGGCGTCTTTCCTCCGTAACCGACGGATACACGGTTTTTG
idx 11 locidx 587
9 T
14 (9, 5, 5, 0)
[ 0 0 23 0]
36 T
41 (36, 5, 5, 0)
[ 0 0 23 0]
79 A
84 (79, 5, 5, 0)
[ 0 23 0 0]
81 T
86 (81, 5, 5, 0)
[ 0 0 23 0]
GGTCTGCGCTCATCCATCGATATCACGCCTTACTAGTTGAAAATAACGATGATAAACGGTCGTTCCCCACGGTCAGTTAAATGGAA
NOT HERE
idx 11 locidx 589
3 G
8 (3, 5, 5, 0)
[ 0 0 0 14]
11 T
16 (11, 5, 5, 0)
[ 0 0 14 0]
15 T
20 (15, 5, 5, 0)
[ 0 0 14 0]
33 C
38 (33, 5, 5, 0)
[14 0 0 0]
45 C
50 (45, 5, 5, 0)
[14 0 0 0]
76 T
81 (76, 5, 5, 0)
[ 0 0 14 0]
79 G
84 (79, 5, 5, 0)
[ 0 0 0 14]
CTAGTACGTTATACGTAGCCAATGGGAACCTGGCCGTCCGTTGCACGTGACTACAATGCTATCTTCTCAAATAACGTGTGATACAG
idx 11 locidx 590
5 T
10 (5, 5, 5, 0)
[ 0 0 18 0]
17 T
22 (17, 5, 5, 0)
[ 0 0 18 0]
49 C
54 (49, 5, 5, 0)
[18 0 0 0]
74 A
79 (74, 5, 5, 0)
[ 0 18 0 0]
GCGTCTTGTGATGTTACTATTATTTTTTGTCAGATGGGCTCTGATTACACAGGTGCTCCTAGAATAGGGTTAAGATCGCATAGTGA
idx 11 locidx 591
15 A
20 (15, 5, 5, 0)
[ 0 20 0 0]
47 C
52 (47, 5, 5, 0)
[20 0 0 0]
64 K
69 (64, 5, 5, 0)
[ 0 0 11 9]
GCTTGCCTATTAATCAACAAACGGAGTACAGGTACCACCGAACTTGCCATTCCTAAATATGAGTKTACGAGCGGAGAGAACTCCAA
idx 11 locidx 592
12 T
17 (12, 5, 5, 0)
[ 0 0 19 0]
60 G
65 (60, 5, 5, 0)
[ 0 0 0 19]
78 C
83 (78, 5, 5, 0)
[19 0 0 0]
79 C
84 (79, 5, 5, 0)
[19 0 0 0]
TGACAGGGCTCATCGGAGGTTTAGTTCCGTGTGCTTGGTCACGTCGATACCTCTATGCCAGCTGTAAGCTCAGGTTATCCTCTCCG
idx 11 locidx 593
6 C
11 (6, 5, 5, 0)
[24 0 0 0]
13 G
18 (13, 5, 5, 0)
[ 0 0 0 24]
18 T
23 (18, 5, 5, 0)
[ 0 0 24 0]
25 T
30 (25, 5, 5, 0)
[ 0 0 24 0]
65 T
70 (65, 5, 5, 0)
[ 0 0 24 0]
80 A
85 (80, 5, 5, 0)
[ 0 24 0 0]
CGGACGCCAGCGTGTCGTTGCCCACTGTGCTGATGAACCACTGGACATGGTAGCTGCGAGTCGGGTATCGACGTGGGACAAACTCG
idx 11 locidx 594
28 T
33 (28, 5, 5, 0)
[ 0 1 16 0]
53 G
58 (53, 5, 5, 0)
[ 0 0 0 17]
ACGATTACAGGCAGTGTTAAACGCTACTTACTGGATTACAACTGATCGCCTAAGACGTTGATCAGATGGGTCACATATTCAGGGCC
idx 11 locidx 595
23 G
28 (23, 5, 5, 0)
[ 0 0 0 17]
40 G
45 (40, 5, 5, 0)
[ 0 0 0 17]
65 C
70 (65, 5, 5, 0)
[17 0 0 0]
81 G
86 (81, 5, 5, 0)
[ 0 0 0 17]
TTATGCTTCATGAAGCAAAGTAAGTATAGCCGGACCCTTGGCCTAGGAGAACGATCAGCCACGATCGGACACTACTACGATGGACA
idx 11 locidx 596
4 G
9 (4, 5, 5, 0)
[ 0 0 0 22]
19 T
24 (19, 5, 5, 0)
[ 0 0 22 0]
65 T
70 (65, 5, 5, 0)
[ 0 0 22 0]
71 C
76 (71, 5, 5, 0)
[22 0 0 0]
GGTGGAGCTGCCTATCAATTCGGTATAGATCGGGTCGAGTAGAGAAGCACAGTAAGACCCTAATATTACAGCACGCTCTTAGCCGG
idx 11 locidx 597
7 A
12 (7, 5, 5, 0)
[ 0 27 0 0]
22 C
27 (22, 5, 5, 0)
[27 0 0 0]
37 C
42 (37, 5, 5, 0)
[27 0 0 0]
38 T
43 (38, 5, 5, 0)
[ 0 0 27 0]
39 G
44 (39, 5, 5, 0)
[ 0 0 0 27]
40 G
45 (40, 5, 5, 0)
[ 0 0 0 27]
70 T
75 (70, 5, 5, 0)
[ 0 0 27 0]
85 G
90 (85, 5, 5, 0)
[ 0 0 0 27]
GGAGGAGAGCTTAAGTTGAGCGCAATCGTCCTCCGCACTGGTCTCGACCTCCCCCGAACTCTAGTTCTGATTCAAAGGTCCTCGTG
idx 11 locidx 598
20 C
25 (20, 5, 5, 0)
[18 0 0 0]
25 C
30 (25, 5, 5, 0)
[18 0 0 0]
29 A
34 (29, 5, 5, 0)
[ 0 18 0 0]
36 T
41 (36, 5, 5, 0)
[ 0 0 18 0]
59 G
64 (59, 5, 5, 0)
[ 0 0 0 18]
62 G
67 (62, 5, 5, 0)
[ 0 0 0 18]
67 G
72 (67, 5, 5, 0)
[ 0 0 0 18]
84 C
89 (84, 5, 5, 0)
[18 0 0 0]
AGTTAGGTATGTTGAGTTAACCTGCCCCAAGACATATGAACGAACTGTCCTGTTTCTGGGTAGTATGGGACGTGGCTAGATTGCCT
idx 11 locidx 599
25 C
30 (25, 5, 5, 0)
[21 0 0 0]
45 M
50 (45, 5, 5, 0)
[11 10 0 0]
49 G
54 (49, 5, 5, 0)
[ 0 0 0 21]
66 C
70 (66, 5, 5, 1)
[21 0 0 0]
AGCAGTTAACAGCTGTAAACTCTCACCCCATGCTGAGGCTGGCATMCACGTGGATAGAGTGAT-ACCGCTAATGGCGTTGTATCAT
idx 12 locidx 600
22 A
27 (22, 5, 5, 0)
[ 0 23 0 0]
37 A
42 (37, 5, 5, 0)
[ 0 23 0 0]
53 C
58 (53, 5, 5, 0)
[23 0 0 0]
72 T
77 (72, 5, 5, 0)
[ 0 0 23 0]
TAACTTAGACGGGCATTGCACGATCTTTAGTACTGTGAGCAGCTTCCCTACACCCAGTACCGGAAGTAGTTCTTCCTGTGTTTAGC
idx 12 locidx 601
16 C
21 (16, 5, 5, 0)
[22 0 0 0]
26 T
31 (26, 5, 5, 0)
[ 0 0 22 0]
62 G
67 (62, 5, 5, 0)
[ 0 0 0 22]
67 T
72 (67, 5, 5, 0)
[ 0 0 22 0]
79 T
84 (79, 5, 5, 0)
[ 0 0 22 0]
TTACGACGGTATGTGGCCCGTTGTTATGAAATGGCGGCAGGTTAGCATTACGGGGGCCTCGAGTATATTAATATTTTCCTTCGTAA
idx 12 locidx 602
8 T
13 (8, 5, 5, 0)
[ 0 0 10 0]
10 C
15 (10, 5, 5, 0)
[10 0 0 0]
25 A
30 (25, 5, 5, 0)
[ 0 10 0 0]
AGGCATTTTCCAGTAACGGAGCCAGATATTGGAATAGGAGAGAGCCACTCCAATCTGGGTCAGTTGCAGACGTTTTCCTGGCTTCC
idx 12 locidx 603
11 T
16 (11, 5, 5, 0)
[ 0 0 24 0]
28 T
33 (28, 5, 5, 0)
[ 0 0 24 0]
29 G
34 (29, 5, 5, 0)
[ 0 0 0 24]
CGAGCTGTGTGTTCTCTGGAACCGGCCTTGGCCTGATGAGGTGACTACGGGATCTTGATGTCTGCTTCTCTAGTCGAAGAGGTGAG
idx 12 locidx 604
4 C
9 (4, 5, 5, 0)
[20 0 0 0]
43 T
48 (43, 5, 5, 0)
[ 0 0 20 0]
CGGTCAGCCCCCCCGTCATAACGGGTCTGAGCTTGGCTCATGTTGAGGCTTGGAACTCACAATTTAGGGCTACACTGAGTTAGTGA
idx 12 locidx 605
5 G
10 (5, 5, 5, 0)
[ 0 0 0 25]
6 A
11 (6, 5, 5, 0)
[ 0 25 0 0]
39 G
44 (39, 5, 5, 0)
[ 0 0 0 25]
63 C
68 (63, 5, 5, 0)
[25 0 0 0]
67 C
72 (67, 5, 5, 0)
[25 0 0 0]
CTAACGAACGCGCCTGAGGGCTTGGGGCTTTCGATGTGGGGGGGTCCCCTTGGTCGCCGTGGTCGTACTTCGTGGCTACCGCCCGG
idx 12 locidx 606
28 C
33 (28, 5, 5, 0)
[18 0 0 0]
55 C
60 (55, 5, 5, 0)
[18 0 0 0]
71 A
76 (71, 5, 5, 0)
[ 0 18 0 0]
AAGGTTTCCCACGTATTTCGGGCCGAGGCTCCGAGATATTCCGAGATCACGAACACGGTAATTTGCTGAAGAGCCCCTGTAAAGTA
idx 12 locidx 607
12 G
17 (12, 5, 5, 0)
[ 0 0 0 17]
22 C
27 (22, 5, 5, 0)
[17 0 0 0]
24 A
29 (24, 5, 5, 0)
[ 0 17 0 0]
30 T
35 (30, 5, 5, 0)
[ 0 0 17 0]
80 C
85 (80, 5, 5, 0)
[17 0 0 0]
TGCCGGGTACTAGGACTGTTCTCTAGCATATCGGTGTTTGGTCCTCACAGAGCACCAAAGGTAGGCGGCCAGACCTCATCCTTACG
idx 12 locidx 608
7 G
12 (7, 5, 5, 0)
[ 0 0 0 21]
17 T
22 (17, 5, 5, 0)
[ 0 1 20 0]
38 C
43 (38, 5, 5, 0)
[21 0 0 0]
39 T
44 (39, 5, 5, 0)
[ 0 0 21 0]
55 C
60 (55, 5, 5, 0)
[21 0 0 0]
69 A
74 (69, 5, 5, 0)
[ 0 21 0 0]
74 A
79 (74, 5, 5, 0)
[ 0 21 0 0]
84 C
89 (84, 5, 5, 0)
[21 0 0 0]
ACGTAACGATTCAATGTTCGCCTTGCCTTTCGTCAGACCTAACCGTACCGGAAACCGACCGATAGAATTATGGCATTTGGAACTCT
idx 12 locidx 609
45 C
50 (45, 5, 5, 0)
[20 0 0 0]
65 G
70 (65, 5, 5, 0)
[ 0 0 0 20]
67 A
72 (67, 5, 5, 0)
[ 0 20 0 0]
75 C
80 (75, 5, 5, 0)
[20 0 0 0]
83 G
88 (83, 5, 5, 0)
[ 0 0 0 20]
TCACCAAAGTTTCATAGAGACAGTCGATTTGAACCCTGGGCATGACCCACCATTTAGAGTGGGTAGCAAACCCGACCACACGTGGA
idx 12 locidx 610
3 T
8 (3, 5, 5, 0)
[ 0 0 17 0]
7 T
12 (7, 5, 5, 0)
[ 0 0 17 0]
17 G
22 (17, 5, 5, 0)
[ 0 0 0 17]
18 C
23 (18, 5, 5, 0)
[17 0 0 0]
24 T
29 (24, 5, 5, 0)
[ 0 0 17 0]
29 A
34 (29, 5, 5, 0)
[ 0 17 0 0]
51 A
56 (51, 5, 5, 0)
[ 0 17 0 0]
68 T
73 (68, 5, 5, 0)
[ 0 0 16 1]
70 G
75 (70, 5, 5, 0)
[ 0 0 0 17]
AGTTTCCTAAACCCCAGGCTTTGGTTAAGATGCGGTCCGCGATCGCCGAGAAGTTGCCAAAGCGTAGCTAGCGGATCCGAGCATTC
idx 12 locidx 611
7 A
12 (7, 5, 5, 0)
[ 0 17 0 0]
26 A
31 (26, 5, 5, 0)
[ 0 17 0 0]
28 A
33 (28, 5, 5, 0)
[ 0 17 0 0]
49 C
54 (49, 5, 5, 0)
[17 0 0 0]
CACTCGCAGGCGGTATATCGGGGTGTAAAATCACCAAATGGTGGATATTCTATAGCATTTGGTTAGTAGAATGGCGACGTAACGCA
idx 12 locidx 612
7 A
12 (7, 5, 5, 0)
[ 0 21 0 0]
25 T
30 (25, 5, 5, 0)
[ 0 0 21 0]
35 C
40 (35, 5, 5, 0)
[21 0 0 0]
41 T
46 (41, 5, 5, 0)
[ 0 0 21 0]
53 C
58 (53, 5, 5, 0)
[21 0 0 0]
ACCCGTTACACTACCGCATATTACTTGGCCAGGAACGTTGGTGGAAGGACGCACGCACGGTAGTTTCAAATACCTGAAGTGATCAC
idx 12 locidx 613
28 T
33 (28, 5, 5, 0)
[ 0 0 26 0]
44 C
49 (44, 5, 5, 0)
[26 0 0 0]
50 G
55 (50, 5, 5, 0)
[ 0 0 0 26]
61 C
66 (61, 5, 5, 0)
[26 0 0 0]
GGTAGTACGAGGCTTATGGGGACGTTGATACCCGAGCGGACGTCCCGTCTGGAGGTAGAGTCATGCCCCGGAGCGCATATTCAGGC
idx 12 locidx 614
25 C
30 (25, 5, 5, 0)
[20 0 0 0]
33 G
38 (33, 5, 5, 0)
[ 0 0 0 20]
43 C
48 (43, 5, 5, 0)
[20 0 0 0]
74 T
79 (74, 5, 5, 0)
[ 0 0 20 0]
GCGTCGGGCGTCATACTTATGCGTTCCATCTCTGAATTAGCACCATCGCTACCCCCTTTATTGATATTCTCGGTTCGTGCCGACCT
idx 12 locidx 615
30 T
35 (30, 5, 5, 0)
[ 0 0 21 0]
35 T
40 (35, 5, 5, 0)
[ 0 0 21 0]
57 C
62 (57, 5, 5, 0)
[21 0 0 0]
76 T
81 (76, 5, 5, 0)
[ 0 0 21 0]
CTAAGCGAGAAGGGGCAATGATAGTGCCACTTTAATCAAAGGGCTTCATTTAGGGTCCGACACAGCCCTGATTTACTGAGATTAGC
idx 12 locidx 616
24 C
29 (24, 5, 5, 0)
[20 0 0 0]
41 C
46 (41, 5, 5, 0)
[20 0 0 0]
60 T
65 (60, 5, 5, 0)
[ 0 0 20 0]
65 A
70 (65, 5, 5, 0)
[ 0 20 0 0]
70 G
75 (70, 5, 5, 0)
[ 0 0 0 20]
77 C
82 (77, 5, 5, 0)
[20 0 0 0]
CCCTCCCTGAGAGCGATGGCGCCTCTAACCTAGCTGAAGGCCGCTCAGCTCAAGGGGTGTTGTTAAAGCAGAGCTTGCATGGTTCT
idx 12 locidx 617
19 A
24 (19, 5, 5, 0)
[ 0 20 0 0]
53 T
58 (53, 5, 5, 0)
[ 0 0 20 0]
60 G
65 (60, 5, 5, 0)
[ 0 0 0 20]
61 G
66 (61, 5, 5, 0)
[ 0 0 0 20]
74 C
79 (74, 5, 5, 0)
[20 0 0 0]
81 C
86 (81, 5, 5, 0)
[20 0 0 0]
CTCCCAGGTCATTTTGAGGAGAGAGGTACCCAAACTGGCGTAGTTGTAATCTGTCACGCCGGCATTTACGGTGTCCCAGATCTGAC
idx 12 locidx 618
11 G
16 (11, 5, 5, 0)
[ 0 0 0 18]
33 C
38 (33, 5, 5, 0)
[18 0 0 0]
83 A
88 (83, 5, 5, 0)
[ 0 18 0 0]
TTGACGCAGATGCTCCTTCTCGATCTAAAACGGCCAAAATTTAACCCTCCTAATATTCAGCTCCCTATGCGCAAGATTAATTTAAC
idx 12 locidx 619
37 G
42 (37, 5, 5, 0)
[ 0 0 0 20]
61 C
66 (61, 5, 5, 0)
[20 0 0 0]
78 A
83 (78, 5, 5, 0)
[ 0 20 0 0]
TCACCCCGACAATGTCGGGCAGTTCCGATGGGCAAGAGCGCTGTGACCCGCGGCATGAGAGCCGTGTCGTGACTCAGTATGCTATG
idx 12 locidx 620
15 G
20 (15, 5, 5, 0)
[ 0 0 0 20]
27 A
32 (27, 5, 5, 0)
[ 0 20 0 0]
49 T
54 (49, 5, 5, 0)
[ 0 0 20 0]
CGTTAACCTCTGTCGGGACGCTGAAAGAGCGAGGCCGCGCTTTTAGTTATCTGGAAGTCCATAGCATCGGCAAGAAATATACTGTT
idx 12 locidx 621
29 C
34 (29, 5, 5, 0)
[19 0 0 0]
31 C
36 (31, 5, 5, 0)
[19 0 0 0]
63 A
68 (63, 5, 5, 0)
[ 0 19 0 0]
TAGATGGGGTAGCCCTCACTTTGACGTAGCCCGTTCACCCAGTTTTTCTGTATTCCCATTCGCAACCCTGCTCCGGCGGAGATACG
idx 12 locidx 622
4 T
9 (4, 5, 5, 0)
[ 0 0 18 0]
6 T
11 (6, 5, 5, 0)
[ 0 0 18 0]
11 A
16 (11, 5, 5, 0)
[ 0 18 0 0]
70 A
75 (70, 5, 5, 0)
[ 0 18 0 0]
GAGCTTTACGCATCAGGTCATGAACCATGGAGCTTATGGTTACTTGTGATACTTGCCTATGCTCTGCCCTATCTTATATAAACGAT
idx 12 locidx 623
56 C
61 (56, 5, 5, 0)
[23 0 0 0]
71 A
76 (71, 5, 5, 0)
[ 0 23 0 0]
78 C
83 (78, 5, 5, 0)
[22 1 0 0]
CTTAAAAATGGACGTATAACGGCCAGACAGCCGGCTAGGATCGCTGGACGACGCATCGCCATACCATGTGAAGTCGGGCGAATCTC-
idx 12 locidx 624
11 C
16 (11, 5, 5, 0)
[20 0 0 0]
13 C
18 (13, 5, 5, 0)
[20 0 0 0]
21 T
26 (21, 5, 5, 0)
[ 0 0 20 0]
40 A
45 (40, 5, 5, 0)
[ 0 20 0 0]
AAAGGTCGGAACACTTGCAGATACCCCGTTGAACACTAAGAGACGCGCGGGGCGGGCGTCTAACGGGGGGAGACGGCTTCTCAAAG
idx 12 locidx 625
23 A
28 (23, 5, 5, 0)
[ 0 20 0 0]
30 A
35 (30, 5, 5, 0)
[ 0 20 0 0]
33 C
38 (33, 5, 5, 0)
[20 0 0 0]
44 C
49 (44, 5, 5, 0)
[20 0 0 0]
83 T
88 (83, 5, 5, 0)
[ 0 0 20 0]
CACACATGACTCCTAGGCTATATACCCATAACCCTGGTGCGTGGCCGAACACCTGAGTATGACAAATTCTCGCCTTACTCGATTAG
idx 12 locidx 626
24 A
29 (24, 5, 5, 0)
[ 0 19 0 0]
28 G
33 (28, 5, 5, 0)
[ 0 0 0 19]
70 A
75 (70, 5, 5, 0)
[ 0 19 0 0]
79 T
84 (79, 5, 5, 0)
[ 0 0 19 0]
81 G
86 (81, 5, 5, 0)
[ 0 0 0 19]
82 A
87 (82, 5, 5, 0)
[ 0 19 0 0]
CGAACGCTGGGAACGCATCGCCGGAAGCGGAATACTGAGAGATTGCAACAATGCTCATGACGGTCTGACAATCCGATTATAGACAA
idx 12 locidx 627
12 A
17 (12, 5, 5, 0)
[ 0 23 0 0]
78 C
83 (78, 5, 5, 0)
[23 0 0 0]
80 A
85 (80, 5, 5, 0)
[ 0 23 0 0]
CCTCGAGTACCTACATCGAAGAAAAGATAATGCTAAAATTATGAGCCCTATACTGCTGAATGCCCGTTGGCTAGGGAACCACTTGT
idx 12 locidx 628
5 T
10 (5, 5, 5, 0)
[ 0 0 18 0]
10 T
15 (10, 5, 5, 0)
[ 0 0 18 0]
52 T
57 (52, 5, 5, 0)
[ 0 0 18 0]
59 C
64 (59, 5, 5, 0)
[18 0 0 0]
61 T
66 (61, 5, 5, 0)
[ 0 0 18 0]
TCCCGTTCGCTTGACAGAGCGGCGTGTTCGTTTGCCGCACAAAATCGTATGATCTTGAACGTGCAACATGTCCAATGTATGAACCT
idx 12 locidx 629
0 A
5 (0, 5, 5, 0)
[ 0 22 0 0]
3 C
8 (3, 5, 5, 0)
[22 0 0 0]
19 C
24 (19, 5, 5, 0)
[22 0 0 0]
32 C
37 (32, 5, 5, 0)
[22 0 0 0]
53 A
58 (53, 5, 5, 0)
[ 0 22 0 0]
68 C
73 (68, 5, 5, 0)
[22 0 0 0]
AGTCGCAGCTCCCTTATTCCGTGTACCGATCCCGGAGCCTGAAGCGGTAGGTAAATGATACCAGGCGTCGGATACTTTTTTCAAAC
idx 12 locidx 630
4 G
9 (4, 5, 5, 0)
[ 0 0 0 23]
27 G
32 (27, 5, 5, 0)
[ 0 0 0 23]
39 G
44 (39, 5, 5, 0)
[ 0 0 0 23]
67 A
72 (67, 5, 5, 0)
[ 0 23 0 0]
GACTGAAGCACCCCGGACTTATACATAGTGTCGACCATGGCAAGAAGTGTATGGCTTGAGCGGAGATACATTCAGGGACCCGTCGC
idx 12 locidx 631
48 T
53 (48, 5, 5, 0)
[ 0 0 20 0]
81 A
86 (81, 5, 5, 0)
[ 0 20 0 0]
TTAGTTCTTAGACTATTCGTTAACTCGAGGCGAGTGCCCTAAGCGCTATACGTGGCAGGACCTGTTGGAAAAACACGCAGAAAGGA
idx 12 locidx 632
11 A
16 (11, 5, 5, 0)
[ 0 21 0 0]
45 G
50 (45, 5, 5, 0)
[ 0 0 0 21]
58 A
63 (58, 5, 5, 0)
[ 0 21 0 0]
60 G
65 (60, 5, 5, 0)
[ 0 0 0 21]
TGGCGGACTAAAAGGAAGCGCAACACTCACATCGATTGATCGGATGCTGAACTACCCGAGGATTTACCAACATCTGTCATAGTTCC
idx 12 locidx 633
25 T
30 (25, 5, 5, 0)
[ 0 0 21 0]
30 C
35 (30, 5, 5, 0)
[21 0 0 0]
68 G
73 (68, 5, 5, 0)
[ 0 0 0 21]
AGTTTTTTCCAGACCCCGTTGGGTATCTGACGAAACTAACCCGTTAAACTACTTTATAGCAGCCTCTTGCTCCTGGAAGGGTCGTA
idx 12 locidx 634
2 T
7 (2, 5, 5, 0)
[ 0 0 21 0]
17 C
22 (17, 5, 5, 0)
[21 0 0 0]
25 C
30 (25, 5, 5, 0)
[21 0 0 0]
CGTGAAACCTTTTAGTTCTTTTCGCCTAGACACGACATTCTGGCTGCTCGTCGTGTTTTTACTGTATATACACGCCCTATGCGTCA
idx 12 locidx 635
14 A
19 (14, 5, 5, 0)
[ 0 15 0 0]
47 T
52 (47, 5, 5, 0)
[ 0 0 15 0]
55 G
60 (55, 5, 5, 0)
[ 0 0 0 15]
GGATACTTGTCTTGAAGTATTGAAATTTCCGGGATGCTTCGCGCTTGTATTCCCAGAGCTTACTAGGCTATGCTCCTAGAAAACGT
idx 12 locidx 636
0 T
5 (0, 5, 5, 0)
[ 0 0 22 0]
2 G
7 (2, 5, 5, 0)
[ 0 0 0 22]
33 T
38 (33, 5, 5, 0)
[ 0 0 22 0]
36 C
41 (36, 5, 5, 0)
[22 0 0 0]
41 G
46 (41, 5, 5, 0)
[ 0 0 0 22]
45 G
50 (45, 5, 5, 0)
[ 0 0 0 22]
66 G
71 (66, 5, 5, 0)
[ 0 0 0 22]
68 T
73 (68, 5, 5, 0)
[ 0 0 22 0]
70 C
75 (70, 5, 5, 0)
[22 0 0 0]
75 T
80 (75, 5, 5, 0)
[ 0 0 22 0]
76 G
81 (76, 5, 5, 0)
[ 0 0 0 22]
82 T
87 (82, 5, 5, 0)
[ 0 0 22 0]
TGGATACCCGGTTCTACCCATACCACTATCAAGTGGCCTTTGCTGGACAAAGATTCGAAGGTGGCGGGTCCGCTCTGGGTATTCTG
idx 12 locidx 637
11 C
16 (11, 5, 5, 0)
[19 0 0 0]
17 A
22 (17, 5, 5, 0)
[ 0 19 0 0]
21 G
26 (21, 5, 5, 0)
[ 0 0 0 19]
32 T
37 (32, 5, 5, 0)
[ 0 0 19 0]
61 T
66 (61, 5, 5, 0)
[ 0 0 19 0]
64 T
69 (64, 5, 5, 0)
[ 0 0 19 0]
81 G
86 (81, 5, 5, 0)
[ 0 0 0 19]
GGATCGAGCCTCAGGGCAGAGGTGCACCATTATAAACGCTCCTCCGTAAACGGCGATAGTGTGGTAGAGGGAAACCTATAGGGTAC
idx 12 locidx 638
0 G
5 (0, 5, 5, 0)
[ 0 0 0 20]
16 C
21 (16, 5, 5, 0)
[20 0 0 0]
28 A
