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In [7]:

    
from rdflib import *
import pandas as pd
import slugify



In [3]:

    
sio = Graph()
sio.load('http://semanticscience.org/ontology/sio.owl',format='xml')

chear = Graph()
chear.load('chear.ttl',format='turtle')



In [5]:

    
sio_mappings = pd.DataFrame.from_records(data=list(sio.query('select ?class ?label where { ?class a owl:Class; rdfs:label ?label}',
                                                   initNs=dict(owl=OWL, rdfs=RDFS))), 
                                         columns=['class','label'] )









    Out[5]:







  
    
      
      class
      label
    
  
  
    
      0
      http://semanticscience.org/resource/SIO_001025
      prognosis
    
    
      1
      http://semanticscience.org/resource/SIO_000999
      procedure
    
    
      2
      http://semanticscience.org/resource/SIO_000165
      thesis document
    
    
      3
      http://semanticscience.org/resource/SIO_011105
      protactinium atom
    
    
      4
      http://semanticscience.org/resource/SIO_001349
      gene-disease association linked with chromosom...
    
    
      5
      http://semanticscience.org/resource/SIO_000783
      spatial boundary
    
    
      6
      http://semanticscience.org/resource/SIO_000170
      diary
    
    
      7
      http://semanticscience.org/resource/SIO_000017
      function
    
    
      8
      http://semanticscience.org/resource/SIO_001071
      text span start position
    
    
      9
      http://semanticscience.org/resource/SIO_010432
      ligand
    
    
      10
      http://semanticscience.org/resource/SIO_000519
      bar
    
    
      11
      http://semanticscience.org/resource/SIO_000921
      dependent variable
    
    
      12
      http://semanticscience.org/resource/SIO_010309
      catabolism
    
    
      13
      http://semanticscience.org/resource/SIO_001054
      measuring
    
    
      14
      http://semanticscience.org/resource/SIO_001294
      very poor quality
    
    
      15
      http://semanticscience.org/resource/SIO_011078
      bohrium atom
    
    
      16
      http://semanticscience.org/resource/SIO_001144
      maintenance of frequency of process
    
    
      17
      http://semanticscience.org/resource/SIO_001191
      SOAP web service
    
    
      18
      http://semanticscience.org/resource/SIO_001295
      poor quality
    
    
      19
      http://semanticscience.org/resource/SIO_010283
      chemical transport
    
    
      20
      http://semanticscience.org/resource/SIO_011070
      astatine atom
    
    
      21
      http://semanticscience.org/resource/SIO_010379
      virus
    
    
      22
      http://semanticscience.org/resource/SIO_001125
      regulation of transcription
    
    
      23
      http://semanticscience.org/resource/SIO_000104
      language
    
    
      24
      http://semanticscience.org/resource/SIO_011044
      rhodium atom
    
    
      25
      http://semanticscience.org/resource/SIO_000907
      heatmap
    
    
      26
      http://semanticscience.org/resource/SIO_000593
      interacting
    
    
      27
      http://semanticscience.org/resource/SIO_001009
      toxic
    
    
      28
      http://semanticscience.org/resource/SIO_000038
      1D extent quantity
    
    
      29
      http://semanticscience.org/resource/SIO_010517
      isomerization reaction
    
    
      ...
      ...
      ...
    
    
      1514
      http://semanticscience.org/resource/SIO_000876
      student advisor role
    
    
      1515
      http://semanticscience.org/resource/SIO_001393
      post-translational modification
    
    
      1516
      http://semanticscience.org/resource/SIO_000613
      ordinal position
    
    
      1517
      http://semanticscience.org/resource/SIO_000986
      functional rna coding gene
    
    
      1518
      http://semanticscience.org/resource/SIO_011018
      potassium atom
    
    
      1519
      http://semanticscience.org/resource/SIO_000868
      sorrow
    
    
      1520
      http://semanticscience.org/resource/SIO_001293
      quality descriptor
    
    
      1521
      http://semanticscience.org/resource/SIO_010525
      biochemical pathway
    
    
      1522
      http://semanticscience.org/resource/SIO_001335
      node
    
    
      1523
      http://semanticscience.org/resource/SIO_000542
      to serve as
    
    
      1524
      http://semanticscience.org/resource/SIO_000115
      identifier
    
    
      1525
      http://semanticscience.org/resource/SIO_001308
      satisfaction qualifier
    
    
      1526
      http://semanticscience.org/resource/SIO_011051
      tellurium atom
    
    
      1527
      http://semanticscience.org/resource/SIO_000333
      3D cartesian coordinate
    
    
      1528
      http://semanticscience.org/resource/SIO_000308
      edition number
    
    
      1529
      http://semanticscience.org/resource/SIO_010288
      biochemical activation
    
    
      1530
      http://semanticscience.org/resource/SIO_000590
      biosynthesis
    
    
      1531
      http://semanticscience.org/resource/SIO_000166
      honor's thesis
    
    
      1532
      http://semanticscience.org/resource/SIO_000753
      column
    
    
      1533
      http://semanticscience.org/resource/SIO_000600
      structure
    
    
      1534
      http://semanticscience.org/resource/SIO_010023
      tertiary structure descriptor
    
    
      1535
      http://semanticscience.org/resource/SIO_000852
      loneliness
    
    
      1536
      http://semanticscience.org/resource/SIO_001029
      peer reviewed article
    
    
      1537
      http://semanticscience.org/resource/SIO_000848
      interest
    
    
      1538
      http://semanticscience.org/resource/SIO_000111
      document section
    
    
      1539
      http://semanticscience.org/resource/SIO_010778
      optical isomer
    
    
      1540
      http://semanticscience.org/resource/SIO_001370
      slide
    
    
      1541
      http://semanticscience.org/resource/SIO_010096
      mature mRNA
    
    
      1542
      http://semanticscience.org/resource/SIO_001380
      protein family
    
    
      1543
      http://semanticscience.org/resource/SIO_001245
      standard score
    
  

1544 rows × 2 columns



In [12]:

    
sio_mappings['numeric_uri'] = [x.replace('http://semanticscience.org/resource/','sio:')
                               for x in sio_mappings['class']]
sio_mappings['label_uri'] = ['sio:'+''.join(w if w.isupper() else w.capitalize() for w in x.split())
                            for x in sio_mappings['label']]
sio_mappings









    Out[12]:







  
    
      
      class
      label
      numeric_uri
      label_uri
    
  
  
    
      0
      http://semanticscience.org/resource/SIO_001025
      prognosis
      sio:SIO_001025
      sio:Prognosis
    
    
      1
      http://semanticscience.org/resource/SIO_000999
      procedure
      sio:SIO_000999
      sio:Procedure
    
    
      2
      http://semanticscience.org/resource/SIO_000165
      thesis document
      sio:SIO_000165
      sio:ThesisDocument
    
    
      3
      http://semanticscience.org/resource/SIO_011105
      protactinium atom
      sio:SIO_011105
      sio:ProtactiniumAtom
    
    
      4
      http://semanticscience.org/resource/SIO_001349
      gene-disease association linked with chromosom...
      sio:SIO_001349
      sio:Gene-diseaseAssociationLinkedWithChromosom...
    
