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Deep Learning Image Registration:
Scalable High-Performance Image Registration Framework by Unsupervised Deep Feature Representations Learning
Deep Learning in Medical Image Analysis
Learning to Align from Scratch
Deep Learning in Medical Image Analysis (IDEA Research Lab)(PDF Presentation)
Unsupervised deep feature learning for deformable registration of MR brain images.
Deep Adaptive Log-Demons: Diffeomorphic Image Registration with Very Large Deformations.
Image Registration:
Vaa3D
Current trends in medical image registration and fusion
Image fusion of mass spectrometry and microscopy: a multimodality paradigm for molecular tissue mapping
Medical image registration using sparse coding of image patches
3D Multimodal Medical Image Fusion and Evaluation of Diseases
Multimodal fusion of brain imaging data: A key to finding the missing link(s) in complex mental illness.
WBIR 2016 -7th International Workshop on Biomedical Image Registration – July 1, Las Vegas, Nevada, USA
Big Data:
Deep Learning with Apache-Spark and Tensorflow
GPU Computing with Apache Spark and Python with Image Registration Example
Quantitative Big Imaging Course (2016)
Quantitative Big Imaging Course
Using Anaconda with PySpark for Distributed Language Processing on a Hadoop Cluster
10 Ways to query hadoop with sql- note Spark SQL
Multiprocessing in Python
Interactive Data Visualization with D3, Python and MongoDB
Libraries:
Libraries for Julia data analysis
DEEPLEARNING4J: Open-source, distributed, deep-learning library for the JVM
Getting started with Julia competition
Quantitative finance in Julia
Quant Finance
Deep learning and value investing
General Tutorials:
Awesome Machine Learning
Machine Learning Tutorials
Scikit-learn Tutorial
Creating an LMDB database in Python
A gallery of interesting IPython Notebooks
Numerical Python
IDE/Notebook Tips and Tricks:
Setting up your spark/spark-sql development environment in PyCharm
How to link pycharm with pyspark
IPython Notebook Tips
Better Python APIs
Numba just in time compilation
General:
Null-byte How-Tos
Twilio - send SMS from python
Data Visualizations and D3.js
Python interactive visualization with Bokeh
An opensource javascript library to load, display and render maps from multiple sources on web pages.
Faster R-CNN python implementation
40 Computer Science Terms Explained
Synthetic Biology iGEM
Computational Neuroscience
NeuralEnsemble is a community-based initiative to promote and co-ordinate open-source software development in neuroscience
X-windows PhasePlane plus Auto
The Brian spiking neural network simulator - may be fun to build basal ganglia model
Editor/Shell:
Learning top vi key bindings
Awesome emacs
Absolute-beginners-guide-to-emacs
Using TMUX
Tmux - the terminal multiplexer
Awesome-awesomeness
Awesome Shell
Stanford CS Core Curriculum
CS106B - Programming Abstractions
CS107 - Computer Organization & Systems
CS110 - Principles of Computer Systems>
CS103 - Mathematical Foundations of Computing>
CS109 - Intro to Probability for Computer Scientists>
CS161 - Data Structures and Algorithms>
Important Papers:
Closer View of the Brain
The Big and the Small: Challenges of Imaging the Brain’s Circuits
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