33 (28, 5, 5, 0)
[ 0 20 0 0]
83 A
88 (83, 5, 5, 0)
[ 0 20 0 0]
GCGAGGCAAACGTTCACGTGAACACAAAATGAGGTGAACTTCACGGCTCCGGTGAGCGACATTGCTAACGACAGAAATACTCTACA
idx 12 locidx 639
2 R
7 (2, 5, 5, 0)
[ 0 11 0 10]
7 G
12 (7, 5, 5, 0)
[ 0 0 0 21]
10 T
15 (10, 5, 5, 0)
[ 0 0 21 0]
25 A
30 (25, 5, 5, 0)
[ 0 21 0 0]
GTRACGTGGCTGCTCGACACGCCAGACGGGCGCACTCAAAACAGGCTTAGGCTTTCGGCGGAAAACGAGCTTTGGAAACGTGCATT
idx 12 locidx 640
4 C
9 (4, 5, 5, 0)
[15 0 0 0]
17 A
22 (17, 5, 5, 0)
[ 0 15 0 0]
18 G
23 (18, 5, 5, 0)
[ 0 0 0 15]
27 G
32 (27, 5, 5, 0)
[ 0 0 0 15]
66 A
71 (66, 5, 5, 0)
[ 0 15 0 0]
77 C
82 (77, 5, 5, 0)
[15 0 0 0]
CTAACGTAGAAGCGGTAAGTATTACTGGAGAGGGATTAGACATCAAAAGAGCGTACTGTGAAAAGGATGCGTCACAGCCTGTTTAT
idx 12 locidx 641
54 T
59 (54, 5, 5, 0)
[ 0 0 15 0]
ACCAAAAATCACTCAGTACGAACCTCGACGATGGTCAGTGTTAAATGTTGCAACTACCCGTTCAGAATAGATTATCTGCTTAGCTT
idx 12 locidx 642
0 C
5 (0, 5, 5, 0)
[23 0 0 0]
10 A
15 (10, 5, 5, 0)
[ 0 23 0 0]
11 T
16 (11, 5, 5, 0)
[ 0 0 23 0]
16 C
21 (16, 5, 5, 0)
[23 0 0 0]
72 A
77 (72, 5, 5, 0)
[ 0 23 0 0]
73 C
78 (73, 5, 5, 0)
[23 0 0 0]
CGAAGGTTGTATGTGCCTATATCAAGCACGAAACATCCTACCAAGAGGTCTAGCTATAGCGCGGCAATAATAACACTCATGCTCTG
idx 12 locidx 643
6 A
11 (6, 5, 5, 0)
[ 0 20 0 0]
42 T
47 (42, 5, 5, 0)
[ 0 0 20 0]
44 T
49 (44, 5, 5, 0)
[ 0 0 20 0]
CTCAGTATCGCCATCGGGTCCTATCCTATTCATTAGAGGCACTGTTCCCCGCGTCGGTTTGATGCGCAATAAGTGACGAGTAGGAT
idx 12 locidx 644
6 C
11 (6, 5, 5, 0)
[18 0 0 0]
12 G
17 (12, 5, 5, 0)
[ 0 0 0 18]
45 T
50 (45, 5, 5, 0)
[ 0 0 18 0]
81 A
86 (81, 5, 5, 0)
[ 0 18 0 0]
GTTAAACTCGTGGTCCTATGGGGAGCCCATGTAGCATATGAATACTGCCCTCACTCGATTGCCTCATTTGCTGTAGGTATCACTGC
idx 12 locidx 645
21 T
26 (21, 5, 5, 0)
[ 0 0 19 0]
28 C
33 (28, 5, 5, 0)
[19 0 0 0]
42 T
47 (42, 5, 5, 0)
[ 0 0 19 0]
71 G
76 (71, 5, 5, 0)
[ 0 0 0 19]
CATAAGACGCTAGTGGCGACATAGTGCGCGATCCGGGCAAATTAAGAGAGGGGGTCAGAAAGTGAGTGTCAGCGGGTACGCCTCAG
idx 12 locidx 646
44 A
49 (44, 5, 5, 0)
[ 0 17 0 0]
45 G
50 (45, 5, 5, 0)
[ 0 0 0 17]
68 G
73 (68, 5, 5, 0)
[ 0 0 0 17]
74 A
79 (74, 5, 5, 0)
[ 0 17 0 0]
TGCTAGTATTGAAGATTTATACCAAGGGTTTTCGTGAGGCCCTAAGTCAGGTGTTGTTGTGGTCCAACGCTGGCAACGGAAGCAGT
idx 12 locidx 647
14 T
19 (14, 5, 5, 0)
[ 0 0 24 0]
40 S
45 (40, 5, 5, 0)
[12 0 0 12]
69 G
74 (69, 5, 5, 0)
[ 0 0 0 24]
77 C
82 (77, 5, 5, 0)
[24 0 0 0]
CCGCTGTTAATAAGTTTGTAGAGTTCAGTTAGCGTCGTTTSTCTGCCCGGCAGAGCGTTCGTCTCCTGGGGCACATACTGGGGGTA
idx 12 locidx 648
19 A
24 (19, 5, 5, 0)
[ 0 22 0 0]
22 T
27 (22, 5, 5, 0)
[ 0 0 22 0]
79 C
84 (79, 5, 5, 0)
[22 0 0 0]
ATCGCGGATCGTCTGACCGAGATTCCTCCAAGCAGAGAATATGGCGGCGTCTGTTCAAATCTAATGGAGTGGCGGGGGTCCTCCAT
idx 12 locidx 649
21 T
26 (21, 5, 5, 0)
[ 0 0 18 0]
31 G
36 (31, 5, 5, 0)
[ 0 0 0 18]
40 M
45 (40, 5, 5, 0)
[9 9 0 0]
46 Y
51 (46, 5, 5, 0)
[9 0 9 0]
81 C
86 (81, 5, 5, 0)
[18 0 0 0]
83 T
88 (83, 5, 5, 0)
[ 0 0 18 0]
CCCGTAGCCTACACAAGGAGCTTGAACTTTGGGAGTGCACMAGTGGYAAATAAACTATAGCCAACTAGGTTGTCGCGGCTGCGTGA
idx 13 locidx 650
1 A
6 (1, 5, 5, 0)
[ 0 22 0 0]
37 T
42 (37, 5, 5, 0)
[ 0 0 22 0]
47 C
52 (47, 5, 5, 0)
[22 0 0 0]
TATTAGGTTTCTCCGCGGTAATGAAGGTTGCGTCGGATACGCTATGGCCCTTCGTTGTGACTCTGCCTATCGGGAACGATCATGTC
idx 13 locidx 651
6 C
11 (6, 5, 5, 0)
[18 0 0 0]
46 -
51 (46, 5, 5, 0)
[18 0 0 0]
54 T
58 (54, 5, 5, 1)
[ 0 0 18 0]
71 A
75 (71, 5, 5, 1)
[ 0 18 0 0]
75 T
79 (75, 5, 5, 1)
[ 0 0 18 0]
GGTCCCCAGTGGTAAAGTCAGGTTGTTACATCGACCATGTAATCGC-CAGTGCCTCAGACATAAGTCCAACACTATCTTCGGGTTA
idx 13 locidx 652
23 T
28 (23, 5, 5, 0)
[ 0 0 22 0]
36 A
41 (36, 5, 5, 0)
[ 0 22 0 0]
47 C
52 (47, 5, 5, 0)
[22 0 0 0]
80 C
85 (80, 5, 5, 0)
[22 0 0 0]
TTAACGCAAGACCCATGTTACCCTGGCAAGTTTCGCAACGGATACCACACGTCCCTGGAACCGGCTGTTGGTGACCCCGACTGCAG
idx 13 locidx 653
9 W
14 (9, 5, 5, 0)
[0 7 7 0]
35 G
40 (35, 5, 5, 0)
[ 0 0 0 14]
43 A
48 (43, 5, 5, 0)
[ 0 14 0 0]
57 G
62 (57, 5, 5, 0)
[ 0 0 0 14]
67 G
72 (67, 5, 5, 0)
[ 0 0 0 14]
TTGACACCGWTCCGCGGAACCATCCGCACTCGCGGGACAGTTGAGGCAATGAAGGATGACCCGAGGCGTTCACTAGATGTTCCTCT
idx 13 locidx 654
20 C
25 (20, 5, 5, 0)
[18 0 0 0]
40 A
45 (40, 5, 5, 0)
[ 0 18 0 0]
52 A
57 (52, 5, 5, 0)
[ 0 18 0 0]
84 C
89 (84, 5, 5, 0)
[18 0 0 0]
AAAATGCGGAAATCGCCCTCCGGTTCCTCAAATAGAGATCATACCAATTAGTACAATGATATACATTGCCGGCGTCGTTAGGAGCC
idx 13 locidx 655
2 G
7 (2, 5, 5, 0)
[ 0 0 0 22]
20 G
25 (20, 5, 5, 0)
[ 0 0 0 22]
48 G
53 (48, 5, 5, 0)
[ 0 0 0 22]
85 A
90 (85, 5, 5, 0)
[ 0 22 0 0]
ATGTCTTAGTGTTTACGTTAGATTGACCCGGTTAGGCGTAGTTACTGAGGTTAAACCCACTCTAAGTCGATGTGATAAGCCCTCGA
idx 13 locidx 656
11 G
16 (11, 5, 5, 0)
[ 0 0 0 20]
30 G
35 (30, 5, 5, 0)
[ 0 0 0 20]
72 G
77 (72, 5, 5, 0)
[ 0 0 0 20]
77 T
82 (77, 5, 5, 0)
[ 0 0 20 0]
CCTCTTGTAACGTTTCGAGTGTTTTTGGGAGTAGATGCGTGATCAATCTGTTAGTTGACCCGTCCTGAGAGTGATAGTTCCGTTTA
idx 13 locidx 657
22 C
27 (22, 5, 5, 0)
[21 0 0 0]
44 G
49 (44, 5, 5, 0)
[ 0 0 0 21]
75 T
80 (75, 5, 5, 0)
[ 0 0 21 0]
83 C
88 (83, 5, 5, 0)
[21 0 0 0]
CCGGTCAGGTCGCGGATCCTAACGTCCATCACTAATGCCCATTTGTGCTCCCAGTACTAGCGCATCTTTTCTACTTAGCTATGCTG
NOT HERE
idx 13 locidx 659
2 C
7 (2, 5, 5, 0)
[26 0 0 0]
4 G
9 (4, 5, 5, 0)
[ 0 0 0 26]
25 C
30 (25, 5, 5, 0)
[26 0 0 0]
27 C
32 (27, 5, 5, 0)
[26 0 0 0]
40 G
45 (40, 5, 5, 0)
[ 0 0 0 26]
58 T
63 (58, 5, 5, 0)
[ 0 0 26 0]
84 G
89 (84, 5, 5, 0)
[ 0 0 0 26]
GGCCGGAGCGAAGTATGTACTTCACCACAGACTGTTAACTGACATATGGAGCGGCTATTCACATTATACATCCGCGGTCTTCAAGA
idx 13 locidx 660
6 A
11 (6, 5, 5, 0)
[ 0 16 0 0]
47 T
52 (47, 5, 5, 0)
[ 0 0 16 0]
58 T
63 (58, 5, 5, 0)
[ 0 0 16 0]
AGTATGATACCCCGGCACCTTAACAACGGTCAACGGTAAAAACGGTATCAGCGTCCAGTCCAGGTATTACCAAGGGGTCCGCTGTT
idx 13 locidx 661
58 S
63 (58, 5, 5, 0)
[12 0 0 13]
68 T
73 (68, 5, 5, 0)
[ 0 0 25 0]
75 T
80 (75, 5, 5, 0)
[ 0 0 25 0]
CGTTGGCCTGAGCTCAAACTCTCGCGGAAACTCGATCGACGCTCCGGATCGGATCAGASGGGTCGACATCGTAACTGTGTCAACTT
idx 13 locidx 662
8 A
13 (8, 5, 5, 0)
[ 0 23 0 0]
20 A
25 (20, 5, 5, 0)
[ 0 23 0 0]
36 G
41 (36, 5, 5, 0)
[ 0 0 0 23]
44 C
49 (44, 5, 5, 0)
[23 0 0 0]
49 C
54 (49, 5, 5, 0)
[23 0 0 0]
GCGACTCTATGGAGGAAGGCACACCCGCCATTGCAGGTCATCAACTATACTGAGTGCCGTGTTGGCACCATCCAGTGTGAATTACA
idx 13 locidx 663
1 A
6 (1, 5, 5, 0)
[ 0 18 0 0]
23 T
28 (23, 5, 5, 0)
[ 0 0 18 0]
27 T
32 (27, 5, 5, 0)
[ 0 0 18 0]
GACAAGATAGGAACCAGGATAGATCAGTCAGCTCCGATGTATGTAGACCGGGTACATTCCTATTAACGCAGCGCCCACTCCGTATC
idx 13 locidx 664
5 W
10 (5, 5, 5, 0)
[ 0 9 10 0]
24 T
29 (24, 5, 5, 0)
[ 0 0 19 0]
30 G
35 (30, 5, 5, 0)
[ 0 0 0 19]
33 A
38 (33, 5, 5, 0)
[ 0 19 0 0]
37 G
42 (37, 5, 5, 0)
[ 0 0 0 19]
77 C
82 (77, 5, 5, 0)
[19 0 0 0]
TCGGAWAGTAGTAACTCGAGACGCTGCCTGGGTACTAGAGAGCCTCGGCGAGTCTATGGTAGTAGGGGCCCACTTGGCTTCATGAC
idx 13 locidx 665
18 A
23 (18, 5, 5, 0)
[ 0 16 0 1]
44 T
49 (44, 5, 5, 0)
[ 0 0 17 0]
55 C
60 (55, 5, 5, 0)
[17 0 0 0]
70 C
75 (70, 5, 5, 0)
[17 0 0 0]
72 T
77 (72, 5, 5, 0)
[ 0 0 17 0]
82 C
87 (82, 5, 5, 0)
[17 0 0 0]
AAGCTTGCAGGCTTTCACATAAATCTGTACAAGATATTGCTTTCTGGTCAGTTAGCGAGAGACTCTTTTGCCTTTGCTCGCCCCTA
idx 13 locidx 666
17 G
22 (17, 5, 5, 0)
[ 0 0 0 18]
46 T
51 (46, 5, 5, 0)
[ 0 0 18 0]
49 A
54 (49, 5, 5, 0)
[ 0 18 0 0]
GAGCGAAACCGGCCGGCGCGCGTGGCTAACGTTCCTATCGCTTGCTTGTAGCGCAATCGGAATCTAAGTGGCGGCCTCCTCCAATC
idx 13 locidx 667
8 C
13 (8, 5, 5, 0)
[22 0 0 0]
11 A
16 (11, 5, 5, 0)
[ 0 22 0 0]
17 A
22 (17, 5, 5, 0)
[ 0 22 0 0]
30 C
35 (30, 5, 5, 0)
[22 0 0 0]
44 T
49 (44, 5, 5, 0)
[ 0 0 22 0]
55 T
60 (55, 5, 5, 0)
[ 0 0 22 0]
CTACATGACTTAACTGAATCCGGAGTTCCTCTTAGATGTGCGTTTTGTTAGGAGATAGGCACACTGCACCAGGCGGGTGGGTAAGC
idx 13 locidx 668
0 C
5 (0, 5, 5, 0)
[20 0 0 0]
7 G
12 (7, 5, 5, 0)
[ 0 0 0 20]
40 A
45 (40, 5, 5, 0)
[ 0 20 0 0]
49 G
54 (49, 5, 5, 0)
[ 0 0 0 20]
58 T
63 (58, 5, 5, 0)
[ 0 0 20 0]
64 T
69 (64, 5, 5, 0)
[ 0 0 20 0]
75 A
80 (75, 5, 5, 0)
[ 0 20 0 0]
CGTCGAGGCGATTCGTTGGAAACTTGCACGGCTTCTCCTGAGACCCGGCGTTGCCTATTGTGGATAGCTGTAGCAAGGCATGAGGG
idx 13 locidx 669
40 G
45 (40, 5, 5, 0)
[ 0 0 0 21]
66 G
71 (66, 5, 5, 0)
[ 0 0 0 21]
GAAGAGGTCCGGTATGCCATGAATCCGCTGCTAGATAACAGAGATGGGTTTATTGCGTGCTCTTCAGCAATAGAATTAGTAGGGGA
idx 13 locidx 670
0 A
5 (0, 5, 5, 0)
[ 0 24 0 0]
6 A
11 (6, 5, 5, 0)
[ 0 24 0 0]
19 G
24 (19, 5, 5, 0)
[ 0 0 0 24]
32 C
37 (32, 5, 5, 0)
[24 0 0 0]
34 A
39 (34, 5, 5, 0)
[ 0 24 0 0]
50 C
55 (50, 5, 5, 0)
[24 0 0 0]
59 T
64 (59, 5, 5, 0)
[ 0 0 24 0]
60 C
65 (60, 5, 5, 0)
[24 0 0 0]
84 C
89 (84, 5, 5, 0)
[24 0 0 0]
AAGTGAAAAACAACTCAGCGCTGGATTCCATCCCAGGCACTACCTCCTAGCTGGAAGGGTCCTCGAATGAGTAGTATTACTGACCC
idx 13 locidx 671
14 T
19 (14, 5, 5, 0)
[ 0 0 18 0]
43 A
48 (43, 5, 5, 0)
[ 0 18 0 0]
79 S
84 (79, 5, 5, 0)
[ 8 0 0 10]
CTCAAGACTTAGGATCTGTGCTCTACTTGTTCCACATTGTGACAAGCGCGGACTTACCACATCCAATCCTCCTCGGTACSAAATAT
idx 13 locidx 672
2 T
7 (2, 5, 5, 0)
[ 0 0 21 0]
15 C
20 (15, 5, 5, 0)
[21 0 0 0]
42 W
47 (42, 5, 5, 0)
[ 0 10 11 0]
CTTCCCTAACCTCCCCGAATTCTGCTCGCGTGCCAAGTTCGTWCTTGGCAAAGCCACGGCATGTCCTCGTAAAGCTGTAGATGGTT
idx 13 locidx 673
13 C
18 (13, 5, 5, 0)
[21 0 0 0]
15 A
20 (15, 5, 5, 0)
[ 0 21 0 0]
32 T
37 (32, 5, 5, 0)
[ 0 0 21 0]
38 T
43 (38, 5, 5, 0)
[ 0 0 21 0]
48 T
53 (48, 5, 5, 0)
[ 0 0 21 0]
52 A
57 (52, 5, 5, 0)
[ 0 21 0 0]
64 G
69 (64, 5, 5, 0)
[ 0 0 0 21]
73 T
78 (73, 5, 5, 0)
[ 0 0 21 0]
TCCCGGCGCTCTTCTACTCATACCTCCACTTCTACGTTTAGCGCATGTTGGGAGGTCCGATGAAGAGAGTGCGTCGTATCTCCAAT
idx 13 locidx 674
21 T
26 (21, 5, 5, 0)
[ 0 0 26 0]
75 A
80 (75, 5, 5, 0)
[ 0 26 0 0]
ATCCTCTGCTCCAGTCACTTGTACAGATCATGTCGTGGGCCGACATGTACAACAGTCATGGAGTTATAAAGGTAAAAACGGCCCAA
idx 13 locidx 675
2 T
7 (2, 5, 5, 0)
[ 0 0 12 0]
5 G
10 (5, 5, 5, 0)
[ 0 0 0 12]
12 T
17 (12, 5, 5, 0)
[ 0 0 12 0]
13 A
18 (13, 5, 5, 0)
[ 0 12 0 0]
28 C
33 (28, 5, 5, 0)
[12 0 0 0]
38 W
43 (38, 5, 5, 0)
[0 5 7 0]
84 T
89 (84, 5, 5, 0)
[ 0 0 12 0]
CTTCTGAAGCCTTAAATCCTCACGTCAACATGATGCCTWCATGAATCATATACTGTTTATATTATCCTTATACACAAAAGAGCCTA
idx 13 locidx 676
2 C
7 (2, 5, 5, 0)
[22 0 0 0]
19 C
24 (19, 5, 5, 0)
[22 0 0 0]
44 T
49 (44, 5, 5, 0)
[ 0 0 22 0]
54 A
59 (54, 5, 5, 0)
[ 0 22 0 0]
80 T
85 (80, 5, 5, 0)
[ 0 0 22 0]
AACGTCAAGGACCTAATTGCGGGCAATGGACCCGTGAACTCACGTTTCTGCTTGAGCAATAGCAGGTGTAATTTGTAGTCTAAATA
idx 13 locidx 677
72 C
77 (72, 5, 5, 0)
[20 0 0 0]
CACACCGCGCACACGCCGACGCTTCCACGATAAGCCCACTTACCTGTGCACGACCTGTGTATGGGCGCGGATCAAGCGCCGCACTT
idx 13 locidx 678
7 A
12 (7, 5, 5, 0)
[ 0 21 0 0]
84 A
89 (84, 5, 5, 0)
[ 0 21 0 0]
TACAAGAAAGCGAGATCTCGACTTTACGGATTGCGCCGTCTAGAGGATTGGTCATTGTTTGACAGATCTGTGAGACAGATACTGAC
idx 13 locidx 679
20 T
25 (20, 5, 5, 0)
[ 0 0 19 0]
39 T
44 (39, 5, 5, 0)
[ 0 0 19 0]
46 A
51 (46, 5, 5, 0)
[ 0 19 0 0]
GGGGTCGTCACTACAAAACGTAAACATGTAACATCGGGGTAGTGATATCTTAGCCCGCTCATAATTGTAACCGGTTCTATACTGGC
idx 13 locidx 680
28 C
33 (28, 5, 5, 0)
[24 0 0 0]
78 T
83 (78, 5, 5, 0)
[ 0 0 24 0]
81 C
86 (81, 5, 5, 0)
[24 0 0 0]
AAATGATATTCATGGCGAAGGTGTGTCTCTGCGACTTGCTTCAATCGAGAGGACTCTGGTTTATTTTGGGAAGCATACTGCCTAAG
idx 13 locidx 681
9 T
14 (9, 5, 5, 0)
[ 0 0 20 0]
31 G
36 (31, 5, 5, 0)
[ 0 0 0 20]
GACATTAGATATCCGACTAAAGGTATCTTAAGTTCTTAATAGATACCGCAAAACTCACGAGTGGTTTTCCTCATCGGATGCTTCCC
idx 13 locidx 682
11 A
16 (11, 5, 5, 0)
[ 0 19 0 0]
59 A
64 (59, 5, 5, 0)
[ 0 19 0 0]
73 G
78 (73, 5, 5, 0)
[ 0 0 0 19]
78 C
83 (78, 5, 5, 0)
[19 0 0 0]
83 C
88 (83, 5, 5, 0)
[19 0 0 0]
85 A
90 (85, 5, 5, 0)
[ 0 19 0 0]
87 -
91 (87, 5, 5, 1)
[0 0 0 0]
TTTTATGTACGACGCGTCGTGGACCACTGCATAAATCAAGCTTACCTTAATTAGGCGGAAGCCAGGCCCGTTTGCGTACAACACAA--
idx 13 locidx 683
26 C
31 (26, 5, 5, 0)
[20 0 0 0]
46 G
51 (46, 5, 5, 0)
[ 0 0 0 20]
68 A
73 (68, 5, 5, 0)
[ 0 20 0 0]
77 T
82 (77, 5, 5, 0)
[ 0 0 20 0]
78 T
83 (78, 5, 5, 0)
[ 0 0 20 0]
83 A
88 (83, 5, 5, 0)
[ 0 20 0 0]
AATTGCGACAAACGCTATCTAGCTTTCTGCAGGCGGAAATTTTTCGGCACTCATGTAAATCCAGCTCGAGGGTCGCTTTTCCCAAC
idx 13 locidx 684
17 C
22 (17, 5, 5, 0)
[14 0 0 0]
37 T
42 (37, 5, 5, 0)
[ 0 0 14 0]
44 A
49 (44, 5, 5, 0)
[ 0 14 0 0]
60 C
65 (60, 5, 5, 0)
[14 0 0 0]
61 G
66 (61, 5, 5, 0)
[ 0 0 0 14]
CTATGCTCAAAAGGCTCCCGAGATCGTTGTTGAGGCCTCGATCAAACTATAGCGTTTCAACGGAGCCTTCTCATACACAAGTAGAC
idx 13 locidx 685
51 A
56 (51, 5, 5, 0)
[ 0 25 0 0]
TATAGTTTCATTTTACCGGAGATACAGGGCCGAATTCATTGGCGCCGCTGTAGACGGCCTTTAACTCTCGTAACCGGTAGCAAGTT
idx 13 locidx 686
13 G
18 (13, 5, 5, 0)
[ 0 0 0 19]
18 A
23 (18, 5, 5, 0)
[ 0 19 0 0]
19 T
24 (19, 5, 5, 0)
[ 0 0 19 0]
56 T
61 (56, 5, 5, 0)
[ 0 0 19 0]
80 A
85 (80, 5, 5, 0)
[ 0 19 0 0]
GATACAAGTAGAGGACTTATGTCCCGCTATCGAGCCGAAAACGGACCTTGCGAAAGTACCGGTCTTTTATGGCGGAAAAAAGGGTC
idx 13 locidx 687
0 G
5 (0, 5, 5, 0)
[ 0 0 0 20]
22 A
27 (22, 5, 5, 0)
[ 0 20 0 0]
49 G
54 (49, 5, 5, 0)
[ 0 0 0 20]
GTCTCACGGCGATGATCAGCCCAGTAGCTACAAACCAATTCTAAGATCAGGTGTAGCCAGCGATTCTAGAGGCGCGAGTTCTGGCG
idx 13 locidx 688
4 C
9 (4, 5, 5, 0)
[22 0 0 0]
13 C
18 (13, 5, 5, 0)
[22 0 0 0]
23 G
28 (23, 5, 5, 0)
[ 0 0 0 22]
28 G
33 (28, 5, 5, 0)
[ 0 0 0 22]
29 A
34 (29, 5, 5, 0)
[ 0 22 0 0]
41 A
46 (41, 5, 5, 0)
[ 0 22 0 0]
50 G
55 (50, 5, 5, 0)
[ 0 0 0 22]
56 T
61 (56, 5, 5, 0)
[ 0 0 22 0]
74 G
79 (74, 5, 5, 0)
[ 0 0 0 22]
78 G
83 (78, 5, 5, 0)
[ 0 0 0 22]
81 C
86 (81, 5, 5, 0)
[22 0 0 0]
GAGGCGTATAAGCCGCGTATGTAGGCTTGATGGGCGGCTAAACAACTTTTGGAGTCTCCAGTATACCTTCGAACGATTGGCCTATC
idx 13 locidx 689
0 T
5 (0, 5, 5, 0)
[ 0 0 18 0]
35 A
40 (35, 5, 5, 0)
[ 0 18 0 0]
51 G
56 (51, 5, 5, 0)
[ 0 0 0 18]
73 C
78 (73, 5, 5, 0)
[18 0 0 0]
TCAAGTGCGCGTGAGTCTTCACCTATAGGCGGACCAGGCAAAAGGGTGGTAGCAAAAGACTTTTGTGATTGCACAGTTATTCACAC
idx 13 locidx 690
6 G
11 (6, 5, 5, 0)
[ 0 0 0 20]
36 M
41 (36, 5, 5, 0)
[10 10 0 0]
46 C
51 (46, 5, 5, 0)
[20 0 0 0]
57 G
62 (57, 5, 5, 0)
[ 0 0 0 20]
85 A
90 (85, 5, 5, 0)
[ 0 20 0 0]
GTCCATGACACGGACCCAAATTCAAGTTTTACCTGAMTTTGGTAATCGAGTAACCGCGCTCCGACTTAATCACTCCAATCTACGCA
idx 13 locidx 691
57 A
62 (57, 5, 5, 0)
[ 0 16 0 0]
59 C
64 (59, 5, 5, 0)
[16 0 0 0]
61 A
66 (61, 5, 5, 0)
[ 0 16 0 0]
CAGGTCACGAAACACGCATTATTGCATGTCGTATGATTACTAGCAGGGCTATTATGTAACCATATATCGCCCCCCCCCGAACCTCA
idx 13 locidx 692
45 G
50 (45, 5, 5, 0)
[ 0 0 0 23]
68 T
73 (68, 5, 5, 0)
[ 0 1 22 0]
79 A
84 (79, 5, 5, 0)
[ 0 23 0 0]
CTCCGTAACCAAGTGGGAACTCTATACGTACAACTATGTGACCCAGGCGTAAGCATTCAGCACCACCGTTGGTGTAGGCAGACATT
idx 13 locidx 693
0 A
5 (0, 5, 5, 0)
[ 0 22 0 0]
26 C
31 (26, 5, 5, 0)
[22 0 0 0]
31 C
36 (31, 5, 5, 0)
[22 0 0 0]
35 A
40 (35, 5, 5, 0)
[ 0 22 0 0]
63 T
68 (63, 5, 5, 0)
[ 0 0 22 0]
85 C
90 (85, 5, 5, 0)
[22 0 0 0]
AGGCCGACTAGCGTTGCAAAATGTGACTACTCTAAAGATTCTGGCAATTGTATTGAGCACTGGTTGGGACCCACCACCCCAACTTC
idx 13 locidx 694
8 A
13 (8, 5, 5, 0)
[ 0 18 0 0]
25 C
30 (25, 5, 5, 0)
[18 0 0 0]
48 C
53 (48, 5, 5, 0)
[18 0 0 0]
71 G
76 (71, 5, 5, 0)
[ 0 0 0 18]
84 C
89 (84, 5, 5, 0)
[18 0 0 0]
85 A
90 (85, 5, 5, 0)
[ 0 18 0 0]
GCCGGGAAATGGTCCGCAGGCGCGTCTTTTGCGCTTCGCGGGGTGCATCAGTATTCGCCGCGTATGAAGATGAATCATAAGCCCCA
idx 13 locidx 695
4 A
9 (4, 5, 5, 0)
[ 0 22 0 0]
9 C
14 (9, 5, 5, 0)
[22 0 0 0]
24 T
29 (24, 5, 5, 0)
[ 0 0 22 0]
29 A
34 (29, 5, 5, 0)
[ 0 22 0 0]
TTTAAGGAGCGCATACTTTGGATATGTCGAAGGGCAACTCTGCATTCTACCTAGAGCGCTACCGCAGGCATACGCATTGCTGGGTG
idx 13 locidx 696
24 C
29 (24, 5, 5, 0)
[21 0 0 0]
25 G
30 (25, 5, 5, 0)
[ 0 0 0 21]
68 G
73 (68, 5, 5, 0)
[ 0 0 0 21]
AATAAAGAATCGTACCTCCCAAATCGCTATCACAAGTCGTCGCGATATAGATCCCGGAAGTGCGTGTTGAACGCGATCGCGTAGAC
idx 13 locidx 697
28 G
33 (28, 5, 5, 0)
[ 0 0 0 19]
31 G
36 (31, 5, 5, 0)
[ 0 0 0 19]
40 A
45 (40, 5, 5, 0)
[ 0 19 0 0]
69 G
74 (69, 5, 5, 0)
[ 0 0 0 19]
76 A
81 (76, 5, 5, 0)
[ 0 19 0 0]
TCTATGGGAGAATCTAGAGCATTAGCAGGCGGTTGCCGTCAGGCTAGTTGTGTACGTAACACTTCCCGTGCGAGTAATCAAAACTC
idx 13 locidx 698
36 T
41 (36, 5, 5, 0)
[ 0 0 24 0]
41 G
46 (41, 5, 5, 0)
[ 0 0 0 24]
43 T
48 (43, 5, 5, 0)
[ 0 0 24 0]
62 S
67 (62, 5, 5, 0)
[12 0 0 12]
GTTTCGATCTTTTATGCCTTTTTTTAGTACCGACAATAGTTGCTAAGTCAGAGGGGAAGGTGSGAGCTCGACCGTTAACCCTTCGC
idx 13 locidx 699
25 C
30 (25, 5, 5, 0)
[19 0 0 0]
56 Y
61 (56, 5, 5, 0)
[ 8 0 11 0]
77 T
82 (77, 5, 5, 0)
[ 0 0 19 0]
78 C
83 (78, 5, 5, 0)
[19 0 0 0]
84 G
89 (84, 5, 5, 0)
[ 0 0 0 19]
CGGCTTTTGATTCCAGCTATGGGCTCCATTTTTGTAATATCAGGGTCCTCGAGGCAYAGGTATCATAACATACTGGTTCCTCCAGC
idx 14 locidx 700
30 A
35 (30, 5, 5, 0)
[ 0 21 0 0]
42 A
47 (42, 5, 5, 0)
[ 0 21 0 0]
48 A
53 (48, 5, 5, 0)
[ 0 21 0 0]
67 W
72 (67, 5, 5, 0)
[ 0 8 13 0]
77 G
82 (77, 5, 5, 0)
[ 0 0 0 21]
AGGTCGAAGGGGGGTATTGTACTTAGTTCAATTACGCAATGAAATGCCAGAGGTCAATGCAAGGTAAWTTTGAGGAGGCGTATTTG
idx 14 locidx 701
2 G
7 (2, 5, 5, 0)
[ 0 0 0 18]
10 T
15 (10, 5, 5, 0)
[ 0 0 18 0]
41 A
46 (41, 5, 5, 0)
[ 0 18 0 0]
61 G
66 (61, 5, 5, 0)
[ 0 0 0 18]
85 A
90 (85, 5, 5, 0)
[ 0 18 0 0]
CAGTAATCTCTGCCCAGATTTAGAAACGTGCCAGCAAAGCCAACACATAACGCGGTGATCCGGCTGTTTACGGACCGTCAGGATCA
idx 14 locidx 702
6 C
11 (6, 5, 5, 0)
[20 0 0 0]
53 A
58 (53, 5, 5, 0)
[ 0 20 0 0]
82 A
87 (82, 5, 5, 0)
[ 0 20 0 0]
GGGCCCCTGTGACAAAGCCTGTATAGCAGTTAAAATACGCGATTACACTACATATCTGAAGACTTCACTCCTCGGGGACAAAAT-TC
idx 14 locidx 703
9 A
14 (9, 5, 5, 0)
[ 0 21 0 0]
16 C
21 (16, 5, 5, 0)
[21 0 0 0]
27 C
32 (27, 5, 5, 0)
[21 0 0 0]
82 T
87 (82, 5, 5, 0)
[ 0 0 21 0]
ACGCATTAGATGTACCCATTGGAACCGCGACGTATATGGCCTGTACGAACGGCTTCACGGTAGTTGGCAATTACTGCATAATTCTC
idx 14 locidx 704
22 G
27 (22, 5, 5, 0)
[ 0 0 0 17]
46 T
51 (46, 5, 5, 0)
[ 0 0 17 0]
59 G
64 (59, 5, 5, 0)
[ 0 0 0 17]
72 T
77 (72, 5, 5, 0)
[ 0 0 17 0]
CCCAGTAACCAATGAGGTCTCCGGCAGTCTGACCCGCTGCTGGGAGTTGGTACCTAGTCGGCTCCGGTAAGATCGTAATTAGTATC
idx 14 locidx 705
2 A
7 (2, 5, 5, 0)
[ 0 21 0 0]
4 A
9 (4, 5, 5, 0)
[ 0 21 0 0]
7 G
12 (7, 5, 5, 0)
[ 0 0 0 21]
37 G
42 (37, 5, 5, 0)
[ 0 0 0 21]
50 A
55 (50, 5, 5, 0)
[ 0 21 0 0]
56 C
61 (56, 5, 5, 0)
[21 0 0 0]
57 C
62 (57, 5, 5, 0)
[21 0 0 0]
66 A
71 (66, 5, 5, 0)
[ 0 21 0 0]
CAAAACCGACTCAATCTAGTACCTGATTCTGTACATGGTCAGTTACAATTAGTATACCCACCGATTAATAAGATCGAGTAAGCAAG
idx 14 locidx 706
11 C
16 (11, 5, 5, 0)
[22 0 0 0]
33 G
38 (33, 5, 5, 0)
[ 0 0 0 22]
42 A
47 (42, 5, 5, 0)
[ 0 22 0 0]
56 G
61 (56, 5, 5, 0)
[ 0 0 0 22]
68 C
73 (68, 5, 5, 0)
[22 0 0 0]
GTTACTGACGGCGGTAAGGAATCGACCGCACGTGCAAACTGGAAATGGAAAACAAGGATTGGAAATGTCGAAGCCCACCGTCGCAT
idx 14 locidx 707
60 A
65 (60, 5, 5, 0)
[ 0 22 0 0]
73 C
78 (73, 5, 5, 0)
[21 1 0 0]
85 A
90 (85, 5, 5, 0)
[ 0 22 0 0]
ATTGCAGATCATATGGGCAGTAACCCGACCCGAGAGTGTGCCCGCACTAAGGTGGTATGGAAAACCCCGCTCCCTAAGGGCCATGA
idx 14 locidx 708
29 C
34 (29, 5, 5, 0)
[22 0 0 0]
GGCATCTTGTGAGGAGGGCGTCAGTGGTCCGAATTTACCTCTAAAGATATCACCTACGGCCCGCTCCGCTTAGGCTGGTTTTAATC
idx 14 locidx 709
9 T
14 (9, 5, 5, 0)
[ 0 0 22 0]
15 T
20 (15, 5, 5, 0)
[ 0 0 22 0]
24 T
29 (24, 5, 5, 0)
[ 0 0 22 0]
55 G
60 (55, 5, 5, 0)
[ 0 0 0 22]
60 C
65 (60, 5, 5, 0)
[22 0 0 0]
77 A
82 (77, 5, 5, 0)
[ 0 21 0 1]
TTCCGAGTCTTACTGTCCCAACGCTAGAAACAGGAGCCAACGCCATACACTAATAGCCGGCCGGAGCACCGCCCGTTACCGACGAT
idx 14 locidx 710
22 A
27 (22, 5, 5, 0)
[ 0 21 0 0]
34 T
39 (34, 5, 5, 0)
[ 0 0 21 0]
45 A
50 (45, 5, 5, 0)
[ 0 21 0 0]
50 A
55 (50, 5, 5, 0)
[ 0 21 0 0]
GGTACGACCAATCTAGCAAGCGAGGGTAGTTACGTCTACCCTCCCAAGCAAGACTCAAACAGACAAGACTTTCGACTGCATGTCCC
idx 14 locidx 711
4 T
9 (4, 5, 5, 0)
[ 0 0 23 0]
17 C
22 (17, 5, 5, 0)
[23 0 0 0]
50 A
55 (50, 5, 5, 0)
[ 0 23 0 0]
GCGTTCAAGAAGATTAACCTTAAGCATGCAACACGCACGCACGAAACCGAATGGTCAGTTGGCCCTAAATGCGCTTAGTTACGACC
idx 14 locidx 712
0 C
5 (0, 5, 5, 0)
[21 0 0 0]
2 A
7 (2, 5, 5, 0)
[ 0 21 0 0]
8 C
13 (8, 5, 5, 0)
[21 0 0 0]
26 C
31 (26, 5, 5, 0)
[21 0 0 0]
34 G
39 (34, 5, 5, 0)
[ 0 0 0 21]
38 C
43 (38, 5, 5, 0)
[21 0 0 0]
53 C
58 (53, 5, 5, 0)
[21 0 0 0]
CAAGATCACGGCGGACAGAACCGCCCCTTTTCTTGTTGCTGGTTAACTTCACGCCGTCATGGTTAGTGGTCAGGCTTTACAGGTCC
idx 14 locidx 713
2 G
7 (2, 5, 5, 0)
[ 0 0 0 19]
10 T
15 (10, 5, 5, 0)
[ 0 0 19 0]
22 S
27 (22, 5, 5, 0)
[10 0 0 9]
24 G
29 (24, 5, 5, 0)
[ 0 0 0 19]
44 A
49 (44, 5, 5, 0)
[ 0 19 0 0]
48 w
53 (48, 5, 5, 0)
[ 0 9 10 0]
TAGATCGTGGTTGGCGCGGCAASTGGTACGACGGATACCCAGGCAGGGwTTTACAGCGTGCTGTCATCGCCAGAGGTTGGGAGCAT
idx 14 locidx 714
33 C
38 (33, 5, 5, 0)
[23 0 0 0]
55 C
60 (55, 5, 5, 0)
[23 0 0 0]
GAGCCACCGGATAAAGGCTGTATACTACCGGAACCTATGTTCGCACCTGGGGCAGCAGGGATTTGTTTTCGAATAATAGAAAGTTT
idx 14 locidx 715
38 T
43 (38, 5, 5, 0)
[ 0 0 21 0]
40 G
45 (40, 5, 5, 0)
[ 0 0 0 21]
41 C
46 (41, 5, 5, 0)
[21 0 0 0]
52 C
57 (52, 5, 5, 0)
[21 0 0 0]
56 A
61 (56, 5, 5, 0)
[ 0 21 0 0]
71 T
76 (71, 5, 5, 0)
[ 0 0 21 0]
GCCGTGCCAGGACACACTCAAGGGTCATCTGTTGCGAATTGCCAATGTGCTGCGGCATGAAACGTACTCACTTGGTCAAGCCGCTT
idx 14 locidx 716
28 C
33 (28, 5, 5, 0)
[17 0 0 0]
29 C
34 (29, 5, 5, 0)
[17 0 0 0]
45 T
50 (45, 5, 5, 0)
[ 0 0 17 0]
59 G
64 (59, 5, 5, 0)
[ 0 0 0 17]
80 A
85 (80, 5, 5, 0)
[ 0 17 0 0]
GTTCTACCGATAGTCGGTAATTCTATGGCCGAGTTGTTTTAACGTTCGTTTAATTGTCTGGCCGGAGCTGCCGATTCTCCACCAAG
idx 14 locidx 717
2 T
7 (2, 5, 5, 0)
[ 0 0 16 0]
8 T
13 (8, 5, 5, 0)
[ 0 0 16 0]
15 G
20 (15, 5, 5, 0)
[ 0 0 0 16]
24 G
29 (24, 5, 5, 0)
[ 0 0 0 16]
32 A
37 (32, 5, 5, 0)
[ 0 16 0 0]
39 C
44 (39, 5, 5, 0)
[16 0 0 0]
62 A
67 (62, 5, 5, 0)
[ 0 16 0 0]
69 T
74 (69, 5, 5, 0)
[ 0 0 16 0]
CCTTGGGGTAAAGAAGGTCTAAAGGAATCACCACCCTCACTCCCTGAGAGTACGAAATGGAGACGAGCCTTTAATCTTCGTAGAGA
idx 14 locidx 718
27 T
32 (27, 5, 5, 0)
[ 0 0 23 0]
63 A
68 (63, 5, 5, 0)
[ 0 23 0 0]
66 G
71 (66, 5, 5, 0)
[ 0 0 0 23]
74 G
79 (74, 5, 5, 0)
[ 0 0 0 23]
AGACGCTCAGGTTGGAATCGACGGGTGTCGAGTCCTCGTCTCCTGAACTAAGTATCTAGTACTAACGATACGAAGGCAAGAGAGTG
idx 14 locidx 719
11 G
16 (11, 5, 5, 0)
[ 0 0 0 18]
21 T
26 (21, 5, 5, 0)
[ 0 0 18 0]
30 C
35 (30, 5, 5, 0)
[18 0 0 0]
51 T
56 (51, 5, 5, 0)
[ 0 0 18 0]
61 G
66 (61, 5, 5, 0)
[ 0 0 0 18]
67 A
72 (67, 5, 5, 0)
[ 0 18 0 0]
GCACGAAGCTCGAACACGCGCTCCCTCGACCCGGATTCACGCTGGCCACAGTTGGCTTCTCGTTACGAGCATGTATTACGTAACTG
idx 14 locidx 720
49 G
54 (49, 5, 5, 0)
[ 0 0 0 20]
57 A
62 (57, 5, 5, 0)
[ 0 20 0 0]
77 S
82 (77, 5, 5, 0)
[11 0 0 9]
CAACCATGATTCCGAGATACAGTGCTTGAGTTCTTTCTCATGTCTGGGTGCGATAGGAATGAAGTTTTGGCCCTGGTSTGGCCTTC
idx 14 locidx 721
19 C
24 (19, 5, 5, 0)
[16 0 0 0]
30 G
35 (30, 5, 5, 0)
[ 0 0 0 16]
ACAACCACGAAGGTTAGGACCAGTTAGCATGAATCTACATTTTCTTTCGTCCTACGTCATAATATACAACCCCGGGAATCTGCCGT
idx 14 locidx 722
78 T
83 (78, 5, 5, 0)
[ 0 0 20 0]
TAGGGTTCGAGCGTTTGTATCCGGCGTTTGCGCCTCTAAGACCTATTGTCCAGGATTTGCTACTCCGTTAAAACCGGGTGGTTTGT
idx 14 locidx 723
7 G
12 (7, 5, 5, 0)
[ 0 0 0 20]
28 A
33 (28, 5, 5, 0)
[ 0 20 0 0]
31 T
36 (31, 5, 5, 0)
[ 0 0 20 0]
78 T
83 (78, 5, 5, 0)
[ 0 0 20 0]
GTGTAAGGACTGATGCATCTACCGTTTAACCTCGATTTGGTTGGGGTAAAACCAACCATGCACTCTCGTTGCTGAGCGTTCGGTAC
idx 14 locidx 724
7 G
12 (7, 5, 5, 0)
[ 0 0 0 17]
37 T
42 (37, 5, 5, 0)
[ 0 0 17 0]
52 G
57 (52, 5, 5, 0)
[ 0 0 0 17]
64 C
69 (64, 5, 5, 0)
[17 0 0 0]
74 G
79 (74, 5, 5, 0)
[ 0 0 0 17]
TCGAGTAGGGCAGGGACGCTCTAAAACCCTGATCAACTGCAGAGATCGGCAAGCCAACGCCGTGCAATTTGTGTGCATCATTTCAA
idx 14 locidx 725
9 A
14 (9, 5, 5, 0)
[ 0 17 0 0]
15 C
20 (15, 5, 5, 0)
[17 0 0 0]
25 K
30 (25, 5, 5, 0)
[ 0 0 10 7]
29 C
34 (29, 5, 5, 0)
[17 0 0 0]
78 C
83 (78, 5, 5, 0)
[17 0 0 0]
84 A
89 (84, 5, 5, 0)
[ 0 17 0 0]
CCGCCCTGCACAGATCCTGAGTCGGKCATCCAGCAAGTATGATGAAGGATACAGCTGCATTGAAAACGGCGATAATGACTTTTAAG
idx 14 locidx 726
22 G
27 (22, 5, 5, 0)
[ 0 0 0 16]
24 T
29 (24, 5, 5, 0)
[ 0 0 16 0]
50 G
55 (50, 5, 5, 0)
[ 0 0 0 16]
AGCTGACCAAGATTCATACTAGGATGTGGAGAACCGTATTTTTGGTGAAAGACAAAAGACGTGCTGTACACATACCCGTTGCATGC
idx 14 locidx 727
4 A
9 (4, 5, 5, 0)
[ 0 19 0 0]
18 C
23 (18, 5, 5, 0)
[19 0 0 0]
25 C
30 (25, 5, 5, 0)
[19 0 0 0]
46 G
51 (46, 5, 5, 0)
[ 0 0 0 19]
75 C
80 (75, 5, 5, 0)
[19 0 0 0]
TATGACAGCTTCGCCAGGCTTCGATCTGCTCCTCGACACGACCCTAGCGAATACACACCTCTTGCAACCTAGTTGCTATGTTTGCT
idx 14 locidx 728
4 G
9 (4, 5, 5, 0)
[ 0 0 0 21]
5 A
10 (5, 5, 5, 0)
[ 0 21 0 0]
16 C
21 (16, 5, 5, 0)
[21 0 0 0]
18 A
23 (18, 5, 5, 0)
[ 0 21 0 0]
22 T
27 (22, 5, 5, 0)
[ 0 0 21 0]
35 T
40 (35, 5, 5, 0)
[ 0 0 21 0]
ATCAGAATATGGTATGCGACGATCACCACGGAAGATCTCGGTGACGTGAACTGACGGAGACGCGTGAGGTAATCTATTCGAGACTA
idx 14 locidx 729
1 T
6 (1, 5, 5, 0)
[ 0 0 19 0]
32 A
37 (32, 5, 5, 0)
[ 0 19 0 0]
53 G
58 (53, 5, 5, 0)
[ 0 0 0 19]
63 R
68 (63, 5, 5, 0)
[ 0 14 0 5]
66 A
71 (66, 5, 5, 0)
[ 0 19 0 0]
75 T
80 (75, 5, 5, 0)
[ 0 0 19 0]
80 G
85 (80, 5, 5, 0)
[ 0 0 0 19]
ATTTTTCACCAGTCCGCCATCGATTACGTCTGAGGTGAGTATTACAGTTCACCGGGAGCCCGTRAGAGCGGGGCATTAAGGTAGCT
idx 14 locidx 730
5 T
10 (5, 5, 5, 0)
[ 0 0 20 0]
31 G
36 (31, 5, 5, 0)
[ 0 0 0 20]
40 A
45 (40, 5, 5, 0)
[ 0 20 0 0]
43 T
48 (43, 5, 5, 0)
[ 0 0 20 0]
61 C
66 (61, 5, 5, 0)
[20 0 0 0]
TGCACTGTTTCGTTTTTCGAGTATTCATGATGAAGGCACAACCTGGTATGATCACATTGGGCGCTTAATCGGGCCACTCACCGAGA
idx 14 locidx 731
9 A
14 (9, 5, 5, 0)
[ 0 22 0 0]
12 C
17 (12, 5, 5, 0)
[22 0 0 0]
71 C
76 (71, 5, 5, 0)
[22 0 0 0]
75 C
80 (75, 5, 5, 0)
[22 0 0 0]
82 C
87 (82, 5, 5, 0)
[22 0 0 0]
84 C
89 (84, 5, 5, 0)
[22 0 0 0]
GCAGAGGTCAAACAAGAGGTAATTGATGTCAAATTCAAACGCAATGTCATTGGTTCTGCTTGTGCGTCTTTCCCCCCTTAAGCGCA
idx 14 locidx 732
19 C
24 (19, 5, 5, 0)
[20 0 0 0]
43 A
48 (43, 5, 5, 0)
[ 0 20 0 0]
49 T
54 (49, 5, 5, 0)
[ 0 0 20 0]
68 G
73 (68, 5, 5, 0)
[ 0 0 0 20]
85 T
90 (85, 5, 5, 0)
[ 0 0 20 0]
AGATGGGCCCATATGGCCTCTCCAAGATCAGCAATTTGAAGGCATGGGCTATGATACTGCTCCTGGGCGCGGGATTAACAAAGCGT
idx 14 locidx 733
6 A
11 (6, 5, 5, 0)
[ 0 20 0 0]
63 A
68 (63, 5, 5, 0)
[ 1 19 0 0]
69 T
74 (69, 5, 5, 0)
[ 0 0 20 0]
AAACTTAGCCGGAACGCTATCGCCCGAATGACTCTCGGTGGGATGTGGTGCGCGTGAGTACAAACTAGCTCGAAAGAGAGTGCCGT
idx 14 locidx 734
3 C
8 (3, 5, 5, 0)
[19 0 0 0]
21 T
26 (21, 5, 5, 0)
[ 0 0 19 0]
44 T
49 (44, 5, 5, 0)
[ 0 0 19 0]
AACCGTTTAGGAGGAGACTATTCGAGTAAGGACTCGTCCCCTTCTATCAGTACGTCTACGAGTCCAACACCTGGAGCAATATCCAC
idx 14 locidx 735
0 G
5 (0, 5, 5, 0)
[ 0 0 0 22]
4 A
9 (4, 5, 5, 0)
[ 0 22 0 0]
31 G
36 (31, 5, 5, 0)
[ 0 0 0 22]
77 C
82 (77, 5, 5, 0)
[22 0 0 0]
GTCCAACGAACTTAAAGGACCCTAGAAAGTCGTTAGTGTACAACCCCCTTACTTTATGGGGGAAGCAATCTTATATGCATTAAACC
idx 14 locidx 736
13 T
18 (13, 5, 5, 0)
[ 0 0 26 0]
34 G
39 (34, 5, 5, 0)
[ 0 0 0 26]
48 T
53 (48, 5, 5, 0)
[ 0 0 26 0]
83 G
88 (83, 5, 5, 0)
[ 0 0 0 26]
GTGTCCTGCCCTGTTTGCAGTTAATATAACGTGGGTACCAGATGTACATGTAATCCTACACGCGAGGAGTACAACGTTGGCAGGGC
idx 14 locidx 737
38 C
43 (38, 5, 5, 0)
[16 0 0 0]
51 G
56 (51, 5, 5, 0)
[ 0 0 0 16]
60 C
65 (60, 5, 5, 0)
[16 0 0 0]
ACCGGATTCAAGAGATACAGACAATAGAAAGTCTGAGCCCGCGGTCGTTGAGAGTCTGGTCCTTGAGTTTCACTTCGGGCTAAACC
idx 14 locidx 738
29 C
34 (29, 5, 5, 0)
[24 0 0 0]
32 C
37 (32, 5, 5, 0)
[24 0 0 0]
49 G
54 (49, 5, 5, 0)
[ 0 0 0 24]
57 A
62 (57, 5, 5, 0)
[ 0 24 0 0]
TCAGGTGATATTTGTTGTACCACGTGACGCCGCTCCATCTCAAGAACTTGTATTTCTATACTCTTAAGAAGTGGGTAAAACCCTCG
idx 14 locidx 739
26 G
31 (26, 5, 5, 0)
[ 0 0 0 20]
61 G
66 (61, 5, 5, 0)
[ 0 0 0 20]
63 G
68 (63, 5, 5, 0)
[ 0 0 0 20]
65 A
70 (65, 5, 5, 0)
[ 0 20 0 0]
GATGGAGACCCCGGGGTTTCTCAGCGGCATAGGTCCATTTGTCAATGAGGTTAAATGCTTCGAGCAGATACGTGCACGCTTCCCAA
idx 14 locidx 740
58 A
63 (58, 5, 5, 0)
[ 0 17 0 0]
74 A
79 (74, 5, 5, 0)
[ 0 17 0 0]
CCTGCAGGTTTAGCCTATTTGATTGCCGGACCCGATGCGGTGAACCGAATTTGAGTGCACAGGGGAGGATCAGGAGGTTCTATCAC
idx 14 locidx 741
12 G
17 (12, 5, 5, 0)
[ 0 0 0 23]
19 A
24 (19, 5, 5, 0)
[ 0 23 0 0]
20 C
25 (20, 5, 5, 0)
[23 0 0 0]
30 G
35 (30, 5, 5, 0)
[ 0 0 0 23]
83 G
88 (83, 5, 5, 0)
[ 0 0 0 23]
AGCCTAATGAACGGCTTGCACATCAAGTCTGCACTATCTGCACCATAACGTCTGTATGGTACATTACATATAATATTGCAGGTGCT
idx 14 locidx 742
8 T
13 (8, 5, 5, 0)
[ 0 0 22 0]
25 C
30 (25, 5, 5, 0)
[22 0 0 0]
67 G
72 (67, 5, 5, 0)
[ 0 0 0 22]
TGTATTGTTATAGTCTGGAAGACAGCTGGTATCAGATCTGATGCTTTCCTACGAAGCACATATGTACGGTAGCCGGTGGGGCATTG
idx 14 locidx 743
3 C
8 (3, 5, 5, 0)
[18 0 0 0]
18 T
22 (18, 5, 5, 1)
