Graph Image Generator Service Example

In [16]:

    

import requests
import pprint
from IPython.display import Image, SVG

# This is your service IP address.  You need to modify this!
BASE = 'http://52.40.167.60:5000/'

# Helper function to POST a local CX file
def post_file(url, file_name):
    with open(file_name, 'r') as f:
        return requests.post(url, data=f)

# Check server is actually working
res = requests.get(BASE)
pp = pprint.PrettyPrinter(indent=4)
pp.pprint(res.json())


    

    




{   'build': '2-19-2016',
    'description': 'Network image generator service.  This service generates '
                   'network images on the fly from any CX JSON.',
    'documents': 'https://github.com/cytoscape-ci/graph-image-generator',
    'name': 'graph-image-generator',
    'version': 'v1'}

In [17]:

    

bitmap_image_url = BASE + 'image'
res = post_file(bitmap_image_url, './gal_filtered_2.json')
Image(data=res.content)


    

    
Out[17]:

In [12]:

    

# Test Bel Network
res = post_file(bitmap_image_url, 'asCX2.json')
Image(data=res.content)


    

    




---------------------------------------------------------------------------
FileNotFoundError                         Traceback (most recent call last)
<ipython-input-12-720ba85ec8e3> in <module>()
      1 # Test Bel Network
----> 2 res = post_file(bitmap_image_url, 'asCX2.json')
      3 Image(data=res.content)

<ipython-input-3-b0254107521f> in post_file(url, file_name)
      8 # Helper function to POST a local CX file
      9 def post_file(url, file_name):
---> 10     with open(file_name, 'r') as f:
     11         return requests.post(url, data=f)
     12 

FileNotFoundError: [Errno 2] No such file or directory: 'asCX2.json'

In [4]:

    

svg_image_url = BASE + 'image/svg'
res = post_file(svg_image_url, 'gal_filtered_2.json')

# print(res.content)
SVG(data=res.content)


    

    
Out[4]:

In [5]:

    

svg_image_url = BASE + 'image/graphviz/svg'
res = post_file(svg_image_url, 'gal_filtered_2.json')
SVG(data=res.content)


    

    
Out[5]: