Talks markdown generator for academicpages

Takes a TSV of talks with metadata and converts them for use with academicpages.github.io. This is an interactive Jupyter notebook (see more info here). The core python code is also in talks.py. Run either from the markdown_generator folder after replacing talks.tsv with one containing your data.

TODO: Make this work with BibTex and other databases, rather than Stuart's non-standard TSV format and citation style.


In [1]:
import pandas as pd
import os

Data format

The TSV needs to have the following columns: title, type, url_slug, venue, date, location, talk_url, description, with a header at the top. Many of these fields can be blank, but the columns must be in the TSV.

  • Fields that cannot be blank: title, url_slug, date. All else can be blank. type defaults to "Talk"
  • date must be formatted as YYYY-MM-DD.
  • url_slug will be the descriptive part of the .md file and the permalink URL for the page about the paper.
    • The .md file will be YYYY-MM-DD-[url_slug].md and the permalink will be https://[yourdomain]/talks/YYYY-MM-DD-[url_slug]
    • The combination of url_slug and date must be unique, as it will be the basis for your filenames

This is how the raw file looks (it doesn't look pretty, use a spreadsheet or other program to edit and create).


In [2]:
!cat talks.tsv


title	type	url_slug	venue	date	location	talk_url	description
Talk 1 on Relevant Topic in Your Field	Talk	talk-1	UC San Francisco, Department of Testing	2012-03-01	San Francisco, California		This is a description of your talk, which is a markdown files that can be all markdown-ified like any other post. Yay markdown!
Tutorial 1 on Relevant Topic in Your Field	Tutorial	tutorial-1	UC-Berkeley Institute for Testing Science	2013-03-01	Berkeley CA, USA	http://exampleurl.com	This is a description of your tutorial, note the different field in type. This is a markdown files that can be all markdown-ified like any other post. Yay markdown!
Talk 2 on Relevant Topic in Your Field	Talk	talk-2	London School of Testing	2014-02-01	London, UK	http://example2.com	This is a description of your talk, which is a markdown files that can be all markdown-ified like any other post. Yay markdown!
Conference Proceeding talk 3 on Relevant Topic in Your Field	Conference proceedings talk	talk-3	Testing Institute of America 2014 Annual Conference	2014-03-01	Los Angeles, CA		This is a description of your conference proceedings talk, note the different field in type. You can put anything in this field.

Import TSV

Pandas makes this easy with the read_csv function. We are using a TSV, so we specify the separator as a tab, or \t.

I found it important to put this data in a tab-separated values format, because there are a lot of commas in this kind of data and comma-separated values can get messed up. However, you can modify the import statement, as pandas also has read_excel(), read_json(), and others.


In [3]:
talks = pd.read_csv("talks.tsv", sep="\t", header=0)
talks


Out[3]:
title type url_slug venue date location talk_url description
0 Talk 1 on Relevant Topic in Your Field Talk talk-1 UC San Francisco, Department of Testing 2012-03-01 San Francisco, California NaN This is a description of your talk, which is a...
1 Tutorial 1 on Relevant Topic in Your Field Tutorial tutorial-1 UC-Berkeley Institute for Testing Science 2013-03-01 Berkeley CA, USA http://exampleurl.com This is a description of your tutorial, note t...
2 Talk 2 on Relevant Topic in Your Field Talk talk-2 London School of Testing 2014-02-01 London, UK http://example2.com This is a description of your talk, which is a...
3 Conference Proceeding talk 3 on Relevant Topic... Conference proceedings talk talk-3 Testing Institute of America 2014 Annual Confe... 2014-03-01 Los Angeles, CA NaN This is a description of your conference proce...

Escape special characters

YAML is very picky about how it takes a valid string, so we are replacing single and double quotes (and ampersands) with their HTML encoded equivilents. This makes them look not so readable in raw format, but they are parsed and rendered nicely.


In [4]:
html_escape_table = {
    "&": "&",
    '"': """,
    "'": "'"
    }

def html_escape(text):
    if type(text) is str:
        return "".join(html_escape_table.get(c,c) for c in text)
    else:
        return "False"

Creating the markdown files

This is where the heavy lifting is done. This loops through all the rows in the TSV dataframe, then starts to concatentate a big string (md) that contains the markdown for each type. It does the YAML metadata first, then does the description for the individual page.


In [5]:
loc_dict = {}

for row, item in talks.iterrows():
    
    md_filename = str(item.date) + "-" + item.url_slug + ".md"
    html_filename = str(item.date) + "-" + item.url_slug 
    year = item.date[:4]
    
    md = "---\ntitle: \""   + item.title + '"\n'
    md += "collection: talks" + "\n"
    
    if len(str(item.type)) > 3:
        md += 'type: "' + item.type + '"\n'
    else:
        md += 'type: "Talk"\n'
    
    md += "permalink: /talks/" + html_filename + "\n"
    
    if len(str(item.venue)) > 3:
        md += 'venue: "' + item.venue + '"\n'
        
    if len(str(item.location)) > 3:
        md += "date: " + str(item.date) + "\n"
    
    if len(str(item.location)) > 3:
        md += 'location: "' + str(item.location) + '"\n'
           
    md += "---\n"
    
    
    if len(str(item.talk_url)) > 3:
        md += "\n[More information here](" + item.talk_url + ")\n" 
        
    
    if len(str(item.description)) > 3:
        md += "\n" + html_escape(item.description) + "\n"
        
        
    md_filename = os.path.basename(md_filename)
    #print(md)
    
    with open("../_talks/" + md_filename, 'w') as f:
        f.write(md)

These files are in the talks directory, one directory below where we're working from.


In [6]:
!ls ../_talks


2012-03-01-talk-1.md	  2014-02-01-talk-2.md
2013-03-01-tutorial-1.md  2014-03-01-talk-3.md

In [7]:
!cat ../_talks/2013-03-01-tutorial-1.md


---
title: "Tutorial 1 on Relevant Topic in Your Field"
collection: talks
type: "Tutorial"
permalink: /talks/2013-03-01-tutorial-1
venue: "UC-Berkeley Institute for Testing Science"
date: 2013-03-01
location: "Berkeley CA, USA"
---

[More information here](http://exampleurl.com)

This is a description of your tutorial, note the different field in type. This is a markdown files that can be all markdown-ified like any other post. Yay markdown!