[ 0 0 18 0]
29 A
33 (29, 5, 5, 1)
[ 0 18 0 0]
57 T
60 (57, 5, 5, 2)
[ 0 0 18 0]
TCTCCTG-AATGCGGCGCTAAGTATAAGCAACCGCGTAAGTCA-TTGACCGTTCAAATTTCAAGCATGTCACACGCCGCACTTCGGGC
idx 14 locidx 744
10 G
15 (10, 5, 5, 0)
[ 0 0 0 22]
58 A
63 (58, 5, 5, 0)
[ 0 22 0 0]
78 A
83 (78, 5, 5, 0)
[ 0 22 0 0]
GTACGGACCAGAAATTGATTCGTGGCGACACCGGGGCGGGTCGGCCAAGATTCAACGCAGGGGCCTAAAGCGCACAAAACGTTTTC
idx 14 locidx 745
7 A
12 (7, 5, 5, 0)
[ 0 19 0 0]
25 G
30 (25, 5, 5, 0)
[ 0 0 0 19]
37 A
42 (37, 5, 5, 0)
[ 0 19 0 0]
44 C
49 (44, 5, 5, 0)
[19 0 0 0]
51 T
56 (51, 5, 5, 0)
[ 0 0 19 0]
54 T
59 (54, 5, 5, 0)
[ 0 0 19 0]
56 T
61 (56, 5, 5, 0)
[ 0 0 19 0]
57 G
62 (57, 5, 5, 0)
[ 0 0 0 19]
72 G
77 (72, 5, 5, 0)
[ 0 0 0 19]
75 G
80 (75, 5, 5, 0)
[ 0 0 0 19]
CGCCCGGACAAAATGGTAGTCTATCGGTCCACCCAAGAAGGTATCATGCTATAATTTGTCAGACAGGGTCTCGAGGCCGATTTTCG
idx 14 locidx 746
6 G
11 (6, 5, 5, 0)
[ 0 0 0 26]
37 T
42 (37, 5, 5, 0)
[ 0 0 26 0]
41 T
46 (41, 5, 5, 0)
[ 0 0 26 0]
56 T
61 (56, 5, 5, 0)
[ 0 0 26 0]
57 A
62 (57, 5, 5, 0)
[ 0 26 0 0]
68 C
73 (68, 5, 5, 0)
[26 0 0 0]
72 G
77 (72, 5, 5, 0)
[ 0 0 0 26]
TAGGTTGTGGGGCCATATCCTATTGCATCGGGTTGTCTGAGTAGCATACGGCATAGTAAAGCTGAAACCCGGGAAGGCGGTATCCA
idx 14 locidx 747
31 A
36 (31, 5, 5, 0)
[ 0 22 0 0]
GACTGTCTCGTTGCCTAGCAAAATGAGCGTTACCTGATATCCATAGCCATCTTGCGAATTCTACCTGTTTCGGGGTGTCGTACATC
idx 14 locidx 748
15 T
20 (15, 5, 5, 0)
[ 0 0 23 0]
30 T
35 (30, 5, 5, 0)
[ 0 0 23 0]
43 A
48 (43, 5, 5, 0)
[ 0 23 0 0]
60 A
65 (60, 5, 5, 0)
[ 0 23 0 0]
72 G
77 (72, 5, 5, 0)
[ 0 0 0 23]
74 A
79 (74, 5, 5, 0)
[ 0 23 0 0]
TTGCACCGCCGGTCGTCTGGCTAGTAACTATACAAACAACGTCATCCAATCAGTTTTACTATTACGATAGTGGTATAGAGAATCTC
idx 14 locidx 749
44 T
49 (44, 5, 5, 0)
[ 0 0 22 0]
76 C
81 (76, 5, 5, 0)
[22 0 0 0]
78 T
83 (78, 5, 5, 0)
[ 0 1 21 0]
GTTTCTGCGAGAAACAGCTCGTATCACGACCCTTTGGCTGCCGGTTCTTAGCATGCAATATGTGGGCATAACTTCTCCTACCTTCT
idx 15 locidx 750
19 G
24 (19, 5, 5, 0)
[ 0 0 0 22]
71 T
76 (71, 5, 5, 0)
[ 0 0 22 0]
GCCATACACTAGTCCAAAAGGGTGTGAACCAGTGCCTATAAACAGCATGTCTGATATTTTGGAAGCTTTCTTAAAGGCAATAACTA
idx 15 locidx 751
1 C
6 (1, 5, 5, 0)
[21 1 0 0]
7 S
12 (7, 5, 5, 0)
[14 0 0 8]
GCACCACSGAGATTGTGGATGGGCTATTGGCCAGTAATCTTATCACCCCAATTCAATGATAAACAAAATTTACCGCGTGCGCAGGA
idx 15 locidx 752
7 T
12 (7, 5, 5, 0)
[ 0 0 18 0]
17 T
22 (17, 5, 5, 0)
[ 0 0 18 0]
29 G
34 (29, 5, 5, 0)
[ 0 0 0 18]
30 T
35 (30, 5, 5, 0)
[ 0 0 18 0]
32 C
37 (32, 5, 5, 0)
[18 0 0 0]
63 G
68 (63, 5, 5, 0)
[ 0 0 0 18]
72 G
77 (72, 5, 5, 0)
[ 0 0 0 18]
AATGTCGTCCGACGAGGTGTCACACGGGTGTACGCGCCCGCCTCTGTTCACAGCGCGTGGTTGGACAGGGAAGCCTTTCCCCTCGC
idx 15 locidx 753
38 C
43 (38, 5, 5, 0)
[12 0 0 0]
63 G
68 (63, 5, 5, 0)
[ 0 0 0 12]
78 T
83 (78, 5, 5, 0)
[ 0 0 12 0]
79 A
84 (79, 5, 5, 0)
[ 0 12 0 0]
82 G
87 (82, 5, 5, 0)
[ 0 0 0 12]
AAGATACATTGAGCGTAAGAAACCTCAAGGCCATGGCCCCTCATAGTAGGCACTGCCCTCAGGGACGTTAGAACTCCGTAGAGGCT
idx 15 locidx 754
15 A
20 (15, 5, 5, 0)
[ 0 15 0 0]
19 T
24 (19, 5, 5, 0)
[ 0 0 15 0]
27 A
32 (27, 5, 5, 0)
[ 0 15 0 0]
44 T
49 (44, 5, 5, 0)
[ 0 0 15 0]
61 T
66 (61, 5, 5, 0)
[ 0 0 15 0]
62 C
67 (62, 5, 5, 0)
[15 0 0 0]
76 A
81 (76, 5, 5, 0)
[ 0 15 0 0]
81 C
86 (81, 5, 5, 0)
[15 0 0 0]
CCCATTACCAACGAGAGACTGCGCACTAAAGGTCTAAACAATCCTGCCACTGAGCGGCACATCGATGGGATGTAGTATTACCTTTT
idx 15 locidx 755
24 A
29 (24, 5, 5, 0)
[ 0 17 0 0]
27 G
32 (27, 5, 5, 0)
[ 0 0 0 17]
33 T
38 (33, 5, 5, 0)
[ 0 0 17 0]
73 A
78 (73, 5, 5, 0)
[ 0 17 0 0]
AAGACACGGGACTTCCGCCCGGGAAAAGGGCAATCTTCTACAGTGAGCCGCTGCAGCAACTACTAGCGCGGCAAAAGACCGAGGAA
idx 15 locidx 756
11 A
16 (11, 5, 5, 0)
[ 0 19 0 0]
22 A
27 (22, 5, 5, 0)
[ 0 19 0 0]
41 C
46 (41, 5, 5, 0)
[19 0 0 0]
43 Y
48 (43, 5, 5, 0)
[ 7 0 12 0]
56 G
61 (56, 5, 5, 0)
[ 0 0 0 19]
76 A
81 (76, 5, 5, 0)
[ 0 19 0 0]
84 C
89 (84, 5, 5, 0)
[19 0 0 0]
TCGTTATTAAAACTAATACAAGACATGCCACGTAAAGCACCCTYCACCGGTCTGACGAGATTATGAAATTACACCTAGATCACCCG
idx 15 locidx 757
1 G
6 (1, 5, 5, 0)
[ 0 0 0 18]
12 G
17 (12, 5, 5, 0)
[ 0 0 0 18]
34 A
39 (34, 5, 5, 0)
[ 0 18 0 0]
62 A
67 (62, 5, 5, 0)
[ 0 18 0 0]
83 C
88 (83, 5, 5, 0)
[18 0 0 0]
TGATTTCGATCGGCATCCACCCTTTAGAACCAGCAGAAGCCGGCCTACGCATTAGGGCAACAACACCGATGCAAAGTGCTGGCCGT
idx 15 locidx 758
12 A
17 (12, 5, 5, 0)
[ 1 19 0 0]
55 A
60 (55, 5, 5, 0)
[ 0 20 0 0]
GATGGCCGAGTAAAGAATGAGGTTCACAAATTTTATCACCACAAATCTTAAGAGAACATGGCATATCAAATTGAGGAGTCATCCTG-
idx 15 locidx 759
0 T
5 (0, 5, 5, 0)
[ 0 0 22 0]
1 A
6 (1, 5, 5, 0)
[ 0 22 0 0]
23 G
28 (23, 5, 5, 0)
[ 0 0 0 22]
39 G
44 (39, 5, 5, 0)
[ 0 0 0 22]
45 G
50 (45, 5, 5, 0)
[ 0 0 0 22]
TAAAAGTACGAGTCGGCTATAAGGTTAAGCGTGAAAGATGGGGGTGACATCTTGTAAACGCCACGTAATGCTGAGGTCATTTAAAA
idx 15 locidx 760
14 T
19 (14, 5, 5, 0)
[ 0 0 23 0]
31 A
36 (31, 5, 5, 0)
[ 0 23 0 0]
45 G
50 (45, 5, 5, 0)
[ 0 0 0 23]
76 T
81 (76, 5, 5, 0)
[ 0 0 23 0]
84 R
89 (84, 5, 5, 0)
[ 0 12 0 11]
85 w
90 (85, 5, 5, 0)
[ 0 11 12 0]
CCGCTCGGCCAATATCCTAATAATATTCATTAGATGCCACTAACTGTCCACCATCTTGTATTGGTATACTGCAAGTTGGAGGCARw
idx 15 locidx 761
51 G
56 (51, 5, 5, 0)
[ 0 0 0 15]
64 A
69 (64, 5, 5, 0)
[ 0 15 0 0]
70 T
75 (70, 5, 5, 0)
[ 0 0 15 0]
83 A
88 (83, 5, 5, 0)
[ 0 15 0 0]
TATCACCACGTATCTTTCTGAGTATAATCTCTTGCCATGGCCGAATCGAGTGGGTACGGGGAGAAACGCATGATCTTATTAATAGA
idx 15 locidx 762
15 A
20 (15, 5, 5, 0)
[ 0 20 0 0]
21 S
26 (21, 5, 5, 0)
[12 0 0 8]
35 T
40 (35, 5, 5, 0)
[ 0 0 20 0]
42 G
47 (42, 5, 5, 0)
[ 0 0 0 20]
52 G
57 (52, 5, 5, 0)
[ 0 0 0 20]
59 T
64 (59, 5, 5, 0)
[ 0 0 20 0]
66 A
71 (66, 5, 5, 0)
[ 0 20 0 0]
69 T
74 (69, 5, 5, 0)
[ 0 0 20 0]
75 C
80 (75, 5, 5, 0)
[20 0 0 0]
79 T
84 (79, 5, 5, 0)
[ 0 0 20 0]
81 A
86 (81, 5, 5, 0)
[ 0 20 0 0]
AGGTCTATTTGATAAATAAAASAACGAGTTGGAGATTTTACTGCATACTAGTGATTTTCTGCGTCAATCTGGGTGCTTATAAAGCG
idx 15 locidx 763
15 C
20 (15, 5, 5, 0)
[18 0 0 0]
44 A
49 (44, 5, 5, 0)
[ 0 18 0 0]
76 C
81 (76, 5, 5, 0)
[18 0 0 0]
80 A
85 (80, 5, 5, 0)
[ 0 18 0 0]
TCCGTTATACGACTTCGGTTCGAGGGCTGATCTCCAAGCAGGAAACATAGTGGAGCGCGAGGTATCATCCAAGGCTCAAGATCGCT
idx 15 locidx 764
2 G
7 (2, 5, 5, 0)
[ 0 0 0 23]
36 T
41 (36, 5, 5, 0)
[ 0 0 23 0]
50 A
55 (50, 5, 5, 0)
[ 0 23 0 0]
GGGTCTATAACCCGTAGAGCGGTTCTCCGCGCTGTCTCAAAAACTTGCGTAGAGCCGGTCCTGATCTGTACGTAGCATTATGAATC
idx 15 locidx 765
13 A
18 (13, 5, 5, 0)
[ 0 20 0 0]
24 A
29 (24, 5, 5, 0)
[ 0 20 0 0]
29 A
34 (29, 5, 5, 0)
[ 0 20 0 0]
37 C
42 (37, 5, 5, 0)
[20 0 0 0]
60 C
65 (60, 5, 5, 0)
[20 0 0 0]
TCAATAACATGTAATCAGCTGATAATAACATAGAATACGGATTCCATCAGCACTTGAGAGCGCCCCGAAGATAGATAGAGCCCCAC
idx 15 locidx 766
1 T
6 (1, 5, 5, 0)
[ 0 0 20 0]
51 C
56 (51, 5, 5, 0)
[20 0 0 0]
52 T
57 (52, 5, 5, 0)
[ 0 0 20 0]
83 A
88 (83, 5, 5, 0)
[ 0 20 0 0]
GTCGAGTGCAGCGTTGGTTGAAGGCGCTACCCGAGTACAGGTTAATACGTTCTACGGCTTAAGCGTCCTTCCTATGTGTCTTCACA
idx 15 locidx 767
2 A
7 (2, 5, 5, 0)
[ 0 19 0 0]
4 G
9 (4, 5, 5, 0)
[ 0 0 0 19]
5 C
10 (5, 5, 5, 0)
[19 0 0 0]
14 A
19 (14, 5, 5, 0)
[ 0 19 0 0]
49 C
54 (49, 5, 5, 0)
[19 0 0 0]
ACATGCCAAAAACCACAACTAGATACCGTTGAGTAGACCAGCGTGCAATCAGGTCCACGTCAAATAAGACGAAAATAGTCGGTATC
idx 15 locidx 768
57 G
62 (57, 5, 5, 0)
[ 0 0 0 19]
58 C
63 (58, 5, 5, 0)
[19 0 0 0]
81 G
86 (81, 5, 5, 0)
[ 0 0 0 19]
AAATACCCAGTCGCTTACCCTGTTGAGGTATGCAGGTTAAAAACACAGTGTGGGGGTGCATGACGAGCATATGGGGGGAGGGATAA
idx 15 locidx 769
1 T
6 (1, 5, 5, 0)
[ 0 0 17 0]
32 G
37 (32, 5, 5, 0)
[ 0 0 0 17]
85 G
90 (85, 5, 5, 0)
[ 0 0 0 17]
TTCAATGTGTTCCTTACCCCCGTCTTGTTTCTGTCTTAGGATACTCCATACCTCCCGCGCAATCCGTGTCGCACTGTCACACTGGG
idx 15 locidx 770
32 G
37 (32, 5, 5, 0)
[ 0 0 0 17]
34 T
39 (34, 5, 5, 0)
[ 0 0 17 0]
51 T
56 (51, 5, 5, 0)
[ 0 0 17 0]
60 C
65 (60, 5, 5, 0)
[17 0 0 0]
GCGAGTCGCTGTTGTCCTTAAGCCCGATATAAGATAAGTGTCACGATACTCTTGTATACACGGACTGCTACGTGGACGGAATATCG
idx 15 locidx 771
20 G
25 (20, 5, 5, 0)
[ 0 0 0 23]
85 T
90 (85, 5, 5, 0)
[ 0 0 23 0]
CCGCTTGAACAAACCTTTCTGATTGTTACTCCGGCTCATATTGTGCAAGGAGGGGCTATGTAGCGCTTGTACGGTTTAGGGGTGGT
idx 15 locidx 772
85 T
89 (85, 5, 5, 1)
[ 0 0 20 0]
TTCGGCGGTGACATACAATCACTCCGCGACAGCAGGCAGTGGTGCCAAACCGAATCGGGGATGGCTCGGCGCTAACTACCTGA-GTG
idx 15 locidx 773
7 A
12 (7, 5, 5, 0)
[ 0 21 0 0]
11 C
16 (11, 5, 5, 0)
[21 0 0 0]
50 S
55 (50, 5, 5, 0)
[12 0 0 9]
54 A
59 (54, 5, 5, 0)
[ 0 21 0 0]
66 C
71 (66, 5, 5, 0)
[21 0 0 0]
CCTCACTACTGCTTGACGGACCACAACAGAAACTTTATGGCAGCGCTCGCSAATAGGCGCAGGGCTCAAGATTCGGGTATGGTACC
idx 15 locidx 774
22 C
27 (22, 5, 5, 0)
[23 0 0 0]
34 T
39 (34, 5, 5, 0)
[ 0 0 23 0]
38 T
43 (38, 5, 5, 0)
[ 0 0 23 0]
63 C
68 (63, 5, 5, 0)
[23 0 0 0]
81 T
86 (81, 5, 5, 0)
[ 0 0 23 0]
AGACCTCTGGCAGAGCCTCTGCCTAGGCGCCACGTCCATTAGTGACGGTTTTACACAGTTTAACGTATCAGGGGACTATGCTATCG
idx 15 locidx 775
55 A
60 (55, 5, 5, 0)
[ 0 21 0 0]
GGCGAACAACGTGCTCCCATTACACGGGATTAGCGGAGAACTTTCAGACCGTCCTATAAAAAGGCTCTTACGCGAATGTCGGATTT
idx 15 locidx 776
27 A
32 (27, 5, 5, 0)
[ 0 18 1 0]
50 G
55 (50, 5, 5, 0)
[ 0 0 0 19]
53 T
58 (53, 5, 5, 0)
[ 0 0 19 0]
CGGAAATCAATTAGCTACTGATCTGACAGTTGCCCCCGTTCGTGTACGTAGTGTTTAGAGGGTGTAACTTATATTACCAGATTGTT
idx 15 locidx 777
11 A
16 (11, 5, 5, 0)
[ 0 18 1 0]
44 T
49 (44, 5, 5, 0)
[ 0 0 19 0]
72 T
77 (72, 5, 5, 0)
[ 0 0 19 0]
TTTCTTCTCACAGTTAATACAGTCCTGTTGTTCAGGTCAGACTATCCGGGGCCGGGCTCACGGGTAAAACATTTCCGCGCACTTTG
idx 15 locidx 778
4 C
9 (4, 5, 5, 0)
[21 0 0 0]
20 G
25 (20, 5, 5, 0)
[ 0 0 0 21]
22 G
27 (22, 5, 5, 0)
[ 0 0 0 21]
32 G
37 (32, 5, 5, 0)
[ 0 0 0 21]
48 G
53 (48, 5, 5, 0)
[ 0 0 0 21]
64 T
69 (64, 5, 5, 0)
[ 0 0 21 0]
TTGTCGGCGTGGCGAAAGACGGGCCGAGTTTGGATTAACAGAGATCCGGACCATACGCAGAGGGTTGGCGCTCGTCCCATGGTTAT
idx 15 locidx 779
2 T
7 (2, 5, 5, 0)
[ 0 0 23 0]
22 G
27 (22, 5, 5, 0)
[ 0 0 0 23]
46 A
51 (46, 5, 5, 0)
[ 0 23 0 0]
79 A
84 (79, 5, 5, 0)
[ 0 23 0 0]
GCTTTGGCTCGGCATCTCTACCGGGACCATCAAAGTTGACTCACTTAAGGTTAACCCACGCTCTCCCTAGTGGAGAAGTACTAAAC
idx 15 locidx 780
46 A
51 (46, 5, 5, 0)
[ 0 25 0 0]
49 A
54 (49, 5, 5, 0)
[ 0 25 0 0]
TTCAGTTTGGGTCCACTTTACTCTCTGGGCATTCTGTGACCTCCCAAGGAGCGTCATCGACCCCTTTGCGGGAGCTGCCGTTCCAG
idx 15 locidx 781
6 G
11 (6, 5, 5, 0)
[ 0 0 0 16]
20 T
25 (20, 5, 5, 0)
[ 0 0 16 0]
21 T
26 (21, 5, 5, 0)
[ 0 0 16 0]
69 G
74 (69, 5, 5, 0)
[ 0 0 0 16]
71 G
76 (71, 5, 5, 0)
[ 0 0 0 16]
83 C
88 (83, 5, 5, 0)
[16 0 0 0]
CACTAGGACCCCCATATAGGTTATAGGGTTGCTATGTATAAGCCGTCGGCAAATTCCGCGAACGCTGTCGCGTCCAGCTTAATCAC
idx 15 locidx 782
10 A
15 (10, 5, 5, 0)
[ 0 21 0 0]
67 G
72 (67, 5, 5, 0)
[ 0 0 0 21]
ATCTGATAATATTGCGGATCTTACGCATGTTCACAGTGGACACTCATTTTGAATCAAACACGATATCGTTTGACGAACTACTATAA
idx 15 locidx 783
3 T
8 (3, 5, 5, 0)
[ 0 0 18 0]
30 G
34 (30, 5, 5, 1)
[ 0 0 0 18]
41 A
44 (41, 5, 5, 2)
[ 0 18 0 0]
48 -
51 (48, 5, 5, 2)
[18 0 0 0]
52 G
54 (52, 5, 5, 3)
[ 0 0 0 18]
60 T
62 (60, 5, 5, 3)
[ 0 0 18 0]
CTCTGGAGGTACTTAATGACAGCCCG-GGGGTGC-CTTCGGACAAATT-CAGGTTCGACGTGTGTGGAACCGGAGCTGATAATTTC
idx 15 locidx 784
20 C
25 (20, 5, 5, 0)
[25 0 0 0]
33 G
38 (33, 5, 5, 0)
[ 0 0 0 25]
50 A
55 (50, 5, 5, 0)
[ 0 25 0 0]
TTTGATCAACATTGTACCTGCAAGTTCTGCCAAGCTACAAGACGGGGACTAGCCAGGATAGACTATTGAGAACTTATATAAGGGTG
idx 15 locidx 785
18 T
23 (18, 5, 5, 0)
[ 0 0 20 0]
39 T
44 (39, 5, 5, 0)
[ 0 0 20 0]
66 A
71 (66, 5, 5, 0)
[ 0 20 0 0]
TGCTATGTTTGTTGACGATGTAATTTATTCCGTAACCACTCCTGTAGGGACTCGATCGAGCAAGATAGCCTCTGCGAGAATTAGAA
idx 15 locidx 786
36 A
41 (36, 5, 5, 0)
[ 0 24 0 0]
44 C
49 (44, 5, 5, 0)
[24 0 0 0]
63 A
68 (63, 5, 5, 0)
[ 0 24 0 0]
65 A
70 (65, 5, 5, 0)
[ 0 24 0 0]
79 T
84 (79, 5, 5, 0)
[ 0 0 24 0]
TGTACATGGGGCCAACCGGCCAAGCCTGTTCGAATCAGGCCCCTCGCAGGGTGAATTGGTCAAAGATCCCAATTGTTCCTGCGGTA
idx 15 locidx 787
35 T
40 (35, 5, 5, 0)
[ 0 0 21 0]
81 G
86 (81, 5, 5, 0)
[ 0 0 0 21]
CGTGGCGGGGTCCAGGGTACGCGTATCAGCGTTAATTGGAATTTCAAAGGGGCCCAAGCCGTCCATCACAGCATCTTCCGGGAGTA
idx 15 locidx 788
2 C
7 (2, 5, 5, 0)
[18 0 0 0]
15 S
20 (15, 5, 5, 0)
[10 0 0 8]
21 R
26 (21, 5, 5, 0)
[ 0 10 0 8]
24 G
29 (24, 5, 5, 0)
[ 0 0 0 18]
30 G
35 (30, 5, 5, 0)
[ 0 0 0 18]
33 A
38 (33, 5, 5, 0)
[ 0 18 0 0]
41 A
46 (41, 5, 5, 0)
[ 0 18 0 0]
53 r
58 (53, 5, 5, 0)
[ 0 8 0 10]
GACAAGAGCGAACTASAAGCTRGAGGTGAGGTAACAGCGTTATTCCAGATATCrCCGCAAGCCGAGCAGTAGACGCCTGGCATATC
idx 15 locidx 789
9 G
14 (9, 5, 5, 0)
[ 0 0 0 21]
16 T
21 (16, 5, 5, 0)
[ 0 0 21 0]
41 A
46 (41, 5, 5, 0)
[ 0 21 0 0]
44 T
49 (44, 5, 5, 0)
[ 0 0 21 0]
CCTCGATTTGGCCATCTAGTCCCATGGGATACACGCCTCCTAACTTTAGGGAATGCCTGCACTAGCTGACCCTACTCGGATTGGCG
idx 15 locidx 790
45 G
50 (45, 5, 5, 0)
[ 0 0 0 22]
52 A
57 (52, 5, 5, 0)
[ 0 22 0 0]
58 T
61 (58, 5, 5, 2)
[ 0 0 22 0]
68 G
71 (68, 5, 5, 2)
[ 0 0 0 22]
82 A
84 (82, 5, 5, 3)
[ 0 22 0 0]
ATATTCGTGCTAATATAGTCGTCGCCAGCTCCAACCGATGTTGCTGATCGTAAAGA--TGACTCACGGGTTG-TCAGATATGAGCAGGT
idx 15 locidx 791
35 G
40 (35, 5, 5, 0)
[ 0 0 0 22]
38 C
43 (38, 5, 5, 0)
[22 0 0 0]
43 C
48 (43, 5, 5, 0)
[22 0 0 0]
77 G
82 (77, 5, 5, 0)
[ 0 0 0 22]
80 G
85 (80, 5, 5, 0)
[ 0 0 0 22]
ATGCATGACCAGAGTTGCACGACTGGTAACCCATCGGACATCACCAATTGAACGTTTCTAGCGAGAGCAAGCTCTCTGTGGACAGT
idx 15 locidx 792
0 G
5 (0, 5, 5, 0)
[ 1 0 0 20]
35 T
40 (35, 5, 5, 0)
[ 0 0 21 0]
45 T
50 (45, 5, 5, 0)
[ 0 0 21 0]
54 A
59 (54, 5, 5, 0)
[ 0 21 0 0]
73 A
78 (73, 5, 5, 0)
[ 0 21 0 0]
80 C
85 (80, 5, 5, 0)
[21 0 0 0]
GATGGGTCTAGGATGACCGTCGTGTACTAGCTAAGTTGTGGTAACTTTGTACTCAAAGAGGGCGACCGCTCACATCGTGTCTACTA
idx 15 locidx 793
0 T
5 (0, 5, 5, 0)
[ 0 0 16 0]
84 C
89 (84, 5, 5, 0)
[16 0 0 0]
TGAATCCAGGTCACTCCCTTCGAGGCGAGCGTTAATGGTGGGCTCTAAGCTGGATCCTATGCCGGCTGTTGGGGCACGCCCATTCG
idx 15 locidx 794
1 A
6 (1, 5, 5, 0)
[ 0 21 0 0]
44 G
49 (44, 5, 5, 0)
[ 0 0 0 21]
66 T
71 (66, 5, 5, 0)
[ 0 0 21 0]
70 T
75 (70, 5, 5, 0)
[ 0 0 21 0]
82 T
87 (82, 5, 5, 0)
[ 0 0 21 0]
84 C
89 (84, 5, 5, 0)
[21 0 0 0]
GAAACGTAATTATCGCTCGCCAGTCTTTATTCCTATATGGCAGGGGCGCAGCTATATGGTAGTACATCCTTTGACATAATTGTACC
