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In [22]:

    
%load_ext autoreload
%autoreload 2









    



The autoreload extension is already loaded. To reload it, use:
  %reload_ext autoreload



In [1]:

    
from similarity import similarity
from similarity_intra import load_ontologies

# Computes the intra and inter semantic similarity between two neurons
# in: n1@str, n2@str: the two neurons to measure similarity
# out: (score:float, [(matching_properties, explanation@str)])
#similarity('PV Layer 1 cortex acetylcholine neuron', 'Layer 1a striatum gaba fast-spiking neuron')
similarity('Periventricular zone layer 5a neuron', 'Hypothalamic medial zone layer 5-6 neuron')









    Out[1]:





(0.6987179487179488,
 [(['HBP_LAYER:0000005'], 'shares layers'),
  (['ABA_REGION:1097'], 'sibling regions'),
  [],
  [],
  [],
  [],
  [],
  []])



In [24]:

    
import pandas as pd


# download neuroelectro summary spreadsheet from URL and import into pandas data frame
neuroelectro_dataset_url = "http://dev.neuroelectro.org/static/src/article_ephys_metadata_curated.csv"
table = pd.read_csv(neuroelectro_dataset_url, sep='\t', index_col = 0, header=0)



In [3]:

    
big_onto = load_ontologies()



In [4]:

    
name_spaces = [('NCBI_GENE', 'gene'), ('HBP_LAYER', 'layer'), ('HBP_MORPHOLOGY', 'shape'), ('REGION', 'region'),
              ('HBP_EPHYS', 'ephys'), ('MOUSE_LINE', 'line'),]
proj_name = 'projection'

proj_list = ['CStr', 'CSp', 'CThal', 'CCo', 'CTrig', 'CTect']

def annots_to_dict(annot_list):
    temp_dict = {}
    for annotation in annot_list:
        for s in name_spaces:
            if s[0] in annotation:
                term = _normalize([annotation], shorten = True)
                if term in proj_list:
                    temp_dict[proj_name] = term
                    continue
                if s[1] not in temp_dict:
                    temp_dict[s[1]] = term
                else:
                    temp_dict[s[1]] = '%s %s' %  (temp_dict[s[1]],  term)
    return temp_dict



In [5]:

    
strain_list = ['GIN', 'G42', 'GAD65-GFP', 'Thy1-YFP']
def add_animal_strain_to_neuron(input_neuron_name, strain):
    output_neuron_name = input_neuron_name

    if strain in strain_list:
        #output_neuron_name += ' from %s mouse line' % strain
        output_neuron_name += ' %s' % strain
    return output_neuron_name
def check_strain(neuron_name):
    for s in strain_list:
        if s in neuron_name:
            return 'MOUSE_LINE:%s' % s
    return None
check_strain('Hypothalamic medial zone dopaminergic neuron from Thy1-YFP mouse line')









    Out[5]:





'MOUSE_LINE:Thy1-YFP'



In [26]:

    
from sherlok import Sherlok
s = Sherlok('neuroner')

from similarity import _cleanup, _normalize

neuron_name = 'Primary visual cortex corticostriatal NPY somatostatin-expressing with depolarizing fast spiking AHP Layer 5a pyramidal cell GIN'
r = s.annotate(neuron_name)
#annot_list = format_annots(neuron_name, r.annotations)
al = _cleanup(r.annotations, neuron_name)
if check_strain(neuron_name):
    al.append(check_strain(neuron_name))
print _normalize(al, shorten = True)

#print annot_list
print al









    



VISp corticostriatal Npy Sst with depolarizing fast spiking AHP layer 5a pyramidal GIN GIN
[u'ABA_REGION:385', 'HBP_PROJECTION:7322', u'NCBI_GENE:109648', u'NCBI_GENE:20604', 'Missing:with depolarizing', u'HBP_EPHYS:0000080', u'HBP_EPHYS_TRIGGER:0000003', 'Missing:AHP', u'HBP_LAYER:0000050', u'HBP_MORPHOLOGY:0000001', 'Missing:GIN', 'MOUSE_LINE:GIN']



In [27]:

    
# use sherlok to annotate each curated neuron mention in neuroelectro
annot_vec = []
dict_list = []
for index, row in table.iterrows():
    neuron_name_orig = row['NeuronLongName']
    strain = unicode(row['Strain'])
    # if no neuron long name, use neurolex neuron name (should always be available)
    if pd.isnull(neuron_name_orig):
        neuron_name_orig = row['NeuronName']
        
    # hack for adding strain annotations, since not in neuroNER
    neuron_name = add_animal_strain_to_neuron(neuron_name_orig, strain)
    
    # annotate using sherlok
    r = s.annotate(neuron_name)
    cleaned_annotations = _cleanup(r.annotations, neuron_name)
    
    if check_strain(neuron_name):
        cleaned_annotations.append(check_strain(neuron_name))
        for c in cleaned_annotations:
            if c.startswith('NCBI_GENE'):
                cleaned_annotations.remove(c)
    short_annots = _normalize(cleaned_annotations, shorten = True)
    temp_dict = annots_to_dict(cleaned_annotations)
    temp_dict['neuron_name'] = neuron_name
    temp_dict['neuron_name_orig'] = neuron_name_orig
    temp_dict['short_name'] = short_annots
    temp_dict['annotations'] = cleaned_annotations
    temp_dict['Index'] = index
    dict_list.append(temp_dict)

#     f = format_annots(neuron_name, r.annotations)
#     annot_vec.append((neuron_name, f))



In [28]:

    
dict_list[4]









    Out[28]:





{'Index': 1121,
 'annotations': [u'ABA_REGION:385',
  u'HBP_LAYER:0000003',
  u'HBP_MORPHOLOGY:0000001',
  u'HBP_DEVELOPMENTAL:0000003'],
 'layer': 'layer 3',
 'neuron_name': 'Primary visual cortex layer 3 pyramidal young neurons',
 'neuron_name_orig': 'Primary visual cortex layer 3 pyramidal young neurons',
 'region': 'VISp',
 'shape': 'pyramidal',
 'short_name': 'VISp layer 3 pyramidal juvenile'}



In [29]:

    
col_names = [n[1] for n in name_spaces]
col_names.append('projection')

df = pd.DataFrame.from_records(dict_list, index = 'Index')
df

table[0:4]









    Out[29]:






  
    
      
      index
      Title
      Pmid
      PubYear
      LastAuthor
      ArticleID
      TableID
      NeuronName
      NeuronLongName
      NeuronPrefName
      ...
      mahpdur
      mahpdur_err
      mahpdur_n
      mahpdur_sd
      mahpdur_note
      adpdur
      adpdur_err
      adpdur_n
      adpdur_sd
      adpdur_note
    
    
      Index
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
    
  
  
    
      1296
      1296
      Cell type-specific effects of adenosine on cor...
      24108800
      2015
      Feldmeyer D
      88449
      35984
      Neocortex Martinotti cell
      medial prefrontal cortex low-threshold spiking...
      medial prefrontal cortex low-threshold spiking...
      ...
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
    
    
      1297
      1297
      Cell type-specific effects of adenosine on cor...
      24108800
      2015
      Feldmeyer D
      88449
      35984
      Neocortex basket cell
      medial prefrontal cortex fast spiking interne...
      medial prefrontal cortex fast spiking interne...
      ...
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
    
    
      1299
      1299
      Cell type-specific effects of adenosine on cor...
      24108800
      2015
      Feldmeyer D
      88449
      35984
      Neocortex basket cell
      somatosensory cortex fast-firing interneuron
      somatosensory cortex fast-firing interneuron
      ...
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
    
    
      1298
      1298
      Cell type-specific effects of adenosine on cor...
      24108800
      2015
      Feldmeyer D
      88449
      35984
      Neocortex interneuron deep
      somatosensory cortex non-fast firing interneuron
      somatosensory cortex non-fast firing interneuron
      ...
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
    
  

4 rows × 220 columns



In [30]:

    
table = table.join(df)



In [31]:

    
table.to_csv('df_uberon.csv', sep='\t')



In [32]:

    
df.to_pickle('df_uberon')



In [33]:

    
table.head()









    Out[33]:






  
    
      
      index
      Title
      Pmid
      PubYear
      LastAuthor
      ArticleID
      TableID
      NeuronName
      NeuronLongName
      NeuronPrefName
      ...
      annotations
      ephys
      gene
      layer
      line
      neuron_name
      neuron_name_orig
      region
      shape
      short_name
    
    
      Index
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
    
  
  
    
      1296
      1296
      Cell type-specific effects of adenosine on cor...
      24108800
      2015
      Feldmeyer D
      88449
      35984
      Neocortex Martinotti cell
      medial prefrontal cortex low-threshold spiking...
      medial prefrontal cortex low-threshold spiking...
      ...
      [UNKN_REGION:491, HBP_EPHYS:0000110, HBP_EPHYS...
      low threshold spiking
      NaN
      NaN
      NaN
      medial prefrontal cortex low-threshold spiking...
      medial prefrontal cortex low-threshold spiking...
      medial prefrontal cortex
      NaN
      medial prefrontal cortex low threshold spiking
    
    
      1297
      1297
      Cell type-specific effects of adenosine on cor...
      24108800
      2015
      Feldmeyer D
      88449
      35984
      Neocortex basket cell
      medial prefrontal cortex fast spiking interne...
      medial prefrontal cortex fast spiking interne...
      ...
      [UNKN_REGION:491, HBP_EPHYS:0000080, HBP_EPHYS...
      fast spiking
      NaN
      NaN
      NaN
      medial prefrontal cortex fast spiking interne...
      medial prefrontal cortex fast spiking interne...
      medial prefrontal cortex
      NaN
      medial prefrontal cortex fast spiking
    
    
      1299
      1299
      Cell type-specific effects of adenosine on cor...
      24108800
      2015
      Feldmeyer D
      88449
      35984
      Neocortex basket cell
      somatosensory cortex fast-firing interneuron
      somatosensory cortex fast-firing interneuron
      ...
      [ABA_REGION:453, HBP_EPHYS:0000080, HBP_EPHYS_...
      fast firing
      NaN
      NaN
      NaN
      somatosensory cortex fast-firing interneuron
      somatosensory cortex fast-firing interneuron
      SS
      NaN
      SS fast firing
    
    
      1298
      1298
      Cell type-specific effects of adenosine on cor...
      24108800
      2015
      Feldmeyer D
      88449
      35984
      Neocortex interneuron deep
      somatosensory cortex non-fast firing interneuron
      somatosensory cortex non-fast firing interneuron
      ...
      [ABA_REGION:453, HBP_EPHYS:0000090, HBP_EPHYS:...
      non-fast fast firing
      NaN
      NaN
      NaN
      somatosensory cortex non-fast firing interneuron
      somatosensory cortex non-fast firing interneuron
      SS
      NaN
      SS non-fast fast firing
    
    
      1121
      1121
      Age-related changes to layer 3 pyramidal cells...
      24323499
      2015
      Peters A
      88469
      36033
      Neocortex pyramidal cell layer 2-3
      Primary visual cortex layer 3 pyramidal young ...
      Primary visual cortex layer 3 pyramidal young ...
      ...
      [ABA_REGION:385, HBP_LAYER:0000003, HBP_MORPHO...
      NaN
      NaN
      layer 3
      NaN
      Primary visual cortex layer 3 pyramidal young ...
      Primary visual cortex layer 3 pyramidal young ...
      VISp
      pyramidal
      VISp layer 3 pyramidal juvenile
    
  

5 rows × 230 columns



In [520]:

    
# load in csv of Design.csv dataset

gene_exp_path = '/home/stripathy/brainCellTypeSpecificGenes/data/Design.tsv'
gene_exp_table = pd.read_csv(gene_exp_path, sep='\t', index_col = 0, header=0)



In [522]:

    
gene_exp_table.tail()









    Out[522]:






  
    
      
      MajorType
      JustPyra
      GabaDeep
      PyramidalDeep
      Neurotransmitter1
      ShinyNames
      ShinySubtypes
      CellType
      forContanim
      Normalize2.0
      ...
      Method
      RNA.isolation.method
      RNA.amplification.and.labeling.method
      Platform
      Reference
      PMID
      SharePermit
      Notes
      MouseStrain
      ReporterGene
    
    
      Cell.Type..Samples
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
    
  
  
    
      GSM1698225,GSM1698226,GSM1698227
      Neuron
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      Pyramidal
      T
      ...
      TRAP
      NaN
      NaN
      GPL1261
      Shrestha et al. 2015
      26371510
      T
      shreejoy wanted them
      NaN
      NaN
    
    
      GSM1698228,GSM16982289,GSM1698230
      Neuron
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      Pyramidal
      T
      ...
      TRAP
      NaN
      NaN
      GPL1261
      Shrestha et al. 2015
      26371510
      T
      shreejoy wanted them
      NaN
      NaN
    
    
      GSM1698231,GSM1698232,GSM1698233
      Neuron
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      Gabaergic
      T
      ...
      TRAP
      NaN
      NaN
      GPL1261
      Shrestha et al. 2015
      26371510
      T
      shreejoy wanted them
      NaN
      NaN
    
    
      GSM1698237,GSM1698238,GSM1698239
      Glia
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      Oligo
      T
      ...
      TRAP
      NaN
      NaN
      GPL1261
      Shrestha et al. 2015
      26371510
      T
      shreejoy wanted them
      NaN
      NaN
    
    
      GSM1698234,GSM1698235,GSM1698236
      Glia
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      Astrocyte
      T
      ...
      TRAP
      NaN
      NaN
      GPL1261
      Shrestha et al. 2015
      26371510
      T
      shreejoy wanted them
      NaN
      NaN
    
  

5 rows × 29 columns



In [523]:

    
import re

# use sherlok to annotate each curated neuron mention in neuroelectro
#annot_vec = []
gene_dict_list = []
for index, row in gene_exp_table.iterrows():
    neuron_name = row['neuroNER Inferred Properties']
    
    # if no neuron long name, just move on
    if pd.isnull(neuron_name):
        temp_dict = {}
        temp_dict['annotations'] = []
        temp_dict['Index'] = index
        temp_dict['short_name'] = ''
        temp_dict['neuron_name'] = ''
        gene_dict_list.append(temp_dict)
        continue
        # neuron_name = row['NeuronName']
    
    mouse_line_match = re.search('from .+ mouse line', neuron_name)
    if mouse_line_match:
        strain_annotation = check_strain(neuron_name)
        neuron_name = re.sub('from .+ mouse line', '', neuron_name)
    
    # annotate using sherlok
    r = s.annotate(neuron_name)
    cleaned_annotations = _cleanup(r.annotations, neuron_name)
    if mouse_line_match:
        cleaned_annotations.append(strain_annotation)
        for c in cleaned_annotations:
            if c.startswith('NCBI_GENE'):
                cleaned_annotations.remove(c)
    short_annots = _normalize(cleaned_annotations, shorten = True)
    temp_dict = annots_to_dict(cleaned_annotations)
    temp_dict['short_name'] = short_annots
    temp_dict['neuron_name'] = neuron_name
    temp_dict['annotations'] = cleaned_annotations
    temp_dict['Index'] = index
    gene_dict_list.append(temp_dict)

#     f = format_annots(neuron_name, r.annotations)
#     annot_vec.append((neuron_name, f))



In [524]:

    
df_gene = pd.DataFrame.from_records(gene_dict_list, index = 'Index')
gene_exp_table = gene_exp_table.join(df_gene)



In [29]:

    
gene_exp_table.to_csv('df_gene.csv', sep='\t', encoding='utf-8')



In [525]:

    
for index, row in gene_exp_table.iterrows():
    curr_list = row
    sim_vec = []
    sim_val_vec = []
    for d in dict_list:
        sim = similarity2(curr_list['annotations'], d['annotations'], symmetric = False, use_inter_similarity = False, )
        sim_vec.append(sim)
        sim_val_vec.append(sim[0])
    sim_val_vec
    inds = sorted(range(len(sim_val_vec)),key=lambda x:sim_val_vec[x], reverse = True)
    print 'target name -> %s' % curr_list['short_name']
    #print curr_list['annotations']
    for i in range(0,20):
        print 'match value: %.2f, best match: %s' % (sim_val_vec[inds[i]], dict_list[inds[i]]['short_name'])
        #print dict_list[inds[i]]['annotations']
    print '\n'









    



target name -> Isocortex L5a Etv1 ST Pyr
match value: 0.68, best match: SSp-bfd Pyr L5a
match value: 0.68, best match: L5a SS barrel column small tuft Pyr
match value: 0.68, best match: L5a somatosensory SSp-bfd Pyr
match value: 0.68, best match: L5a somatosensory SSp-bfd Pyr
match value: 0.68, best match: L5a somatosensory SSp-bfd Pyr
match value: 0.68, best match: primary somatosensory SSp-bfd L5a Pyr
match value: 0.68, best match: somatosensory SSp-bfd L5a Pyr
match value: 0.65, best match: Isocortex L5 Pyr
match value: 0.65, best match: Isocortex L5 large Pyr
match value: 0.65, best match: L5 Isocortex Pyr
match value: 0.65, best match: Isocortex L5 Pyr
match value: 0.62, best match: ORB L5 large Pyr
match value: 0.62, best match: VIS L5 R S tall Pyr
match value: 0.62, best match: VIS L5 B tall Pyr
match value: 0.62, best match: VIS L5 R S short Pyr
match value: 0.62, best match: MOp L5 CThal Pyr
match value: 0.62, best match: MOp L5 CSp Pyr
match value: 0.62, best match: MOp L5 CCo Pyr
match value: 0.62, best match: MOp L5 CStr Pyr
match value: 0.62, best match: L5 frontal Pyr projecting PERI CTX 


target name -> Isocortex L5b Colgalt2 TT Pyr
match value: 0.83, best match: SSs L5b CSp TT large Pyr
match value: 0.83, best match: MOp L5b CSp TT large Pyr
match value: 0.83, best match: MOp L5b CSp TT large Pyr
match value: 0.83, best match: MOp L5b CSp TT large Pyr
match value: 0.77, best match: L5 VIS large TT Pyr
match value: 0.77, best match: SS L5 TT Pyr
match value: 0.68, best match: SS L5b Pyr
match value: 0.68, best match: SSp-bfd Pyr L5b
match value: 0.68, best match: L5b SS barrel column extensive tuft Pyr
match value: 0.68, best match: primary somatosensory SSp-bfd L5b Pyr R S
match value: 0.68, best match: primary somatosensory SSp-bfd L5b Pyr I B
match value: 0.68, best match: somatosensory SSp-bfd L5b Pyr
match value: 0.65, best match: Isocortex L5 Pyr
match value: 0.65, best match: Isocortex L5 large Pyr
match value: 0.65, best match: L5 Isocortex Pyr
match value: 0.65, best match: Isocortex L5 Pyr
match value: 0.62, best match: ORB L5 large Pyr
match value: 0.62, best match: VIS L5 R S tall Pyr
match value: 0.62, best match: VIS L5 B tall Pyr
match value: 0.62, best match: VIS L5 R S short Pyr


target name -> Isocortex L6 Ntsr1 Pyr
match value: 0.81, best match: SSp-bfd CThal Pyr L6 with F AHP
match value: 0.81, best match: SSp-bfd non- CThal Pyr L6 with medium AHP
match value: 0.81, best match: L6 SS Pyr
match value: 0.81, best match: L6 SS barrel column short Pyr
match value: 0.81, best match: ORB L6 small Pyr
match value: 0.81, best match: anterior ACA L6 Pyr
match value: 0.73, best match: Isocortex Pyr L5-6
match value: 0.73, best match: Isocortex Pyr L5-6
match value: 0.73, best match: Isocortex Pyr L5-6
match value: 0.70, best match: ORB L5-6 Pyr
match value: 0.70, best match: SSp-bfd L6a CCo Pyr with infragranular arborization axons
match value: 0.70, best match: L6a SSp-bfd Pyr CThal with large terminal arbors
match value: 0.70, best match: SS L5-6 Pyr
match value: 0.70, best match: ORB L5-6 Pyr
match value: 0.70, best match: medial ORB L5-6 Low-Threshold Calcium S Pyr
match value: 0.70, best match: medial ORB L5-6 Non-Low-Threshold Calcium S Pyr
match value: 0.65, best match: L6 MO NPyr Slc17a7
match value: 0.65, best match: SS L6 Mart
match value: 0.65, best match: VISp L6 Antidromic Corticofugal Antidromic Corticofugal
match value: 0.65, best match: VISp L6 Non-antidromic Corticofugal


target name -> Isocortex Cck
match value: 0.93, best match: ORB L2-3 NPyr Cck R S
match value: 0.93, best match: ORB L2-3 NPyr Cck gaba B S
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex L4 stellate
match value: 0.60, best match: Isocortex L2-3 LT S
match value: 0.60, best match: Isocortex L5 Pyr
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex L4 stellate
match value: 0.60, best match: Isocortex L4 stellate
match value: 0.60, best match: Isocortex L5 large Pyr
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex Pyr L2-3
match value: 0.60, best match: Isocortex Pyr L2-3
match value: 0.60, best match: Isocortex Pyr L5-6
match value: 0.60, best match: Isocortex L2-3 gaba L S subtype 1 Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba L NF F S Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba L S subtype 2 Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba B NAd Ad subtype 2 Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba F Ad Htr3a


target name -> BS Chat ACh motor
match value: 0.38, best match: SOCm ventral
match value: 0.38, best match: SOCm dorsal
match value: 0.38, best match: SOCm ventral
match value: 0.38, best match: SOCm dorsal
match value: 0.38, best match: LC neuropeptide S expressing
match value: 0.38, best match: LC NAdr
match value: 0.38, best match: LC
match value: 0.38, best match: LC NAdr
match value: 0.38, best match: silent PG caudalis caudalis
match value: 0.38, best match: Spontaneuous S PG caudalis caudalis
match value: 0.38, best match: LC NAdr
match value: 0.38, best match: SUT
match value: 0.32, best match: BLA principal with input from ORB CTX
match value: 0.32, best match: SUB Pyr projecting to RSP CTX
match value: 0.32, best match: SUB Pyr projecting to lateral entorhinal cortex CTX
match value: 0.32, best match: SUB Pyr projecting to medial entorhinal cortex CTX
match value: 0.32, best match: SUB Pyr projecting to ORB CTX
match value: 0.32, best match: L2-3 frontal Pyr projecting PERI CTX
match value: 0.32, best match: L5 frontal Pyr projecting PERI CTX 
match value: 0.32, best match: medial entorihinal CTX L2 stellate


target name -> basal forebrain Chat ACh
match value: 0.67, best match: basal forebrain Chat early S
match value: 0.67, best match: basal forebrain Chat L S
match value: 0.67, best match: basal forebrain ACh
match value: 0.33, best match: Basalis nucleus ACh
match value: 0.33, best match: CP ACh
match value: 0.33, best match: CP ACh
match value: 0.33, best match: CP ACh
match value: 0.33, best match: CP ACh
match value: 0.33, best match: Basalis nucleus ACh
match value: 0.33, best match: Basalis nucleus ACh
match value: 0.33, best match: dorsolateral pontine ACh rostral subcoeruleus
match value: 0.33, best match: medial septum diagonal band ACh Slow S
match value: 0.33, best match: CP aspiny ACh
match value: 0.33, best match: CA1 ACh dependent plateau potentials Pyr
match value: 0.33, best match: nucleus basalis ventral pallidal region Chat
match value: 0.33, best match: nucleus basalis ventral pallidal region Chat
match value: 0.33, best match: CP ACh
match value: 0.33, best match: Basalis nucleus ACh
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive


target name -> spinal cord Chat ACh
match value: 0.40, best match: Basalis nucleus ACh
match value: 0.40, best match: basal forebrain Chat early S
match value: 0.40, best match: basal forebrain Chat L S
match value: 0.40, best match: CP ACh
match value: 0.40, best match: CP ACh
match value: 0.40, best match: CP ACh
match value: 0.40, best match: CP ACh
match value: 0.40, best match: Basalis nucleus ACh
match value: 0.40, best match: Basalis nucleus ACh
match value: 0.40, best match: dorsolateral pontine ACh rostral subcoeruleus
match value: 0.40, best match: medial septum diagonal band ACh Slow S
match value: 0.40, best match: CP aspiny ACh
match value: 0.40, best match: CA1 ACh dependent plateau potentials Pyr
match value: 0.40, best match: nucleus basalis ventral pallidal region Chat
match value: 0.40, best match: nucleus basalis ventral pallidal region Chat
match value: 0.40, best match: CP ACh
match value: 0.40, best match: basal forebrain ACh
match value: 0.40, best match: Basalis nucleus ACh
match value: 0.20, best match: spinal cord Motor
match value: 0.20, best match: spinal cord ventral horn motor alpha


target name -> CP Chat ACh giant
match value: 0.71, best match: CP ACh
match value: 0.71, best match: CP ACh
match value: 0.71, best match: CP ACh
match value: 0.71, best match: CP ACh
match value: 0.71, best match: CP aspiny ACh
match value: 0.71, best match: CP ACh
match value: 0.43, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.43, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba
match value: 0.43, best match: CP Pvalb Htr3a F S gaba
match value: 0.43, best match: CP medium spiny
match value: 0.43, best match: CP Pvalb R S gaba
match value: 0.43, best match: CP Pvalb B gaba
match value: 0.43, best match: CP Pvalb I B gaba
match value: 0.43, best match: CP medium spiny
match value: 0.43, best match: CP Gfap
match value: 0.43, best match: CP gaba F S
match value: 0.43, best match: CP medium spiny
match value: 0.43, best match: CP Th
match value: 0.43, best match: CP Th
match value: 0.43, best match: CP Npy Sst Nos1 Nos1 GABAergic plateau-depolarization LT S


target name -> Isocortex Cort
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex L4 stellate
match value: 0.60, best match: Isocortex L2-3 LT S
match value: 0.60, best match: Isocortex L5 Pyr
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex L4 stellate
match value: 0.60, best match: Isocortex L4 stellate
match value: 0.60, best match: Isocortex L5 large Pyr
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex Pyr L2-3
match value: 0.60, best match: Isocortex Pyr L2-3
match value: 0.60, best match: Isocortex Pyr L5-6
match value: 0.60, best match: Isocortex L2-3 gaba L S subtype 1 Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba L NF F S Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba L S subtype 2 Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba B NAd Ad subtype 2 Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba F Ad Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba B NAd Ad subtype 1 Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba I S bipolar Htr3a


target name -> CP Drd1 medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium -sized spiny projection
match value: 0.71, best match: CP medium -sized spiny projection
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny gaba
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny


target name -> CP Drd2 medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium -sized spiny projection
match value: 0.71, best match: CP medium -sized spiny projection
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny gaba
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny


target name -> CB Grm2 expresing Golgi
match value: 0.71, best match: CB Golgi
match value: 0.71, best match: CB Golgi
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB granule
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB VERM II-VIII lobules Purkinje
match value: 0.43, best match: CB granule
match value: 0.43, best match: Deep CB Nucleus non- gaba small
match value: 0.43, best match: Deep CB Nucleus non- gaba large
match value: 0.43, best match: Deep CB Nucleus gaba Gad1 small
match value: 0.43, best match: CB granule
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: Somatosensory CB C3 granule


target name -> CB Grp unipolar brush
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB granule
match value: 0.43, best match: CB Golgi
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB VERM II-VIII lobules Purkinje
match value: 0.43, best match: CB granule
match value: 0.43, best match: Deep CB Nucleus non- gaba small
match value: 0.43, best match: Deep CB Nucleus non- gaba large
match value: 0.43, best match: Deep CB Nucleus gaba Gad1 small
match value: 0.43, best match: CB granule
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Golgi
match value: 0.43, best match: Somatosensory CB C3 granule


target name -> CB Lypd6 basket and stellate
match value: 0.33, best match: CB Purkinje
match value: 0.33, best match: CB Purkinje
match value: 0.33, best match: CB Purkinje
match value: 0.33, best match: CB Purkinje
match value: 0.33, best match: CB Purkinje
match value: 0.33, best match: CB granule
match value: 0.33, best match: CB Golgi
match value: 0.33, best match: CB Purkinje
match value: 0.33, best match: CB Purkinje
match value: 0.33, best match: CB Purkinje
match value: 0.33, best match: CB VERM II-VIII lobules Purkinje
match value: 0.33, best match: CB granule
match value: 0.33, best match: Deep CB Nucleus non- gaba small
match value: 0.33, best match: Deep CB Nucleus non- gaba large
match value: 0.33, best match: Deep CB Nucleus gaba Gad1 small
match value: 0.33, best match: CB granule
match value: 0.33, best match: CB Purkinje
match value: 0.33, best match: CB Purkinje
match value: 0.33, best match: CB Golgi
match value: 0.33, best match: Somatosensory CB C3 granule


target name -> CB Neurod1 granule
match value: 0.71, best match: CB granule
match value: 0.71, best match: CB granule
match value: 0.71, best match: CB granule
match value: 0.71, best match: Somatosensory CB C3 granule
match value: 0.71, best match: CB granule
match value: 0.71, best match: CB granule
match value: 0.71, best match: CB granule
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Golgi
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB VERM II-VIII lobules Purkinje
match value: 0.43, best match: Deep CB Nucleus non- gaba small
match value: 0.43, best match: Deep CB Nucleus non- gaba large
match value: 0.43, best match: Deep CB Nucleus gaba Gad1 small


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> CB Pcp2 Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB VERM II-VIII lobules Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.66, best match: Densely Purkinje innerverted, FL targeting, gly
match value: 0.43, best match: CB granule
match value: 0.43, best match: CB Golgi
match value: 0.43, best match: CB granule


target name -> Isocortex Pnoc
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex L4 stellate
match value: 0.60, best match: Isocortex L2-3 LT S
match value: 0.60, best match: Isocortex L5 Pyr
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex L4 stellate
match value: 0.60, best match: Isocortex L4 stellate
match value: 0.60, best match: Isocortex L5 large Pyr
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex Pyr L2-3
match value: 0.60, best match: Isocortex Pyr L2-3
match value: 0.60, best match: Isocortex Pyr L5-6
match value: 0.60, best match: Isocortex L2-3 gaba L S subtype 1 Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba L NF F S Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba L S subtype 2 Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba B NAd Ad subtype 2 Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba F Ad Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba B NAd Ad subtype 1 Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba I S bipolar Htr3a


target name -> CB Sept4 Bergmann
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB granule
match value: 0.43, best match: CB Golgi
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB VERM II-VIII lobules Purkinje
match value: 0.43, best match: CB granule
match value: 0.43, best match: Deep CB Nucleus non- gaba small
match value: 0.43, best match: Deep CB Nucleus non- gaba large
match value: 0.43, best match: Deep CB Nucleus gaba Gad1 small
match value: 0.43, best match: CB granule
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Purkinje
match value: 0.43, best match: CB Golgi
match value: 0.43, best match: Somatosensory CB C3 granule


target name -> CB
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB granule
match value: 1.00, best match: CB Golgi
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB VERM II-VIII lobules Purkinje
match value: 1.00, best match: CB granule
match value: 1.00, best match: Deep CB Nucleus non- gaba small
match value: 1.00, best match: Deep CB Nucleus non- gaba large
match value: 1.00, best match: Deep CB Nucleus gaba Gad1 small
match value: 1.00, best match: CB granule
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB Golgi
match value: 1.00, best match: Somatosensory CB C3 granule


target name -> Isocortex
match value: 1.00, best match: Isocortex basket
match value: 1.00, best match: Isocortex L4 stellate
match value: 1.00, best match: Isocortex L2-3 LT S
match value: 1.00, best match: Isocortex L5 Pyr
match value: 1.00, best match: Isocortex basket
match value: 1.00, best match: Isocortex basket
match value: 1.00, best match: Isocortex L4 stellate
match value: 1.00, best match: Isocortex L4 stellate
match value: 1.00, best match: Isocortex L5 large Pyr
match value: 1.00, best match: Isocortex basket
match value: 1.00, best match: Isocortex Pyr L2-3
match value: 1.00, best match: Isocortex Pyr L2-3
match value: 1.00, best match: Isocortex Pyr L5-6
match value: 1.00, best match: Isocortex L2-3 gaba L S subtype 1 Htr3a
match value: 1.00, best match: Isocortex L2-3 gaba L NF F S Htr3a
match value: 1.00, best match: Isocortex L2-3 gaba L S subtype 2 Htr3a
match value: 1.00, best match: Isocortex L2-3 gaba B NAd Ad subtype 2 Htr3a
match value: 1.00, best match: Isocortex L2-3 gaba F Ad Htr3a
match value: 1.00, best match: Isocortex L2-3 gaba B NAd Ad subtype 1 Htr3a
match value: 1.00, best match: Isocortex L2-3 gaba I S bipolar Htr3a


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> MO L5 CCo Pyr
match value: 0.98, best match: MOp L5 CCo Pyr
match value: 0.96, best match: SSp L5 CCo projecting Pyr
match value: 0.67, best match: SSp-bfd L6a CCo Pyr with infragranular arborization axons
match value: 0.56, best match: L5 MO Pyr
match value: 0.56, best match: L4 -projecting L6 inhibitory CCo infragranular laminae laminae of the SSp-bfd CTX
match value: 0.56, best match: CCo L6 -projecting, L6 inhibitory infragranular laminae laminae of the SSp-bfd CTX
match value: 0.54, best match: MOp L5 CThal Pyr
match value: 0.54, best match: MOp L5 CSp Pyr
match value: 0.54, best match: MOp L5 CStr Pyr
match value: 0.54, best match: Isocortex L5 Pyr
match value: 0.54, best match: Isocortex L5 large Pyr
match value: 0.54, best match: L5 Isocortex Pyr
match value: 0.54, best match: Isocortex L5 Pyr
match value: 0.52, best match: ORB L5 large Pyr
match value: 0.52, best match: VIS L5 R S tall Pyr
match value: 0.52, best match: VIS L5 B tall Pyr
match value: 0.52, best match: VIS L5 R S short Pyr
match value: 0.52, best match: L5 frontal Pyr projecting PERI CTX 
match value: 0.52, best match: R S , L5 Pyr of SS  YFP Thy1-YFP
match value: 0.52, best match: SS L5 apical Pyr


target name -> MO L5 CCo Pyr
match value: 0.98, best match: MOp L5 CCo Pyr
match value: 0.96, best match: SSp L5 CCo projecting Pyr
match value: 0.67, best match: SSp-bfd L6a CCo Pyr with infragranular arborization axons
match value: 0.56, best match: L5 MO Pyr
match value: 0.56, best match: L4 -projecting L6 inhibitory CCo infragranular laminae laminae of the SSp-bfd CTX
match value: 0.56, best match: CCo L6 -projecting, L6 inhibitory infragranular laminae laminae of the SSp-bfd CTX
match value: 0.54, best match: MOp L5 CThal Pyr
match value: 0.54, best match: MOp L5 CSp Pyr
match value: 0.54, best match: MOp L5 CStr Pyr
match value: 0.54, best match: Isocortex L5 Pyr
match value: 0.54, best match: Isocortex L5 large Pyr
match value: 0.54, best match: L5 Isocortex Pyr
match value: 0.54, best match: Isocortex L5 Pyr
match value: 0.52, best match: ORB L5 large Pyr
match value: 0.52, best match: VIS L5 R S tall Pyr
match value: 0.52, best match: VIS L5 B tall Pyr
match value: 0.52, best match: VIS L5 R S short Pyr
match value: 0.52, best match: L5 frontal Pyr projecting PERI CTX 
match value: 0.52, best match: R S , L5 Pyr of SS  YFP Thy1-YFP
match value: 0.52, best match: SS L5 apical Pyr


target name -> MO L5 CCo Pyr
match value: 0.98, best match: MOp L5 CCo Pyr
match value: 0.96, best match: SSp L5 CCo projecting Pyr
match value: 0.67, best match: SSp-bfd L6a CCo Pyr with infragranular arborization axons
match value: 0.56, best match: L5 MO Pyr
match value: 0.56, best match: L4 -projecting L6 inhibitory CCo infragranular laminae laminae of the SSp-bfd CTX
match value: 0.56, best match: CCo L6 -projecting, L6 inhibitory infragranular laminae laminae of the SSp-bfd CTX
match value: 0.54, best match: MOp L5 CThal Pyr
match value: 0.54, best match: MOp L5 CSp Pyr
match value: 0.54, best match: MOp L5 CStr Pyr
match value: 0.54, best match: Isocortex L5 Pyr
match value: 0.54, best match: Isocortex L5 large Pyr
match value: 0.54, best match: L5 Isocortex Pyr
match value: 0.54, best match: Isocortex L5 Pyr
match value: 0.52, best match: ORB L5 large Pyr
match value: 0.52, best match: VIS L5 R S tall Pyr
match value: 0.52, best match: VIS L5 B tall Pyr
match value: 0.52, best match: VIS L5 R S short Pyr
match value: 0.52, best match: L5 frontal Pyr projecting PERI CTX 
match value: 0.52, best match: R S , L5 Pyr of SS  YFP Thy1-YFP
match value: 0.52, best match: SS L5 apical Pyr


target name -> MO L5 CSp Pyr
match value: 0.98, best match: MOp L5 CSp Pyr
match value: 0.91, best match: MOp L5b CSp TT large Pyr
match value: 0.91, best match: MOp L5b CSp TT large Pyr
match value: 0.91, best match: MOp L5b CSp TT large Pyr
match value: 0.89, best match: SSs L5b CSp TT large Pyr
match value: 0.69, best match: MOp CSp Pyr
match value: 0.56, best match: L5 MO Pyr
match value: 0.55, best match: secondary motor cortex CSp Pyr
match value: 0.54, best match: MOp L5 CThal Pyr
match value: 0.54, best match: MOp L5 CCo Pyr
match value: 0.54, best match: MOp L5 CStr Pyr
match value: 0.54, best match: Isocortex L5 Pyr
match value: 0.54, best match: Isocortex L5 large Pyr
match value: 0.54, best match: L5 Isocortex Pyr
match value: 0.54, best match: Isocortex L5 Pyr
match value: 0.52, best match: ORB L5 large Pyr
match value: 0.52, best match: VIS L5 R S tall Pyr
match value: 0.52, best match: VIS L5 B tall Pyr
match value: 0.52, best match: VIS L5 R S short Pyr
match value: 0.52, best match: L5 frontal Pyr projecting PERI CTX 


target name -> MO L5 CSp Pyr
match value: 0.98, best match: MOp L5 CSp Pyr
match value: 0.91, best match: MOp L5b CSp TT large Pyr
match value: 0.91, best match: MOp L5b CSp TT large Pyr
match value: 0.91, best match: MOp L5b CSp TT large Pyr
match value: 0.89, best match: SSs L5b CSp TT large Pyr
match value: 0.69, best match: MOp CSp Pyr
match value: 0.56, best match: L5 MO Pyr
match value: 0.55, best match: secondary motor cortex CSp Pyr
match value: 0.54, best match: MOp L5 CThal Pyr
match value: 0.54, best match: MOp L5 CCo Pyr
match value: 0.54, best match: MOp L5 CStr Pyr
match value: 0.54, best match: Isocortex L5 Pyr
match value: 0.54, best match: Isocortex L5 large Pyr
match value: 0.54, best match: L5 Isocortex Pyr
match value: 0.54, best match: Isocortex L5 Pyr
match value: 0.52, best match: ORB L5 large Pyr
match value: 0.52, best match: VIS L5 R S tall Pyr
match value: 0.52, best match: VIS L5 B tall Pyr
match value: 0.52, best match: VIS L5 R S short Pyr
match value: 0.52, best match: L5 frontal Pyr projecting PERI CTX 


target name -> MO L5 CSp Pyr
match value: 0.98, best match: MOp L5 CSp Pyr
match value: 0.91, best match: MOp L5b CSp TT large Pyr
match value: 0.91, best match: MOp L5b CSp TT large Pyr
match value: 0.91, best match: MOp L5b CSp TT large Pyr
match value: 0.89, best match: SSs L5b CSp TT large Pyr
match value: 0.69, best match: MOp CSp Pyr
match value: 0.56, best match: L5 MO Pyr
match value: 0.55, best match: secondary motor cortex CSp Pyr
match value: 0.54, best match: MOp L5 CThal Pyr
match value: 0.54, best match: MOp L5 CCo Pyr
match value: 0.54, best match: MOp L5 CStr Pyr
match value: 0.54, best match: Isocortex L5 Pyr
match value: 0.54, best match: Isocortex L5 large Pyr
match value: 0.54, best match: L5 Isocortex Pyr
match value: 0.54, best match: Isocortex L5 Pyr
match value: 0.52, best match: ORB L5 large Pyr
match value: 0.52, best match: VIS L5 R S tall Pyr
match value: 0.52, best match: VIS L5 B tall Pyr
match value: 0.52, best match: VIS L5 R S short Pyr
match value: 0.52, best match: L5 frontal Pyr projecting PERI CTX 


target name -> VIS L5 CTect Pyr
match value: 0.56, best match: VIS L5 R S tall Pyr
match value: 0.56, best match: VIS L5 B tall Pyr
match value: 0.56, best match: VIS L5 R S short Pyr
match value: 0.56, best match: L5 VIS large TT Pyr
match value: 0.56, best match: VIS L5 R S Pyr
match value: 0.56, best match: VIS L5 B Pyr
match value: 0.56, best match: associative parietal and VIS L5 Pyr projecting to superior colliculus
match value: 0.56, best match: associative parietal and VIS L5 Pyr projecting to contralateral CTX
match value: 0.56, best match: associative parietal and VIS L5 Pyr projecting to contralateral CTX
match value: 0.56, best match: associative parietal and VIS L5 Pyr projecting to superior colliculus
match value: 0.54, best match: Isocortex L5 Pyr
match value: 0.54, best match: Isocortex L5 large Pyr
match value: 0.54, best match: L5 Isocortex Pyr
match value: 0.54, best match: Isocortex L5 Pyr
match value: 0.52, best match: ORB L5 large Pyr
match value: 0.52, best match: MOp L5 CThal Pyr
match value: 0.52, best match: MOp L5 CSp Pyr
match value: 0.52, best match: MOp L5 CCo Pyr
match value: 0.52, best match: MOp L5 CStr Pyr
match value: 0.52, best match: L5 frontal Pyr projecting PERI CTX 


target name -> ACA L6 CThal Ad Pyr
match value: 0.96, best match: SSp-bfd CThal Pyr L6 with F AHP
match value: 0.96, best match: SSp-bfd non- CThal Pyr L6 with medium AHP
match value: 0.89, best match: L6a SSp-bfd Pyr CThal with large terminal arbors
match value: 0.67, best match: MOp L5 CThal Pyr
match value: 0.67, best match: SSp L5 CThal projecting Pyr
match value: 0.56, best match: anterior ACA L6 Pyr
match value: 0.55, best match: L5 frontal Pyr CThal projecting
match value: 0.52, best match: L6 SS Pyr
match value: 0.52, best match: L6 SS barrel column short Pyr
match value: 0.52, best match: ORB L6 small Pyr
match value: 0.47, best match: Isocortex Pyr L5-6
match value: 0.47, best match: Isocortex Pyr L5-6
match value: 0.47, best match: Isocortex Pyr L5-6
match value: 0.45, best match: ORB L5-6 Pyr
match value: 0.45, best match: SSp-bfd L6a CCo Pyr with infragranular arborization axons
match value: 0.45, best match: SS L5-6 Pyr
match value: 0.45, best match: ORB L5-6 Pyr
match value: 0.45, best match: medial ORB L5-6 Low-Threshold Calcium S Pyr
match value: 0.45, best match: medial ORB L5-6 Non-Low-Threshold Calcium S Pyr
match value: 0.41, best match: L6 MO NPyr Slc17a7


target name -> SSp L5-6 Pyr Thy1-YFP
match value: 0.91, best match: R S , L5 Pyr of SS  YFP Thy1-YFP
match value: 0.68, best match: Isocortex Pyr L5-6
match value: 0.68, best match: SS L5-6 Pyr
match value: 0.68, best match: Isocortex Pyr L5-6
match value: 0.68, best match: Isocortex Pyr L5-6
match value: 0.66, best match: ORB L5-6 Pyr
match value: 0.66, best match: ORB L5-6 Pyr
match value: 0.66, best match: medial ORB L5-6 Low-Threshold Calcium S Pyr
match value: 0.66, best match: medial ORB L5-6 Non-Low-Threshold Calcium S Pyr
match value: 0.65, best match: SSp L5 CThal projecting Pyr
match value: 0.65, best match: SSp L5 CTrig projecting Pyr
match value: 0.65, best match: SSp L5 CStr projecting Pyr
match value: 0.65, best match: SSp L5 CCo projecting Pyr
match value: 0.65, best match: SSp L5 Pyr
match value: 0.62, best match: SS L5 apical Pyr
match value: 0.62, best match: SS L5 apical Pyr
match value: 0.62, best match: SSp-bfd CThal Pyr L6 with F AHP
match value: 0.62, best match: SSp-bfd non- CThal Pyr L6 with medium AHP
match value: 0.62, best match: Isocortex L5 Pyr
match value: 0.62, best match: SS L5 Pyr


target name -> ACA L5 TT Pyr Thy1-YFP
match value: 0.83, best match: R S , L5 Pyr of SS  YFP Thy1-YFP
match value: 0.71, best match: L5 VIS large TT Pyr
match value: 0.71, best match: SS L5 TT Pyr
match value: 0.63, best match: anterior ACA L5 Pyr
match value: 0.63, best match: SSs L5b CSp TT large Pyr
match value: 0.63, best match: MOp L5b CSp TT large Pyr
match value: 0.63, best match: MOp L5b CSp TT large Pyr
match value: 0.63, best match: MOp L5b CSp TT large Pyr
match value: 0.61, best match: Isocortex L5 Pyr
match value: 0.61, best match: Isocortex L5 large Pyr
match value: 0.61, best match: L5 Isocortex Pyr
match value: 0.61, best match: Isocortex L5 Pyr
match value: 0.59, best match: ORB L5 large Pyr
match value: 0.59, best match: VIS L5 R S tall Pyr
match value: 0.59, best match: VIS L5 B tall Pyr
match value: 0.59, best match: VIS L5 R S short Pyr
match value: 0.59, best match: MOp L5 CThal Pyr
match value: 0.59, best match: MOp L5 CSp Pyr
match value: 0.59, best match: MOp L5 CCo Pyr
match value: 0.59, best match: MOp L5 CStr Pyr


target name -> BLA Pyr Thy1-YFP
match value: 0.67, best match: R S , L5 Pyr of SS  YFP Thy1-YFP
match value: 0.56, best match: BLA Pyr
match value: 0.56, best match: BLA Pyr
match value: 0.56, best match: BLA Pyr
match value: 0.56, best match: BLA Pyr
match value: 0.56, best match: BLA Pyr
match value: 0.56, best match: BLA Pyr
match value: 0.56, best match: BLA Pyr
match value: 0.56, best match: BLA Pyr
match value: 0.56, best match: BLA Pyr
match value: 0.56, best match: BLA Pyr
match value: 0.56, best match: BLA Pyr
match value: 0.44, best match: MV glu or gly YFP Thy1-YFP
match value: 0.44, best match: MV glu or gly YFP Thy1-YFP
match value: 0.44, best match: MV glu YFP Thy1-YFP
match value: 0.44, best match: MV gly YFP Thy1-YFP
match value: 0.44, best match: MV non- gaba Thy1 YFP Thy1-YFP
match value: 0.33, best match: BLA principal with input from ventral HIP
match value: 0.33, best match: BLA principal with input from ORB CTX
match value: 0.33, best match: BLA Pvalb Ac


target name -> CA1 Pyr Thy1-YFP
match value: 0.67, best match: R S , L5 Pyr of SS  YFP Thy1-YFP
match value: 0.56, best match: CA1 Pyr
match value: 0.56, best match: CA1 Pyr
match value: 0.56, best match: dorsal CA1 Pyr
match value: 0.56, best match: ventral CA1 Pyr
match value: 0.56, best match: CA1 and SUB R S Pyr
match value: 0.56, best match: CA1 and SUB B Pyr
match value: 0.56, best match: CA1 Pyr
match value: 0.56, best match: CA1 Pyr
match value: 0.56, best match: CA1 Pyr
match value: 0.56, best match: CA1 NF F S stratum oriens Pyr -like
match value: 0.56, best match: CA1 NF F S Pyr
match value: 0.56, best match: CA1 Pyr
match value: 0.56, best match: CA1 Pyr
match value: 0.56, best match: CA1 Pyr
match value: 0.56, best match: CA1 Pyr
match value: 0.56, best match: CA1 Pyr
match value: 0.56, best match: CA1 Pyr
match value: 0.56, best match: CA1 Pyr
match value: 0.56, best match: CA1 Pyr


target name -> LA glu GAD65-GFP
match value: 0.44, best match: lateral HY GFP L S GFP GAD65-GFP
match value: 0.44, best match: lateral HY GFP R S GFP GAD65-GFP
match value: 0.44, best match: lateral HY GFP LT S GFP GAD65-GFP
match value: 0.44, best match: lateral HY GFP F S GFP GAD65-GFP
match value: 0.44, best match: DG basket GFP GAD65-GFP
match value: 0.44, best match: DG basket GFP GAD65-GFP
match value: 0.44, best match: CA1 basket GFP GAD65-GFP
match value: 0.44, best match: CA1 basket GFP GAD65-GFP
match value: 0.44, best match: CA1 oriens lacunosum moleculare Schaffer collateral-associated GFP GAD65-GFP
match value: 0.44, best match: MOB (main) periglomerular GFP GAD65-GFP
match value: 0.33, best match: LA projection
match value: 0.33, best match: Central LA F S
match value: 0.33, best match: Central LA Low-Threshold B
match value: 0.33, best match: Central LA Late S
match value: 0.33, best match: Central LA R S
match value: 0.25, best match: BLA principal with input from ventral HIP
match value: 0.25, best match: BLA principal with input from ORB CTX
match value: 0.25, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.25, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.25, best match: ventral HIP stimulated F S in BLA sAMY


target name -> ACA Vip I S GAD65-GFP
match value: 0.44, best match: lateral HY GFP L S GFP GAD65-GFP
match value: 0.44, best match: lateral HY GFP R S GFP GAD65-GFP
match value: 0.44, best match: lateral HY GFP LT S GFP GAD65-GFP
match value: 0.44, best match: lateral HY GFP F S GFP GAD65-GFP
match value: 0.44, best match: DG basket GFP GAD65-GFP
match value: 0.44, best match: DG basket GFP GAD65-GFP
match value: 0.44, best match: CA1 basket GFP GAD65-GFP
match value: 0.44, best match: CA1 basket GFP GAD65-GFP
match value: 0.44, best match: CA1 oriens lacunosum moleculare Schaffer collateral-associated GFP GAD65-GFP
match value: 0.44, best match: MOB (main) periglomerular GFP GAD65-GFP
match value: 0.33, best match: anterior ACA L2-3 Pyr
match value: 0.33, best match: anterior ACA L6 Pyr
match value: 0.33, best match: anterior ACA L5 Pyr
match value: 0.33, best match: anterior ACA Pyr receiving inputs from TH
match value: 0.29, best match: Isocortex basket
match value: 0.29, best match: Isocortex L4 stellate
match value: 0.29, best match: Isocortex L2-3 LT S
match value: 0.29, best match: Isocortex L5 Pyr
match value: 0.29, best match: Isocortex basket
match value: 0.29, best match: Isocortex basket


target name -> SS Vip I S GAD65-GFP
match value: 0.44, best match: lateral HY GFP L S GFP GAD65-GFP
match value: 0.44, best match: lateral HY GFP R S GFP GAD65-GFP
match value: 0.44, best match: lateral HY GFP LT S GFP GAD65-GFP
match value: 0.44, best match: lateral HY GFP F S GFP GAD65-GFP
match value: 0.44, best match: DG basket GFP GAD65-GFP
match value: 0.44, best match: DG basket GFP GAD65-GFP
match value: 0.44, best match: CA1 basket GFP GAD65-GFP
match value: 0.44, best match: CA1 basket GFP GAD65-GFP
match value: 0.44, best match: CA1 oriens lacunosum moleculare Schaffer collateral-associated GFP GAD65-GFP
match value: 0.44, best match: MOB (main) periglomerular GFP GAD65-GFP
match value: 0.33, best match: SS L5b Pyr
match value: 0.33, best match: R S , L5 Pyr of SS  YFP Thy1-YFP
match value: 0.33, best match: SS L2-3 inhibitory GIN GIN
match value: 0.33, best match: SS L2-3 inhibitory GIN GIN
match value: 0.33, best match: SS L2-3 R S Pyr GIN GIN
match value: 0.33, best match: SS L2-3 R S Pyr GIN GIN
match value: 0.33, best match: SS L4 fusiform gaba Sst
match value: 0.33, best match: SS L4 gaba Pvalb
match value: 0.33, best match: SS gaba L4 Calb2
match value: 0.33, best match: SS L5 LT S


