notebook.community

Edit and run 





In [1]:



    


from __future__ import print_function, division



    











In [34]:



    


# This changes the current directory to the base saga directory - make sure to run this first!
# This is necessary to be able to import the py files and use the right directories,
# while keeping all the notebooks in their own directory.
import os
import sys
import time
import shutil

import urllib

if 'saga_base_dir' not in locals():
    saga_base_dir = os.path.abspath('..')
if saga_base_dir not in sys.path:
    os.chdir(saga_base_dir)



    











In [30]:



    


import hosts
import decals

import numpy as np

from astropy import units as u
from astropy.coordinates import SkyCoord, Angle
from astropy import table
from astropy.table import Table
from astropy.io import fits

import tqdm
from astropy.utils import data



    











In [4]:



    


%matplotlib inline
from matplotlib import style, pyplot as plt

plt.style.use('seaborn-deep')
plt.rcParams['image.cmap'] = 'viridis'
plt.rcParams['image.origin'] = 'lower'
plt.rcParams['figure.figsize'] = (14, 8)

Load the brick data





In [6]:



    


ls decals_dr3/



    


















    






anakbricks                     survey-bricks.fits.gz
catalogs/                      survey-ccds-decals.fits.gz
dr3-depth.fits.gz              survey-ccds-extra.fits.gz
in_sdss.npy                    survey-ccds-nondecals.fits.gz
survey-bricks-dr3.fits.gz

















In [7]:



    


ls decals_dr4/



    


















    






catalogs/                  survey-bricks-dr4.fits.gz
in_sdss.npy                survey-bricks.fits.gz

















In [8]:



    


bricks = Table.read('decals_dr4/survey-bricks.fits.gz')
bricksdr3 = Table.read('decals_dr3/survey-bricks-dr3.fits.gz')
bricksdr4 = Table.read('decals_dr4/survey-bricks-dr4.fits.gz')

SAGA hosts





In [9]:



    


paper1nsas_comp = [166313,147100,165536,61945,132339,149781,33446,150887]
paper1nsas_incomp = [161174,85746,145729,140594,126115,13927,137625,129237]
paper1nsas = paper1nsas_comp + paper1nsas_incomp



    











In [10]:



    


hostobjs = hosts.get_saga_hosts_from_google()
paperhosts = [h for h in hostobjs if h.nsaid in paper1nsas]
assert len(paperhosts) == len(paper1nsas)



    


















    






Using cached version of google hosts list from file "hosts_dl.pkl2"

















In [11]:



    


paperhostscs = SkyCoord([h.coords for h in paperhosts])



    











In [12]:



    


def find_host_bricks(hostlst, bricksdr, environfactor=1.2, brick_check_func=np.any):
    subbricks = bricks['BRICKNAME', 'RA1', 'RA2', 'DEC1', 'DEC2']
    subbricks.rename_column('BRICKNAME', 'brickname')
    joined = table.join(subbricks, bricksdr)
    
    schosts = SkyCoord([h.coords for h in hostlst])
    hostnames = np.array([h.name for h in hostlst])
    if hasattr(environfactor, 'unit'):
        environrad = [environfactor.value for h in hostlst]*environfactor.unit
    else:
        environrad = [environfactor*h.environsarcmin for h in hostlst]*u.arcmin

    # we do the ravel because match_to_catalog_sky works best with 1d
    brickras = np.array([joined['RA1'], joined['RA1'], joined['RA2'], joined['RA2']]).ravel()
    brickdecs = np.array([joined['DEC1'], joined['DEC2'], joined['DEC1'], joined['DEC2']]).ravel()
    brickedge_scs = SkyCoord(brickras, brickdecs, unit=u.deg)
    
    idx, d2d, _ = brickedge_scs.match_to_catalog_sky(schosts)
    # reshape so that each *brick* is represented
    bricksidx = idx.reshape(4, idx.size//4)
    bricksd2d = d2d.reshape(4, idx.size//4)
    
    bricksin = brick_check_func(bricksd2d < environrad[bricksidx], axis=0)
    
    res = joined[bricksin]
    
    # do this matching b/c it's *possible* multiple matches exist if a brick is near-equidistant
    closest_host_idx = SkyCoord.guess_from_table(res, unit=u.deg).match_to_catalog_sky(schosts)[0]
    res['closest_host_idx'] = closest_host_idx
    res['closest_host_name'] = hostnames[closest_host_idx]
    
    return res



    











In [13]:



    


host_bricks_3 = find_host_bricks(paperhosts, bricksdr3)

for brick in host_bricks_3:
    x = [brick['RA1'], brick['RA2'], brick['RA2'], brick['RA1'], brick['RA1']]
    y = [brick['DEC1'], brick['DEC1'], brick['DEC2'], brick['DEC2'], brick['DEC1']]
    plt.plot(x, y)
    
plt.scatter(paperhostscs.ra.deg, paperhostscs.dec.deg, c='r')

len(host_bricks_3)



    


















    
Out[13]:








446










    
























In [14]:



    


host_bricks_4 = find_host_bricks(paperhosts, bricksdr4)

for brick in host_bricks_4:
    x = [brick['RA1'], brick['RA2'], brick['RA2'], brick['RA1'], brick['RA1']]
    y = [brick['DEC1'], brick['DEC1'], brick['DEC2'], brick['DEC2'], brick['DEC1']]
    plt.plot(x, y)
    
plt.scatter(paperhostscs.ra.deg, paperhostscs.dec.deg, c='r')

len(host_bricks_4)



    


















    
Out[14]:








71

Do the downloads





In [35]:



    


def do_downloads(bricks, drnum):
    for brick in tqdm.tqdm_notebook(bricks,desc='bricks'):
        url = decals.brickname_to_catalog_url(brick['brickname'], int(drnum))
        fnout = 'decals_dr'+str(drnum)+'/catalogs/tractor-{}.fits'.format(brick['brickname'])

        if os.path.isfile(fnout):
            print(fnout, 'exists, skipping')
        else:
            print('Downloading', fnout)
            savedfn = data.download_file(url)
            shutil.move(savedfn, fnout)



    











In [36]:



    


do_downloads(host_bricks_3, 3)



    


















    






 
 















    






decals_dr3/catalogs/tractor-0003p202.fits exists, skipping
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decals_dr3/catalogs/tractor-1808p012.fits exists, skipping
decals_dr3/catalogs/tractor-1808p015.fits exists, skipping
decals_dr3/catalogs/tractor-1808p017.fits exists, skipping
decals_dr3/catalogs/tractor-1808p020.fits exists, skipping
decals_dr3/catalogs/tractor-1808p022.fits exists, skipping
decals_dr3/catalogs/tractor-1808p025.fits exists, skipping
decals_dr3/catalogs/tractor-1808p027.fits exists, skipping
decals_dr3/catalogs/tractor-1811p012.fits exists, skipping
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decals_dr3/catalogs/tractor-1822p197.fits exists, skipping
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decals_dr3/catalogs/tractor-1827p200.fits exists, skipping
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decals_dr3/catalogs/tractor-3546p002.fits exists, skipping
decals_dr3/catalogs/tractor-3546p005.fits exists, skipping
decals_dr3/catalogs/tractor-3546p007.fits exists, skipping

















In [37]:



    


do_downloads(host_bricks_4, 4)



    


















    






 
 















    






decals_dr4/catalogs/tractor-1224p365.fits exists, skipping
decals_dr4/catalogs/tractor-1225p360.fits exists, skipping
decals_dr4/catalogs/tractor-1226p362.fits exists, skipping
decals_dr4/catalogs/tractor-1227p357.fits exists, skipping
decals_dr4/catalogs/tractor-1227p365.fits exists, skipping
decals_dr4/catalogs/tractor-1228p360.fits exists, skipping
decals_dr4/catalogs/tractor-1228p367.fits exists, skipping
decals_dr4/catalogs/tractor-1229p362.fits exists, skipping
decals_dr4/catalogs/tractor-1230p357.fits exists, skipping
decals_dr4/catalogs/tractor-1230p365.fits exists, skipping
decals_dr4/catalogs/tractor-1231p360.fits exists, skipping
decals_dr4/catalogs/tractor-1231p367.fits exists, skipping
decals_dr4/catalogs/tractor-1232p362.fits exists, skipping
decals_dr4/catalogs/tractor-1233p357.fits exists, skipping
decals_dr4/catalogs/tractor-1233p365.fits exists, skipping
decals_dr4/catalogs/tractor-1234p360.fits exists, skipping
decals_dr4/catalogs/tractor-1234p367.fits exists, skipping
decals_dr4/catalogs/tractor-1235p362.fits exists, skipping
decals_dr4/catalogs/tractor-1236p357.fits exists, skipping
decals_dr4/catalogs/tractor-1236p365.fits exists, skipping
decals_dr4/catalogs/tractor-1237p360.fits exists, skipping
decals_dr4/catalogs/tractor-1237p367.fits exists, skipping
decals_dr4/catalogs/tractor-1238p362.fits exists, skipping
decals_dr4/catalogs/tractor-1239p365.fits exists, skipping
decals_dr4/catalogs/tractor-1240p360.fits exists, skipping
decals_dr4/catalogs/tractor-1485p322.fits exists, skipping
decals_dr4/catalogs/tractor-1485p325.fits exists, skipping
decals_dr4/catalogs/tractor-1487p317.fits exists, skipping
decals_dr4/catalogs/tractor-1487p327.fits exists, skipping
decals_dr4/catalogs/tractor-1488p322.fits exists, skipping
decals_dr4/catalogs/tractor-1488p325.fits exists, skipping
decals_dr4/catalogs/tractor-1489p320.fits exists, skipping
decals_dr4/catalogs/tractor-1489p330.fits exists, skipping
decals_dr4/catalogs/tractor-1490p317.fits exists, skipping
decals_dr4/catalogs/tractor-1490p327.fits exists, skipping
decals_dr4/catalogs/tractor-1491p315.fits exists, skipping
decals_dr4/catalogs/tractor-1491p325.fits exists, skipping
decals_dr4/catalogs/tractor-1491p332.fits exists, skipping
decals_dr4/catalogs/tractor-1492p320.fits exists, skipping
decals_dr4/catalogs/tractor-1492p330.fits exists, skipping
decals_dr4/catalogs/tractor-1493p317.fits exists, skipping
decals_dr4/catalogs/tractor-1493p327.fits exists, skipping
decals_dr4/catalogs/tractor-1494p315.fits exists, skipping
decals_dr4/catalogs/tractor-1494p322.fits exists, skipping
decals_dr4/catalogs/tractor-1494p325.fits exists, skipping
decals_dr4/catalogs/tractor-1494p332.fits exists, skipping
decals_dr4/catalogs/tractor-1495p320.fits exists, skipping
decals_dr4/catalogs/tractor-1495p330.fits exists, skipping
decals_dr4/catalogs/tractor-1496p317.fits exists, skipping
decals_dr4/catalogs/tractor-1496p327.fits exists, skipping
decals_dr4/catalogs/tractor-1497p315.fits exists, skipping
decals_dr4/catalogs/tractor-1497p322.fits exists, skipping
decals_dr4/catalogs/tractor-1497p325.fits exists, skipping
decals_dr4/catalogs/tractor-1497p332.fits exists, skipping
decals_dr4/catalogs/tractor-1498p320.fits exists, skipping
decals_dr4/catalogs/tractor-1498p330.fits exists, skipping
decals_dr4/catalogs/tractor-1499p317.fits exists, skipping
decals_dr4/catalogs/tractor-1499p327.fits exists, skipping
decals_dr4/catalogs/tractor-1500p315.fits exists, skipping
decals_dr4/catalogs/tractor-1500p322.fits exists, skipping
decals_dr4/catalogs/tractor-1500p325.fits exists, skipping
decals_dr4/catalogs/tractor-1500p330.fits exists, skipping
decals_dr4/catalogs/tractor-1501p320.fits exists, skipping
decals_dr4/catalogs/tractor-1501p327.fits exists, skipping
decals_dr4/catalogs/tractor-1502p317.fits exists, skipping
decals_dr4/catalogs/tractor-1502p325.fits exists, skipping
decals_dr4/catalogs/tractor-1503p330.fits exists, skipping
decals_dr4/catalogs/tractor-1504p320.fits exists, skipping
decals_dr4/catalogs/tractor-1504p327.fits exists, skipping
decals_dr4/catalogs/tractor-1505p325.fits exists, skipping
decals_dr4/catalogs/tractor-1506p322.fits exists, skipping

Content source: saga-survey/erik

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