idx 15 locidx 795
17 G
22 (17, 5, 5, 0)
[ 0 0 0 22]
18 T
23 (18, 5, 5, 0)
[ 0 0 22 0]
41 C
46 (41, 5, 5, 0)
[22 0 0 0]
47 T
52 (47, 5, 5, 0)
[ 0 0 22 0]
49 C
54 (49, 5, 5, 0)
[22 0 0 0]
63 A
68 (63, 5, 5, 0)
[ 0 22 0 0]
71 Y
76 (71, 5, 5, 0)
[11 0 10 1]
79 G
84 (79, 5, 5, 0)
[ 0 0 0 22]
GGCGAGCGGCCAGGTCTGTTGAAGGACGTAGTTGCAGGGAACACAAGTTCCTTCTATAGCATTACTTCAGCYAAAAGTTGTAAGCT
idx 15 locidx 796
14 A
19 (14, 5, 5, 0)
[ 0 16 0 0]
34 G
39 (34, 5, 5, 0)
[ 0 0 0 16]
49 G
54 (49, 5, 5, 0)
[ 0 0 0 16]
75 T
80 (75, 5, 5, 0)
[ 0 0 16 0]
TCCGAGCCATCCTCAAACCCCACCCGACCTGTGCGAACGCTCTTAATTCGTGTCAGGGCTCACGCGAACGCAGATTTGAGATTCTG
idx 15 locidx 797
13 C
18 (13, 5, 5, 0)
[23 0 0 0]
24 A
29 (24, 5, 5, 0)
[ 0 23 0 0]
43 T
48 (43, 5, 5, 0)
[ 0 0 23 0]
75 C
80 (75, 5, 5, 0)
[23 0 0 0]
AACTTGACCAAGCCTGTACTTTATACTCCTGGGGGTAACCTCGTCCTGTAAGCTGAAGCAATGATATCAAACCTGCTAAATTGTAT
idx 15 locidx 798
13 C
18 (13, 5, 5, 0)
[19 0 0 0]
CGCATGTCTTCGTCATTTCCTGCTCATCGATCCTTTACAATGATTCACCGTGTTCTTGTTGTGGCACAATGTGCACTACCCGGCCA
idx 15 locidx 799
25 T
30 (25, 5, 5, 0)
[ 0 0 17 0]
45 G
50 (45, 5, 5, 0)
[ 0 0 0 17]
69 G
74 (69, 5, 5, 0)
[ 0 0 0 17]
80 T
85 (80, 5, 5, 0)
[ 0 0 17 0]
CTAACTCGACTCGAAGTTCCTGGCATTACGGCCGAAGTACCCCAAGCCCTTCCTTCTTGGATACTATGAGCGGATGTGTGTTGTCG
idx 16 locidx 800
4 C
9 (4, 5, 5, 0)
[23 0 0 0]
6 A
11 (6, 5, 5, 0)
[ 0 23 0 0]
7 A
12 (7, 5, 5, 0)
[ 0 23 0 0]
22 A
27 (22, 5, 5, 0)
[ 0 23 0 0]
55 T
60 (55, 5, 5, 0)
[ 0 0 23 0]
76 A
81 (76, 5, 5, 0)
[ 0 23 0 0]
CACTCCAATGGTCAGTGTTGTAAGGAGTGAGCAAAATTAGTTCGTGGTTCTTCGGTACGCACTGCGAAATGGACGCATGTGACGGT
idx 16 locidx 801
27 G
32 (27, 5, 5, 0)
[ 0 0 0 21]
34 T
39 (34, 5, 5, 0)
[ 0 0 21 0]
42 G
47 (42, 5, 5, 0)
[ 0 0 0 21]
79 C
84 (79, 5, 5, 0)
[21 0 0 0]
TAATTCCCGCCCTGCAGTCTACAAGCCGAATCCATGGTAAAGGACGGCTCTCCCGCACTCCGTTATGCGCCTGGTTGATCCAGGGC
idx 16 locidx 802
25 C
30 (25, 5, 5, 0)
[20 0 0 0]
47 C
52 (47, 5, 5, 0)
[20 0 0 0]
54 R
59 (54, 5, 5, 0)
[ 0 8 0 12]
CCCGAATTCTACAGCCGGAAGGACCCTGGGGAGTGCCAGTACATCCCCCAGCTGRTACAATACATTCAATATCATCGGTTATTAAA
NOT HERE
idx 16 locidx 804
51 A
56 (51, 5, 5, 0)
[ 0 18 0 0]
65 T
70 (65, 5, 5, 0)
[ 0 0 18 0]
81 A
86 (81, 5, 5, 0)
[ 0 18 0 0]
GCCGTTGTAGTGGAAATTTAGGGTCTTAGTGTCCAGAAAGCCGTACGGATGACTCCCGGACGCTATCCGGAGTCAGATTCCAACGT
idx 16 locidx 805
9 T
14 (9, 5, 5, 0)
[ 0 0 19 0]
17 G
22 (17, 5, 5, 0)
[ 0 0 0 19]
22 G
27 (22, 5, 5, 0)
[ 0 0 0 19]
42 C
47 (42, 5, 5, 0)
[19 0 0 0]
GACGGCAAATATGACTCGAGAGGCCCATGTTAAGTAAGTACTCGGTCAGATACGCGACAATCCTGCTGGTTCGTGACGCCCGTCCT
idx 16 locidx 806
19 A
24 (19, 5, 5, 0)
[ 0 20 0 0]
37 T
42 (37, 5, 5, 0)
[ 0 0 20 0]
38 C
43 (38, 5, 5, 0)
[20 0 0 0]
79 T
84 (79, 5, 5, 0)
[ 0 0 20 0]
CTTAGAATCGTTACAGATCAGTTGGCGCGATAGCACGTCACACGTAGTAGGAACCTCGTCAAAATGCACAAATGGGCGGTCGTCTG
idx 16 locidx 807
2 T
7 (2, 5, 5, 0)
[ 0 0 19 0]
23 C
28 (23, 5, 5, 0)
[19 0 0 0]
28 C
33 (28, 5, 5, 0)
[19 0 0 0]
48 C
53 (48, 5, 5, 0)
[19 0 0 0]
52 T
57 (52, 5, 5, 0)
[ 0 0 19 0]
TGTGTGCTGTTGCACTGCGATAACGTAACGCGGCGTGTGGTTTTACGACGCATTGTACCTAGTGGGTGCCCCCGGGCGCGCTTCAG
idx 16 locidx 808
18 G
23 (18, 5, 5, 0)
[ 0 0 0 18]
59 G
64 (59, 5, 5, 0)
[ 0 0 0 18]
68 G
73 (68, 5, 5, 0)
[ 0 0 0 18]
GTGCAGTGCTAGTAGCACGTTCGTCGGGCCCCCGCCGTGACCTGTTGATCAAAGAAGCCGAACGGACGGGAGGGATAGCAGCACCG
NOT HERE
idx 16 locidx 810
24 A
29 (24, 5, 5, 0)
[ 0 20 0 0]
76 A
81 (76, 5, 5, 0)
[ 0 20 0 0]
84 T
89 (84, 5, 5, 0)
[ 0 0 20 0]
GCCTGTCAGCCTTCTAAACAGGCAACGCGAAAGGGTGAATTACGTGGAGTAGAGGGCCATACTCAGTTGTCGAAGAATACTCTTTG
idx 16 locidx 811
37 Y
42 (37, 5, 5, 0)
[11 0 13 0]
51 A
56 (51, 5, 5, 0)
[ 0 24 0 0]
53 A
58 (53, 5, 5, 0)
[ 0 24 0 0]
TGGAGTACATAAGAGATTTAGGGTTTTGTAGATCTTTYTTCCGAGGAGGGCAGATCCGACGAACGCCTACACCCGCGCTCTATAGG
idx 16 locidx 812
31 C
36 (31, 5, 5, 0)
[19 0 0 0]
59 T
64 (59, 5, 5, 0)
[ 0 0 19 0]
76 A
81 (76, 5, 5, 0)
[ 0 19 0 0]
TACCCGGGGGCTCTTTGTCCCTCACCGAGAGCTATGTCAACAGAATTACTTGGGGCTTCTCCGACGGAGATTGGATATCCATATCA
idx 16 locidx 813
54 T
59 (54, 5, 5, 0)
[ 0 0 21 0]
75 G
80 (75, 5, 5, 0)
[ 0 0 0 21]
CATGGGGACTTGCTTCGGAGGGTGGGTACATTCCGGCTGCTCCGGAGGCCCCTATTCCGCGTCGTGCGGGTGTACGTAGCGACC-TA
idx 16 locidx 814
43 T
48 (43, 5, 5, 0)
[ 0 0 20 0]
47 T
52 (47, 5, 5, 0)
[ 0 0 20 0]
49 A
54 (49, 5, 5, 0)
[ 0 20 0 0]
68 S
73 (68, 5, 5, 0)
[11 0 0 9]
AAAGCAGCACTATTCTATTAGGTCGATGGATGGTTTGCGGACATTGTTTACTTCCTGATATCTTGATGSTTGACTCGGTATATCTT
idx 16 locidx 815
26 A
31 (26, 5, 5, 0)
[ 0 17 0 0]
30 A
35 (30, 5, 5, 0)
[ 0 17 0 0]
CAGCATCATGGCGCGAACAACGTGGGAGTGACGTGGGCAGACGACCTCACTAGCGGAGACTATGGTAGCTCCAGTGAGGATGGCAA
idx 16 locidx 816
11 T
16 (11, 5, 5, 0)
[ 0 0 24 0]
28 C
33 (28, 5, 5, 0)
[24 0 0 0]
53 T
58 (53, 5, 5, 0)
[ 0 0 24 0]
59 M
64 (59, 5, 5, 0)
[12 12 0 0]
64 G
69 (64, 5, 5, 0)
[ 0 0 0 24]
81 A
86 (81, 5, 5, 0)
[ 0 24 0 0]
CAGTTAGGCAGTCGTAAGTTCAAGTAGCCGGGCAGGTCAATGCCAGGCATCAATATGTTMAATAGGTTACGCCATCATTAAAAGTC
idx 16 locidx 817
0 A
5 (0, 5, 5, 0)
[ 0 23 0 0]
3 A
8 (3, 5, 5, 0)
[ 0 23 0 0]
26 C
31 (26, 5, 5, 0)
[23 0 0 0]
69 S
74 (69, 5, 5, 0)
[12 0 0 11]
ACCATGAATACCGGTTCGTGCTGTAACGTGCCTGCATGGGATTGCTCACATTTGCTTGCTTGCTCGAAASTGGGTAAAGTTAGCGA
idx 16 locidx 818
82 G
87 (82, 5, 5, 0)
[ 0 0 0 23]
CAGTAAGCGGAACACCCACAATCGAAACAATGAGCCAAGCAATCACGATCACGCGTTGCGACAGCTTGTCTTAATAAATATAGCCC
idx 16 locidx 819
26 A
31 (26, 5, 5, 0)
[ 0 23 0 0]
AACGCCGGCGGTGAAGCCACTCAGGTAACCATCTGCGAGTTATTAACTTTATTCGCCCACGCCGCCTTGCTGGTCCACGTCCGCCC
idx 16 locidx 820
23 G
28 (23, 5, 5, 0)
[ 0 0 0 14]
27 G
32 (27, 5, 5, 0)
[ 0 0 0 14]
51 M
56 (51, 5, 5, 0)
[6 8 0 0]
67 A
72 (67, 5, 5, 0)
[ 0 14 0 0]
73 A
78 (73, 5, 5, 0)
[ 0 14 0 0]
76 C
81 (76, 5, 5, 0)
[14 0 0 0]
79 T
84 (79, 5, 5, 0)
[ 0 0 14 0]
82 C
87 (82, 5, 5, 0)
[14 0 0 0]
AAGCATAGACCTCAGTAGTAAGCGGCTGCTTGGGTACGTTCCTCGTGTCTCMTTCAACTTTCCACTCAAGCACATTCTATAGCTCT
idx 16 locidx 821
20 A
25 (20, 5, 5, 0)
[ 0 21 0 0]
51 C
56 (51, 5, 5, 0)
[21 0 0 0]
GGGTGACGTTCAAAGGCGCGACCACTGATAGTTCCCCCGTCCTCTCTAGCCCGCAGGTGCCAATCTTGGACATACGATTTGAGGGA
idx 16 locidx 822
8 T
13 (8, 5, 5, 0)
[ 0 0 22 0]
25 C
30 (25, 5, 5, 0)
[22 0 0 0]
40 A
45 (40, 5, 5, 0)
[ 0 22 0 0]
43 T
48 (43, 5, 5, 0)
[ 0 0 22 0]
45 A
50 (45, 5, 5, 0)
[ 0 22 0 0]
58 T
63 (58, 5, 5, 0)
[ 0 0 22 0]
70 C
75 (70, 5, 5, 0)
[22 0 0 0]
72 T
77 (72, 5, 5, 0)
[ 0 0 22 0]
81 C
86 (81, 5, 5, 0)
[22 0 0 0]
TTGTCAACTGAGGCGCCACTGTTAACTACCTAGCCGCCAAAAATGAGAGGCTTATTAGTCGCCGGGAAGCCTTAGGAGGCTCCCTT
idx 16 locidx 823
13 G
18 (13, 5, 5, 0)
[ 0 0 0 19]
18 C
23 (18, 5, 5, 0)
[19 0 0 0]
61 C
66 (61, 5, 5, 0)
[19 0 0 0]
78 G
83 (78, 5, 5, 0)
[ 0 0 0 19]
80 A
85 (80, 5, 5, 0)
[ 0 19 0 0]
GACTGCGAATGACGGTGGCTAGTACTCGAGGAAGGGTCGCACCGCAGTAAGCTAATCTGACCCTCTGGAGCGCGTACCGTACGAAG
idx 16 locidx 824
30 T
35 (30, 5, 5, 0)
[ 0 0 18 0]
31 C
36 (31, 5, 5, 0)
[18 0 0 0]
32 T
37 (32, 5, 5, 0)
[ 0 0 18 0]
33 A
38 (33, 5, 5, 0)
[ 0 18 0 0]
50 A
55 (50, 5, 5, 0)
[ 0 18 0 0]
80 C
85 (80, 5, 5, 0)
[18 0 0 0]
81 A
86 (81, 5, 5, 0)
[ 0 18 0 0]
82 C
87 (82, 5, 5, 0)
[18 0 0 0]
83 G
88 (83, 5, 5, 0)
[ 0 0 0 18]
84 G
89 (84, 5, 5, 0)
[ 0 0 0 18]
CAAGAGCTCACAACCAGGGGAGTAAAAATTTCTAAGATATTGAGCTAACAATTGTACCAAAGGGGCGTCGATCTTCTCGCCACGGC
idx 16 locidx 825
20 C
25 (20, 5, 5, 0)
[21 0 0 0]
49 C
54 (49, 5, 5, 0)
[21 0 0 0]
53 C
58 (53, 5, 5, 0)
[21 0 0 0]
54 T
59 (54, 5, 5, 0)
[ 0 0 21 0]
80 T
85 (80, 5, 5, 0)
[ 0 0 21 0]
AGGATTGCTACAGAACCAGACTTGGGCATGTAGAAATTTTAATCCCGCACTATCTCCCGACCATAGGCGAAGGATCATTATCTCAA
idx 16 locidx 826
13 C
18 (13, 5, 5, 0)
[23 0 0 0]
18 C
23 (18, 5, 5, 0)
[23 0 0 0]
20 G
25 (20, 5, 5, 0)
[ 0 0 0 23]
29 G
34 (29, 5, 5, 0)
[ 0 0 0 23]
32 T
37 (32, 5, 5, 0)
[ 0 0 23 0]
37 G
42 (37, 5, 5, 0)
[ 0 0 0 23]
43 G
48 (43, 5, 5, 0)
[ 0 0 0 23]
55 G
60 (55, 5, 5, 0)
[ 0 0 0 23]
65 T
70 (65, 5, 5, 0)
[ 0 0 23 0]
69 G
74 (69, 5, 5, 0)
[ 0 0 0 23]
TGCCTCGACTGTGCGCGTCCGCTGAATAAGGGTTGCAGCTCTCGACTAGAAGATAGGTGCTCTCTTCGCGCCAGGATGGAACCAGC
idx 16 locidx 827
3 A
8 (3, 5, 5, 0)
[ 0 17 0 0]
35 G
40 (35, 5, 5, 0)
[ 0 0 0 17]
37 G
42 (37, 5, 5, 0)
[ 0 0 0 17]
63 A
68 (63, 5, 5, 0)
[ 0 17 0 0]
TCCAGATTGAACACTTTACTCAATTCTGGCTAGGGGAGCGGGGTTCCACTCCATGACCCCCTCAATTAGAGTCATTTTGTTTACTC
idx 16 locidx 828
44 T
49 (44, 5, 5, 0)
[ 0 0 22 0]
59 T
64 (59, 5, 5, 0)
[ 0 0 22 0]
69 A
74 (69, 5, 5, 0)
[ 0 22 0 0]
74 T
79 (74, 5, 5, 0)
[ 0 0 22 0]
80 C
85 (80, 5, 5, 0)
[22 0 0 0]
84 G
89 (84, 5, 5, 0)
[ 0 0 0 22]
CGGCAACGAGCAACTGATTGCAGTACATATGTGGCGTAACAACTTCGCTAGCCGCTGCGTCGAATACGAACGATTTACCTCGCCGG
idx 16 locidx 829
21 A
26 (21, 5, 5, 0)
[ 0 18 0 0]
29 G
34 (29, 5, 5, 0)
[ 0 0 0 18]
33 T
38 (33, 5, 5, 0)
[ 0 0 18 0]
70 K
75 (70, 5, 5, 0)
[ 0 0 8 10]
74 C
79 (74, 5, 5, 0)
[18 0 0 0]
CCGGCGTTTGATACACACGTCAGAGATTCGAATTTCGGGCGGTGCGAATTTTTCGGTTGCTTGAATCCCCKGTTCAAACTAGTGCC
idx 16 locidx 830
7 C
12 (7, 5, 5, 0)
[22 0 0 0]
22 G
27 (22, 5, 5, 0)
[ 0 0 0 22]
GCGGCCTCTTAATTGTTTACCAGCTGCTTAGTAGAAATACTATTCACTTAAAACCCTGAACCCCCCCGCGAGAAGGAGGCGTAAGA
idx 16 locidx 831
7 T
12 (7, 5, 5, 0)
[ 0 0 20 0]
29 G
34 (29, 5, 5, 0)
[ 0 0 0 20]
38 T
43 (38, 5, 5, 0)
[ 0 0 20 0]
43 C
48 (43, 5, 5, 0)
[20 0 0 0]
46 T
51 (46, 5, 5, 0)
[ 0 0 20 0]
75 A
80 (75, 5, 5, 0)
[ 0 20 0 0]
TGACGGATAGGGGCACGCTGCCTTTAACAGGCCCGTCCTGTGACGATACGAACAAGATCAAGACGCGAGATGTTTATATCTTGTAC
idx 16 locidx 832
45 C
50 (45, 5, 5, 0)
[18 0 0 0]
56 G
61 (56, 5, 5, 0)
[ 0 0 0 18]
60 A
65 (60, 5, 5, 0)
[ 0 18 0 0]
CGCTGCTAGTACCTGATCAACGAACGGGCCTGGGTTTGGTTATGTCAGTCGCAGTGGTTTAGACGTAGGGTTTTTCGAAAAGATCT
idx 16 locidx 833
5 C
10 (5, 5, 5, 0)
[19 0 0 0]
11 T
16 (11, 5, 5, 0)
[ 0 0 19 0]
17 G
22 (17, 5, 5, 0)
[ 0 0 0 19]
71 G
76 (71, 5, 5, 0)
[ 0 0 0 19]
77 G
82 (77, 5, 5, 0)
[ 0 0 0 19]
GGCACCTTTTCTACCATGGGTTCGGGTTCCTGCTCCGCCGTGTGCCATTTGTGAGCCCTGGGCGTGTAGGCGTCTCCGTGCGTACA
idx 16 locidx 834
26 G
31 (26, 5, 5, 0)
[ 0 0 0 22]
38 C
43 (38, 5, 5, 0)
[22 0 0 0]
51 A
56 (51, 5, 5, 0)
[ 0 22 0 0]
79 G
84 (79, 5, 5, 0)
[ 0 0 0 22]
85 A
90 (85, 5, 5, 0)
[ 0 22 0 0]
TATGTACGTGTCGGAGGCACGTGTGTGGGATGGGTCGTCAGGACTAGATGGACCGCAAGCGGGGGAGGGGATTCCCCCCGGTCAGA
idx 16 locidx 835
0 C
5 (0, 5, 5, 0)
[20 0 1 0]
55 T
60 (55, 5, 5, 0)
[ 0 0 21 0]
75 T
80 (75, 5, 5, 0)
[ 0 0 21 0]
77 A
82 (77, 5, 5, 0)
[ 0 21 0 0]
CAAAGCCAGGTTTGCCCGGCTACGTGTGAGTAGAGTGCACCGTGGGTGCACGCTCTGCCCACTAAGCATCCCCCTTAATAGCTACA
idx 16 locidx 836
23 G
28 (23, 5, 5, 0)
[ 0 0 0 22]
31 C
36 (31, 5, 5, 0)
[22 0 0 0]
37 A
42 (37, 5, 5, 0)
[ 0 22 0 0]
45 C
50 (45, 5, 5, 0)
[22 0 0 0]
55 T
60 (55, 5, 5, 0)
[ 0 0 22 0]
CGACGAAGAACCGAACCCAAGCAGCTACGCACTCGGTATGTTTTACACTCGACCTTCATAGTACTGTGCTTCGTAAGGGAAACCCA
NOT HERE
idx 16 locidx 838
4 C
9 (4, 5, 5, 0)
[18 0 0 0]
48 A
53 (48, 5, 5, 0)
[ 0 18 0 0]
52 A
57 (52, 5, 5, 0)
[ 0 18 0 0]
53 T
58 (53, 5, 5, 0)
[ 0 0 18 0]
71 G
76 (71, 5, 5, 0)
[ 0 0 0 18]
76 C
81 (76, 5, 5, 0)
[18 0 0 0]
83 C
88 (83, 5, 5, 0)
[18 0 0 0]
GTCACTTTTCACGATACACTATTGTTATTACTGTGAGACACAAAGCTAATTCATCACTTCACGGATACCGCGTCCTCCTATAACGC
idx 16 locidx 839
2 C
7 (2, 5, 5, 0)
[19 0 0 0]
4 T
9 (4, 5, 5, 0)
[ 0 0 19 0]
17 C
22 (17, 5, 5, 0)
[19 0 0 0]
58 A
63 (58, 5, 5, 0)
[ 0 19 0 0]
66 C
71 (66, 5, 5, 0)
[19 0 0 0]
70 A
75 (70, 5, 5, 0)
[ 0 19 0 0]
82 T
87 (82, 5, 5, 0)
[ 0 0 19 0]
GACATCTTCTCTGCGTGCTCGATTAATATTCTCGCCCGCTCGGGCTGCCGCGCACAGCATATGATACTATACAACTCGGGGTTGTT
idx 16 locidx 840
6 G
11 (6, 5, 5, 0)
[ 0 0 0 21]
30 T
35 (30, 5, 5, 0)
[ 0 0 21 0]
72 G
77 (72, 5, 5, 0)
[ 0 0 0 21]
TCTAACGTAGAAACTTCCGTGCTTTAGCCGTTAGCGCCACTTTGGTCCATGATTCTGATCCCTTACTATAGTGAACGCCTGTGGAT
idx 16 locidx 841
23 G
28 (23, 5, 5, 0)
[ 0 0 0 16]
TCACCTAAACCTGTGCCTTCGTAGGTTCATCTGTTCCACGATGGAGGTTGCGTGCCATCCTCGAGTCCTTAATCGGCTCTTGCCGC
idx 16 locidx 842
2 C
7 (2, 5, 5, 0)
[17 0 0 0]
4 G
9 (4, 5, 5, 0)
[ 0 0 0 17]
10 A
15 (10, 5, 5, 0)
[ 0 17 0 0]
19 G
24 (19, 5, 5, 0)
[ 0 0 0 17]
39 A
44 (39, 5, 5, 0)
[ 0 17 0 0]
47 G
52 (47, 5, 5, 0)
[ 0 0 0 17]
48 A
53 (48, 5, 5, 0)
[ 0 17 0 0]
ATCCGTGACTAACGGTTTAGGTCTGGCATCGCATTTGACACTATCTAGAAAATAGAACCAGTCAGGAGAATCTAGCAAAAAGATCC
idx 16 locidx 843
2 Y
7 (2, 5, 5, 0)
[ 8 0 10 0]
80 A
85 (80, 5, 5, 0)
[ 0 18 0 0]
ATYTCCGCCGAATTGACCCCGATTGGCGTCAAGGGAATAGATATGAGGAACTGAGCCAATCCACACCGTGTGTAAGCTAAACTTTT
idx 16 locidx 844
11 C
16 (11, 5, 5, 0)
[22 0 0 0]
25 G
30 (25, 5, 5, 0)
[ 0 0 0 22]
53 G
58 (53, 5, 5, 0)
[ 0 0 0 22]
CATCTCATTACCTCAGGTGTTGACGGCGCCAGGTCACAATCTTGAGGCAAGGGGAGTGGGCATCCCACAACCGAGTGTACTTGGAT
idx 16 locidx 845
3 C
8 (3, 5, 5, 0)
[22 0 0 0]
72 M
77 (72, 5, 5, 0)
[11 11 0 0]
79 C
84 (79, 5, 5, 0)
[22 0 0 0]
GTGCCGTCAGGCTCCGGTGCAGCAGGTGCGTGATTACACTGGAAGCTACACTGAAGTGAAGTGCGGGACGAGMATCGCGCAGCAAA
idx 16 locidx 846
0 T
5 (0, 5, 5, 0)
[ 1 0 20 0]
33 M
38 (33, 5, 5, 0)
[10 11 0 0]
43 T
48 (43, 5, 5, 0)
[ 0 0 21 0]
TTGCCAGAAAGAAGGGCTGACGACTCCATTATAMTCACCCTCTTACCATTACCTGTCGATAGGTGTAAGCTAGAGGGCCTCGGGAG
idx 16 locidx 847
20 C
25 (20, 5, 5, 0)
[18 0 0 0]
23 T
28 (23, 5, 5, 0)
[ 0 0 18 0]
32 C
37 (32, 5, 5, 0)
[18 0 0 0]
61 A
66 (61, 5, 5, 0)
[ 0 18 0 0]
63 C
68 (63, 5, 5, 0)
[18 0 0 0]
68 A
73 (68, 5, 5, 0)
[ 0 18 0 0]
81 A
86 (81, 5, 5, 0)
[ 0 18 0 0]
AGAAATCTACAGAAGCTGTGCCGTGGACCTGCCGAGGTTTCCCAATCTCACTAAAGGGGGGAGCCTTTAGGCCTATAAATTAGGTT
idx 16 locidx 848
14 G
19 (14, 5, 5, 0)
[ 0 0 0 15]
26 T
31 (26, 5, 5, 0)
[ 0 0 15 0]
50 A
55 (50, 5, 5, 0)
[ 0 15 0 0]
67 T
72 (67, 5, 5, 0)
[ 0 0 15 0]
GATACTGCCTAATTGCCCTACTCAGATACCGCATATGTTTTCTCGGTACAACATGTTCGTTTGCTTATGACGCTATGTACTAACAG
idx 16 locidx 849
12 A
17 (12, 5, 5, 0)
[ 0 18 0 0]
13 A
18 (13, 5, 5, 0)
[ 0 18 0 0]
15 A
20 (15, 5, 5, 0)
[ 0 18 0 0]
17 T
22 (17, 5, 5, 0)
[ 0 0 18 0]
19 G
24 (19, 5, 5, 0)
[ 0 0 0 18]
20 A
25 (20, 5, 5, 0)
[ 0 18 0 0]
29 C
34 (29, 5, 5, 0)
[18 0 0 0]
33 G
38 (33, 5, 5, 0)
[ 0 0 0 18]
62 A
67 (62, 5, 5, 0)
[ 0 18 0 0]
66 G
71 (66, 5, 5, 0)
[ 0 0 0 18]
80 G
85 (80, 5, 5, 0)
[ 0 0 0 18]
85 A
90 (85, 5, 5, 0)
[ 0 18 0 0]
TTCCATGATAGTAAAAGTTGACATGGAGCCTTGGAGATGTTACTCACACGGGTTACTATCGGATTGGCGTATTAAGGACTGAGCAA
idx 17 locidx 850
6 T
11 (6, 5, 5, 0)
[ 0 0 17 0]
8 T
13 (8, 5, 5, 0)
[ 0 0 17 0]
11 A
16 (11, 5, 5, 0)
[ 0 17 0 0]
34 T
39 (34, 5, 5, 0)
[ 0 0 17 0]
55 A
60 (55, 5, 5, 0)
[ 0 17 0 0]
65 A
70 (65, 5, 5, 0)
[ 0 17 0 0]
77 C
82 (77, 5, 5, 0)
[17 0 0 0]
TAAAGCTCTCTACATAGTAATTCGAACGCGACGGTCTTCGGCAGCTCGCGGTCCGATCCCCACTTAGGCCGAATCGCCATCCGTTT
idx 17 locidx 851
44 C
49 (44, 5, 5, 0)
[18 0 0 0]
45 T
50 (45, 5, 5, 0)
[ 0 0 18 0]
50 T
55 (50, 5, 5, 0)
[ 0 0 18 0]
CCAGAGACTACCACTCTGATTCAGTTTATGATGTACTCGACCCTCTCTCTTTTTTTAGATGTGGTAAGATTTTATAAAAGTTAACT
idx 17 locidx 852
18 G
23 (18, 5, 5, 0)
[ 0 0 0 25]
20 G
25 (20, 5, 5, 0)
[ 0 0 0 25]
65 T
70 (65, 5, 5, 0)
[ 0 0 25 0]
GGGAGCCGGGGGCACGACGCGGATCTCCGTACAGTAGATCACGATCTCTACGAAATATGAAGAACTTGAGACCTAACCAACCCATT
idx 17 locidx 853
11 C
16 (11, 5, 5, 0)
[22 0 0 0]
58 A
63 (58, 5, 5, 0)
[ 0 22 0 0]
74 G
79 (74, 5, 5, 0)
[ 1 0 0 21]
GTGCTCTAGCACGAGGACATCCGAAGTTTCGATTAGCGTTGATGTCTAAACCTGGAACAACGCAAGTTGGTGTGGCTTCGAACCAG
idx 17 locidx 854
21 C
26 (21, 5, 5, 0)
[17 0 0 0]
ATAGGAGACGAATTAAATCTACATCAATCATTAGGCGTGGGATTGCTTCAAAGTCTGTTCCGGGAGCTGCCAGGCCCCAGTGCTAG
idx 17 locidx 855
18 G
23 (18, 5, 5, 0)
[ 0 1 0 19]
26 G
31 (26, 5, 5, 0)
[ 0 0 0 20]
32 G
37 (32, 5, 5, 0)
[ 0 0 0 20]
64 A
69 (64, 5, 5, 0)
[ 0 20 0 0]
66 G
71 (66, 5, 5, 0)
[ 0 0 0 20]
85 G
90 (85, 5, 5, 0)
[ 0 0 0 20]
GGGAGACGCTGGCCATCGGCCGCGCTGCCGAGGAACTTCTACATTGTCCGCTTCCCAAAAATATAGGCGATTACCCAGTTAGTGGG
idx 17 locidx 856
25 T
30 (25, 5, 5, 0)
[ 0 0 13 0]
27 G
32 (27, 5, 5, 0)
[ 0 0 0 13]
52 G
57 (52, 5, 5, 0)
[ 0 0 0 13]
72 C
77 (72, 5, 5, 0)
[13 0 0 0]
TGGTTCATCACAAATCGATGCCCGGTCGTCGCCCTTGTCGCTAATGGAGCGCGACAATTCTAGCAGGGTTCGCCTTATTCACGCCA
idx 17 locidx 857
72 T
77 (72, 5, 5, 0)
[ 0 0 19 0]
80 A
85 (80, 5, 5, 0)
[ 0 19 0 0]
84 G
89 (84, 5, 5, 0)
[ 0 0 0 19]
ACCCTAGACGGAAATTGTAGTTTCATGACGCAACGCCGTCTCTCACCTCCAAGGCTATGAAGTCGCTTCAAGTGGCAGTGACACGA
idx 17 locidx 858
14 T
19 (14, 5, 5, 0)
[ 0 0 23 0]
31 G
36 (31, 5, 5, 0)
[ 0 0 0 23]
36 G
41 (36, 5, 5, 0)
[ 0 0 0 23]
40 M
45 (40, 5, 5, 0)
[10 13 0 0]
CTGCTACAGATAGGTTTCAGCATTTAAGGAAGTGGTGTGGMGCTCCCACATTTTCTGTGCAACACGAATTGTAAGTCGGCTAGCTC
NOT HERE
idx 17 locidx 860
0 A
5 (0, 5, 5, 0)
[ 0 17 0 0]
1 C
6 (1, 5, 5, 0)
[17 0 0 0]
24 R
29 (24, 5, 5, 0)
[0 9 0 8]
34 A
39 (34, 5, 5, 0)
[ 0 17 0 0]
52 G
57 (52, 5, 5, 0)
[ 0 0 0 17]
85 C
90 (85, 5, 5, 0)
[17 0 0 0]
ACCGCCGGGACAAGCTTTCGTTAARGGTGGCCACATGACCAGGTTAAGGTTGGCTTGTTTAGTTAACCTTTGCAACCGGCGTAAAC
idx 17 locidx 861
16 G
21 (16, 5, 5, 0)
[ 0 0 0 17]
33 G
38 (33, 5, 5, 0)
[ 0 0 0 17]
34 G
39 (34, 5, 5, 0)
[ 0 0 0 17]
39 A
44 (39, 5, 5, 0)
[ 0 17 0 0]
42 C
47 (42, 5, 5, 0)
[17 0 0 0]
49 T
54 (49, 5, 5, 0)
[ 0 0 17 0]
AAGGTGACGTGCCATAGAGAGACGTGCACAGTGGGGAGAAGTCTCACTATGGCAGAGGGATGGAGAAAGCCCGAGGGGTAGGTCTA
idx 17 locidx 862
30 T
35 (30, 5, 5, 0)
[ 0 0 20 0]
40 A
45 (40, 5, 5, 0)
[ 1 19 0 0]
55 A
60 (55, 5, 5, 0)
[ 0 20 0 0]
GCGCAGCCGCGTAGAAACCGACACAACGGATCCTTCAAGCAACGAAGCGACGGCCAGATTCTTAGTTCGCGATAATCTCAGTCAAT
idx 17 locidx 863
20 G
25 (20, 5, 5, 0)
[ 0 0 0 23]
24 T
29 (24, 5, 5, 0)
[ 0 0 23 0]
30 G
35 (30, 5, 5, 0)
[ 0 0 0 23]
76 C
81 (76, 5, 5, 0)
[23 0 0 0]
GATAGGCTTACGCTTGACACGAAATGATGTGGTTATCTCGGAGTCCAGACCGCCTGATAACCTAGGCAATGCATCTCGCATGTAGA
idx 17 locidx 864
1 A
6 (1, 5, 5, 0)
[ 0 25 0 0]
7 T
12 (7, 5, 5, 0)
[ 0 0 25 0]
40 G
45 (40, 5, 5, 0)
[ 0 0 0 25]
82 T
87 (82, 5, 5, 0)
[ 0 0 25 0]
TATCCAATCCCGTTTTTACGCAGCGCGCCAGACCTTTGGTGGTCCTCCGTAGATAGCGGACCGGAAGGAATAAAGGCTACGTTGCA
idx 17 locidx 865
27 G
32 (27, 5, 5, 0)
[ 0 0 0 18]
29 C
34 (29, 5, 5, 0)
[18 0 0 0]
45 W
50 (45, 5, 5, 0)
[0 9 9 0]
53 T
58 (53, 5, 5, 0)
[ 0 0 17 1]
60 Y
65 (60, 5, 5, 0)
[9 0 9 0]
61 T
66 (61, 5, 5, 0)
[ 0 0 18 0]
77 A
82 (77, 5, 5, 0)
[ 0 18 0 0]
85 T
90 (85, 5, 5, 0)
[ 0 0 18 0]
CCGGACACACGGTACGTCGAGGCGCCAGCCAAGTGCTGAGTATCGWTGCGCCGTTATCTAYTATGGGCACCCGTCAAATCGTTGTT
idx 17 locidx 866
18 A
23 (18, 5, 5, 0)
[ 0 21 0 0]
21 G
26 (21, 5, 5, 0)
[ 0 0 0 21]
28 T
33 (28, 5, 5, 0)
[ 0 0 21 0]
29 T
34 (29, 5, 5, 0)
[ 0 0 21 0]
38 G
43 (38, 5, 5, 0)
[ 0 0 0 21]
52 T
57 (52, 5, 5, 0)
[ 0 0 21 0]
59 A
64 (59, 5, 5, 0)
[ 0 21 0 0]
61 G
66 (61, 5, 5, 0)
[ 0 0 0 21]
65 G
70 (65, 5, 5, 0)
[ 0 0 0 21]
TTTGGATAATCGCATGAAAATGTCGGCCTTCCATTTTGGGGCTCATCGATCTTCAAATGACGGAGGCTTCGACCAGACAAGCTGAG
idx 17 locidx 867
35 A
40 (35, 5, 5, 0)
[ 0 18 0 0]
66 G
71 (66, 5, 5, 0)
[ 0 0 0 18]
TGTGTATTAGCATTGGCCACCGCATGTCCTCGCACAGGGTCCCGGAGAAGCGGTCGTGATGTATGCGTACAGACGTACTCCAATTC
idx 17 locidx 868
25 T
30 (25, 5, 5, 0)
[ 0 0 21 0]
37 T
42 (37, 5, 5, 0)
[ 0 0 21 0]
57 C
62 (57, 5, 5, 0)
[21 0 0 0]
71 C
76 (71, 5, 5, 0)
[21 0 0 0]
ATTTGAGAGATCTCTTTACGCGCTCTGCAAATGTTTCTCTGCTAGTTAAAGGAACGCCGTAGTCGATATTCCCGTGCCCACGTTCG
idx 17 locidx 869
58 A
63 (58, 5, 5, 0)
[ 0 22 0 0]
82 G
87 (82, 5, 5, 0)
[ 0 0 0 22]
GATAGGTAATCATTTGCAAGGGGCCGTCGCTGACCCTTATATGAACAATCCAGTCTATAGCGGCCACTGACCGCCGTAACAAGCAT
idx 17 locidx 870
6 G
11 (6, 5, 5, 0)
[ 0 0 0 24]
19 A
24 (19, 5, 5, 0)
[ 0 24 0 0]
24 C
29 (24, 5, 5, 0)
[24 0 0 0]
46 A
51 (46, 5, 5, 0)
[ 0 24 0 0]
70 C
75 (70, 5, 5, 0)
[24 0 0 0]
CGTGGCGTCATTCTAGGTAAAACTCCTGCTGGATACCCGTTAGCCGAGCGCACCTTTTAGGTTACGCACGCTGTCTAACGGACATA
idx 17 locidx 871
27 C
32 (27, 5, 5, 0)
[22 0 0 0]
ATTATGGCCACAGATTCATCAAAGACGCCTTGGCACTTGGATGACCGGGCCCGGCTCGCCGTGTGATGCGGTGCATTGCCCTGCCT
idx 17 locidx 872
11 A
16 (11, 5, 5, 0)
[ 0 20 0 0]
30 T
35 (30, 5, 5, 0)
[ 0 0 20 0]
38 G
43 (38, 5, 5, 0)
[ 0 0 0 20]
54 T
59 (54, 5, 5, 0)
[ 0 0 20 0]
71 G
76 (71, 5, 5, 0)
[ 0 0 0 20]
CTCACCCATTGAAGAGGTTTAGCAACGGCATTGTACGCGCATACGGTGACGTAATTCAGAGTTAATTCCGCGTGCGACTCCTAGCT
idx 17 locidx 873
4 C
9 (4, 5, 5, 0)
[19 0 0 0]
TAGTCATAACGATAACCGGACATAACCTCTAGCGACAATTGAGTTGACACATGTGTCCCCTTAGAGAGTTAACGCATAGCGGCCGC
idx 17 locidx 874
2 G
7 (2, 5, 5, 0)
[ 0 0 0 22]
12 A
17 (12, 5, 5, 0)
[ 0 22 0 0]
16 G
21 (16, 5, 5, 0)
[ 0 0 0 22]
40 A
45 (40, 5, 5, 0)
[ 0 22 0 0]
80 C
85 (80, 5, 5, 0)
[22 0 0 0]
CCGAACCAGACCATAAGTTGATCCTAAGGGTAACACCTTGATTGGAATGTGAGTACCACTTTAGGTTCTAGGACGTGGTGCTGGCG
idx 17 locidx 875
36 C
41 (36, 5, 5, 0)
[20 0 0 0]
83 T
88 (83, 5, 5, 0)
[ 0 0 20 0]
84 A
89 (84, 5, 5, 0)
[ 0 20 0 0]
85 C
90 (85, 5, 5, 0)
[20 0 0 0]
ACTCACGGCTAGGGTTCCCACGTGATAATAGCTCCGCCCCCTAGCCTCAGCAGTTTGACGGACCTTTAACCAGCTGTCCAAAGTAC
idx 17 locidx 876
14 G
19 (14, 5, 5, 0)
[ 0 0 0 20]
37 G
42 (37, 5, 5, 0)
[ 0 0 0 20]
53 T
58 (53, 5, 5, 0)
[ 0 0 20 0]
65 A
70 (65, 5, 5, 0)
[ 0 20 0 0]
CTCTAGCAATCTAAGGAGGCTCGTGTTCTGCCCCGGCGATTGTCTTTTGTCCGTTGTACCCCCCTAAATCGACGTTGAAATAGAAA
NOT HERE
idx 17 locidx 878
73 C
78 (73, 5, 5, 0)
[20 0 0 0]
74 A
79 (74, 5, 5, 0)
[ 0 20 0 0]
85 G
90 (85, 5, 5, 0)
[ 0 0 0 20]
TCATGAGCCCTCGAGTTACTCTGTAGAAAAAAAGCCTAACCGACTTTAGTACCCGATCTCTCGCCATACCTGACATGTCCCTTCTG
idx 17 locidx 879
2 A
7 (2, 5, 5, 0)
[ 0 19 0 0]
30 C
35 (30, 5, 5, 0)
[19 0 0 0]
65 T
70 (65, 5, 5, 0)
[ 0 0 19 0]
GAAGGGGGGACGCCGTAGGGCTAACCAACGCTTTTTAAGCGCCTCAAGATTAATAAACCACATCTTCTGAGTGTTTAAGCCGACGA
idx 17 locidx 880
30 A
35 (30, 5, 5, 0)
[ 0 19 0 0]
CTGCCAGTCAGTCCCGAATAGAGCGAAAGTAAAGAGCGTGATGCTCCCGCATCCGTGCCGGATCCTCTCACGACAATGTGGTCGCC
idx 17 locidx 881
9 C
14 (9, 5, 5, 0)
[19 0 0 0]
36 A
41 (36, 5, 5, 0)
[ 0 19 0 0]
53 C
58 (53, 5, 5, 0)
[19 0 0 0]
76 C
81 (76, 5, 5, 0)
[19 0 0 0]
ATCCGACGCCAGGGACCCCAATTGTCGCAGGAGATGACTCGGTAAATTTCTCTCTTCTACAAGGTGGTGCCTTCAGCATCTAGCCC
idx 17 locidx 882
25 A
30 (25, 5, 5, 0)
[ 0 17 0 0]
26 T
31 (26, 5, 5, 0)
[ 0 0 17 0]
44 G
49 (44, 5, 5, 0)
[ 0 0 0 17]
71 T
76 (71, 5, 5, 0)
[ 0 0 17 0]
ACATGACAAGCGACGTTACTGCCCCATGTTGGTAGGCCAATACGGGCCATTGAACCACGTTGTTTCCGCAATCTCGGCGGCCACAT
idx 17 locidx 883
1 C
6 (1, 5, 5, 0)
[21 0 0 0]
31 A
36 (31, 5, 5, 0)
[ 0 21 0 0]
45 G
50 (45, 5, 5, 0)
[ 0 0 0 21]
46 C
51 (46, 5, 5, 0)
[21 0 0 0]
CCCTGTTGTAAATTGCCCGAATACAACCAACAGGATAGGGACTGAGCTCAACAGCGGCATGAGGTCTGCTACCAAATTCCTTACGA
idx 17 locidx 884
33 C
38 (33, 5, 5, 0)
[20 0 0 0]
83 G
88 (83, 5, 5, 0)
[ 0 0 0 20]
AAACAGTAGCGGCCCATCTTTTTAAACTTTTACCAAGTCTGTGCAGCCGACCGATCTGAAGAGGTTTACACCGATATGAGGATGGG
idx 17 locidx 885
28 Y
33 (28, 5, 5, 0)
[11 0 10 0]
36 C
41 (36, 5, 5, 0)
[21 0 0 0]
42 T
47 (42, 5, 5, 0)
[ 0 0 21 0]
63 A
68 (63, 5, 5, 0)
[ 0 21 0 0]
75 A
80 (75, 5, 5, 0)
[ 0 21 0 0]
TCGCATTCCGTCAAGGCATATGTGCGCAYGCTGGCGCGGTAATTATTCTTACCGTTCCTACCTACTATTACTCAAACTGCCCCTAC
idx 17 locidx 886
39 G
44 (39, 5, 5, 0)
[ 0 0 0 23]
40 A
45 (40, 5, 5, 0)
[ 0 23 0 0]
ACGCTTGATTAGTCTTCTACGCTTGTTAGGTTACTCGCAGAATTCTTTAGTCTTGGATGGTGAATGTATATCGGAAATGGTCGAGG
idx 17 locidx 887
33 C
38 (33, 5, 5, 0)
[23 0 0 0]
52 G
57 (52, 5, 5, 0)
[ 0 0 0 23]
57 A
62 (57, 5, 5, 0)
[ 0 23 0 0]
58 A
63 (58, 5, 5, 0)
[ 0 23 0 0]
61 T
66 (61, 5, 5, 0)
[ 0 0 23 0]
67 A
72 (67, 5, 5, 0)
[ 0 23 0 0]
CCTGCTCTTAGGATAGGTCCACACATGGCCCATCGAATACGCCCGGCTCCATGATGGAAAATTAAGGATATGTTAAATGGAAATTG
idx 17 locidx 888
24 T
29 (24, 5, 5, 0)
[ 0 0 23 0]
26 G
31 (26, 5, 5, 0)
[ 0 0 0 23]
34 T
39 (34, 5, 5, 0)
[ 0 0 23 0]
41 A
46 (41, 5, 5, 0)
[ 0 23 0 0]
47 A
52 (47, 5, 5, 0)
[ 0 23 0 0]
62 T
67 (62, 5, 5, 0)
[ 0 0 23 0]
76 A
81 (76, 5, 5, 0)
[ 0 23 0 0]
82 C
87 (82, 5, 5, 0)
[23 0 0 0]
CGGGGTCCTTAGAGTCGTTCCTAGTTGGCCTCACTCCGGACAAACGGAGGCTCGTTTACTTTTAGTGCAATCTGTCATAACGCTGC
idx 17 locidx 889
4 T
9 (4, 5, 5, 0)
[ 0 0 23 0]
7 G
12 (7, 5, 5, 0)
[ 0 0 0 23]
30 G
35 (30, 5, 5, 0)
[ 0 0 0 23]
32 C
37 (32, 5, 5, 0)
[23 0 0 0]
34 T
39 (34, 5, 5, 0)
[ 0 0 23 0]
50 A
55 (50, 5, 5, 0)
[ 0 23 0 0]
AGCATGCGACGAGAGCCCCGGGAGATATCTGCCCTAAGTCTTCACACCCTAGGGGTACCGCGTCGCATTTGGTGCTATGCGCACAT
idx 17 locidx 890
26 A
31 (26, 5, 5, 0)
[ 0 21 0 0]
28 A
33 (28, 5, 5, 0)
[ 0 21 0 0]
32 G
37 (32, 5, 5, 0)
[ 0 0 0 21]
44 A
49 (44, 5, 5, 0)
[ 0 21 0 0]
53 A
58 (53, 5, 5, 0)
[ 0 21 0 0]
57 T
62 (57, 5, 5, 0)
[ 0 0 21 0]
74 G
79 (74, 5, 5, 0)
[ 0 0 0 21]
81 G
86 (81, 5, 5, 0)
[ 0 0 0 21]
84 C
89 (84, 5, 5, 0)
[21 0 0 0]
85 G
90 (85, 5, 5, 0)
[ 0 0 0 21]
ACCGTTTCTCCGTGAATAGCAGTGTGATAACGGCTACGGATAGAATGTCGTGAACCATCACACTGCGGCCCGTCGAGGTCGGCTCG
idx 17 locidx 891
18 T
23 (18, 5, 5, 0)
[ 0 0 23 0]
25 G
30 (25, 5, 5, 0)
[ 0 0 0 23]
40 A
45 (40, 5, 5, 0)
[ 0 23 0 0]
51 C
56 (51, 5, 5, 0)
[23 0 0 0]
66 T
71 (66, 5, 5, 0)
[ 0 0 23 0]
TACGTTGCTTAATGAGCTTCGGTGGGGCTTACATCAGTTCATGACTAACCCCTTATGATGTGGAACTACGAACCACGATCGACCTT
idx 17 locidx 892
19 G
24 (19, 5, 5, 0)
[ 0 0 0 19]
22 T
27 (22, 5, 5, 0)
[ 0 0 19 0]
69 T
74 (69, 5, 5, 0)
[ 0 0 19 0]
85 C
90 (85, 5, 5, 0)
[19 0 0 0]
ACGCGATAGCCGGTAATAAGGGTCAACGCACTAGACTCATGATCTACGACGATGACATTCTTCTTAGTATCCCTTGGGACGACGCC
idx 17 locidx 893
36 T
41 (36, 5, 5, 0)
[ 0 0 19 0]
TTGGAGCAGCTACGGATAGACAAAGTTATCCCAACGTTACCTGGGATGTGGTACCTGGATTATGAACTCTGAATATGCGCCCGCTG
idx 17 locidx 894
25 Y
30 (25, 5, 5, 0)
[6 0 9 0]
63 T
68 (63, 5, 5, 0)
[ 0 0 15 0]
CGTTACTACTTTAGGCAACTACCATYCGGTATTAACACAGCCGTGCCGTCATCTTAACATAAGTATCATCGTAGTAGCAAGGTCAA
idx 17 locidx 895
10 G
15 (10, 5, 5, 0)
[ 0 0 0 18]
26 C
31 (26, 5, 5, 0)
[17 0 0 1]
41 A
46 (41, 5, 5, 0)
[ 0 17 0 1]
52 G
57 (52, 5, 5, 0)
[ 0 0 0 18]
CTTTTGCGAGGGCCCGGGGCCTCCCGCGATTAATTATGCGAACATTACAAACGGTAGCCTGAAACAGCTTGCATCTCATGGTCGTG
idx 17 locidx 896
11 C
16 (11, 5, 5, 0)
[19 0 0 0]
35 C
40 (35, 5, 5, 0)
[19 0 0 0]
78 T
83 (78, 5, 5, 0)
[ 0 0 19 0]
ATCGATGGCATCCTCTTTAACTAGGTAGTGCGAATCCCTCAAATTGGCAATCCGGTTCAGTTTTATGTCGTGAACTCTTAATAAGG
idx 17 locidx 897
0 T
5 (0, 5, 5, 0)
[ 0 0 20 0]
47 A
52 (47, 5, 5, 0)
[ 0 20 0 0]
TCTCAGTCGGTCCAGGATCTCATTTAGTTCACTCTTCTTTGGTCGTAAACTGATCATCAGGGCTTTGCCATAGATTTCCACATCGC
idx 17 locidx 898
30 T
35 (30, 5, 5, 0)
[ 0 0 12 0]
34 T
39 (34, 5, 5, 0)
[ 0 0 12 0]
55 T
60 (55, 5, 5, 0)
[ 0 0 12 0]
TTTTAGCGGGAGGAACTTGTATCTTTTTGGTCGCTTTACTTCGCACCGAGCGGTATATGAGTTATACCAGTCCTGCTATGAGCTGT
idx 17 locidx 899
6 T
11 (6, 5, 5, 0)
[ 0 0 23 0]
46 T
51 (46, 5, 5, 0)
[ 0 0 23 0]
56 G
61 (56, 5, 5, 0)
[ 0 0 0 23]
TTTGTCTACACGCACACGCACGATCGGCTCACGTGGCACCGCATGCTAGTTACTTGGACCGAGTGATACTGGGCCATCCTCCCGTT
idx 18 locidx 900
25 T
30 (25, 5, 5, 0)
[ 0 0 16 0]
28 T
33 (28, 5, 5, 0)
[ 0 0 16 0]
44 A
49 (44, 5, 5, 0)
[ 0 16 0 0]
54 C
59 (54, 5, 5, 0)
[16 0 0 0]
69 C
74 (69, 5, 5, 0)
[16 0 0 0]
AGGAGGATTTACACCCGTTTACGCCTAGTGTGTCTATTTGCTATATGGACAGGCCGCTCTGAGCTAAGCCTCGTTAAGGTCCGGTA
idx 18 locidx 901
9 G
14 (9, 5, 5, 0)
[ 0 0 0 20]
17 A
22 (17, 5, 5, 0)
[ 0 20 0 0]
32 G
37 (32, 5, 5, 0)
[ 0 0 0 20]
41 T
46 (41, 5, 5, 0)
[ 0 0 20 0]
81 G
86 (81, 5, 5, 0)
[ 0 0 0 20]
86 A
90 (86, 5, 5, 1)
[ 0 20 0 0]
AAGAGAAAGGCTTCCCTACACGTACAAGATCGGAAGCCTCTTGAGAGTTAGCTGCCCCAAGTTAGTGGCCGGCTCAGTTAGGGC-CA
idx 18 locidx 902
26 T
31 (26, 5, 5, 0)
[ 0 0 20 0]
46 A
51 (46, 5, 5, 0)
[ 0 20 0 0]
51 C
56 (51, 5, 5, 0)
[20 0 0 0]
62 G
67 (62, 5, 5, 0)
[ 0 0 0 20]
GCCATACTGCCTCTTAATGTTATCCGTTCGCTGTATTGTGGGAGTTACATCCCGGTCGTGTAGACCCTGCGGCTAAAAACAACCAG
idx 18 locidx 903
3 T
8 (3, 5, 5, 0)
[ 0 0 23 0]
45 T
50 (45, 5, 5, 0)
[ 0 0 23 0]
63 T
68 (63, 5, 5, 0)
[ 0 0 23 0]
69 G
74 (69, 5, 5, 0)
[ 0 0 0 23]
71 A
76 (71, 5, 5, 0)
[ 0 23 0 0]
80 A
85 (80, 5, 5, 0)
[ 0 23 0 0]
83 C
88 (83, 5, 5, 0)
[23 0 0 0]
ATTTAGGGAAGTATGAATAAATAAGTACAAGGACGATGCTCCCACTCTGTCATACTTGTGTTCTCGTCTGGAGACGTCCAACCCAC
idx 18 locidx 904
3 A
8 (3, 5, 5, 0)
[ 0 23 0 0]
9 C
14 (9, 5, 5, 0)
[23 0 0 0]
10 T