    
      5
      http://semanticscience.org/resource/SIO_000783
      spatial boundary
      sio:SIO_000783
      sio:SpatialBoundary
    
    
      6
      http://semanticscience.org/resource/SIO_000170
      diary
      sio:SIO_000170
      sio:Diary
    
    
      7
      http://semanticscience.org/resource/SIO_000017
      function
      sio:SIO_000017
      sio:Function
    
    
      8
      http://semanticscience.org/resource/SIO_001071
      text span start position
      sio:SIO_001071
      sio:TextSpanStartPosition
    
    
      9
      http://semanticscience.org/resource/SIO_010432
      ligand
      sio:SIO_010432
      sio:Ligand
    
    
      10
      http://semanticscience.org/resource/SIO_000519
      bar
      sio:SIO_000519
      sio:Bar
    
    
      11
      http://semanticscience.org/resource/SIO_000921
      dependent variable
      sio:SIO_000921
      sio:DependentVariable
    
    
      12
      http://semanticscience.org/resource/SIO_010309
      catabolism
      sio:SIO_010309
      sio:Catabolism
    
    
      13
      http://semanticscience.org/resource/SIO_001054
      measuring
      sio:SIO_001054
      sio:Measuring
    
    
      14
      http://semanticscience.org/resource/SIO_001294
      very poor quality
      sio:SIO_001294
      sio:VeryPoorQuality
    
    
      15
      http://semanticscience.org/resource/SIO_011078
      bohrium atom
      sio:SIO_011078
      sio:BohriumAtom
    
    
      16
      http://semanticscience.org/resource/SIO_001144
      maintenance of frequency of process
      sio:SIO_001144
      sio:MaintenanceOfFrequencyOfProcess
    
    
      17
      http://semanticscience.org/resource/SIO_001191
      SOAP web service
      sio:SIO_001191
      sio:SOAPWebService
    
    
      18
      http://semanticscience.org/resource/SIO_001295
      poor quality
      sio:SIO_001295
      sio:PoorQuality
    
    
      19
      http://semanticscience.org/resource/SIO_010283
      chemical transport
      sio:SIO_010283
      sio:ChemicalTransport
    
    
      20
      http://semanticscience.org/resource/SIO_011070
      astatine atom
      sio:SIO_011070
      sio:AstatineAtom
    
    
      21
      http://semanticscience.org/resource/SIO_010379
      virus
      sio:SIO_010379
      sio:Virus
    
    
      22
      http://semanticscience.org/resource/SIO_001125
      regulation of transcription
      sio:SIO_001125
      sio:RegulationOfTranscription
    
    
      23
      http://semanticscience.org/resource/SIO_000104
      language
      sio:SIO_000104
      sio:Language
    
    
      24
      http://semanticscience.org/resource/SIO_011044
      rhodium atom
      sio:SIO_011044
      sio:RhodiumAtom
    
    
      25
      http://semanticscience.org/resource/SIO_000907
      heatmap
      sio:SIO_000907
      sio:Heatmap
    
    
      26
      http://semanticscience.org/resource/SIO_000593
      interacting
      sio:SIO_000593
      sio:Interacting
    
    
      27
      http://semanticscience.org/resource/SIO_001009
      toxic
      sio:SIO_001009
      sio:Toxic
    
    
      28
      http://semanticscience.org/resource/SIO_000038
      1D extent quantity
      sio:SIO_000038
      sio:1DExtentQuantity
    
    
      29
      http://semanticscience.org/resource/SIO_010517
      isomerization reaction
      sio:SIO_010517
      sio:IsomerizationReaction
    
    
      ...
      ...
      ...
      ...
      ...
    
    
      1514
      http://semanticscience.org/resource/SIO_000876
      student advisor role
      sio:SIO_000876
      sio:StudentAdvisorRole
    
    
      1515
      http://semanticscience.org/resource/SIO_001393
      post-translational modification
      sio:SIO_001393
      sio:Post-translationalModification
    
    
      1516
      http://semanticscience.org/resource/SIO_000613
      ordinal position
      sio:SIO_000613
      sio:OrdinalPosition
    
    
      1517
      http://semanticscience.org/resource/SIO_000986
      functional rna coding gene
      sio:SIO_000986
      sio:FunctionalRnaCodingGene
    
    
      1518
      http://semanticscience.org/resource/SIO_011018
      potassium atom
      sio:SIO_011018
      sio:PotassiumAtom
    
    
      1519
      http://semanticscience.org/resource/SIO_000868
      sorrow
      sio:SIO_000868
      sio:Sorrow
    
    
      1520
      http://semanticscience.org/resource/SIO_001293
      quality descriptor
      sio:SIO_001293
      sio:QualityDescriptor
    
    
      1521
      http://semanticscience.org/resource/SIO_010525
      biochemical pathway
      sio:SIO_010525
      sio:BiochemicalPathway
    
    
      1522
      http://semanticscience.org/resource/SIO_001335
      node
      sio:SIO_001335
      sio:Node
    
    
      1523
      http://semanticscience.org/resource/SIO_000542
      to serve as
      sio:SIO_000542
      sio:ToServeAs
    
    
      1524
      http://semanticscience.org/resource/SIO_000115
      identifier
      sio:SIO_000115
      sio:Identifier
    
    
      1525
      http://semanticscience.org/resource/SIO_001308
      satisfaction qualifier
      sio:SIO_001308
      sio:SatisfactionQualifier
    
    
      1526
      http://semanticscience.org/resource/SIO_011051
      tellurium atom
      sio:SIO_011051
      sio:TelluriumAtom
    
    
      1527
      http://semanticscience.org/resource/SIO_000333
      3D cartesian coordinate
      sio:SIO_000333
      sio:3DCartesianCoordinate
    
    
      1528
      http://semanticscience.org/resource/SIO_000308
      edition number
      sio:SIO_000308
      sio:EditionNumber
    
    
      1529
      http://semanticscience.org/resource/SIO_010288
      biochemical activation
      sio:SIO_010288
      sio:BiochemicalActivation
    
    
      1530
      http://semanticscience.org/resource/SIO_000590
      biosynthesis
      sio:SIO_000590
      sio:Biosynthesis
    
    
      1531
      http://semanticscience.org/resource/SIO_000166
      honor's thesis
      sio:SIO_000166
      sio:Honor'sThesis
    
    
      1532
      http://semanticscience.org/resource/SIO_000753
      column
      sio:SIO_000753
      sio:Column
    
    
      1533
      http://semanticscience.org/resource/SIO_000600
      structure
      sio:SIO_000600
      sio:Structure
    
    
      1534
      http://semanticscience.org/resource/SIO_010023
      tertiary structure descriptor
      sio:SIO_010023
      sio:TertiaryStructureDescriptor
    
    
      1535
      http://semanticscience.org/resource/SIO_000852
      loneliness
      sio:SIO_000852
      sio:Loneliness
    
    
      1536
      http://semanticscience.org/resource/SIO_001029
      peer reviewed article
      sio:SIO_001029
      sio:PeerReviewedArticle
    
    
      1537
      http://semanticscience.org/resource/SIO_000848
      interest
      sio:SIO_000848
      sio:Interest
    
    
      1538
      http://semanticscience.org/resource/SIO_000111
      document section
      sio:SIO_000111
      sio:DocumentSection
    
    
      1539
      http://semanticscience.org/resource/SIO_010778
      optical isomer
      sio:SIO_010778
      sio:OpticalIsomer
    
    
      1540
      http://semanticscience.org/resource/SIO_001370
      slide
      sio:SIO_001370
      sio:Slide
    
    
      1541
      http://semanticscience.org/resource/SIO_010096
      mature mRNA
      sio:SIO_010096
      sio:MatureMrna
    