target name -> ACA Ad GIN
match value: 0.89, best match: SS L2-3 inhibitory GIN GIN
match value: 0.89, best match: SS L2-3 inhibitory GIN GIN
match value: 0.89, best match: SS L2-3 R S Pyr GIN GIN
match value: 0.89, best match: SS L2-3 R S Pyr GIN GIN
match value: 0.89, best match: ORB L2-3 GIN GIN
match value: 0.89, best match: SS L2-3 GIN GIN
match value: 0.89, best match: SSp-bfd gaba GIN GIN
match value: 0.89, best match: MO L2-3 group 1 GIN GIN
match value: 0.89, best match: MO L2-3 group 2 GIN GIN
match value: 0.89, best match: MO L2-3 group 4 GIN GIN
match value: 0.89, best match: MO L2-3 group 3 GIN GIN
match value: 0.57, best match: DG GIN GIN
match value: 0.57, best match: CA1 stratum oriens R S GIN GIN
match value: 0.57, best match: CA1 stratum oriens I S GIN GIN
match value: 0.57, best match: CA1 stratum oriens clustered S GIN GIN
match value: 0.57, best match: MV gaba GIN GIN
match value: 0.57, best match: MV gaba GIN GIN
match value: 0.57, best match: MV non- gly GIN GIN
match value: 0.57, best match: MV gly GIN GIN
match value: 0.57, best match: MV gaba GIN GIN


target name -> HIP Ad GIN
match value: 0.95, best match: DG GIN GIN
match value: 0.95, best match: CA1 stratum oriens R S GIN GIN
match value: 0.95, best match: CA1 stratum oriens I S GIN GIN
match value: 0.95, best match: CA1 stratum oriens clustered S GIN GIN
match value: 0.57, best match: SS L2-3 inhibitory GIN GIN
match value: 0.57, best match: SS L2-3 inhibitory GIN GIN
match value: 0.57, best match: SS L2-3 R S Pyr GIN GIN
match value: 0.57, best match: SS L2-3 R S Pyr GIN GIN
match value: 0.57, best match: ORB L2-3 GIN GIN
match value: 0.57, best match: SS L2-3 GIN GIN
match value: 0.57, best match: MV gaba GIN GIN
match value: 0.57, best match: MV gaba GIN GIN
match value: 0.57, best match: MV non- gly GIN GIN
match value: 0.57, best match: MV gly GIN GIN
match value: 0.57, best match: MV gaba GIN GIN
match value: 0.57, best match: NTS 67 expressing GIN GIN
match value: 0.57, best match: SSp-bfd gaba GIN GIN
match value: 0.57, best match: MO L2-3 group 1 GIN GIN
match value: 0.57, best match: MO L2-3 group 2 GIN GIN
match value: 0.57, best match: MO L2-3 group 4 GIN GIN


target name -> ACA F S basket G42
match value: 0.69, best match: ORB L5 F S GFP-expressing G42 G42
match value: 0.69, best match: AUD L2-3 F S G42 G42
match value: 0.69, best match: AUD L2-3 F S G42 G42
match value: 0.69, best match: AUD L2-3 F S G42 G42
match value: 0.69, best match: SSp-bfd L4 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: L5 SS F S G42 G42
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket


target name -> TH LGd gaba G42
match value: 0.51, best match: dorsal RT atypical B gaba inhibitory
match value: 0.51, best match: ventral RT typical B gaba inhibitory
match value: 0.51, best match: dorsal RT non B gaba inhibitory
match value: 0.44, best match: ORB L5 F S GFP-expressing G42 G42
match value: 0.44, best match: AUD L2-3 F S G42 G42
match value: 0.44, best match: AUD L2-3 F S G42 G42
match value: 0.44, best match: AUD L2-3 F S G42 G42
match value: 0.44, best match: SSp-bfd L4 F S G42 G42
match value: 0.44, best match: VIS L5-6 F S G42 G42
match value: 0.44, best match: VIS L5-6 F S G42 G42
match value: 0.44, best match: VIS L5-6 F S G42 G42
match value: 0.44, best match: VIS L5-6 F S G42 G42
match value: 0.44, best match: L5 SS F S G42 G42
match value: 0.33, best match: TH relay
match value: 0.33, best match: TH PF
match value: 0.33, best match: TH relay
match value: 0.33, best match: TH lateral PF bushy
match value: 0.33, best match: TH lateral PF  diffuse
match value: 0.33, best match: TH PF
match value: 0.33, best match: TH relay


target name -> SS F S basket G42
match value: 0.78, best match: L5 SS F S G42 G42
match value: 0.74, best match: SSp-bfd L4 F S G42 G42
match value: 0.69, best match: ORB L5 F S GFP-expressing G42 G42
match value: 0.69, best match: AUD L2-3 F S G42 G42
match value: 0.69, best match: AUD L2-3 F S G42 G42
match value: 0.69, best match: AUD L2-3 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket


target name -> SS F S basket G42
match value: 0.78, best match: L5 SS F S G42 G42
match value: 0.74, best match: SSp-bfd L4 F S G42 G42
match value: 0.69, best match: ORB L5 F S GFP-expressing G42 G42
match value: 0.69, best match: AUD L2-3 F S G42 G42
match value: 0.69, best match: AUD L2-3 F S G42 G42
match value: 0.69, best match: AUD L2-3 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket


target name -> SS F S basket G42
match value: 0.78, best match: L5 SS F S G42 G42
match value: 0.74, best match: SSp-bfd L4 F S G42 G42
match value: 0.69, best match: ORB L5 F S GFP-expressing G42 G42
match value: 0.69, best match: AUD L2-3 F S G42 G42
match value: 0.69, best match: AUD L2-3 F S G42 G42
match value: 0.69, best match: AUD L2-3 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket


target name -> SS F S basket G42
match value: 0.78, best match: L5 SS F S G42 G42
match value: 0.74, best match: SSp-bfd L4 F S G42 G42
match value: 0.69, best match: ORB L5 F S GFP-expressing G42 G42
match value: 0.69, best match: AUD L2-3 F S G42 G42
match value: 0.69, best match: AUD L2-3 F S G42 G42
match value: 0.69, best match: AUD L2-3 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket


target name -> MO F S basket G42
match value: 0.69, best match: ORB L5 F S GFP-expressing G42 G42
match value: 0.69, best match: AUD L2-3 F S G42 G42
match value: 0.69, best match: AUD L2-3 F S G42 G42
match value: 0.69, best match: AUD L2-3 F S G42 G42
match value: 0.69, best match: SSp-bfd L4 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: L5 SS F S G42 G42
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> CB Purkinje
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB VERM II-VIII lobules Purkinje
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB Purkinje
match value: 1.00, best match: CB Purkinje
match value: 0.93, best match: Densely Purkinje innerverted, FL targeting, gly
match value: 0.60, best match: CB granule
match value: 0.60, best match: CB Golgi
match value: 0.60, best match: CB granule


target name -> MO L5 Pyr
match value: 1.00, best match: L5 MO Pyr
match value: 0.96, best match: MOp L5 CThal Pyr
match value: 0.96, best match: MOp L5 CSp Pyr
match value: 0.96, best match: MOp L5 CCo Pyr
match value: 0.96, best match: MOp L5 CStr Pyr
match value: 0.96, best match: Isocortex L5 Pyr
match value: 0.96, best match: Isocortex L5 large Pyr
match value: 0.96, best match: L5 Isocortex Pyr
match value: 0.96, best match: Isocortex L5 Pyr
match value: 0.93, best match: ORB L5 large Pyr
match value: 0.93, best match: VIS L5 R S tall Pyr
match value: 0.93, best match: VIS L5 B tall Pyr
match value: 0.93, best match: VIS L5 R S short Pyr
match value: 0.93, best match: L5 frontal Pyr projecting PERI CTX 
match value: 0.93, best match: R S , L5 Pyr of SS  YFP Thy1-YFP
match value: 0.93, best match: SS L5 apical Pyr
match value: 0.93, best match: SS L5 apical Pyr
match value: 0.93, best match: ORB L5 Pyr
match value: 0.93, best match: L5 VIS large TT Pyr
match value: 0.93, best match: SS L5 Pyr


target name -> SSp L5 Pyr
match value: 1.00, best match: SSp L5 CThal projecting Pyr
match value: 1.00, best match: SSp L5 CTrig projecting Pyr
match value: 1.00, best match: SSp L5 CStr projecting Pyr
match value: 1.00, best match: SSp L5 CCo projecting Pyr
match value: 1.00, best match: SSp L5 Pyr
match value: 0.96, best match: R S , L5 Pyr of SS  YFP Thy1-YFP
match value: 0.96, best match: SS L5 apical Pyr
match value: 0.96, best match: SS L5 apical Pyr
match value: 0.96, best match: Isocortex L5 Pyr
match value: 0.96, best match: SS L5 Pyr
match value: 0.96, best match: Isocortex L5 large Pyr
match value: 0.96, best match: L5 SS large amplitude Pyr
match value: 0.96, best match: L5 SS small amplitude Pyr
match value: 0.96, best match: L5 somatosensory SSp-bfd Pyr
match value: 0.96, best match: SS L5 TT Pyr
match value: 0.96, best match: SS L5 corticocallosal projecting Pyr
match value: 0.96, best match: SS L5 Pyr
match value: 0.96, best match: SS L5 Pyr gaba
match value: 0.96, best match: L5 Isocortex Pyr
match value: 0.96, best match: Isocortex L5 Pyr


target name -> SNc DA
match value: 1.00, best match: SNc DA
match value: 1.00, best match: SNc DA
match value: 1.00, best match: SNc DA
match value: 1.00, best match: SNc DA
match value: 1.00, best match: SNc DA
match value: 1.00, best match: SNc DA
match value: 1.00, best match: SNc DA Calb1
match value: 1.00, best match: SNc DA
match value: 1.00, best match: SNc DA
match value: 1.00, best match: SNc DA
match value: 1.00, best match: SNc DA
match value: 0.85, best match: VTA DA
match value: 0.85, best match: VTA DA
match value: 0.85, best match: VTA DA
match value: 0.85, best match: VTA DA
match value: 0.85, best match: VTA DA
match value: 0.85, best match: VTA DA
match value: 0.85, best match: VTA DA
match value: 0.85, best match: VTA DA
match value: 0.85, best match: VTA DA Calb1


target name -> VTA DA
match value: 1.00, best match: VTA DA
match value: 1.00, best match: VTA DA
match value: 1.00, best match: VTA DA
match value: 1.00, best match: VTA DA
match value: 1.00, best match: VTA DA
match value: 1.00, best match: VTA DA
match value: 1.00, best match: VTA DA
match value: 1.00, best match: VTA DA
match value: 1.00, best match: VTA DA Calb1
match value: 1.00, best match: VTA DA
match value: 0.85, best match: SNc DA
match value: 0.85, best match: SNc DA
match value: 0.85, best match: SNc DA
match value: 0.85, best match: SNc DA
match value: 0.85, best match: SNc DA
match value: 0.85, best match: SNc DA
match value: 0.85, best match: SNc DA Calb1
match value: 0.85, best match: SNc DA
match value: 0.85, best match: SNc DA
match value: 0.85, best match: SNc DA


target name -> MO L5 TT Pyr Thy1-YFP
match value: 0.83, best match: R S , L5 Pyr of SS  YFP Thy1-YFP
match value: 0.71, best match: L5 VIS large TT Pyr
match value: 0.71, best match: SS L5 TT Pyr
match value: 0.65, best match: MOp L5b CSp TT large Pyr
match value: 0.65, best match: MOp L5b CSp TT large Pyr
match value: 0.65, best match: MOp L5b CSp TT large Pyr
match value: 0.63, best match: L5 MO Pyr
match value: 0.63, best match: SSs L5b CSp TT large Pyr
match value: 0.61, best match: MOp L5 CThal Pyr
match value: 0.61, best match: MOp L5 CSp Pyr
match value: 0.61, best match: MOp L5 CCo Pyr
match value: 0.61, best match: MOp L5 CStr Pyr
match value: 0.61, best match: Isocortex L5 Pyr
match value: 0.61, best match: Isocortex L5 large Pyr
match value: 0.61, best match: L5 Isocortex Pyr
match value: 0.61, best match: Isocortex L5 Pyr
match value: 0.59, best match: ORB L5 large Pyr
match value: 0.59, best match: VIS L5 R S tall Pyr
match value: 0.59, best match: VIS L5 B tall Pyr
match value: 0.59, best match: VIS L5 R S short Pyr


target name -> LC Th NAdr
match value: 0.71, best match: LC NAdr
match value: 0.71, best match: LC NAdr
match value: 0.71, best match: LC NAdr
match value: 0.43, best match: LC neuropeptide S expressing
match value: 0.43, best match: LC
match value: 0.32, best match: BLA principal with input from ORB CTX
match value: 0.32, best match: SOCm ventral
match value: 0.32, best match: SOCm dorsal
match value: 0.32, best match: SOCm ventral
match value: 0.32, best match: SOCm dorsal
match value: 0.32, best match: SUB Pyr projecting to RSP CTX
match value: 0.32, best match: SUB Pyr projecting to lateral entorhinal cortex CTX
match value: 0.32, best match: SUB Pyr projecting to medial entorhinal cortex CTX
match value: 0.32, best match: SUB Pyr projecting to ORB CTX
match value: 0.32, best match: L2-3 frontal Pyr projecting PERI CTX
match value: 0.32, best match: L5 frontal Pyr projecting PERI CTX 
match value: 0.32, best match: medial entorihinal CTX L2 stellate
match value: 0.32, best match: medial entorihinal CTX L2 stellate
match value: 0.32, best match: jcBNST bed nucleus st type 2
match value: 0.32, best match: jcBNST bed nucleus st type 3


target name -> CB Purkinje G42
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB VERM II-VIII lobules Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.51, best match: Densely Purkinje innerverted, FL targeting, gly
match value: 0.44, best match: ORB L5 F S GFP-expressing G42 G42
match value: 0.44, best match: AUD L2-3 F S G42 G42
match value: 0.44, best match: AUD L2-3 F S G42 G42


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> DG granule
match value: 1.00, best match: DG granule
match value: 1.00, best match: DG granule
match value: 1.00, best match: DG granule
match value: 1.00, best match: DG granule
match value: 1.00, best match: DG granule
match value: 1.00, best match: DG granule
match value: 1.00, best match: DG granule
match value: 1.00, best match: DG granule
match value: 1.00, best match: DG granule
match value: 1.00, best match: DG granule
match value: 1.00, best match: DG granule
match value: 1.00, best match: DG granule
match value: 1.00, best match: DG granule
match value: 1.00, best match: DG granule
match value: 1.00, best match: DG granule
match value: 1.00, best match: DG granule
match value: 1.00, best match: DG granule
match value: 1.00, best match: DG granule
match value: 1.00, best match: DG granule
match value: 1.00, best match: DG granule


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> CP Drd1 medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium -sized spiny projection
match value: 0.71, best match: CP medium -sized spiny projection
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny gaba
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny


target name -> CP Drd1 medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium -sized spiny projection
match value: 0.71, best match: CP medium -sized spiny projection
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny gaba
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny


target name -> CP Drd1 medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium -sized spiny projection
match value: 0.71, best match: CP medium -sized spiny projection
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny gaba
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny


target name -> CP Drd2 medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium -sized spiny projection
match value: 0.71, best match: CP medium -sized spiny projection
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny gaba
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny


target name -> CP Drd2 medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium -sized spiny projection
match value: 0.71, best match: CP medium -sized spiny projection
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny gaba
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny
match value: 0.71, best match: CP medium spiny


target name -> Isocortex L5b Colgalt2 TT Pyr
match value: 0.83, best match: SSs L5b CSp TT large Pyr
match value: 0.83, best match: MOp L5b CSp TT large Pyr
match value: 0.83, best match: MOp L5b CSp TT large Pyr
match value: 0.83, best match: MOp L5b CSp TT large Pyr
match value: 0.77, best match: L5 VIS large TT Pyr
match value: 0.77, best match: SS L5 TT Pyr
match value: 0.68, best match: SS L5b Pyr
match value: 0.68, best match: SSp-bfd Pyr L5b
match value: 0.68, best match: L5b SS barrel column extensive tuft Pyr
match value: 0.68, best match: primary somatosensory SSp-bfd L5b Pyr R S
match value: 0.68, best match: primary somatosensory SSp-bfd L5b Pyr I B
match value: 0.68, best match: somatosensory SSp-bfd L5b Pyr
match value: 0.65, best match: Isocortex L5 Pyr
match value: 0.65, best match: Isocortex L5 large Pyr
match value: 0.65, best match: L5 Isocortex Pyr
match value: 0.65, best match: Isocortex L5 Pyr
match value: 0.62, best match: ORB L5 large Pyr
match value: 0.62, best match: VIS L5 R S tall Pyr
match value: 0.62, best match: VIS L5 B tall Pyr
match value: 0.62, best match: VIS L5 R S short Pyr


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> HY Hcrt
match value: 1.00, best match: HY Hcrt with hyperpolarizing post- inhibitory rebound
match value: 1.00, best match: HY Hcrt with depolarizing post- inhibitory rebound
match value: 0.60, best match: lateral HY GFP L S GFP GAD65-GFP
match value: 0.60, best match: lateral HY GFP R S GFP GAD65-GFP
match value: 0.60, best match: lateral HY GFP LT S GFP GAD65-GFP
match value: 0.60, best match: lateral HY GFP F S GFP GAD65-GFP
match value: 0.60, best match: HY gonadotropin-releasing hormone
match value: 0.60, best match: HY Oxt neuroendocrine magnocellular
match value: 0.53, best match: SUB Pyr projecting to ventromedial HY
match value: 0.53, best match: STN
match value: 0.53, best match: SCH Grp Calb1
match value: 0.53, best match: SCH Grp Calb1
match value: 0.53, best match: SCH Grp Calb1
match value: 0.53, best match: hypothalamic SBPV receiving inputs from SCH
match value: 0.53, best match: PVH
match value: 0.53, best match: SO Oxt
match value: 0.53, best match: SCH
match value: 0.53, best match: SCH
match value: 0.53, best match: SCH
match value: 0.53, best match: PVH


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> CB Purkinje G42
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB VERM II-VIII lobules Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.51, best match: Densely Purkinje innerverted, FL targeting, gly
match value: 0.44, best match: ORB L5 F S GFP-expressing G42 G42
match value: 0.44, best match: AUD L2-3 F S G42 G42
match value: 0.44, best match: AUD L2-3 F S G42 G42


target name -> CB Purkinje G42
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB VERM II-VIII lobules Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.51, best match: Densely Purkinje innerverted, FL targeting, gly
match value: 0.44, best match: ORB L5 F S GFP-expressing G42 G42
match value: 0.44, best match: AUD L2-3 F S G42 G42
match value: 0.44, best match: AUD L2-3 F S G42 G42


target name -> CB Purkinje G42
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB VERM II-VIII lobules Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.51, best match: Densely Purkinje innerverted, FL targeting, gly
match value: 0.44, best match: ORB L5 F S GFP-expressing G42 G42
match value: 0.44, best match: AUD L2-3 F S G42 G42
match value: 0.44, best match: AUD L2-3 F S G42 G42


target name -> CB Purkinje G42
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB VERM II-VIII lobules Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.51, best match: Densely Purkinje innerverted, FL targeting, gly
match value: 0.44, best match: ORB L5 F S GFP-expressing G42 G42
match value: 0.44, best match: AUD L2-3 F S G42 G42
match value: 0.44, best match: AUD L2-3 F S G42 G42


target name -> CB Purkinje G42
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB VERM II-VIII lobules Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.51, best match: Densely Purkinje innerverted, FL targeting, gly
match value: 0.44, best match: ORB L5 F S GFP-expressing G42 G42
match value: 0.44, best match: AUD L2-3 F S G42 G42
match value: 0.44, best match: AUD L2-3 F S G42 G42


target name -> CB Purkinje G42
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB VERM II-VIII lobules Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.51, best match: Densely Purkinje innerverted, FL targeting, gly
match value: 0.44, best match: ORB L5 F S GFP-expressing G42 G42
match value: 0.44, best match: AUD L2-3 F S G42 G42
match value: 0.44, best match: AUD L2-3 F S G42 G42


target name -> CB Purkinje G42
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB VERM II-VIII lobules Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.56, best match: CB Purkinje
match value: 0.51, best match: Densely Purkinje innerverted, FL targeting, gly
match value: 0.44, best match: ORB L5 F S GFP-expressing G42 G42
match value: 0.44, best match: AUD L2-3 F S G42 G42
match value: 0.44, best match: AUD L2-3 F S G42 G42


target name -> CB Pcp2 Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB VERM II-VIII lobules Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.66, best match: Densely Purkinje innerverted, FL targeting, gly
match value: 0.43, best match: CB granule
match value: 0.43, best match: CB Golgi
match value: 0.43, best match: CB granule


target name -> CB Pcp2 Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB VERM II-VIII lobules Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.66, best match: Densely Purkinje innerverted, FL targeting, gly
match value: 0.43, best match: CB granule
match value: 0.43, best match: CB Golgi
match value: 0.43, best match: CB granule


target name -> CB Pcp2 Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB VERM II-VIII lobules Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.66, best match: Densely Purkinje innerverted, FL targeting, gly
match value: 0.43, best match: CB granule
match value: 0.43, best match: CB Golgi
match value: 0.43, best match: CB granule


target name -> Isocortex L5a S100a10 CStr ST Pyr
match value: 0.76, best match: MOp L5 CStr Pyr
match value: 0.76, best match: SSp L5 CStr projecting Pyr
match value: 0.58, best match: MOp CStr Pyr
match value: 0.43, best match: SSp-bfd Pyr L5a
match value: 0.43, best match: L5a SS barrel column small tuft Pyr
match value: 0.43, best match: L5a somatosensory SSp-bfd Pyr
match value: 0.43, best match: L5a somatosensory SSp-bfd Pyr
match value: 0.43, best match: L5a somatosensory SSp-bfd Pyr
match value: 0.43, best match: primary somatosensory SSp-bfd L5a Pyr
match value: 0.43, best match: somatosensory SSp-bfd L5a Pyr
match value: 0.41, best match: Isocortex L5 Pyr
match value: 0.41, best match: Isocortex L5 large Pyr
match value: 0.41, best match: L5 Isocortex Pyr
match value: 0.41, best match: Isocortex L5 Pyr
match value: 0.40, best match: ORB L5 large Pyr
match value: 0.40, best match: VIS L5 R S tall Pyr
match value: 0.40, best match: VIS L5 B tall Pyr
match value: 0.40, best match: VIS L5 R S short Pyr
match value: 0.40, best match: MOp L5 CThal Pyr
match value: 0.40, best match: MOp L5 CSp Pyr


target name -> MB Slc6a4 5HT
match value: 0.66, best match: ventral wing 5HT of DR raphe
match value: 0.66, best match: lateral wing of 5HT DR
match value: 0.66, best match: ventromedial DR 5HT
match value: 0.66, best match: DR 5HT
match value: 0.66, best match: DR 5HT
match value: 0.66, best match: DR 5HT projection
match value: 0.38, best match: SNc DA
match value: 0.38, best match: SNr gaba
match value: 0.38, best match: VTA DA
match value: 0.38, best match: SNc DA
match value: 0.38, best match: SNr gaba
match value: 0.38, best match: SNc DA
match value: 0.38, best match: SNr gaba
match value: 0.38, best match: SNc DA
match value: 0.38, best match: SNc DA
match value: 0.38, best match: IC
match value: 0.38, best match: IV
match value: 0.38, best match: IC
match value: 0.38, best match: ventromedial DR N5HT
match value: 0.38, best match: VTA DA


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> CB stellate and basket G42
match value: 0.36, best match: ORB L5 F S GFP-expressing G42 G42
match value: 0.36, best match: AUD L2-3 F S G42 G42
match value: 0.36, best match: AUD L2-3 F S G42 G42
match value: 0.36, best match: AUD L2-3 F S G42 G42
match value: 0.36, best match: SSp-bfd L4 F S G42 G42
match value: 0.36, best match: VIS L5-6 F S G42 G42
match value: 0.36, best match: VIS L5-6 F S G42 G42
match value: 0.36, best match: VIS L5-6 F S G42 G42
match value: 0.36, best match: VIS L5-6 F S G42 G42
match value: 0.36, best match: L5 SS F S G42 G42
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB granule
match value: 0.27, best match: CB Golgi
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje


target name -> CB stellate and basket G42
match value: 0.36, best match: ORB L5 F S GFP-expressing G42 G42
match value: 0.36, best match: AUD L2-3 F S G42 G42
match value: 0.36, best match: AUD L2-3 F S G42 G42
match value: 0.36, best match: AUD L2-3 F S G42 G42
match value: 0.36, best match: SSp-bfd L4 F S G42 G42
match value: 0.36, best match: VIS L5-6 F S G42 G42
match value: 0.36, best match: VIS L5-6 F S G42 G42
match value: 0.36, best match: VIS L5-6 F S G42 G42
match value: 0.36, best match: VIS L5-6 F S G42 G42
match value: 0.36, best match: L5 SS F S G42 G42
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB granule
match value: 0.27, best match: CB Golgi
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje


target name -> CB stellate and basket G42
match value: 0.36, best match: ORB L5 F S GFP-expressing G42 G42
match value: 0.36, best match: AUD L2-3 F S G42 G42
match value: 0.36, best match: AUD L2-3 F S G42 G42
match value: 0.36, best match: AUD L2-3 F S G42 G42
match value: 0.36, best match: SSp-bfd L4 F S G42 G42
match value: 0.36, best match: VIS L5-6 F S G42 G42
match value: 0.36, best match: VIS L5-6 F S G42 G42
match value: 0.36, best match: VIS L5-6 F S G42 G42
match value: 0.36, best match: VIS L5-6 F S G42 G42
match value: 0.36, best match: L5 SS F S G42 G42
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB granule
match value: 0.27, best match: CB Golgi
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje


target name -> CB stellate and basket G42
match value: 0.36, best match: ORB L5 F S GFP-expressing G42 G42
match value: 0.36, best match: AUD L2-3 F S G42 G42
match value: 0.36, best match: AUD L2-3 F S G42 G42
match value: 0.36, best match: AUD L2-3 F S G42 G42
match value: 0.36, best match: SSp-bfd L4 F S G42 G42
match value: 0.36, best match: VIS L5-6 F S G42 G42
match value: 0.36, best match: VIS L5-6 F S G42 G42
match value: 0.36, best match: VIS L5-6 F S G42 G42
match value: 0.36, best match: VIS L5-6 F S G42 G42
match value: 0.36, best match: L5 SS F S G42 G42
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB granule
match value: 0.27, best match: CB Golgi
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje


target name -> CB stellate and basket G42
match value: 0.36, best match: ORB L5 F S GFP-expressing G42 G42
match value: 0.36, best match: AUD L2-3 F S G42 G42
match value: 0.36, best match: AUD L2-3 F S G42 G42
match value: 0.36, best match: AUD L2-3 F S G42 G42
match value: 0.36, best match: SSp-bfd L4 F S G42 G42
match value: 0.36, best match: VIS L5-6 F S G42 G42
match value: 0.36, best match: VIS L5-6 F S G42 G42
match value: 0.36, best match: VIS L5-6 F S G42 G42
match value: 0.36, best match: VIS L5-6 F S G42 G42
match value: 0.36, best match: L5 SS F S G42 G42
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB granule
match value: 0.27, best match: CB Golgi
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje
match value: 0.27, best match: CB Purkinje


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> MH Chat
match value: 0.53, best match: TH relay
match value: 0.53, best match: TH PF
match value: 0.53, best match: TH relay
match value: 0.53, best match: TH lateral PF bushy
match value: 0.53, best match: TH lateral PF  diffuse
match value: 0.53, best match: TH PF
match value: 0.53, best match: TH relay
match value: 0.53, best match: TH Nucleus Ventralis Basalis Nucleus Ventralis Basalis relay
match value: 0.53, best match: TH relay
match value: 0.53, best match: TH relay
match value: 0.53, best match: TH relay
match value: 0.53, best match: TH relay
match value: 0.53, best match: TH relay
match value: 0.53, best match: TH relay
match value: 0.53, best match: TH relay
match value: 0.53, best match: TH relay
match value: 0.45, best match: RT
match value: 0.45, best match: RT
match value: 0.45, best match: dorsal RT atypical B gaba inhibitory
match value: 0.45, best match: ventral RT typical B gaba inhibitory


target name -> Isocortex Oxtr
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex L4 stellate
match value: 0.60, best match: Isocortex L2-3 LT S
match value: 0.60, best match: Isocortex L5 Pyr
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex L4 stellate
match value: 0.60, best match: Isocortex L4 stellate
match value: 0.60, best match: Isocortex L5 large Pyr
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex Pyr L2-3
match value: 0.60, best match: Isocortex Pyr L2-3
match value: 0.60, best match: Isocortex Pyr L5-6
match value: 0.60, best match: Isocortex L2-3 gaba L S subtype 1 Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba L NF F S Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba L S subtype 2 Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba B NAd Ad subtype 2 Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba F Ad Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba B NAd Ad subtype 1 Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba I S bipolar Htr3a


target name -> Isocortex Htr3a
match value: 1.00, best match: Isocortex L2-3 gaba L S subtype 1 Htr3a
match value: 1.00, best match: Isocortex L2-3 gaba L NF F S Htr3a
match value: 1.00, best match: Isocortex L2-3 gaba L S subtype 2 Htr3a
match value: 1.00, best match: Isocortex L2-3 gaba B NAd Ad subtype 2 Htr3a
match value: 1.00, best match: Isocortex L2-3 gaba F Ad Htr3a
match value: 1.00, best match: Isocortex L2-3 gaba B NAd Ad subtype 1 Htr3a
match value: 1.00, best match: Isocortex L2-3 gaba I S bipolar Htr3a
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex L4 stellate
match value: 0.60, best match: Isocortex L2-3 LT S
match value: 0.60, best match: Isocortex L5 Pyr
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex L4 stellate
match value: 0.60, best match: Isocortex L4 stellate
match value: 0.60, best match: Isocortex L5 large Pyr
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex Pyr L2-3
match value: 0.60, best match: Isocortex Pyr L2-3
match value: 0.60, best match: Isocortex Pyr L5-6


target name -> MO L5 CSp Pyr
match value: 0.98, best match: MOp L5 CSp Pyr
match value: 0.91, best match: MOp L5b CSp TT large Pyr
match value: 0.91, best match: MOp L5b CSp TT large Pyr
match value: 0.91, best match: MOp L5b CSp TT large Pyr
match value: 0.89, best match: SSs L5b CSp TT large Pyr
match value: 0.69, best match: MOp CSp Pyr
match value: 0.56, best match: L5 MO Pyr
match value: 0.55, best match: secondary motor cortex CSp Pyr
match value: 0.54, best match: MOp L5 CThal Pyr
match value: 0.54, best match: MOp L5 CCo Pyr
match value: 0.54, best match: MOp L5 CStr Pyr
match value: 0.54, best match: Isocortex L5 Pyr
match value: 0.54, best match: Isocortex L5 large Pyr
match value: 0.54, best match: L5 Isocortex Pyr
match value: 0.54, best match: Isocortex L5 Pyr
match value: 0.52, best match: ORB L5 large Pyr
match value: 0.52, best match: VIS L5 R S tall Pyr
match value: 0.52, best match: VIS L5 B tall Pyr
match value: 0.52, best match: VIS L5 R S short Pyr
match value: 0.52, best match: L5 frontal Pyr projecting PERI CTX 


target name -> MO L5 CSp Pyr
match value: 0.98, best match: MOp L5 CSp Pyr
match value: 0.91, best match: MOp L5b CSp TT large Pyr
match value: 0.91, best match: MOp L5b CSp TT large Pyr
match value: 0.91, best match: MOp L5b CSp TT large Pyr
match value: 0.89, best match: SSs L5b CSp TT large Pyr
match value: 0.69, best match: MOp CSp Pyr
match value: 0.56, best match: L5 MO Pyr
match value: 0.55, best match: secondary motor cortex CSp Pyr
match value: 0.54, best match: MOp L5 CThal Pyr
match value: 0.54, best match: MOp L5 CCo Pyr
match value: 0.54, best match: MOp L5 CStr Pyr
match value: 0.54, best match: Isocortex L5 Pyr
match value: 0.54, best match: Isocortex L5 large Pyr
match value: 0.54, best match: L5 Isocortex Pyr
match value: 0.54, best match: Isocortex L5 Pyr
match value: 0.52, best match: ORB L5 large Pyr
match value: 0.52, best match: VIS L5 R S tall Pyr
match value: 0.52, best match: VIS L5 B tall Pyr
match value: 0.52, best match: VIS L5 R S short Pyr
match value: 0.52, best match: L5 frontal Pyr projecting PERI CTX 


target name -> MO L5 CSp Pyr
match value: 0.98, best match: MOp L5 CSp Pyr
match value: 0.91, best match: MOp L5b CSp TT large Pyr
match value: 0.91, best match: MOp L5b CSp TT large Pyr
match value: 0.91, best match: MOp L5b CSp TT large Pyr
match value: 0.89, best match: SSs L5b CSp TT large Pyr
match value: 0.69, best match: MOp CSp Pyr
match value: 0.56, best match: L5 MO Pyr
match value: 0.55, best match: secondary motor cortex CSp Pyr
match value: 0.54, best match: MOp L5 CThal Pyr
match value: 0.54, best match: MOp L5 CCo Pyr
match value: 0.54, best match: MOp L5 CStr Pyr
match value: 0.54, best match: Isocortex L5 Pyr
match value: 0.54, best match: Isocortex L5 large Pyr
match value: 0.54, best match: L5 Isocortex Pyr
match value: 0.54, best match: Isocortex L5 Pyr
match value: 0.52, best match: ORB L5 large Pyr
match value: 0.52, best match: VIS L5 R S tall Pyr
match value: 0.52, best match: VIS L5 B tall Pyr
match value: 0.52, best match: VIS L5 R S short Pyr
match value: 0.52, best match: L5 frontal Pyr projecting PERI CTX 


target name -> VIS L5 CTect Pyr
match value: 0.56, best match: VIS L5 R S tall Pyr
match value: 0.56, best match: VIS L5 B tall Pyr
match value: 0.56, best match: VIS L5 R S short Pyr
match value: 0.56, best match: L5 VIS large TT Pyr
match value: 0.56, best match: VIS L5 R S Pyr
match value: 0.56, best match: VIS L5 B Pyr
match value: 0.56, best match: associative parietal and VIS L5 Pyr projecting to superior colliculus
match value: 0.56, best match: associative parietal and VIS L5 Pyr projecting to contralateral CTX
match value: 0.56, best match: associative parietal and VIS L5 Pyr projecting to contralateral CTX
match value: 0.56, best match: associative parietal and VIS L5 Pyr projecting to superior colliculus
match value: 0.54, best match: Isocortex L5 Pyr
match value: 0.54, best match: Isocortex L5 large Pyr
match value: 0.54, best match: L5 Isocortex Pyr
match value: 0.54, best match: Isocortex L5 Pyr
match value: 0.52, best match: ORB L5 large Pyr
match value: 0.52, best match: MOp L5 CThal Pyr
match value: 0.52, best match: MOp L5 CSp Pyr
match value: 0.52, best match: MOp L5 CCo Pyr
match value: 0.52, best match: MOp L5 CStr Pyr
match value: 0.52, best match: L5 frontal Pyr projecting PERI CTX 


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> MO L5 TT Pyr Thy1-YFP
match value: 0.83, best match: R S , L5 Pyr of SS  YFP Thy1-YFP
match value: 0.71, best match: L5 VIS large TT Pyr
match value: 0.71, best match: SS L5 TT Pyr
match value: 0.65, best match: MOp L5b CSp TT large Pyr
match value: 0.65, best match: MOp L5b CSp TT large Pyr
match value: 0.65, best match: MOp L5b CSp TT large Pyr
match value: 0.63, best match: L5 MO Pyr
match value: 0.63, best match: SSs L5b CSp TT large Pyr
match value: 0.61, best match: MOp L5 CThal Pyr
match value: 0.61, best match: MOp L5 CSp Pyr
match value: 0.61, best match: MOp L5 CCo Pyr
match value: 0.61, best match: MOp L5 CStr Pyr
match value: 0.61, best match: Isocortex L5 Pyr
match value: 0.61, best match: Isocortex L5 large Pyr
match value: 0.61, best match: L5 Isocortex Pyr
match value: 0.61, best match: Isocortex L5 Pyr
match value: 0.59, best match: ORB L5 large Pyr
match value: 0.59, best match: VIS L5 R S tall Pyr
match value: 0.59, best match: VIS L5 B tall Pyr
match value: 0.59, best match: VIS L5 R S short Pyr


target name -> MO F S basket G42
match value: 0.69, best match: ORB L5 F S GFP-expressing G42 G42
match value: 0.69, best match: AUD L2-3 F S G42 G42
match value: 0.69, best match: AUD L2-3 F S G42 G42
match value: 0.69, best match: AUD L2-3 F S G42 G42
match value: 0.69, best match: SSp-bfd L4 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: VIS L5-6 F S G42 G42
match value: 0.69, best match: L5 SS F S G42 G42
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket
match value: 0.51, best match: Isocortex basket


target name -> LC Th NAdr
match value: 0.71, best match: LC NAdr
match value: 0.71, best match: LC NAdr
match value: 0.71, best match: LC NAdr
match value: 0.43, best match: LC neuropeptide S expressing
match value: 0.43, best match: LC
match value: 0.32, best match: BLA principal with input from ORB CTX
match value: 0.32, best match: SOCm ventral
match value: 0.32, best match: SOCm dorsal
match value: 0.32, best match: SOCm ventral
match value: 0.32, best match: SOCm dorsal
match value: 0.32, best match: SUB Pyr projecting to RSP CTX
match value: 0.32, best match: SUB Pyr projecting to lateral entorhinal cortex CTX
match value: 0.32, best match: SUB Pyr projecting to medial entorhinal cortex CTX
match value: 0.32, best match: SUB Pyr projecting to ORB CTX
match value: 0.32, best match: L2-3 frontal Pyr projecting PERI CTX
match value: 0.32, best match: L5 frontal Pyr projecting PERI CTX 
match value: 0.32, best match: medial entorihinal CTX L2 stellate
match value: 0.32, best match: medial entorihinal CTX L2 stellate
match value: 0.32, best match: jcBNST bed nucleus st type 2
match value: 0.32, best match: jcBNST bed nucleus st type 3