15 (10, 5, 5, 0)
[ 0 0 23 0]
20 A
25 (20, 5, 5, 0)
[ 0 23 0 0]
50 C
55 (50, 5, 5, 0)
[23 0 0 0]
54 A
59 (54, 5, 5, 0)
[ 0 23 0 0]
85 A
90 (85, 5, 5, 0)
[ 0 23 0 0]
GGCAACAACCTACGTGGGCTATATCCAGCATCTAAAACGTCCGGCGGAGTCTCAATTGTGGCGGAGCTACCTTCTGGCGTGGCCGA
idx 18 locidx 905
13 A
18 (13, 5, 5, 0)
[ 0 23 0 0]
41 A
46 (41, 5, 5, 0)
[ 0 23 0 0]
49 C
54 (49, 5, 5, 0)
[23 0 0 0]
61 G
66 (61, 5, 5, 0)
[ 0 0 0 23]
73 C
78 (73, 5, 5, 0)
[23 0 0 0]
83 C
88 (83, 5, 5, 0)
[23 0 0 0]
84 T
89 (84, 5, 5, 0)
[ 0 0 22 1]
85 T
90 (85, 5, 5, 0)
[ 0 0 23 0]
ACCTCAAGTTCTTACCTGATAACTAGGCTGTACCCTACCGGACCGAATCCAGTATTTTAGAGTGACATGTCCTCCTCTCACTCCTT
idx 18 locidx 906
14 C
19 (14, 5, 5, 0)
[16 0 0 0]
20 C
25 (20, 5, 5, 0)
[16 0 0 0]
29 T
34 (29, 5, 5, 0)
[ 0 0 16 0]
71 G
76 (71, 5, 5, 0)
[ 0 0 0 16]
78 G
83 (78, 5, 5, 0)
[ 0 0 0 16]
GAAAATCGGTTGAACGACCTCTGCTCAAATGCGCTATGCAGGTTTCCGTACCACGTTTTGTACCGAGACCAGGAACTGGATTTATC
idx 18 locidx 907
26 C
31 (26, 5, 5, 0)
[17 1 0 0]
GTCTACTAGTCGATGACTAATATACTCACGACCTACTACTCCTAGGCGGGAAAAGGCTCCTCGGGGTCCTCAAAGCAGGATAATGC
idx 18 locidx 908
33 T
38 (33, 5, 5, 0)
[ 0 0 17 0]
34 C
39 (34, 5, 5, 0)
[17 0 0 0]
48 A
53 (48, 5, 5, 0)
[ 0 17 0 0]
58 G
63 (58, 5, 5, 0)
[ 0 0 0 17]
64 T
69 (64, 5, 5, 0)
[ 0 0 17 0]
78 A
83 (78, 5, 5, 0)
[ 0 17 0 0]
83 G
88 (83, 5, 5, 0)
[ 0 0 0 17]
84 A
89 (84, 5, 5, 0)
[ 0 17 0 0]
ATCTTTGTCGTATCAGATCCTTCATTTTTCTACTCAACCGGTCGGGAAATCGAGAGACGTTGCATAGTAGTAGCGTACAAAGAGAC
NOT HERE
idx 18 locidx 910
3 G
8 (3, 5, 5, 0)
[ 0 0 0 16]
30 T
35 (30, 5, 5, 0)
[ 0 0 16 0]
47 C
52 (47, 5, 5, 0)
[16 0 0 0]
52 G
57 (52, 5, 5, 0)
[ 0 0 0 16]
TCTGCAGCCTGAACTATTGTTTTCTGTTTGTAGACGCACCGTCCTACCGAATGAAGGCTGTACAATCCCGTTGAGCGACTGGATAA
idx 18 locidx 911
20 C
25 (20, 5, 5, 0)
[19 0 0 0]
25 G
30 (25, 5, 5, 0)
[ 0 0 0 19]
59 T
64 (59, 5, 5, 0)
[ 0 0 19 0]
67 G
72 (67, 5, 5, 0)
[ 0 0 0 19]
GTCACATAAGGCCGACTTGTCATGAGTTAAGGCTCAGGACAATAGGACGAAAGTCAGTCTACATGCGGGATAGAAACTGTCGCCTA
idx 18 locidx 912
24 C
29 (24, 5, 5, 0)
[20 0 0 0]
51 S
56 (51, 5, 5, 0)
[ 7 0 0 13]
66 A
71 (66, 5, 5, 0)
[ 0 19 1 0]
77 C
82 (77, 5, 5, 0)
[20 0 0 0]
TGGTTGTGAATTTTGTGGCGTATTCAAACACACGTACTGGATTTTCGGTTASAGGCGTGAGTGCCGATCCCCCGGGGCTAGATGAG
idx 18 locidx 913
48 C
53 (48, 5, 5, 0)
[21 0 0 0]
66 G
71 (66, 5, 5, 0)
[ 0 0 0 21]
69 C
74 (69, 5, 5, 0)
[21 0 0 0]
78 C
83 (78, 5, 5, 0)
[21 0 0 0]
82 A
87 (82, 5, 5, 0)
[ 0 21 0 0]
CTCCTCTATGCGCGCTCATGACGGACTCGTCCGCCATATGTAAGGGCACCATTCAAACCCACTGTAGGTCTAGCATGTCGTGATAC
idx 18 locidx 914
22 A
27 (22, 5, 5, 0)
[ 0 14 0 0]
37 C
42 (37, 5, 5, 0)
[14 0 0 0]
39 A
44 (39, 5, 5, 0)
[ 0 14 0 0]
CAGCCACACTATCGATCGTTACATATACGTTGCAACACGATAGCAACCTTTGTGTAGGATTTGCCGCCTTAGATCTACTGCCAGTG
idx 18 locidx 915
7 T
12 (7, 5, 5, 0)
[ 0 0 19 0]
24 T
29 (24, 5, 5, 0)
[ 0 0 19 0]
36 G
41 (36, 5, 5, 0)
[ 0 0 0 19]
65 T
70 (65, 5, 5, 0)
[ 0 0 19 0]
GTAGGGCTGGTCTGTATTTCGACGTGGGAATCGTTAGCGCAACCTTGAAGGCCTTTCGCATTTCCTACGCTAAGGCATCACTTGGG
idx 18 locidx 916
6 T
11 (6, 5, 5, 0)
[ 0 0 19 0]
8 G
13 (8, 5, 5, 0)
[ 0 0 0 19]
16 C
21 (16, 5, 5, 0)
[19 0 0 0]
CCGCAATCGGTAGTGCCCGTAAATGCTGCAGGCTCTGAAACGACCGCAGCCAATATCGGCCGCGCAGCTTTAGCAACCGCATGGGA
idx 18 locidx 917
30 A
35 (30, 5, 5, 0)
[ 0 18 0 0]
43 C
48 (43, 5, 5, 0)
[18 0 0 0]
54 T
59 (54, 5, 5, 0)
[ 0 0 18 0]
61 T
66 (61, 5, 5, 0)
[ 0 0 18 0]
CTATGCAGGCTATGTATTCGGTTTCATTATATTTCCAGAAAATCTGTTTTAGCATACGCCGTCACTCCTATATTAACGGCTTAAAC
idx 18 locidx 918
0 T
5 (0, 5, 5, 0)
[ 0 0 12 0]
50 C
55 (50, 5, 5, 0)
[12 0 0 0]
80 W
85 (80, 5, 5, 0)
[0 6 6 0]
TACCCACTAGACGTCTTAGCTGGTTCAGTGGCCAGCCCTCCTCCGTGGTGCTGGATATATGTAAAATTTTTGAATGCCTTWGACGT
idx 18 locidx 919
2 G
7 (2, 5, 5, 0)
[ 0 0 0 26]
56 G
61 (56, 5, 5, 0)
[ 0 0 0 26]
61 C
66 (61, 5, 5, 0)
[26 0 0 0]
77 G
82 (77, 5, 5, 0)
[ 0 0 0 26]
CAGACACGAAATAATGGCAGAATCCTTACTTGCAAACAAATGGGATTCTCGTCGTCGGTGTCGATCGGCATTCTTCTGAGTGAGAT
idx 18 locidx 920
15 C
20 (15, 5, 5, 0)
[18 0 0 0]
40 C
45 (40, 5, 5, 0)
[18 0 0 0]
67 C
72 (67, 5, 5, 0)
[18 0 0 0]
CTCATCTCCTGATATCGTCACGTTTTCCTAAGGGAGTGGCCCATAGGACCCCCATGCGCAACGTCTTCGACTTAAGGTTACGGGCA
idx 18 locidx 921
19 C
24 (19, 5, 5, 0)
[24 0 0 0]
42 T
47 (42, 5, 5, 0)
[ 0 0 24 0]
62 A
67 (62, 5, 5, 0)
[ 0 24 0 0]
74 A
79 (74, 5, 5, 0)
[ 0 24 0 0]
81 W
86 (81, 5, 5, 0)
[ 0 15 9 0]
TCCCAAGCCACTTTTTTGGCCGACGGGCGTCCTAGGGCGTCATCGTCACTCTGACGGAAGCAAGTACATAACCAAGCTAGTWTATT
idx 18 locidx 922
10 R
15 (10, 5, 5, 0)
[ 0 8 0 14]
13 C
18 (13, 5, 5, 0)
[22 0 0 0]
33 C
38 (33, 5, 5, 0)
[22 0 0 0]
67 A
72 (67, 5, 5, 0)
[ 0 22 0 0]
78 A
83 (78, 5, 5, 0)
[ 0 22 0 0]
GATGCCGAGARGTCATAACGGCACGAATGTCACCAGTTATTTTCCTAATCTAAGACAACAAATAACAAGGAAGTCATTATAGATGT
idx 18 locidx 923
7 T
12 (7, 5, 5, 0)
[ 0 0 24 0]
GCCTCGATAGCCTTCGTCCCTGCTGATTGTTAACTATGGCACGACAGGCCCTCACTGAAAAAGCATTCAAATTAAGAAACGGATTA
idx 18 locidx 924
16 T
21 (16, 5, 5, 0)
[ 0 0 21 0]
33 A
38 (33, 5, 5, 0)
[ 0 21 0 0]
46 G
51 (46, 5, 5, 0)
[ 0 0 0 21]
56 A
61 (56, 5, 5, 0)
[ 0 21 0 0]
CTCTTGCTAAGACCTCTCGGCACGCGTGACTATATCAAACTGACGTGGGGGTATTTACCGAGGTTCGAAAAGTTCATATCACTAAT
idx 18 locidx 925
16 A
21 (16, 5, 5, 0)
[ 0 18 0 0]
39 T
44 (39, 5, 5, 0)
[ 0 0 18 0]
48 A
53 (48, 5, 5, 0)
[ 0 18 0 0]
85 Y
90 (85, 5, 5, 0)
[ 8 0 10 0]
TATCTCGACTTTACCGATCGCCGCATATGACAGCCGACATGTCTGCCTAGCCGCTTGACGGCCAATATAGAGTCGTTGGTTACATY
idx 18 locidx 926
10 A
15 (10, 5, 5, 0)
[ 0 21 0 0]
20 T
25 (20, 5, 5, 0)
[ 0 0 21 0]
23 T
28 (23, 5, 5, 0)
[ 0 0 21 0]
24 T
29 (24, 5, 5, 0)
[ 0 0 21 0]
34 G
39 (34, 5, 5, 0)
[ 0 0 0 21]
64 G
69 (64, 5, 5, 0)
[ 0 0 0 21]
66 Y
71 (66, 5, 5, 0)
[11 0 10 0]
67 K
72 (67, 5, 5, 0)
[ 0 0 11 10]
84 T
89 (84, 5, 5, 0)
[ 0 0 21 0]
CCACTGTATGAAGCACCTCCTGGTTCGGCCGCGAGGCCATTTCCTTCTGAGCCTGTACTGCCGTGGYKAGATTTACGACTAGTATC
idx 18 locidx 927
34 T
39 (34, 5, 5, 0)
[ 0 0 23 0]
55 T
60 (55, 5, 5, 0)
[ 0 0 23 0]
56 A
61 (56, 5, 5, 0)
[ 0 23 0 0]
84 G
89 (84, 5, 5, 0)
[ 0 0 0 23]
AGCGCATCAAATATTCTAGGATCTTTCAACGGAGTAACCCAAATGTGTCCGGCATTAGATCTGTCCGAGGAGAGCTGACGACAAGC
idx 18 locidx 928
57 G
62 (57, 5, 5, 0)
[ 0 0 0 27]
70 T
75 (70, 5, 5, 0)
[ 0 0 27 0]
84 K
89 (84, 5, 5, 0)
[ 0 0 15 12]
TGCGGTGGGCAGTGGAGCTCGACTAGGAATGCGAATTACTGCAAGGATGTAGAAATCGAGAGGGAGCCTCTCCAGGCAGGCGGGKG
idx 18 locidx 929
3 T
8 (3, 5, 5, 0)
[ 0 0 16 0]
18 K
23 (18, 5, 5, 0)
[0 0 8 8]
40 A
45 (40, 5, 5, 0)
[ 0 16 0 0]
42 G
47 (42, 5, 5, 0)
[ 0 0 0 16]
45 m
50 (45, 5, 5, 0)
[8 8 0 0]
61 G
66 (61, 5, 5, 0)
[ 0 0 0 16]
GTATCTATCATCTAAGGAKTTAGATGGTATTGACGGAGAAAAGGTmTAAGACATCATCTGAGCCTCTCAAACATTGAGTCCTCTTT
idx 18 locidx 930
51 C
56 (51, 5, 5, 0)
[18 0 0 0]
53 T
58 (53, 5, 5, 0)
[ 0 0 18 0]
TTCGCTCGTTCTAGTTACGCCAACGATACTGCTACTTGCCTTAGTGTGGAGCATAGTCTCTGATGAGAGGACTGTTCGTCTATTAC
idx 18 locidx 931
0 C
5 (0, 5, 5, 0)
[20 0 0 0]
2 G
7 (2, 5, 5, 0)
[ 0 0 0 20]
21 C
26 (21, 5, 5, 0)
[20 0 0 0]
23 T
28 (23, 5, 5, 0)
[ 0 0 20 0]
29 A
34 (29, 5, 5, 0)
[ 0 20 0 0]
37 G
42 (37, 5, 5, 0)
[ 0 0 0 20]
44 T
48 (44, 5, 5, 1)
[ 0 0 20 0]
47 T
51 (47, 5, 5, 1)
[ 0 0 20 0]
84 A
87 (84, 5, 5, 2)
[ 0 20 0 0]
85 T
88 (85, 5, 5, 2)
[ 0 0 20 0]
CAGTGAGTTATGATGGAACCGCGTGAAGTACCATTCGGAAGCC-TGATCCAAGAATTTGCCTCGGTT-CTTGGTAGAAGGTGGGAT
idx 18 locidx 932
2 T
7 (2, 5, 5, 0)
[ 0 0 23 0]
19 G
24 (19, 5, 5, 0)
[ 0 0 0 23]
44 G
49 (44, 5, 5, 0)
[ 0 0 0 23]
62 A
67 (62, 5, 5, 0)
[ 0 23 0 0]
82 C
87 (82, 5, 5, 0)
[23 0 0 0]
GGTACGTCTCAAGGTGGCTGCGGGTTAAGGAAATGTCGTGCGGAGCAAGCCATCACGGTTCGACGTTACACGCCCAAAACTACGTT
idx 18 locidx 933
23 A
28 (23, 5, 5, 0)
[ 0 20 0 0]
34 C
39 (34, 5, 5, 0)
[20 0 0 0]
43 A
48 (43, 5, 5, 0)
[ 0 20 0 0]
CAGTGTAACGATACTTCTTGGGGAGTTGGGCTGTCCTAAAGAGACCGCCCACGTCTTCTTTAATAAGATTGGTGCACCGTACCACT
idx 18 locidx 934
33 C
38 (33, 5, 5, 0)
[20 0 0 0]
47 C
52 (47, 5, 5, 0)
[20 0 0 0]
65 C
70 (65, 5, 5, 0)
[20 0 0 0]
GAGGTTTAAGTGACTTTGTAGTAGAAAATCAAACGTCGGGGGCTCCTCAGTTACTCGCCCCACAACAGAGCATGCGGTATCCCTTC
idx 18 locidx 935
17 T
22 (17, 5, 5, 0)
[ 0 0 20 0]
33 C
38 (33, 5, 5, 0)
[20 0 0 0]
39 A
44 (39, 5, 5, 0)
[ 0 20 0 0]
46 A
51 (46, 5, 5, 0)
[ 0 20 0 0]
48 G
53 (48, 5, 5, 0)
[ 0 0 0 20]
79 A
84 (79, 5, 5, 0)
[ 0 20 0 0]
TGGGGTGAGACCCAGATTAAAAACCCCTCAATACATGCCAACGTCAAGGGACTCCTTCGTCCACATTCGAGGGTCTGACAGGGTCC
idx 18 locidx 936
1 G
6 (1, 5, 5, 0)
[ 0 0 0 18]
9 A
14 (9, 5, 5, 0)
[ 1 17 0 0]
15 T
20 (15, 5, 5, 0)
[ 0 0 18 0]
29 G
34 (29, 5, 5, 0)
[ 0 0 0 18]
62 T
67 (62, 5, 5, 0)
[ 0 0 18 0]
81 A
86 (81, 5, 5, 0)
[ 0 18 0 0]
85 C
90 (85, 5, 5, 0)
[18 0 0 0]
TGCCGACAAATGGTATAGAGGACGCCTTCGTCACTACTTTCACTAAGGTGCCTAGAGAGGTATTCCTGTCTGTGATTAGCCAGGAC
idx 18 locidx 937
33 T
38 (33, 5, 5, 0)
[ 0 0 25 0]
46 W
51 (46, 5, 5, 0)
[ 0 12 13 0]
AACATTTTCTTTAAGTTCGGCAGCGTTTATTCCTCCGTATGTTTATWGCGTGGCGATCACTCGTATCGATCAGGCGGCCAAATACG
idx 18 locidx 938
0 A
5 (0, 5, 5, 0)
[ 0 24 0 0]
15 A
20 (15, 5, 5, 0)
[ 0 24 0 0]
40 C
45 (40, 5, 5, 0)
[24 0 0 0]
62 C
67 (62, 5, 5, 0)
[24 0 0 0]
ATATCGCTACATGCCACTCACAGACTGCTCCTCGGTGACGCGCAAATAGCGACACGACACCGCTTACCGTTCCCCATAAATCTATC
idx 18 locidx 939
7 C
12 (7, 5, 5, 0)
[21 0 0 0]
9 A
14 (9, 5, 5, 0)
[ 0 21 0 0]
10 A
15 (10, 5, 5, 0)
[ 0 21 0 0]
35 T
40 (35, 5, 5, 0)
[ 0 0 21 0]
46 T
51 (46, 5, 5, 0)
[ 0 0 21 0]
55 C
60 (55, 5, 5, 0)
[21 0 0 0]
62 T
67 (62, 5, 5, 0)
[ 0 0 21 0]
70 C
75 (70, 5, 5, 0)
[21 0 0 0]
GCGCAGTCCAACGTTTTTTTGTTCGCTCAGCGATGTCCCTACATTCTGTTCTCTGCAAATTATCACTTTGCAAGCCTTGAGCGGCA
idx 18 locidx 940
5 C
10 (5, 5, 5, 0)
[19 0 0 0]
10 T
15 (10, 5, 5, 0)
[ 0 0 19 0]
36 G
41 (36, 5, 5, 0)
[ 0 0 0 19]
55 G
60 (55, 5, 5, 0)
[ 0 0 0 19]
GGACACGACATATTGCAACGAAACCGCCCTCGCGTAGCTGACAACAGTCGAAGCGGTTAAAACTTGTATTACTCACAGCTTGATAT
idx 18 locidx 941
43 C
48 (43, 5, 5, 0)
[16 0 0 0]
83 G
88 (83, 5, 5, 0)
[ 0 0 0 16]
TGAGATATGCTAGGAAATTAAACGCTTGTGCACGTCAAAAGCACTTGGTTGAGCGTAGACGTTTAATGTTGGAGGGGCGGTGCGGG
idx 18 locidx 942
29 T
34 (29, 5, 5, 0)
[ 0 0 21 0]
49 G
54 (49, 5, 5, 0)
[ 0 0 0 21]
57 K
62 (57, 5, 5, 0)
[ 0 0 13 8]
69 T
74 (69, 5, 5, 0)
[ 0 0 21 0]
CCAACACGTTAAACGCGTGACTGTAAACTTGTTGCTGGCTAACGAACAAGGACGGAGKGTTCACCATCCTCGTTCAGAATTCGTCG
idx 18 locidx 943
6 T
11 (6, 5, 5, 0)
[ 0 0 19 0]
18 A
23 (18, 5, 5, 0)
[ 0 19 0 0]
AGACGATCCTTGAAGTCTAGGTGCTCGCTAGACAGTTCGGCGACTCAGGCTTGATGGCTCTTCATAGGAGGCCCAATCATAGTTGG
idx 18 locidx 944
26 A
31 (26, 5, 5, 0)
[ 0 23 0 0]
43 G
48 (43, 5, 5, 0)
[ 0 0 0 23]
45 G
50 (45, 5, 5, 0)
[ 0 0 0 23]
65 T
70 (65, 5, 5, 0)
[ 0 0 23 0]
67 A
72 (67, 5, 5, 0)
[ 0 23 0 0]
72 G
77 (72, 5, 5, 0)
[ 0 0 0 23]
73 C
78 (73, 5, 5, 0)
[23 0 0 0]
ATAAGAGTATCAAATGACTATTCACCATCTTGGGTATGTACTTGCGATTTTAGACGTCGCTGATGTTAACCCGCCATGCCAAATAA
idx 18 locidx 945
12 T
17 (12, 5, 5, 0)
[ 0 0 27 0]
66 C
71 (66, 5, 5, 0)
[27 0 0 0]
ACCTTATGTGACTTCACACCATTGATGTACAACTAGGGGCACCCCCTTGGGTTCAATGGTGGATCTCTAAGCGCACCAGTCCGTCC
idx 18 locidx 946
1 A
6 (1, 5, 5, 0)
[ 0 20 0 0]
2 S
7 (2, 5, 5, 0)
[10 0 0 10]
61 C
66 (61, 5, 5, 0)
[19 0 0 1]
GASTTAAACCATTCCGCGACACTGTTGTCGCCTTCAAGCACCGTGCAGCAACCGCGCCGGCCGGCGCACATACGAGTGCTGTCCCA
idx 18 locidx 947
25 T
30 (25, 5, 5, 0)
[ 0 0 23 0]
26 G
31 (26, 5, 5, 0)
[ 0 0 0 23]
43 C
48 (43, 5, 5, 0)
[23 0 0 0]
47 G
52 (47, 5, 5, 0)
[ 0 0 0 23]
71 A
76 (71, 5, 5, 0)
[ 0 23 0 0]
78 C
83 (78, 5, 5, 0)
[23 0 0 0]
83 T
88 (83, 5, 5, 0)
[ 0 0 23 0]
TCCGACTGGCGGCTAGGTACTGTCATGACACTGAACGAACATGCGCCGTTATGTGCTAATTGCATAGCCCCAGGCGGGCCATCTGC
idx 18 locidx 948
12 G
17 (12, 5, 5, 0)
[ 0 0 0 14]
23 C
28 (23, 5, 5, 0)
[14 0 0 0]
44 G
49 (44, 5, 5, 0)
[ 0 0 0 14]
73 G
78 (73, 5, 5, 0)
[ 0 0 0 14]
TACCATAAGCTAGCGACGGGTCACGTTTGGAAATGGACCATTTTGATAAACATCGCACGTTTCCGTGCCGAGAGGCGTTCCCAGAT
idx 18 locidx 949
36 A
41 (36, 5, 5, 0)
[ 0 23 0 0]
49 C
54 (49, 5, 5, 0)
[23 0 0 0]
GTGGGGCGATAGATGACGGCAAGTTGCTGGAGGTGCATACCCCGATTCTCATCCTCCATCGTGAATTCCCATCGATCATGCCACGT
idx 19 locidx 950
20 T
25 (20, 5, 5, 0)
[ 0 0 20 0]
30 G
35 (30, 5, 5, 0)
[ 0 0 0 20]
68 G
73 (68, 5, 5, 0)
[ 0 0 0 20]
71 A
76 (71, 5, 5, 0)
[ 0 20 0 0]
TGGGGTATGTGGTCAATCCATAGACATTATGCGTTCTTCGCACCAGTATTCCACACATTTTATCTAACGAGATGTGTGCCCAAACG
idx 19 locidx 951
7 T
12 (7, 5, 5, 0)
[ 0 0 23 0]
15 C
20 (15, 5, 5, 0)
[22 1 0 0]
31 G
36 (31, 5, 5, 0)
[ 0 0 0 23]
TTGGGATTACGGATCCACTCACGCATGGTCAGTAGTGTTAGTCCGGGCCCCTTTTGCAGTGCATCCGTTCACCGGAGGAAGGACGT
idx 19 locidx 952
29 A
34 (29, 5, 5, 0)
[ 0 18 0 0]
45 G
50 (45, 5, 5, 0)
[ 0 0 0 18]
48 G
53 (48, 5, 5, 0)
[ 0 0 0 18]
63 A
68 (63, 5, 5, 0)
[ 0 18 0 0]
64 G
69 (64, 5, 5, 0)
[ 0 0 0 18]
77 M
82 (77, 5, 5, 0)
[10 8 0 0]
GTCGGGGATCGTCTCTGTATTGGACGATCAATCAGCATGCGTTTGGAGGACTAAGCGAGTAATAGGTACAATCCTACMTTCGGTCA
idx 19 locidx 953
2 A
7 (2, 5, 5, 0)
[ 0 20 0 0]
8 A
13 (8, 5, 5, 0)
[ 0 20 0 0]
22 A
27 (22, 5, 5, 0)
[ 0 20 0 0]
70 C
75 (70, 5, 5, 0)
[20 0 0 0]
GGAGGGACAGTTTGCAGTAGCGATCAATAGTTATTTACAATGTAAGGTCGGGTGACGCCGATTTGAAATACATCATCTACGGCCTC
idx 19 locidx 954
3 A
8 (3, 5, 5, 0)
[ 0 23 0 0]
10 G
15 (10, 5, 5, 0)
[ 0 0 0 23]
32 A
37 (32, 5, 5, 0)
[ 0 23 0 0]
66 R
71 (66, 5, 5, 0)
[ 0 11 0 12]
69 Y
74 (69, 5, 5, 0)
[11 0 12 0]
70 y
75 (70, 5, 5, 0)
[12 0 11 0]
81 C
86 (81, 5, 5, 0)
[23 0 0 0]
CCCACCAAGAGCTTAATGTGGAGAAAAATGCTAACGTGTGCAATTCCTAGATTAACTACAGTCCGARACYyCTCCTTTCGGCTCTT
idx 19 locidx 955
1 A
6 (1, 5, 5, 0)
[ 0 16 0 0]
50 T
55 (50, 5, 5, 0)
[ 0 0 16 0]
TAAGAGCGAGCTCAAAGGGACGCAATCGGTTAGTGCCGGGCGCTTATCGGTTACAATTCGAGACTATCCCATCTTCGAGATGCCCC
idx 19 locidx 956
35 G
40 (35, 5, 5, 0)
[ 0 0 0 21]
51 C
56 (51, 5, 5, 0)
[21 0 0 0]
56 C
61 (56, 5, 5, 0)
[21 0 0 0]
57 C
62 (57, 5, 5, 0)
[21 0 0 0]
80 A
85 (80, 5, 5, 0)
[ 0 21 0 0]
TCCGACCATGACGTCCATGCGCTTACTTCTAAGGGGGTGCTATCCGCTTATCGCAACCAGTGCATTTGGGATGGTCTTTGACAAGG
idx 19 locidx 957
