In [1]:
# Python version
import sys
print('Python: {}'.format(sys.version))
# scipy
import scipy
print('scipy: {}'.format(scipy.__version__))
# numpy
import numpy
print('numpy: {}'.format(numpy.__version__))
# matplotlib
import matplotlib
print('matplotlib: {}'.format(matplotlib.__version__))
# pandas
import pandas
print('pandas: {}'.format(pandas.__version__))
# scikit-learn
import sklearn
print('sklearn: {}'.format(sklearn.__version__))
# In addition to the online example, these packages below help dealinf with the file system
import glob
import os
from PIL import Image
Python: 3.6.1 |Anaconda custom (64-bit)| (default, May 11 2017, 13:25:24) [MSC v.1900 64 bit (AMD64)]
scipy: 0.19.1
numpy: 1.12.1
matplotlib: 2.0.2
pandas: 0.20.3
sklearn: 0.18.1
In [2]:
# Load libraries
import pandas
from pandas.tools.plotting import scatter_matrix
import matplotlib.pyplot as plt
from sklearn import model_selection
from sklearn.metrics import classification_report
from sklearn.metrics import confusion_matrix
from sklearn.metrics import accuracy_score
from sklearn.linear_model import LogisticRegression
from sklearn.tree import DecisionTreeClassifier
from sklearn.neighbors import KNeighborsClassifier
from sklearn.discriminant_analysis import LinearDiscriminantAnalysis
from sklearn.naive_bayes import GaussianNB
from sklearn.svm import SVC
from datetime import date
In [3]:
# Set the directory to parse, and the column names
#dir = r'C:/Users/AdamShelboourne/Uni/Physics/Astr310/Python/mu/daily/*'
dir = r'C:\Users\Adam Shelbourne\Uni\Physics\Astr310\Python\mu\daily\*'
#dir = r'C:\Users\Adam Shelbourne\Uni\Physics\Astr310\Python\sso\daily\*'
# Set the column names for the data
names = ['UTCDateTime', 'LocalDateTime', 'Temperature', 'Counts', 'Frequency', 'MSAS']
print(glob.glob(dir))
#print (glob.glob(dir2))
['C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160729_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160730_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160731_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160801_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160802_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160803_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160804_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160805_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160806_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160807_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160808_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160809_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160810_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160811_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160812_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160813_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160814_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160815_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160816_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160817_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160818_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160819_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160820_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160821_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160822_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160823_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20160824_120000_SQM_LE-mac_uni.dat', 'C:\\Users\\Adam 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'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170614_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170615_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170618_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170619_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170620_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170621_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170622_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170623_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170624_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170625_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170626_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170627_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170628_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170629_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170630_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170701_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170702_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170703_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170704_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170705_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170706_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170707_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170708_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170709_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170710_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170711_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170712_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170713_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170714_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170715_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170716_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170717_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170718_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170719_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170720_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170721_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170722_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170723_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170724_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170725_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170726_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170727_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170728_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170729_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170730_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170731_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170801_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170802_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170803_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170804_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170805_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170806_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170807_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170808_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170809_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170810_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170811_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170812_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170813_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170814_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170815_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170816_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170817_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170818_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170819_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\20170820_120000_SQM_LE_mqu-mac_uni.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\all_data.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\dates.dat', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\SQM.ipynb']
In [4]:
# Set the common time grid onto which each night is sampled. The common grid
# is defined by the start time defined below, and the number of hours from that time
beginh = 16 # Hour of start time (hour)
beginm = 30 # Hour of start time (minute)
nhrs = 15 # Number of hours to extend time grid
# Output file name for storing the big 2D array of resampled SQM values. Remove the file
# if it already exists.
outfile = dir + 'all_data.dat'
datesOutfile = dir + 'dates.dat'
os.remove(outfile) if os.path.exists(outfile) else None
os.remove(datesOutfile) if os.path.exists(datesOutfile) else None
print (glob.glob(outfile))
print (glob.glob(datesOutfile))
['C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\all_data.dat']
['C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\dates.dat']
In [5]:
# Open up files for the outputs. There is one for the SQM float values, and another for
# storing the data of each night. These are merged later, but couldn't easily see how to
# do this directly in one file, due to mixed data types.
outfile = r'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\all_data.dat'
dates = r'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\dates.dat'
f=open(outfile,'a+b')
f2=open(dates,'w')
# Parse the data directory and pick up all the relevant data file names. Note that the directory
# listing will set the order of the files. The default pysqm.py output files are dated, so this should
# be OK.
for name in glob.glob(dir+'20*.dat'):
# Read in the data set
dataset = pandas.read_csv(name,comment="#",sep=';',names=names)
#Establish Local Time as index
times = pandas.to_datetime(dataset['LocalDateTime'])
dataset.index=times
# Set up the common time span, but adapted for the current data's date
rng = pandas.date_range(pandas.to_datetime(dataset['LocalDateTime']).dt.date[0] + pandas.DateOffset(hours=beginh,minutes=beginm), periods=nhrs*60, freq='T')
# Set the new time grid as the index
d = {'Date' : pandas.Series(rng)}
df = pandas.DataFrame(d)
dates = pandas.to_datetime(df['Date'])
df.index = dates
# Resample the original data to minutes, spanning the common grid
start = dates.min().strftime('%H:%M:%S')
end = dates.max().strftime('%H:%M:%S')
sub = dataset.between_time(start_time=start,end_time=end,include_start=True,include_end=True).resample('T').mean().interpolate(method='linear')
# Combine data with this grid, thus putting it on the common frame
comb = df.join(sub['MSAS'])
# Save data as new line in output file
numpy.savetxt(f,[numpy.array(comb['MSAS'])[0:(nhrs*60)-1]])
f2.write(str(pandas.to_datetime(dataset['LocalDateTime']).dt.date[0])+'\n')
# Close the files
f.close()
f2.close()
In [12]:
dataset2 = pandas.read_table(outfile, delim_whitespace=True, header=None, skip_blank_lines=True)
#dataset2.shape
#dataset2[200:240].T.plot(alpha=0.5,legend=False)
#dataset2.T.plot(alpha=0.1,legend=False)
plt.rcParams['figure.figsize'] = (20, 16)
plt.imshow(dataset2,aspect='auto')
plt.suptitle('MQ SQM')
plt.xlabel('Minutes')
plt.ylabel('Days')
#plt.savefig(dir+'all.png')
plt.show()
#dataset2.plot.hexbin(gridsize=25)
In [21]:
# Read in the data set
# 20160729_120000_SQM_LE-mac_uni.dat
epoch = date(2016, 7, 29)
print(epoch)
today = date.today()
print(today)
deltaT = (today - epoch).days
print(deltaT)
#dataset = pandas.read_csv(name,comment="#",sep=';',names=names)
#Establish Local Time as index
#times = pandas.to_datetime(dataset['LocalDateTime'])
#dataset.index=times
MyData=zeros(100,22); %assume data has 100 rows
2016-07-29
2017-09-14
412
In [22]:
#files = r'C:\Users\Adam Shelbourne\Uni\Physics\Astr310\Python\mu\graph\*'
#print(glob.glob(files))
#nfiles = len(files)
['C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160729_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160730_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160731_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160801_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160802_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160803_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160804_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160805_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160806_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160807_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160808_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160809_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160810_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160811_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160812_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160813_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160814_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160815_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160816_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160817_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160818_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160819_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160820_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160821_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160822_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160823_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160824_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160825_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160826_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160827_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160828_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160829_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160830_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160831_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160901_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\graph\\20160902_120000_SQM_LE-mac_uni.png', 'C:\\Users\\Adam 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In [6]:
# Read the data file and dates file
dataset2 = pandas.read_table(r'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\all_data.dat', delim_whitespace=True, header=None, skip_blank_lines=True)
dates = pandas.read_table(r'C:\\Users\\Adam Shelbourne\\Uni\\Physics\\Astr310\\Python\\mu\\daily\\dates.dat', delim_whitespace=True, header=None, skip_blank_lines=True)
#Set up an epoch for the event, the first piece of sqm data
epoch = date(2016, 7, 29)
# Set up variables and plot size
dim = dataset2.shape
flag = []
plt.rcParams['figure.figsize'] = (5, 5)
# This is the loop where each night is plotted, with Y/N classification
for i in range(dim[0]):
dataset2.T[i].plot(alpha=0.9,legend=False)
plt.show()
In [ ]:
Content source: shelly1296/gravity1
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