    
      1542
      http://semanticscience.org/resource/SIO_001380
      protein family
      sio:SIO_001380
      sio:ProteinFamily
    
    
      1543
      http://semanticscience.org/resource/SIO_001245
      standard score
      sio:SIO_001245
      sio:StandardScore
    
  

1544 rows × 4 columns



In [19]:

    
query = '''
select ?class (sample(?label) as ?label) (count(?super) as ?depth) where {
  ?class rdfs:label ?label.
  optional { ?class rdfs:subClassOf+ ?super. }
  filter (regex(str(?class),"^http://hadatac.org/ont/chear#.+"))
} group by ?class order by ?depth ?label
'''

chear_mappings = pd.DataFrame.from_records(data=list(chear.query(query,
                                                   initNs=dict(owl=OWL, rdfs=RDFS))), 
                                         columns=['class','label', 'depth'] )
chear_mappings









    Out[19]:







  
    
      
      class
      label
      depth
    
  
  
    
      0
      http://hadatac.org/ont/chear#PHEN2PHEN3
      2-hydroxyphenanthrene + 3-hydroxyphenanthrene
      0
    
    
      1
      http://hadatac.org/ont/chear#MCOCH
      Cyclohexane-1,2-dicarboxylic acid mono carboxy...
      0
    
    
      2
      http://hadatac.org/ont/chear#MHNCH
      Cyclohexane-1,2-dicarboxylic acid mono hydroxy...
      0
    
    
      3
      http://hadatac.org/ont/chear#homa_ir_unit
      HOMA-IR
      0
    
    
      4
      http://hadatac.org/ont/chear#MEOHTP
      Mono-2-ethyl-5-oxohexylterephthalate
      0
    
    
      5
      http://hadatac.org/ont/chear#PHET
      Phenanthrene tetrol
      0
    
    
      6
      http://hadatac.org/ont/chear#billion_parts_per...
      billion parts per microgram
      0
    
    
      7
      http://hadatac.org/ont/chear#international_uni...
      international units per litre
      0
    
    
      8
      http://hadatac.org/ont/chear#micrograms_per_gram
      microgram per gram
      0
    
    
      9
      http://hadatac.org/ont/chear#micrograms_per_de...
      micrograms per deciliter
      0
    
    
      10
      http://hadatac.org/ont/chear#micrograms_per_me...
      micrograms per meter cubed
      0
    
    
      11
      http://hadatac.org/ont/chear#microunits_per_mi...
      microunits per milliliter
      0
    
    
      12
      http://hadatac.org/ont/chear#milligram_per_gram
      milligram per gram
      0
    
    
      13
      http://hadatac.org/ont/chear#millimole_per_liter
      millimole per liter
      0
    
    
      14
      http://hadatac.org/ont/chear#million_parts_per...
      million parts per microgram
      0
    
    
      15
      http://hadatac.org/ont/chear#MECPTP
      mono-2-ethyl-5- carboxypentyl terephthalate (D...
      0
    
    
      16
      http://hadatac.org/ont/chear#MEHHTP
      mono-2-ethyl-5-hydroxyhexyl terephthalate (DEHTP)
      0
    
    
      17
      http://hadatac.org/ont/chear#MONP
      monooxoisononyl phthalate (DiNP)
      0
    
    
      18
      http://hadatac.org/ont/chear#parasites_per_mic...
      parasites per microgram
      0
    
    
      19
      http://hadatac.org/ont/chear#picomoles_per_mil...
      picomoles per milliliter
      0
    
    
      20
      http://hadatac.org/ont/chear#thousand_parts_pe...
      thousand parts per microgram
      0
    
    
      21
      http://hadatac.org/ont/chear#SamplePairing
      A Sample has a Pairing
      1
    
    
      22
      http://hadatac.org/ont/chear#Comment_90
      Abnormal hemoglobin variant observed
      1
    
    
      23
      http://hadatac.org/ont/chear#Acculturation
      Acculturation
      1
    
    
      24
      http://hadatac.org/ont/chear#ATIDU
      Alcohol, Tobacco, and Illicit Drug Use
      1
    
    
      25
      http://hadatac.org/ont/chear#AnalysisMode
      Analysis Mode
      1
    
    
      26
      http://hadatac.org/ont/chear#Analyte
      Analyte
      1
    
    
      27
      http://hadatac.org/ont/chear#Comment_38
      Analyzed at a later date than rest of samples ...
      1
    
    
      28
      http://hadatac.org/ont/chear#Anthropometry
      Anthropometry
      1
    
    
      29
      http://hadatac.org/ont/chear#AFSInstrument
      Atomic Fluorescence Spectroscopy Instrument
      1
    
    
      ...
      ...
      ...
      ...
    
    
      473
      http://hadatac.org/ont/chear#SomeElementarySchool
      Some Elementary School
      6
    
    
      474
      http://hadatac.org/ont/chear#SomeHighSchool
      Some High School
      6
    
    
      475
      http://hadatac.org/ont/chear#SomeMiddleSchool
      Some Middle School
      6
    
    
      476
      http://hadatac.org/ont/chear#Step
      Step
      6
    
    
      477
      http://hadatac.org/ont/chear#TechnicalPostJuni...
      Technical Post Junior College
      6
    
    
      478
      http://hadatac.org/ont/chear#UPLCMS
      Ultra Performance Liquid Chromatography - Mass...
      6
    
    
      479
      http://hadatac.org/ont/chear#Conception
      Conception
      7
    
    
      480
      http://hadatac.org/ont/chear#EducationGrade1
      Education Grade 1
      7
    
    
      481
      http://hadatac.org/ont/chear#EducationGrade2
      Education Grade 2
      7
    
    
      482
      http://hadatac.org/ont/chear#EducationGrade3
      Education Grade 3
      7
    
    
      483
      http://hadatac.org/ont/chear#EducationGrade5
      Education Grade 5
      7
    
    
      484
      http://hadatac.org/ont/chear#EducationGrade6
      Education Grade 6
      7
    
    
      485
      http://hadatac.org/ont/chear#EducationGrade7
      Education Grade 7
      7
    
    
      486
      http://hadatac.org/ont/chear#ElementarySchool
      Elementary School
      7
    
    
      487
      http://hadatac.org/ont/chear#NormalWeight
      Normal Weight
      7
    
    
      488
      http://hadatac.org/ont/chear#Pregnancy
      Pregnancy
      7
    
    
      489
      http://hadatac.org/ont/chear#TechnicalPostPrim...
      Technical Post Primary School
      7
    
    
      490
      http://hadatac.org/ont/chear#TechnicalPostMidd...
      Technical Post-Middle School
      7
    
    
      491
      http://hadatac.org/ont/chear#Child
      Child
      8
    
    
      492
      http://hadatac.org/ont/chear#EducationGrade4
      Education Grade 4
      8
    
    
      493
      http://hadatac.org/ont/chear#HeadOfHousehold
      Head Of Household
      8
    
    
      494
      http://hadatac.org/ont/chear#Parent
      Parent
      8
    
    
      495
      http://hadatac.org/ont/chear#UPLCMSMS
      Ultra-Performance Liquid Chromatography - Tand...
      8
    
    
      496
      http://hadatac.org/ont/chear#HPLCMSMS
      High Performance Liquid Chromatography - Tande...
      9
    
    
      497
      http://hadatac.org/ont/chear#QuitAfterPregnancy
      Quit Smoking After Pregnancy
      9
    
    
      498
      http://hadatac.org/ont/chear#QuitBeforePregnancy
      Quit Smoking Before Pregnancy
      9
    
    
      499
      http://hadatac.org/ont/chear#Daughter
      Daughter
      10
    
    
      500
      http://hadatac.org/ont/chear#Father
      Father
      10
    
    
      501
      http://hadatac.org/ont/chear#Mother
      Mother
      10
    
    
      502
      http://hadatac.org/ont/chear#Son
      Son
      10
    
  

503 rows × 3 columns



In [24]:

    
chear_mappings['numeric_uri'] = ['hhear:%05d' % (i+1) for  i in chear_mappings.index]
chear_mappings['label_uri'] = [x.replace('http://hadatac.org/ont/chear#','chear:')
                               for x in chear_mappings['class']]



In [25]:

    
chear_mappings









    Out[25]:







  
    
      
      class
      label
      depth
      numeric_uri
      label_uri
    
  
  
    
      0
      http://hadatac.org/ont/chear#PHEN2PHEN3
      2-hydroxyphenanthrene + 3-hydroxyphenanthrene
      0
      hhear:00001
      chear:PHEN2PHEN3
    
    
      1
      http://hadatac.org/ont/chear#MCOCH
      Cyclohexane-1,2-dicarboxylic acid mono carboxy...
      0
      hhear:00002
      chear:MCOCH
    
    
      2
      http://hadatac.org/ont/chear#MHNCH
      Cyclohexane-1,2-dicarboxylic acid mono hydroxy...
      0
      hhear:00003
      chear:MHNCH
    
    
      3
      http://hadatac.org/ont/chear#homa_ir_unit
      HOMA-IR
      0
      hhear:00004
      chear:homa_ir_unit
    
    
      4
      http://hadatac.org/ont/chear#MEOHTP
      Mono-2-ethyl-5-oxohexylterephthalate
      0
      hhear:00005
      chear:MEOHTP
    
    
      5
      http://hadatac.org/ont/chear#PHET
      Phenanthrene tetrol
      0
      hhear:00006
      chear:PHET
    
    
      6
      http://hadatac.org/ont/chear#billion_parts_per...
      billion parts per microgram
      0
      hhear:00007
      chear:billion_parts_per_microgram
    
    
      7
      http://hadatac.org/ont/chear#international_uni...
      international units per litre
      0
      hhear:00008
      chear:international_units_per_litre
    
    
      8
      http://hadatac.org/ont/chear#micrograms_per_gram
      microgram per gram
      0
      hhear:00009
      chear:micrograms_per_gram
    
    
      9
      http://hadatac.org/ont/chear#micrograms_per_de...
      micrograms per deciliter
      0
      hhear:00010
      chear:micrograms_per_deciliter
    
    
      10
      http://hadatac.org/ont/chear#micrograms_per_me...
      micrograms per meter cubed
      0
      hhear:00011
      chear:micrograms_per_meter_cubed
    
    
      11
      http://hadatac.org/ont/chear#microunits_per_mi...
      microunits per milliliter
      0
      hhear:00012
      chear:microunits_per_milliliter
    
    
      12
      http://hadatac.org/ont/chear#milligram_per_gram
      milligram per gram
      0
      hhear:00013
      chear:milligram_per_gram
    
    
      13
      http://hadatac.org/ont/chear#millimole_per_liter
      millimole per liter
      0
      hhear:00014
      chear:millimole_per_liter
    
    
      14
      http://hadatac.org/ont/chear#million_parts_per...
      million parts per microgram
      0
      hhear:00015
      chear:million_parts_per_microgram
    
    
      15
      http://hadatac.org/ont/chear#MECPTP
      mono-2-ethyl-5- carboxypentyl terephthalate (D...
      0
      hhear:00016
      chear:MECPTP
    
    
      16
      http://hadatac.org/ont/chear#MEHHTP
      mono-2-ethyl-5-hydroxyhexyl terephthalate (DEHTP)
      0
      hhear:00017
      chear:MEHHTP
    
    
      17
      http://hadatac.org/ont/chear#MONP
      monooxoisononyl phthalate (DiNP)
      0
      hhear:00018
      chear:MONP
    
    
      18
      http://hadatac.org/ont/chear#parasites_per_mic...
      parasites per microgram
      0
      hhear:00019
      chear:parasites_per_microgram
    
    
      19
      http://hadatac.org/ont/chear#picomoles_per_mil...
      picomoles per milliliter
      0
      hhear:00020
      chear:picomoles_per_milliliter
    
    
      20
      http://hadatac.org/ont/chear#thousand_parts_pe...
      thousand parts per microgram
      0
      hhear:00021
      chear:thousand_parts_per_microgram
    
    
      21
      http://hadatac.org/ont/chear#SamplePairing
      A Sample has a Pairing
      1
      hhear:00022
      chear:SamplePairing
    
    
      22
      http://hadatac.org/ont/chear#Comment_90
      Abnormal hemoglobin variant observed
      1
      hhear:00023
      chear:Comment_90
    
    
      23
      http://hadatac.org/ont/chear#Acculturation
      Acculturation
      1
      hhear:00024
      chear:Acculturation
    
    
      24
      http://hadatac.org/ont/chear#ATIDU
      Alcohol, Tobacco, and Illicit Drug Use
      1
      hhear:00025
      chear:ATIDU
    
    
      25
      http://hadatac.org/ont/chear#AnalysisMode
      Analysis Mode
      1
      hhear:00026
      chear:AnalysisMode
    
    
      26
      http://hadatac.org/ont/chear#Analyte
      Analyte
      1
      hhear:00027
      chear:Analyte
    
    
      27
      http://hadatac.org/ont/chear#Comment_38
      Analyzed at a later date than rest of samples ...
      1
      hhear:00028
      chear:Comment_38
    
    
      28
      http://hadatac.org/ont/chear#Anthropometry
      Anthropometry
      1
      hhear:00029
      chear:Anthropometry
    
    
      29
      http://hadatac.org/ont/chear#AFSInstrument
      Atomic Fluorescence Spectroscopy Instrument
      1
      hhear:00030
      chear:AFSInstrument
    
    
      ...
      ...
      ...
      ...
      ...
      ...
    
    
      473
      http://hadatac.org/ont/chear#SomeElementarySchool
      Some Elementary School
      6
      hhear:00474
      chear:SomeElementarySchool
    
    
      474
      http://hadatac.org/ont/chear#SomeHighSchool
      Some High School
      6
      hhear:00475
      chear:SomeHighSchool
    
    
      475
      http://hadatac.org/ont/chear#SomeMiddleSchool
      Some Middle School
      6
      hhear:00476
      chear:SomeMiddleSchool
    
    
      476
      http://hadatac.org/ont/chear#Step
      Step
      6
      hhear:00477
      chear:Step
    
    
      477
      http://hadatac.org/ont/chear#TechnicalPostJuni...
      Technical Post Junior College
      6
      hhear:00478
      chear:TechnicalPostJuniorCollege
    
    
      478
      http://hadatac.org/ont/chear#UPLCMS
      Ultra Performance Liquid Chromatography - Mass...
      6
      hhear:00479
      chear:UPLCMS
    
    
      479
      http://hadatac.org/ont/chear#Conception
      Conception
      7
      hhear:00480
      chear:Conception
    
    
      480
      http://hadatac.org/ont/chear#EducationGrade1
      Education Grade 1
      7
      hhear:00481
      chear:EducationGrade1
    
    
      481
      http://hadatac.org/ont/chear#EducationGrade2
      Education Grade 2
      7
      hhear:00482
      chear:EducationGrade2
    
    
      482
      http://hadatac.org/ont/chear#EducationGrade3
      Education Grade 3
      7
      hhear:00483
      chear:EducationGrade3
    
    
      483
      http://hadatac.org/ont/chear#EducationGrade5
      Education Grade 5
      7
      hhear:00484
      chear:EducationGrade5
    
    
      484
      http://hadatac.org/ont/chear#EducationGrade6
      Education Grade 6
      7
      hhear:00485
      chear:EducationGrade6
    
    
      485
      http://hadatac.org/ont/chear#EducationGrade7
      Education Grade 7
      7
      hhear:00486
      chear:EducationGrade7
    
    
      486
      http://hadatac.org/ont/chear#ElementarySchool
      Elementary School
      7
      hhear:00487
      chear:ElementarySchool
    
    
      487
      http://hadatac.org/ont/chear#NormalWeight
      Normal Weight
      7
      hhear:00488
      chear:NormalWeight
    
    
      488
      http://hadatac.org/ont/chear#Pregnancy
      Pregnancy
      7
      hhear:00489
      chear:Pregnancy
    
    
      489
      http://hadatac.org/ont/chear#TechnicalPostPrim...
      Technical Post Primary School
      7
      hhear:00490
      chear:TechnicalPostPrimarySchool
    
    
      490
      http://hadatac.org/ont/chear#TechnicalPostMidd...
      Technical Post-Middle School
      7
      hhear:00491
      chear:TechnicalPostMiddleSchool
    
    
      491
      http://hadatac.org/ont/chear#Child
      Child
      8
      hhear:00492
      chear:Child
    
    
      492
      http://hadatac.org/ont/chear#EducationGrade4
      Education Grade 4
      8
      hhear:00493
      chear:EducationGrade4
    
    
      493
      http://hadatac.org/ont/chear#HeadOfHousehold
      Head Of Household
      8
      hhear:00494
      chear:HeadOfHousehold
    
    
      494
      http://hadatac.org/ont/chear#Parent
      Parent
      8
      hhear:00495
      chear:Parent
    
    
      495
      http://hadatac.org/ont/chear#UPLCMSMS
      Ultra-Performance Liquid Chromatography - Tand...
      8
      hhear:00496
      chear:UPLCMSMS
    
    
      496
      http://hadatac.org/ont/chear#HPLCMSMS
      High Performance Liquid Chromatography - Tande...
      9
      hhear:00497
      chear:HPLCMSMS
    
    
      497
      http://hadatac.org/ont/chear#QuitAfterPregnancy
      Quit Smoking After Pregnancy
      9
      hhear:00498
      chear:QuitAfterPregnancy
    
    
      498
      http://hadatac.org/ont/chear#QuitBeforePregnancy
      Quit Smoking Before Pregnancy
      9
      hhear:00499
      chear:QuitBeforePregnancy
    
    
      499
      http://hadatac.org/ont/chear#Daughter
      Daughter
      10
      hhear:00500
      chear:Daughter
    
    
      500
      http://hadatac.org/ont/chear#Father
      Father
      10
      hhear:00501
      chear:Father
    
    
      501
      http://hadatac.org/ont/chear#Mother
      Mother
      10
      hhear:00502
      chear:Mother
    
    
      502
      http://hadatac.org/ont/chear#Son
      Son
      10
      hhear:00503
      chear:Son
    
  

503 rows × 5 columns



In [27]:

    
sio_mappings.to_csv('sio_mappings.csv')
chear_mappings.to_csv('chear2hhear_mappings.csv')



In [ ]:

	class	label
0	http://semanticscience.org/resource/SIO_001025	prognosis
1	http://semanticscience.org/resource/SIO_000999	procedure
2	http://semanticscience.org/resource/SIO_000165	thesis document
3	http://semanticscience.org/resource/SIO_011105	protactinium atom
4	http://semanticscience.org/resource/SIO_001349	gene-disease association linked with chromosom...
5	http://semanticscience.org/resource/SIO_000783	spatial boundary
6	http://semanticscience.org/resource/SIO_000170	diary
7	http://semanticscience.org/resource/SIO_000017	function
8	http://semanticscience.org/resource/SIO_001071	text span start position
9	http://semanticscience.org/resource/SIO_010432	ligand
10	http://semanticscience.org/resource/SIO_000519	bar
11	http://semanticscience.org/resource/SIO_000921	dependent variable
12	http://semanticscience.org/resource/SIO_010309	catabolism
13	http://semanticscience.org/resource/SIO_001054	measuring
14	http://semanticscience.org/resource/SIO_001294	very poor quality
15	http://semanticscience.org/resource/SIO_011078	bohrium atom
16	http://semanticscience.org/resource/SIO_001144	maintenance of frequency of process
17	http://semanticscience.org/resource/SIO_001191	SOAP web service
18	http://semanticscience.org/resource/SIO_001295	poor quality
19	http://semanticscience.org/resource/SIO_010283	chemical transport
20	http://semanticscience.org/resource/SIO_011070	astatine atom
21	http://semanticscience.org/resource/SIO_010379	virus
22	http://semanticscience.org/resource/SIO_001125	regulation of transcription
23	http://semanticscience.org/resource/SIO_000104	language
24	http://semanticscience.org/resource/SIO_011044	rhodium atom
25	http://semanticscience.org/resource/SIO_000907	heatmap
26	http://semanticscience.org/resource/SIO_000593	interacting
27	http://semanticscience.org/resource/SIO_001009	toxic
28	http://semanticscience.org/resource/SIO_000038	1D extent quantity
29	http://semanticscience.org/resource/SIO_010517	isomerization reaction
...	...	...
1514	http://semanticscience.org/resource/SIO_000876	student advisor role
1515	http://semanticscience.org/resource/SIO_001393	post-translational modification
1516	http://semanticscience.org/resource/SIO_000613	ordinal position
1517	http://semanticscience.org/resource/SIO_000986	functional rna coding gene
1518	http://semanticscience.org/resource/SIO_011018	potassium atom
1519	http://semanticscience.org/resource/SIO_000868	sorrow
1520	http://semanticscience.org/resource/SIO_001293	quality descriptor
1521	http://semanticscience.org/resource/SIO_010525	biochemical pathway
1522	http://semanticscience.org/resource/SIO_001335	node
1523	http://semanticscience.org/resource/SIO_000542	to serve as
1524	http://semanticscience.org/resource/SIO_000115	identifier
1525	http://semanticscience.org/resource/SIO_001308	satisfaction qualifier
1526	http://semanticscience.org/resource/SIO_011051	tellurium atom
1527	http://semanticscience.org/resource/SIO_000333	3D cartesian coordinate
1528	http://semanticscience.org/resource/SIO_000308	edition number
1529	http://semanticscience.org/resource/SIO_010288	biochemical activation
1530	http://semanticscience.org/resource/SIO_000590	biosynthesis
1531	http://semanticscience.org/resource/SIO_000166	honor's thesis
1532	http://semanticscience.org/resource/SIO_000753	column
1533	http://semanticscience.org/resource/SIO_000600	structure
1534	http://semanticscience.org/resource/SIO_010023	tertiary structure descriptor
1535	http://semanticscience.org/resource/SIO_000852	loneliness
1536	http://semanticscience.org/resource/SIO_001029	peer reviewed article
1537	http://semanticscience.org/resource/SIO_000848	interest
1538	http://semanticscience.org/resource/SIO_000111	document section
1539	http://semanticscience.org/resource/SIO_010778	optical isomer
1540	http://semanticscience.org/resource/SIO_001370	slide
1541	http://semanticscience.org/resource/SIO_010096	mature mRNA
1542	http://semanticscience.org/resource/SIO_001380	protein family
1543	http://semanticscience.org/resource/SIO_001245	standard score

	class	label	numeric_uri	label_uri
0	http://semanticscience.org/resource/SIO_001025	prognosis	sio:SIO_001025	sio:Prognosis
1	http://semanticscience.org/resource/SIO_000999	procedure	sio:SIO_000999	sio:Procedure
2	http://semanticscience.org/resource/SIO_000165	thesis document	sio:SIO_000165	sio:ThesisDocument
3	http://semanticscience.org/resource/SIO_011105	protactinium atom	sio:SIO_011105	sio:ProtactiniumAtom
4	http://semanticscience.org/resource/SIO_001349	gene-disease association linked with chromosom...	sio:SIO_001349	sio:Gene-diseaseAssociationLinkedWithChromosom...
5	http://semanticscience.org/resource/SIO_000783	spatial boundary	sio:SIO_000783	sio:SpatialBoundary
6	http://semanticscience.org/resource/SIO_000170	diary	sio:SIO_000170	sio:Diary
7	http://semanticscience.org/resource/SIO_000017	function	sio:SIO_000017	sio:Function
8	http://semanticscience.org/resource/SIO_001071	text span start position	sio:SIO_001071	sio:TextSpanStartPosition
9	http://semanticscience.org/resource/SIO_010432	ligand	sio:SIO_010432	sio:Ligand
10	http://semanticscience.org/resource/SIO_000519	bar	sio:SIO_000519	sio:Bar
11	http://semanticscience.org/resource/SIO_000921	dependent variable	sio:SIO_000921	sio:DependentVariable
12	http://semanticscience.org/resource/SIO_010309	catabolism	sio:SIO_010309	sio:Catabolism
13	http://semanticscience.org/resource/SIO_001054	measuring	sio:SIO_001054	sio:Measuring
14	http://semanticscience.org/resource/SIO_001294	very poor quality	sio:SIO_001294	sio:VeryPoorQuality
15	http://semanticscience.org/resource/SIO_011078	bohrium atom	sio:SIO_011078	sio:BohriumAtom
16	http://semanticscience.org/resource/SIO_001144	maintenance of frequency of process	sio:SIO_001144	sio:MaintenanceOfFrequencyOfProcess
17	http://semanticscience.org/resource/SIO_001191	SOAP web service	sio:SIO_001191	sio:SOAPWebService
18	http://semanticscience.org/resource/SIO_001295	poor quality	sio:SIO_001295	sio:PoorQuality
19	http://semanticscience.org/resource/SIO_010283	chemical transport	sio:SIO_010283	sio:ChemicalTransport
20	http://semanticscience.org/resource/SIO_011070	astatine atom	sio:SIO_011070	sio:AstatineAtom
21	http://semanticscience.org/resource/SIO_010379	virus	sio:SIO_010379	sio:Virus
22	http://semanticscience.org/resource/SIO_001125	regulation of transcription	sio:SIO_001125	sio:RegulationOfTranscription
23	http://semanticscience.org/resource/SIO_000104	language	sio:SIO_000104	sio:Language
24	http://semanticscience.org/resource/SIO_011044	rhodium atom	sio:SIO_011044	sio:RhodiumAtom
25	http://semanticscience.org/resource/SIO_000907	heatmap	sio:SIO_000907	sio:Heatmap
26	http://semanticscience.org/resource/SIO_000593	interacting	sio:SIO_000593	sio:Interacting
27	http://semanticscience.org/resource/SIO_001009	toxic	sio:SIO_001009	sio:Toxic
28	http://semanticscience.org/resource/SIO_000038	1D extent quantity	sio:SIO_000038	sio:1DExtentQuantity
29	http://semanticscience.org/resource/SIO_010517	isomerization reaction	sio:SIO_010517	sio:IsomerizationReaction
...	...	...	...	...
1514	http://semanticscience.org/resource/SIO_000876	student advisor role	sio:SIO_000876	sio:StudentAdvisorRole
1515	http://semanticscience.org/resource/SIO_001393	post-translational modification	sio:SIO_001393	sio:Post-translationalModification
1516	http://semanticscience.org/resource/SIO_000613	ordinal position	sio:SIO_000613	sio:OrdinalPosition
1517	http://semanticscience.org/resource/SIO_000986	functional rna coding gene	sio:SIO_000986	sio:FunctionalRnaCodingGene
1518	http://semanticscience.org/resource/SIO_011018	potassium atom	sio:SIO_011018	sio:PotassiumAtom
1519	http://semanticscience.org/resource/SIO_000868	sorrow	sio:SIO_000868	sio:Sorrow
1520	http://semanticscience.org/resource/SIO_001293	quality descriptor	sio:SIO_001293	sio:QualityDescriptor
1521	http://semanticscience.org/resource/SIO_010525	biochemical pathway	sio:SIO_010525	sio:BiochemicalPathway
1522	http://semanticscience.org/resource/SIO_001335	node	sio:SIO_001335	sio:Node
1523	http://semanticscience.org/resource/SIO_000542	to serve as	sio:SIO_000542	sio:ToServeAs
1524	http://semanticscience.org/resource/SIO_000115	identifier	sio:SIO_000115	sio:Identifier
1525	http://semanticscience.org/resource/SIO_001308	satisfaction qualifier	sio:SIO_001308	sio:SatisfactionQualifier
1526	http://semanticscience.org/resource/SIO_011051	tellurium atom	sio:SIO_011051	sio:TelluriumAtom
1527	http://semanticscience.org/resource/SIO_000333	3D cartesian coordinate	sio:SIO_000333	sio:3DCartesianCoordinate
1528	http://semanticscience.org/resource/SIO_000308	edition number	sio:SIO_000308	sio:EditionNumber
1529	http://semanticscience.org/resource/SIO_010288	biochemical activation	sio:SIO_010288	sio:BiochemicalActivation
1530	http://semanticscience.org/resource/SIO_000590	biosynthesis	sio:SIO_000590	sio:Biosynthesis
1531	http://semanticscience.org/resource/SIO_000166	honor's thesis	sio:SIO_000166	sio:Honor'sThesis
1532	http://semanticscience.org/resource/SIO_000753	column	sio:SIO_000753	sio:Column
1533	http://semanticscience.org/resource/SIO_000600	structure	sio:SIO_000600	sio:Structure
1534	http://semanticscience.org/resource/SIO_010023	tertiary structure descriptor	sio:SIO_010023	sio:TertiaryStructureDescriptor
1535	http://semanticscience.org/resource/SIO_000852	loneliness	sio:SIO_000852	sio:Loneliness
1536	http://semanticscience.org/resource/SIO_001029	peer reviewed article	sio:SIO_001029	sio:PeerReviewedArticle
1537	http://semanticscience.org/resource/SIO_000848	interest	sio:SIO_000848	sio:Interest
1538	http://semanticscience.org/resource/SIO_000111	document section	sio:SIO_000111	sio:DocumentSection
1539	http://semanticscience.org/resource/SIO_010778	optical isomer	sio:SIO_010778	sio:OpticalIsomer
1540	http://semanticscience.org/resource/SIO_001370	slide	sio:SIO_001370	sio:Slide
1541	http://semanticscience.org/resource/SIO_010096	mature mRNA	sio:SIO_010096	sio:MatureMrna
1542	http://semanticscience.org/resource/SIO_001380	protein family	sio:SIO_001380	sio:ProteinFamily
1543	http://semanticscience.org/resource/SIO_001245	standard score	sio:SIO_001245	sio:StandardScore

	class	label	depth
0	http://hadatac.org/ont/chear#PHEN2PHEN3	2-hydroxyphenanthrene + 3-hydroxyphenanthrene	0
1	http://hadatac.org/ont/chear#MCOCH	Cyclohexane-1,2-dicarboxylic acid mono carboxy...	0
2	http://hadatac.org/ont/chear#MHNCH	Cyclohexane-1,2-dicarboxylic acid mono hydroxy...	0
3	http://hadatac.org/ont/chear#homa_ir_unit	HOMA-IR	0
4	http://hadatac.org/ont/chear#MEOHTP	Mono-2-ethyl-5-oxohexylterephthalate	0
5	http://hadatac.org/ont/chear#PHET	Phenanthrene tetrol	0
6	http://hadatac.org/ont/chear#billion_parts_per...	billion parts per microgram	0
7	http://hadatac.org/ont/chear#international_uni...	international units per litre	0
8	http://hadatac.org/ont/chear#micrograms_per_gram	microgram per gram	0
9	http://hadatac.org/ont/chear#micrograms_per_de...	micrograms per deciliter	0
10	http://hadatac.org/ont/chear#micrograms_per_me...	micrograms per meter cubed	0
11	http://hadatac.org/ont/chear#microunits_per_mi...	microunits per milliliter	0
12	http://hadatac.org/ont/chear#milligram_per_gram	milligram per gram	0
13	http://hadatac.org/ont/chear#millimole_per_liter	millimole per liter	0
14	http://hadatac.org/ont/chear#million_parts_per...	million parts per microgram	0
15	http://hadatac.org/ont/chear#MECPTP	mono-2-ethyl-5- carboxypentyl terephthalate (D...	0
16	http://hadatac.org/ont/chear#MEHHTP	mono-2-ethyl-5-hydroxyhexyl terephthalate (DEHTP)	0
17	http://hadatac.org/ont/chear#MONP	monooxoisononyl phthalate (DiNP)	0
18	http://hadatac.org/ont/chear#parasites_per_mic...	parasites per microgram	0
19	http://hadatac.org/ont/chear#picomoles_per_mil...	picomoles per milliliter	0
20	http://hadatac.org/ont/chear#thousand_parts_pe...	thousand parts per microgram	0
21	http://hadatac.org/ont/chear#SamplePairing	A Sample has a Pairing	1
22	http://hadatac.org/ont/chear#Comment_90	Abnormal hemoglobin variant observed	1
23	http://hadatac.org/ont/chear#Acculturation	Acculturation	1
24	http://hadatac.org/ont/chear#ATIDU	Alcohol, Tobacco, and Illicit Drug Use	1
25	http://hadatac.org/ont/chear#AnalysisMode	Analysis Mode	1
26	http://hadatac.org/ont/chear#Analyte	Analyte	1
27	http://hadatac.org/ont/chear#Comment_38	Analyzed at a later date than rest of samples ...	1
28	http://hadatac.org/ont/chear#Anthropometry	Anthropometry	1
29	http://hadatac.org/ont/chear#AFSInstrument	Atomic Fluorescence Spectroscopy Instrument	1
...	...	...	...
473	http://hadatac.org/ont/chear#SomeElementarySchool	Some Elementary School	6
474	http://hadatac.org/ont/chear#SomeHighSchool	Some High School	6
475	http://hadatac.org/ont/chear#SomeMiddleSchool	Some Middle School	6
476	http://hadatac.org/ont/chear#Step	Step	6
477	http://hadatac.org/ont/chear#TechnicalPostJuni...	Technical Post Junior College	6
478	http://hadatac.org/ont/chear#UPLCMS	Ultra Performance Liquid Chromatography - Mass...	6
479	http://hadatac.org/ont/chear#Conception	Conception	7
480	http://hadatac.org/ont/chear#EducationGrade1	Education Grade 1	7
481	http://hadatac.org/ont/chear#EducationGrade2	Education Grade 2	7
482	http://hadatac.org/ont/chear#EducationGrade3	Education Grade 3	7
483	http://hadatac.org/ont/chear#EducationGrade5	Education Grade 5	7
484	http://hadatac.org/ont/chear#EducationGrade6	Education Grade 6	7
485	http://hadatac.org/ont/chear#EducationGrade7	Education Grade 7	7
486	http://hadatac.org/ont/chear#ElementarySchool	Elementary School	7
487	http://hadatac.org/ont/chear#NormalWeight	Normal Weight	7
488	http://hadatac.org/ont/chear#Pregnancy	Pregnancy	7
489	http://hadatac.org/ont/chear#TechnicalPostPrim...	Technical Post Primary School	7
490	http://hadatac.org/ont/chear#TechnicalPostMidd...	Technical Post-Middle School	7
491	http://hadatac.org/ont/chear#Child	Child	8
492	http://hadatac.org/ont/chear#EducationGrade4	Education Grade 4	8
493	http://hadatac.org/ont/chear#HeadOfHousehold	Head Of Household	8
494	http://hadatac.org/ont/chear#Parent	Parent	8
495	http://hadatac.org/ont/chear#UPLCMSMS	Ultra-Performance Liquid Chromatography - Tand...	8
496	http://hadatac.org/ont/chear#HPLCMSMS	High Performance Liquid Chromatography - Tande...	9
497	http://hadatac.org/ont/chear#QuitAfterPregnancy	Quit Smoking After Pregnancy	9
498	http://hadatac.org/ont/chear#QuitBeforePregnancy	Quit Smoking Before Pregnancy	9
499	http://hadatac.org/ont/chear#Daughter	Daughter	10
500	http://hadatac.org/ont/chear#Father	Father	10
501	http://hadatac.org/ont/chear#Mother	Mother	10
502	http://hadatac.org/ont/chear#Son	Son	10

	class	label	depth	numeric_uri	label_uri
0	http://hadatac.org/ont/chear#PHEN2PHEN3	2-hydroxyphenanthrene + 3-hydroxyphenanthrene	0	hhear:00001	chear:PHEN2PHEN3
1	http://hadatac.org/ont/chear#MCOCH	Cyclohexane-1,2-dicarboxylic acid mono carboxy...	0	hhear:00002	chear:MCOCH
2	http://hadatac.org/ont/chear#MHNCH	Cyclohexane-1,2-dicarboxylic acid mono hydroxy...	0	hhear:00003	chear:MHNCH
3	http://hadatac.org/ont/chear#homa_ir_unit	HOMA-IR	0	hhear:00004	chear:homa_ir_unit
4	http://hadatac.org/ont/chear#MEOHTP	Mono-2-ethyl-5-oxohexylterephthalate	0	hhear:00005	chear:MEOHTP
5	http://hadatac.org/ont/chear#PHET	Phenanthrene tetrol	0	hhear:00006	chear:PHET
6	http://hadatac.org/ont/chear#billion_parts_per...	billion parts per microgram	0	hhear:00007	chear:billion_parts_per_microgram
7	http://hadatac.org/ont/chear#international_uni...	international units per litre	0	hhear:00008	chear:international_units_per_litre
8	http://hadatac.org/ont/chear#micrograms_per_gram	microgram per gram	0	hhear:00009	chear:micrograms_per_gram
9	http://hadatac.org/ont/chear#micrograms_per_de...	micrograms per deciliter	0	hhear:00010	chear:micrograms_per_deciliter
10	http://hadatac.org/ont/chear#micrograms_per_me...	micrograms per meter cubed	0	hhear:00011	chear:micrograms_per_meter_cubed
11	http://hadatac.org/ont/chear#microunits_per_mi...	microunits per milliliter	0	hhear:00012	chear:microunits_per_milliliter
12	http://hadatac.org/ont/chear#milligram_per_gram	milligram per gram	0	hhear:00013	chear:milligram_per_gram
13	http://hadatac.org/ont/chear#millimole_per_liter	millimole per liter	0	hhear:00014	chear:millimole_per_liter
14	http://hadatac.org/ont/chear#million_parts_per...	million parts per microgram	0	hhear:00015	chear:million_parts_per_microgram
15	http://hadatac.org/ont/chear#MECPTP	mono-2-ethyl-5- carboxypentyl terephthalate (D...	0	hhear:00016	chear:MECPTP
16	http://hadatac.org/ont/chear#MEHHTP	mono-2-ethyl-5-hydroxyhexyl terephthalate (DEHTP)	0	hhear:00017	chear:MEHHTP
17	http://hadatac.org/ont/chear#MONP	monooxoisononyl phthalate (DiNP)	0	hhear:00018	chear:MONP
18	http://hadatac.org/ont/chear#parasites_per_mic...	parasites per microgram	0	hhear:00019	chear:parasites_per_microgram
19	http://hadatac.org/ont/chear#picomoles_per_mil...	picomoles per milliliter	0	hhear:00020	chear:picomoles_per_milliliter
20	http://hadatac.org/ont/chear#thousand_parts_pe...	thousand parts per microgram	0	hhear:00021	chear:thousand_parts_per_microgram
21	http://hadatac.org/ont/chear#SamplePairing	A Sample has a Pairing	1	hhear:00022	chear:SamplePairing
22	http://hadatac.org/ont/chear#Comment_90	Abnormal hemoglobin variant observed	1	hhear:00023	chear:Comment_90
23	http://hadatac.org/ont/chear#Acculturation	Acculturation	1	hhear:00024	chear:Acculturation
24	http://hadatac.org/ont/chear#ATIDU	Alcohol, Tobacco, and Illicit Drug Use	1	hhear:00025	chear:ATIDU
25	http://hadatac.org/ont/chear#AnalysisMode	Analysis Mode	1	hhear:00026	chear:AnalysisMode
26	http://hadatac.org/ont/chear#Analyte	Analyte	1	hhear:00027	chear:Analyte
27	http://hadatac.org/ont/chear#Comment_38	Analyzed at a later date than rest of samples ...	1	hhear:00028	chear:Comment_38
28	http://hadatac.org/ont/chear#Anthropometry	Anthropometry	1	hhear:00029	chear:Anthropometry
29	http://hadatac.org/ont/chear#AFSInstrument	Atomic Fluorescence Spectroscopy Instrument	1	hhear:00030	chear:AFSInstrument
...	...	...	...	...	...
473	http://hadatac.org/ont/chear#SomeElementarySchool	Some Elementary School	6	hhear:00474	chear:SomeElementarySchool
474	http://hadatac.org/ont/chear#SomeHighSchool	Some High School	6	hhear:00475	chear:SomeHighSchool
475	http://hadatac.org/ont/chear#SomeMiddleSchool	Some Middle School	6	hhear:00476	chear:SomeMiddleSchool
476	http://hadatac.org/ont/chear#Step	Step	6	hhear:00477	chear:Step
477	http://hadatac.org/ont/chear#TechnicalPostJuni...	Technical Post Junior College	6	hhear:00478	chear:TechnicalPostJuniorCollege
478	http://hadatac.org/ont/chear#UPLCMS	Ultra Performance Liquid Chromatography - Mass...	6	hhear:00479	chear:UPLCMS
479	http://hadatac.org/ont/chear#Conception	Conception	7	hhear:00480	chear:Conception
480	http://hadatac.org/ont/chear#EducationGrade1	Education Grade 1	7	hhear:00481	chear:EducationGrade1
481	http://hadatac.org/ont/chear#EducationGrade2	Education Grade 2	7	hhear:00482	chear:EducationGrade2
482	http://hadatac.org/ont/chear#EducationGrade3	Education Grade 3	7	hhear:00483	chear:EducationGrade3
483	http://hadatac.org/ont/chear#EducationGrade5	Education Grade 5	7	hhear:00484	chear:EducationGrade5
484	http://hadatac.org/ont/chear#EducationGrade6	Education Grade 6	7	hhear:00485	chear:EducationGrade6
485	http://hadatac.org/ont/chear#EducationGrade7	Education Grade 7	7	hhear:00486	chear:EducationGrade7
486	http://hadatac.org/ont/chear#ElementarySchool	Elementary School	7	hhear:00487	chear:ElementarySchool
487	http://hadatac.org/ont/chear#NormalWeight	Normal Weight	7	hhear:00488	chear:NormalWeight
488	http://hadatac.org/ont/chear#Pregnancy	Pregnancy	7	hhear:00489	chear:Pregnancy
489	http://hadatac.org/ont/chear#TechnicalPostPrim...	Technical Post Primary School	7	hhear:00490	chear:TechnicalPostPrimarySchool
490	http://hadatac.org/ont/chear#TechnicalPostMidd...	Technical Post-Middle School	7	hhear:00491	chear:TechnicalPostMiddleSchool
491	http://hadatac.org/ont/chear#Child	Child	8	hhear:00492	chear:Child
492	http://hadatac.org/ont/chear#EducationGrade4	Education Grade 4	8	hhear:00493	chear:EducationGrade4
493	http://hadatac.org/ont/chear#HeadOfHousehold	Head Of Household	8	hhear:00494	chear:HeadOfHousehold
494	http://hadatac.org/ont/chear#Parent	Parent	8	hhear:00495	chear:Parent
495	http://hadatac.org/ont/chear#UPLCMSMS	Ultra-Performance Liquid Chromatography - Tand...	8	hhear:00496	chear:UPLCMSMS
496	http://hadatac.org/ont/chear#HPLCMSMS	High Performance Liquid Chromatography - Tande...	9	hhear:00497	chear:HPLCMSMS
497	http://hadatac.org/ont/chear#QuitAfterPregnancy	Quit Smoking After Pregnancy	9	hhear:00498	chear:QuitAfterPregnancy
498	http://hadatac.org/ont/chear#QuitBeforePregnancy	Quit Smoking Before Pregnancy	9	hhear:00499	chear:QuitBeforePregnancy
499	http://hadatac.org/ont/chear#Daughter	Daughter	10	hhear:00500	chear:Daughter
500	http://hadatac.org/ont/chear#Father	Father	10	hhear:00501	chear:Father
501	http://hadatac.org/ont/chear#Mother	Mother	10	hhear:00502	chear:Mother
502	http://hadatac.org/ont/chear#Son	Son	10	hhear:00503	chear:Son