23 A
28 (23, 5, 5, 0)
[ 0 16 0 0]
31 S
36 (31, 5, 5, 0)
[9 0 0 7]
38 A
43 (38, 5, 5, 0)
[ 0 16 0 0]
45 C
50 (45, 5, 5, 0)
[16 0 0 0]
51 T
56 (51, 5, 5, 0)
[ 0 0 16 0]
52 k
57 (52, 5, 5, 0)
[0 0 7 9]
54 T
59 (54, 5, 5, 0)
[ 0 0 16 0]
69 T
74 (69, 5, 5, 0)
[ 0 0 16 0]
CCTGGTTTGTTATTGAATCGACCATGTTTTTSGCCCCTACTCGGCCATCGGTkTTCAGTAAGGCCAGGCTAGCGTCAAACATTATG
idx 19 locidx 958
12 A
17 (12, 5, 5, 0)
[ 0 16 0 0]
37 G
42 (37, 5, 5, 0)
[ 0 0 0 16]
TCCGCGCGGTGGACGGAGCTATAACACACCGCCCTTAGGTGACTCCCTACACTACTTGATAATTATAAGCCGAACCCATCCGCATA
idx 19 locidx 959
7 G
12 (7, 5, 5, 0)
[ 0 0 0 20]
60 T
65 (60, 5, 5, 0)
[ 0 0 20 0]
64 R
69 (64, 5, 5, 0)
[ 0 9 0 11]
76 A
81 (76, 5, 5, 0)
[ 0 20 0 0]
CATCGTTGTCAAATAGTATGGTGATGCTAGAATACCGCTGGCAGAAAATAGCCCGGAATATCCCRAGTCCCCATTCAGACTATCAA
idx 19 locidx 960
10 T
15 (10, 5, 5, 0)
[ 0 0 21 0]
31 G
36 (31, 5, 5, 0)
[ 0 0 0 21]
39 T
44 (39, 5, 5, 0)
[ 0 0 21 0]
69 A
74 (69, 5, 5, 0)
[ 0 21 0 0]
TGTTCCAGGATTAGGCGGCATGGATGTCATTGTTAAAACTTTCTCAGTCTTCATCACGAGTGCCAAGAGATCTTCATGGGACAAAT
idx 19 locidx 961
2 C
7 (2, 5, 5, 0)
[19 0 0 0]
35 A
40 (35, 5, 5, 0)
[ 0 19 0 0]
36 T
41 (36, 5, 5, 0)
[ 0 0 19 0]
39 T
44 (39, 5, 5, 0)
[ 0 0 19 0]
66 C
71 (66, 5, 5, 0)
[19 0 0 0]
78 C
83 (78, 5, 5, 0)
[19 0 0 0]
GGCAGCGGCTTATAACCCCAAGGGAATACGGAAGCATTTTATTGTTGAACATGCTGAGGACTAACGCGCCAAATCTCGCTCCATAG
idx 19 locidx 962
13 C
18 (13, 5, 5, 0)
[23 0 0 0]
17 T
22 (17, 5, 5, 0)
[ 0 0 23 0]
26 G
31 (26, 5, 5, 0)
[ 0 0 0 23]
81 G
86 (81, 5, 5, 0)
[ 0 0 0 23]
85 T
90 (85, 5, 5, 0)
[ 0 0 23 0]
CAACCGAATGGCCCCCTTTTCGCATAGTGACAGAGTAGACGCGTGCATGCCTGATCAGGGCTAAGGTTTTTAGTACATGGTGCAGT
idx 19 locidx 963
8 T
13 (8, 5, 5, 0)
[ 0 0 14 0]
10 T
15 (10, 5, 5, 0)
[ 0 0 14 0]
70 T
75 (70, 5, 5, 0)
[ 0 0 14 0]
74 G
79 (74, 5, 5, 0)
[ 0 0 0 14]
TCCCTAGATTTTGGGTGCATCAATGTGCTCCCAGTGGAGAGATAGTTCGACTCGCTCACGAAGCAATTATTGGCGAATGGTCAGCA
idx 19 locidx 964
0 A
5 (0, 5, 5, 0)
[ 0 21 0 0]
32 T
37 (32, 5, 5, 0)
[ 0 0 21 0]
66 C
71 (66, 5, 5, 0)
[21 0 0 0]
AGGTATGCTCGTAATTTAATAAAGTTCTGTCATCACAGAACCTGGTGGCTACGACTGAGAGGTTTGCGATCAGTGGCGTCCTGGCA
idx 19 locidx 965
6 A
11 (6, 5, 5, 0)
[ 0 20 0 0]
29 C
34 (29, 5, 5, 0)
[20 0 0 0]
CGTTAAAGCGATCAGGGGTGTCGTATTCGCGAATGCACTCGCAAGGCTCACTGCGCTAGTGAGCCCCTGGATCGTATGCGCTTTCC
idx 19 locidx 966
0 C
5 (0, 5, 5, 0)
[23 0 0 0]
7 C
12 (7, 5, 5, 0)
[23 0 0 0]
14 C
19 (14, 5, 5, 0)
[23 0 0 0]
17 A
22 (17, 5, 5, 0)
[ 0 23 0 0]
20 G
25 (20, 5, 5, 0)
[ 0 0 0 23]
29 T
34 (29, 5, 5, 0)
[ 0 0 23 0]
71 C
76 (71, 5, 5, 0)
[22 0 1 0]
CGTTCAGCTGGAAACAAAACGATTGCCGGTCACCAAGCGATAAACAGTCGGAGGTGGTGGTTGGGCCCATACGCAGACAACCCCTG
idx 19 locidx 967
29 T
34 (29, 5, 5, 0)
[ 0 0 18 0]
54 C
59 (54, 5, 5, 0)
[18 0 0 0]
56 C
61 (56, 5, 5, 0)
[18 0 0 0]
80 C
85 (80, 5, 5, 0)
[18 0 0 0]
ATATAGAAACAAAGCCCCTCACTCCTAGATCATGGGGCGGCCTATTGATGTTAGCGCAACTAGTGTTCAGTAGAGTGCGACCTCGC
idx 19 locidx 968
13 G
18 (13, 5, 5, 0)
[ 0 0 0 20]
44 G
49 (44, 5, 5, 0)
[ 0 0 0 20]
AACGAAATCTGCTGTCGTCGAGCATTTATACGCTGGATGTATATGAAAGGTACAAAAGTACTGCGGACCGAACCTATGACGATATG
idx 19 locidx 969
14 T
19 (14, 5, 5, 0)
[ 0 0 14 0]
49 C
54 (49, 5, 5, 0)
[14 0 0 0]
50 T
55 (50, 5, 5, 0)
[ 0 0 14 0]
CGAAACCGGCGCACTTCTCCTGGAATTCCAGCGCCACTTCGCCTAGCATCTGCGGTGTCTCAGACATGAAGAACGCGTAGAACTTG
idx 19 locidx 970
2 W
7 (2, 5, 5, 0)
[ 0 12 18 0]
11 T
16 (11, 5, 5, 0)
[ 0 0 30 0]
73 G
78 (73, 5, 5, 0)
[ 0 0 0 30]
CGWTGCTGCTCTCCATCGTGGTCAGAAATGAACTTTTTTTTAGGTCCCCTTTGAGGCTACTTACCGAGTGTACGATATGCGAACAG
idx 19 locidx 971
15 A
20 (15, 5, 5, 0)
[ 0 21 0 0]
47 G
52 (47, 5, 5, 0)
[ 0 0 0 21]
56 G
61 (56, 5, 5, 0)
[ 0 0 0 21]
67 G
72 (67, 5, 5, 0)
[ 0 0 0 21]
75 T
80 (75, 5, 5, 0)
[ 0 0 21 0]
81 A
86 (81, 5, 5, 0)
[ 0 21 0 0]
ACGGGCAGCCATCTGAAAGCGCGGAATTTGATAAGAGTTAGTACCTAGATTGCATTGCTGTGTGCGCGTGTTCGATTGAAAATGCC
idx 19 locidx 972
6 T
11 (6, 5, 5, 0)
[ 0 0 18 0]
10 G
15 (10, 5, 5, 0)
[ 0 0 0 18]
32 T
37 (32, 5, 5, 0)
[ 0 0 18 0]
CATCCCTAAGGTAGAGATTAGACTGAGCCCTATCCTAGCTATGCTTATTTCGACGTCAAGATGCGGGATTGGCAAGCACCGCCGCT
idx 19 locidx 973
23 A
28 (23, 5, 5, 0)
[ 0 24 0 0]
39 C
44 (39, 5, 5, 0)
[24 0 0 0]
46 C
51 (46, 5, 5, 0)
[24 0 0 0]
52 A
57 (52, 5, 5, 0)
[ 0 24 0 0]
76 T
81 (76, 5, 5, 0)
[ 0 0 24 0]
CGCCTCTACATGAAAGGCTCTACAGGTGCTCACTTCAGGCCTACCTCCCTGGATATGCCGGTAATACTTTACCGATTGGTGAGAGT
idx 19 locidx 974
8 A
13 (8, 5, 5, 0)
[ 0 19 0 0]
38 T
43 (38, 5, 5, 0)
[ 0 0 19 0]
67 A
72 (67, 5, 5, 0)
[ 0 19 0 0]
72 K
77 (72, 5, 5, 0)
[ 0 0 11 8]
74 A
79 (74, 5, 5, 0)
[ 0 19 0 0]
TTGGTATTAAGGCGGAGCCCGAGGCTAGTGTGCGCTCGTACCTTATACGTTCCTGTCCTTAAGTAGTAGAAGKAAACGTAGTTTTG
idx 19 locidx 975
37 A
42 (37, 5, 5, 0)
[ 0 24 0 0]
CGGATACATATGTGCAGTGCGGCGATGTTCACCTCGCAACCTTACGAATTCGAAGACCGTGTTAGATATGGGGCCATGCCTTTATC
idx 19 locidx 976
0 A
5 (0, 5, 5, 0)
[ 0 24 0 0]
2 G
7 (2, 5, 5, 0)
[ 0 0 0 24]
25 C
30 (25, 5, 5, 0)
[24 0 0 0]
31 A
36 (31, 5, 5, 0)
[ 0 24 0 0]
34 C
39 (34, 5, 5, 0)
[24 0 0 0]
66 A
71 (66, 5, 5, 0)
[ 0 24 0 0]
84 G
89 (84, 5, 5, 0)
[ 0 0 0 24]
AGGCCTGTGGATCCGGCATGATCCCCCGCTTAAACTTTCATGGAAAATTGCGCGGTCCCCCGGAAGAAGCGAAGGAACCGGGCAGG
idx 19 locidx 977
1 T
6 (1, 5, 5, 0)
[ 0 0 23 0]
65 A
70 (65, 5, 5, 0)
[ 0 23 0 0]
CTGCACAAGCTTTGAGCACGGGAGAGCCCGAGACAAGCTAAGGCAATATACGTCCAGTACTTAAGACTCATACAACCGTACATCCG
idx 19 locidx 978
6 G
11 (6, 5, 5, 0)
[ 0 0 0 22]
30 T
35 (30, 5, 5, 0)
[ 0 0 22 0]
37 C
42 (37, 5, 5, 0)
[22 0 0 0]
63 A
68 (63, 5, 5, 0)
[ 0 22 0 0]
65 C
70 (65, 5, 5, 0)
[22 0 0 0]
78 T
83 (78, 5, 5, 0)
[ 0 0 22 0]
ATGAGCGCGGCATTAGTGAGATGGGAAGTATCGCGTACACCCGGAGACTACGCCCGTGCCGACAGCGGGCCTATGATGTCGGAGCT
idx 19 locidx 979
13 C
18 (13, 5, 5, 0)
[22 0 0 0]
42 A
47 (42, 5, 5, 0)
[ 0 22 0 0]
47 T
52 (47, 5, 5, 0)
[ 0 0 22 0]
81 C
86 (81, 5, 5, 0)
[22 0 0 0]
CGGTATCGATAGTCGGGTAATATACAGCGGGTCTCTTCAATCAGGGTTCGCATAACGCAGGTCAGATGACACGTTTTTGCACTTTG
idx 19 locidx 980
9 G
14 (9, 5, 5, 0)
[ 0 0 0 18]
10 G
15 (10, 5, 5, 0)
[ 0 0 0 18]
12 T
17 (12, 5, 5, 0)
[ 0 0 18 0]
14 C
19 (14, 5, 5, 0)
[18 0 0 0]
22 G
27 (22, 5, 5, 0)
[ 0 0 0 18]
29 A
34 (29, 5, 5, 0)
[ 0 18 0 0]
37 C
42 (37, 5, 5, 0)
[18 0 0 0]
52 C
57 (52, 5, 5, 0)
[18 0 0 0]
CTTAAGCTTGGGTTCCCAGCGGGTAGCTGACCTTCTACAGCTGCCCAGTGAGCTCCGCTCTGCCCAGGCTGCCGGCCCAAACGTAT--
idx 19 locidx 981
7 C
12 (7, 5, 5, 0)
[22 0 0 0]
52 C
57 (52, 5, 5, 0)
[22 0 0 0]
61 A
66 (61, 5, 5, 0)
[ 0 22 0 0]
CAGGTGTCCCTTAGAGGGGGGTATCAAGAGTAACGGACACTAAGTGGTAACGCCAGAAGGCACGACTGCCGCTGGGTCGAGCACAC
idx 19 locidx 982
9 C
14 (9, 5, 5, 0)
[22 0 0 0]
32 T
37 (32, 5, 5, 0)
[ 0 0 22 0]
34 G
39 (34, 5, 5, 0)
[ 0 0 0 22]
56 C
61 (56, 5, 5, 0)
[22 0 0 0]
64 G
69 (64, 5, 5, 0)
[ 0 0 0 22]
65 G
70 (65, 5, 5, 0)
[ 0 0 0 22]
72 G
77 (72, 5, 5, 0)
[ 0 0 0 22]
73 G
78 (73, 5, 5, 0)
[ 0 0 0 22]
GGTCTGTGTCCCGTCTTGTATTTTAAGGGTGATGGTTTCTCGAACTCCGGGAGCACCAGCAAGTGGTGATCCGGGGATTTAACCGA
idx 19 locidx 983
34 G
39 (34, 5, 5, 0)
[ 0 0 0 22]
47 A
52 (47, 5, 5, 0)
[ 0 22 0 0]
48 T
53 (48, 5, 5, 0)
[ 0 0 22 0]
80 T
85 (80, 5, 5, 0)
[ 0 0 22 0]
82 G
87 (82, 5, 5, 0)
[ 0 0 0 22]
GCTGCAAGTTCTGCTCGAATACAACCGGGAAATTGCTCGAGACATTCATCGCGGCAAGTGGAGCCCCTGCTGGCAGCCCCTTGGCT
idx 19 locidx 984
23 C
28 (23, 5, 5, 0)
[21 0 0 0]
29 G
34 (29, 5, 5, 0)
[ 0 0 0 21]
GAAAATTATGCGTTGTAAAGCAGCCAACAGTGCAAACAATACAAAGGCCCAATCGGTTACTGACTCTGCGCATGCGTAAATGCAGA
idx 19 locidx 985
25 T
30 (25, 5, 5, 0)
[ 0 0 21 0]
51 T
56 (51, 5, 5, 0)
[ 0 0 21 0]
81 C
86 (81, 5, 5, 0)
[21 0 0 0]
AGTCTATCTGACGAGGGAAGCTAACTCGGCGAATAGATTGTTGCAGAACACTACTGAGGGTCTAGATTAGCAAGGATCTTCCATTT
idx 19 locidx 986
8 T
13 (8, 5, 5, 0)
[ 0 0 21 0]
18 G
23 (18, 5, 5, 0)
[ 0 0 0 21]
41 T
46 (41, 5, 5, 0)
[ 0 0 21 0]
68 T
73 (68, 5, 5, 0)
[ 0 0 21 0]
72 A
77 (72, 5, 5, 0)
[ 0 21 0 0]
75 T
80 (75, 5, 5, 0)
[ 0 0 21 0]
80 T
85 (80, 5, 5, 0)
[ 0 0 21 0]
GTTCAGTGTGCACTACGAGTCCAAATAAGATCCTCTGCATGTCCAGTGAAGTCAGCCGTGTCCTAACATTGTACATGGAATATTCT
idx 19 locidx 987
8 C
13 (8, 5, 5, 0)
[21 0 0 0]
67 G
72 (67, 5, 5, 0)
[ 0 0 0 21]
70 G
75 (70, 5, 5, 0)
[ 0 0 0 21]
80 G
85 (80, 5, 5, 0)
[ 0 0 0 21]
AAGCGCGCCTGAAGAATCTGGAAGTCACAATGTTACGCTCTCGTCCTCAAGTAAATTTATCATGTAAGGGGTATCGACGTGCAAGG
idx 19 locidx 988
21 T
26 (21, 5, 5, 0)
[ 0 0 20 0]
41 T
46 (41, 5, 5, 0)
[ 0 0 20 0]
48 C
53 (48, 5, 5, 0)
[20 0 0 0]
TACTTCGGCGACTGAATGATATTAAATTGGTTACTTAGGCTTATCGAGCGGGGACTTGGGCGGTTTAACTCTGTCGACAAGAACTG
idx 19 locidx 989
9 G
14 (9, 5, 5, 0)
[ 0 0 0 20]
26 A
31 (26, 5, 5, 0)
[ 0 20 0 0]
41 A
46 (41, 5, 5, 0)
[ 0 20 0 0]
73 G
78 (73, 5, 5, 0)
[ 0 0 0 20]
TTACCAGCTGGCGTTCCTTCAGAGGAACCTTAGGTGGTAATACCAAAATCCCTGCGCAATGCGCATGTCTTGCGCCTCTTGATATT
idx 19 locidx 990
11 T
16 (11, 5, 5, 0)
[ 0 0 20 0]
56 T
61 (56, 5, 5, 0)
[ 0 0 20 0]
65 C
70 (65, 5, 5, 0)
[20 0 0 0]
TCGTAGCAATCTGTGGCAGGTCTGGGTACTCTTCTTTGAACATTTGGCTTTTCCATTGCCAAGATCAAGATCGCGACTTAAAAATA
idx 19 locidx 991
7 G
12 (7, 5, 5, 0)
[ 0 0 0 19]
49 T
54 (49, 5, 5, 0)
[ 0 0 19 0]
51 C
56 (51, 5, 5, 0)
[19 0 0 0]
68 A
73 (68, 5, 5, 0)
[ 0 19 0 0]
78 T
83 (78, 5, 5, 0)
[ 0 0 19 0]
CCAATAAGGTCCCGCTTTCTTCATATGCTAAGACGGGTTTATTGCCCCCTGCCCAGGTCCTCCTTCTTACCGCCAGTCTATATTGA
idx 19 locidx 992
46 G
51 (46, 5, 5, 0)
[ 0 0 0 19]
54 C
59 (54, 5, 5, 0)
[19 0 0 0]
72 T
77 (72, 5, 5, 0)
[ 0 0 19 0]
74 A
79 (74, 5, 5, 0)
[ 0 19 0 0]
81 G
86 (81, 5, 5, 0)
[ 0 0 0 19]
84 T
89 (84, 5, 5, 0)
[ 0 0 19 0]
TATAGGCGAGGGAATCCTAAGGTGAATAGGTTCGACCGAGTACACAGGGACTATCACGGTCGGGTCCAGCTGTCAAGAACGGCCTG
idx 19 locidx 993
0 A
5 (0, 5, 5, 0)
[ 0 20 0 0]
8 C
13 (8, 5, 5, 0)
[20 0 0 0]
12 T
17 (12, 5, 5, 0)
[ 0 0 20 0]
14 C
19 (14, 5, 5, 0)
[20 0 0 0]
16 A
21 (16, 5, 5, 0)
[ 0 20 0 0]
27 A
32 (27, 5, 5, 0)
[ 0 20 0 0]
53 C
58 (53, 5, 5, 0)
[20 0 0 0]
59 T
64 (59, 5, 5, 0)
[ 0 0 20 0]
AGATAACTCATCTTCGAGATCCCTGACACTAGGCACCACTGTACGACCTTCAACATTGCTAACGTTGTAGTTGTTGGGGACTAGGT
idx 19 locidx 994
4 T
9 (4, 5, 5, 0)
[ 0 0 19 0]
67 T
72 (67, 5, 5, 0)
[ 0 0 19 0]
74 G
79 (74, 5, 5, 0)
[ 0 0 0 19]
TTTCTAGCTCGAAGGGCGGCGAGAGCCGAACCCGTTTGCGCGAAAGCCAGAAGTTACAACGAAGAACTACGAAAGTGGTGCGTAAA
idx 19 locidx 995
15 G
20 (15, 5, 5, 0)
[ 0 0 0 20]
19 G
24 (19, 5, 5, 0)
[ 0 0 0 20]
32 G
37 (32, 5, 5, 0)
[ 0 0 0 20]
36 A
41 (36, 5, 5, 0)
[ 0 20 0 0]
AGCTTTACTAGACGGGGTTGCTCCAAAAAGGTGTCAAATGACGTCACCTAACACATTTAATACCCCTTGACGCAGTGTGGCTAGAC
idx 19 locidx 996
13 T
17 (13, 5, 5, 1)
[ 0 0 17 0]
15 A
19 (15, 5, 5, 1)
[ 0 17 0 0]
35 T
39 (35, 5, 5, 1)
[ 0 0 17 0]
50 A
54 (50, 5, 5, 1)
[ 0 17 0 0]
54 C
58 (54, 5, 5, 1)
[17 0 0 0]
ATGTTCCC-TAGATTAACACAACAGGTTTCTTCCCTCGGTGACTAACCATAGGACCCTTGCAAATGGAGCCGCTAGCACCGACTAC
idx 19 locidx 997
23 A
28 (23, 5, 5, 0)
[ 0 17 0 0]
32 G
37 (32, 5, 5, 0)
[ 0 0 0 17]
34 A
39 (34, 5, 5, 0)
[ 0 17 0 0]
37 T
42 (37, 5, 5, 0)
[ 0 0 17 0]
64 A
69 (64, 5, 5, 0)
[ 0 17 0 0]
76 T
81 (76, 5, 5, 0)
[ 0 0 17 0]
CTTTGGTCGTAGGTGAATCAGGTACTGTACCGGAAGGTTTACCACGTTGTTATGAAGGCTAAAGACAGTTATGTTGTGCCCCCCGC
idx 19 locidx 998
20 G
25 (20, 5, 5, 0)
[ 0 0 0 16]
43 A
48 (43, 5, 5, 0)
[ 0 16 0 0]
CACGGGCGTTCCACATCGATGAGGGGTTCCCAAGTTCATGGTGACGACTTCGAATCTACCTAAGGCAACATAAAGTCTGCGCAGAC
idx 19 locidx 999
39 C
44 (39, 5, 5, 0)
[14 0 0 0]
64 T
69 (64, 5, 5, 0)
[ 0 0 14 0]
84 C
89 (84, 5, 5, 0)
[14 0 0 0]
TAGGTCATCGCCGTGCCCTCTGTTACATGGTTGTTTCCTCGGTTAGCTATAAATATAGGTGCACTTTATACGTTTTCGCGTAGGCG
In [77]:
seq
Out[77]:
'TGGGGTATGTGGTCAATCCATAGACATTATGCGTTCTTCGCACCAGTATTCCACACATTTTATCTAACGAGATGTGTGCCCAAACG'
In [42]:
def merge(name, assemblies, rename_dict=None):
"""
Creates and returns a new Assembly object in which samples from two or more
Assembly objects with matching names are 'merged'. Merging does not affect
the actual files written on disk, but rather creates new Samples that are
linked to multiple data files, and with stats summed.
# merge two assemblies
new = ip.merge('newname', (assembly1, assembly2))
# merge two assemblies and rename samples
rename = {"1A_0", "A", "1B_0", "A"}
new = ip.merge('newname', (assembly1, assembly2), rename_dict=rename)
"""
# create new Assembly
merged = Assembly(name)
# one or multiple assemblies?
try:
_ = len(assemblies)
except TypeError:
assemblies = [assemblies]
# iterate over all sample names from all Assemblies
for data in assemblies:
# make a deepcopy
ndata = copy.deepcopy(data)
for sname, sample in ndata.samples.items():
# rename sample if in rename dict
if sname in rename_dict:
sname = rename_dict[sname]
sample.name = sname
# is it in the merged assembly already
if sname in merged.samples:
msample = merged.samples[sname]
# update stats
msample.stats.reads_raw += sample.stats.reads_raw
if sample.stats.reads_passed_filter:
msample.stats.reads_passed_filter += sample.stats.reads_passed_filter
# append files
msample.files.fastqs.append(sample.files.fastqs)
msample.files.edits.append(sample.files.edits)
# do not allow state >2 at merging (requires reclustering)
# if merging WITHIN samples.
msample.stats.state = min(sample.stats.state, 2)
# merge its stats and files
else:
merged.samples[sname] = sample
# Merged assembly inherits max of hackers values (max frag length)
merged.hackersonly.max_fragment_length = max(
[i.hackersonly.max_fragment_length for i in assemblies])
# Set the values for some params that don't make sense inside mergers
merged_names = ", ".join([i.name for i in assemblies])
merged.params.raw_fastq_path = "Merged: " + merged_names
merged.params.barcodes_path = "Merged: " + merged_names
merged.params.sorted_fastq_path = "Merged: " + merged_names
# return the new Assembly object
merged.save()
return merged
Content source: dereneaton/ipyrad
Similar notebooks: