An Introduction to exatomic

Exatomic is a package that facilitates data analysis for computational chemistry.

Key features of exatomic include:

  • Parsing of quantum chemistry software output
  • Visualization of molecules, orbitals
  • Dataframe based data organization

Basics of exatomic

  • Tutorial of basic usage and syntax
  • Demonstrates how to load/manipulate dataframe data

XYZ Tutorial

  • Load an XYZ trajectory
  • Visualize the structure
  • Examine basic data objects associated with/derived from the structure

Visualization of Molecular Orbitals

  • Tutorial on parsing data from wave function theory software
  • Visualization of molecular orbitals
  • Computation of overlap, density matrix, and other manipulations stemming from the basis set, order, and coefficient matrix

NWChem

  • NWChem is a computational chemistry software

QE

  • QE is primarily a solid state physics simulation software