target name -> CB Pcp2 Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB VERM II-VIII lobules Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.71, best match: CB Purkinje
match value: 0.66, best match: Densely Purkinje innerverted, FL targeting, gly
match value: 0.43, best match: CB granule
match value: 0.43, best match: CB Golgi
match value: 0.43, best match: CB granule


target name -> LC Th NAdr
match value: 0.71, best match: LC NAdr
match value: 0.71, best match: LC NAdr
match value: 0.71, best match: LC NAdr
match value: 0.43, best match: LC neuropeptide S expressing
match value: 0.43, best match: LC
match value: 0.32, best match: BLA principal with input from ORB CTX
match value: 0.32, best match: SOCm ventral
match value: 0.32, best match: SOCm dorsal
match value: 0.32, best match: SOCm ventral
match value: 0.32, best match: SOCm dorsal
match value: 0.32, best match: SUB Pyr projecting to RSP CTX
match value: 0.32, best match: SUB Pyr projecting to lateral entorhinal cortex CTX
match value: 0.32, best match: SUB Pyr projecting to medial entorhinal cortex CTX
match value: 0.32, best match: SUB Pyr projecting to ORB CTX
match value: 0.32, best match: L2-3 frontal Pyr projecting PERI CTX
match value: 0.32, best match: L5 frontal Pyr projecting PERI CTX 
match value: 0.32, best match: medial entorihinal CTX L2 stellate
match value: 0.32, best match: medial entorihinal CTX L2 stellate
match value: 0.32, best match: jcBNST bed nucleus st type 2
match value: 0.32, best match: jcBNST bed nucleus st type 3


target name -> SNc Th DA
match value: 0.71, best match: SNc DA
match value: 0.71, best match: SNc DA
match value: 0.71, best match: SNc DA
match value: 0.71, best match: SNc DA
match value: 0.71, best match: SNc DA
match value: 0.71, best match: SNc DA
match value: 0.71, best match: SNc DA Calb1
match value: 0.71, best match: SNc DA
match value: 0.71, best match: SNc DA
match value: 0.71, best match: SNc DA
match value: 0.71, best match: SNc DA
match value: 0.61, best match: VTA DA
match value: 0.61, best match: VTA DA
match value: 0.61, best match: VTA DA
match value: 0.61, best match: VTA DA
match value: 0.61, best match: VTA DA
match value: 0.61, best match: VTA DA
match value: 0.61, best match: VTA DA
match value: 0.61, best match: VTA DA
match value: 0.61, best match: VTA DA Calb1


target name -> VTA Th DA
match value: 0.71, best match: VTA DA
match value: 0.71, best match: VTA DA
match value: 0.71, best match: VTA DA
match value: 0.71, best match: VTA DA
match value: 0.71, best match: VTA DA
match value: 0.71, best match: VTA DA
match value: 0.71, best match: VTA DA
match value: 0.71, best match: VTA DA
match value: 0.71, best match: VTA DA Calb1
match value: 0.71, best match: VTA DA
match value: 0.61, best match: SNc DA
match value: 0.61, best match: SNc DA
match value: 0.61, best match: SNc DA
match value: 0.61, best match: SNc DA
match value: 0.61, best match: SNc DA
match value: 0.61, best match: SNc DA
match value: 0.61, best match: SNc DA Calb1
match value: 0.61, best match: SNc DA
match value: 0.61, best match: SNc DA
match value: 0.61, best match: SNc DA


target name -> Isocortex L2-3 Ntf3-expressing Pyr
match value: 1.00, best match: Isocortex Pyr L2-3
match value: 1.00, best match: Isocortex Pyr L2-3
match value: 1.00, best match: Isocortex Pyr L2-3
match value: 1.00, best match: Isocortex Pyr L2-3
match value: 1.00, best match: Isocortex L2-3 R S Non- Pyr
match value: 1.00, best match: Isocortex Pyr L2-3
match value: 1.00, best match: Isocortex Pyr L2-3
match value: 1.00, best match: Isocortex Pyr L2-3
match value: 1.00, best match: Isocortex L2-3 R S Pyr
match value: 1.00, best match: Isocortex Pyr L2-3
match value: 0.96, best match: L2-3 frontal Pyr projecting PERI CTX
match value: 0.96, best match: SS L2-3 R S Pyr GIN GIN
match value: 0.96, best match: SS L2-3 R S Pyr GIN GIN
match value: 0.96, best match: SSp-bfd Pyr L2-3
match value: 0.96, best match: SS L2-3 Pyr
match value: 0.96, best match: L2-3 MO Pyr
match value: 0.96, best match: ORB L2-3 Pyr
match value: 0.96, best match: VIS L2-3 /V Pyr
match value: 0.96, best match: VIS L2-3 /V Pyr
match value: 0.96, best match: VIS L2-3 /V Pyr


target name -> Isocortex L6 Ntsr1 Pyr
match value: 0.81, best match: SSp-bfd CThal Pyr L6 with F AHP
match value: 0.81, best match: SSp-bfd non- CThal Pyr L6 with medium AHP
match value: 0.81, best match: L6 SS Pyr
match value: 0.81, best match: L6 SS barrel column short Pyr
match value: 0.81, best match: ORB L6 small Pyr
match value: 0.81, best match: anterior ACA L6 Pyr
match value: 0.73, best match: Isocortex Pyr L5-6
match value: 0.73, best match: Isocortex Pyr L5-6
match value: 0.73, best match: Isocortex Pyr L5-6
match value: 0.70, best match: ORB L5-6 Pyr
match value: 0.70, best match: SSp-bfd L6a CCo Pyr with infragranular arborization axons
match value: 0.70, best match: L6a SSp-bfd Pyr CThal with large terminal arbors
match value: 0.70, best match: SS L5-6 Pyr
match value: 0.70, best match: ORB L5-6 Pyr
match value: 0.70, best match: medial ORB L5-6 Low-Threshold Calcium S Pyr
match value: 0.70, best match: medial ORB L5-6 Non-Low-Threshold Calcium S Pyr
match value: 0.65, best match: L6 MO NPyr Slc17a7
match value: 0.65, best match: SS L6 Mart
match value: 0.65, best match: VISp L6 Antidromic Corticofugal Antidromic Corticofugal
match value: 0.65, best match: VISp L6 Non-antidromic Corticofugal


target name -> Isocortex NF F S Dlx1
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex L4 stellate
match value: 0.60, best match: Isocortex L2-3 LT S
match value: 0.60, best match: Isocortex L5 Pyr
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex L4 stellate
match value: 0.60, best match: Isocortex L4 stellate
match value: 0.60, best match: Isocortex L5 large Pyr
match value: 0.60, best match: Isocortex basket
match value: 0.60, best match: Isocortex Pyr L2-3
match value: 0.60, best match: Isocortex Pyr L2-3
match value: 0.60, best match: Isocortex Pyr L5-6
match value: 0.60, best match: Isocortex L2-3 gaba L S subtype 1 Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba L NF F S Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba L S subtype 2 Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba B NAd Ad subtype 2 Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba F Ad Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba B NAd Ad subtype 1 Htr3a
match value: 0.60, best match: Isocortex L2-3 gaba I S bipolar Htr3a


target name -> Isocortex F S Nek7-expressing
match value: 1.00, best match: Isocortex basket
match value: 1.00, best match: Isocortex L4 stellate
match value: 1.00, best match: Isocortex L2-3 LT S
match value: 1.00, best match: Isocortex L5 Pyr
match value: 1.00, best match: Isocortex basket
match value: 1.00, best match: Isocortex basket
match value: 1.00, best match: Isocortex L4 stellate
match value: 1.00, best match: Isocortex L4 stellate
match value: 1.00, best match: Isocortex L5 large Pyr
match value: 1.00, best match: Isocortex basket
match value: 1.00, best match: Isocortex Pyr L2-3
match value: 1.00, best match: Isocortex Pyr L2-3
match value: 1.00, best match: Isocortex Pyr L5-6
match value: 1.00, best match: Isocortex L2-3 gaba L S subtype 1 Htr3a
match value: 1.00, best match: Isocortex L2-3 gaba L NF F S Htr3a
match value: 1.00, best match: Isocortex L2-3 gaba L S subtype 2 Htr3a
match value: 1.00, best match: Isocortex L2-3 gaba B NAd Ad subtype 2 Htr3a
match value: 1.00, best match: Isocortex L2-3 gaba F Ad Htr3a
match value: 1.00, best match: Isocortex L2-3 gaba B NAd Ad subtype 1 Htr3a
match value: 1.00, best match: Isocortex L2-3 gaba I S bipolar Htr3a


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba


target name -> 
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: HIP glu N2D-EGFP- positive
match value: 0.00, best match: CA3 Pyr
match value: 0.00, best match: secondary motor cortex CSp Pyr
match value: 0.00, best match: MOp CSp Pyr
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: glu HIP autaptic
match value: 0.00, best match: MOB (main) mitral
match value: 0.00, best match: BLA principal with input from ventral HIP
match value: 0.00, best match: BLA principal with input from ORB CTX
match value: 0.00, best match: ventral HIP stimulated stimulated in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated stimulated stimulated in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated F S in BLA sAMY
match value: 0.00, best match: ORB stimulated stimulated NF F S in BLA sAMY
match value: 0.00, best match: ventral HIP stimulated NF F S in BLA sAMY
match value: 0.00, best match: ORB infralimbic L2 ,III, and V Pyr
match value: 0.00, best match: CP Sst /neuropeptide-Y/ Nos1 Nos2 negative negative Htr3a LT S gaba
match value: 0.00, best match: CP neuropeptide-Y-negative Htr3a L S NG gaba



In [526]:

    
from similarity import similarity, similarity2
from similarity_intra import load_ontologies

# Computes the intra and inter semantic similarity between two neurons
# in: n1@str, n2@str: the two neurons to measure similarity
# out: (score:float, [(matching_properties, explanation@str)])
#similarity('PV Layer 1 cortex acetylcholine neuron', 'Layer 1a striatum gaba fast-spiking neuron')
print similarity('dorsal raphe serotonergic cell', 'Midbrain Slc6a4-expressing serotonergic cells', symmetric = True)
print similarity('Midbrain Slc6a4-expressing serotonergic cells', 'dorsal raphe serotonergic cell', symmetric = False)









    



(0.7708333333333334, [[], (['ABA_REGION:313'], 'sharing a common brain region'), [], [], [], ([u'HBP_NEUROTRANSMITTER:0000001'], 'shares neurotransmitters'), [], []])
(0.6607142857142857, [[], (['ABA_REGION:313'], 'sharing a common brain region'), [], [], [], ([u'HBP_NEUROTRANSMITTER:0000001'], 'shares neurotransmitters'), [], []])



In [137]:

    
similarity2(gene_dict_list[25]['annotations'], dict_list[25]['annotations'])









    Out[137]:





(0.0, [[], [], [], [], [], [], [], []])



In [161]:

    
print dict_list[25]['short_name']
print gene_exp_table.iloc[51]['annotations']









    



SSs L5b CSp TT large Pyr
[u'ABA_REGION:453', u'NCBI_GENE:19293', u'HBP_EPHYS:0000080', u'HBP_EPHYS_TRIGGER:0000003', u'HBP_MORPHOLOGY:0000019', 'Missing:from G42', 'Species:mouse', 'Missing:line', 'MOUSE_LINE:G42']



In [527]:

    
from  more_itertools import unique_everseen

def find_matching_neurons(target_neuron_anns, matching_ann_dict_list, match_thresh = .8):
    sim_vec = []
    sim_val_vec = []
    matching_neuron_list = []
    for d in matching_ann_dict_list:
        sim = similarity2(target_neuron_anns['annotations'], d['annotations'], symmetric = False, use_inter_similarity = False)
        sim_vec.append(sim)
        sim_val_vec.append(sim[0])
    sim_val_vec
    inds = sorted(range(len(sim_val_vec)),key=lambda x:sim_val_vec[x], reverse = True)
    for i in range(0, len(inds)):
        if sim_val_vec[inds[i]] > match_thresh:
            matching_neuron_list.append(dict_list[inds[i]]['neuron_name_orig'])
    if (len(matching_neuron_list) <= 2):
        #print match_thresh, target_neuron_anns
        return find_matching_neurons(target_neuron_anns, matching_ann_dict_list, match_thresh - .05)
    elif match_thresh < .4:
        return []
    return list(unique_everseen(matching_neuron_list))



In [528]:

    
ind = 63
#print gene_exp_table.iloc[ind]['neuron_name']
find_matching_neurons(gene_exp_table.iloc[ind], dict_list)









    Out[528]:





['Layer 5 sensorimotor cortex pyramidal neurons',
 'Primary motor cortex layer 5 corticothalamic pyramidal neuron',
 'Primary motor cortex layer 5 corticospinal pyramidal neuron',
 'Primary motor cortex layer 5 corticocortical pyramidal neuron',
 'Primary motor cortex layer 5 corticostriatal pyramidal neuron',
 'Neocortex Layer V Pyramidal Cell',
 'neocortex layer 5 large pyramidal cell',
 'Layer 5 neocortex pyramidal neuron',
 'Neocortex layer 5 pyramidal neuron',
 'Prefrontal cortex layer 5 large pyramidal neuron',
 'visual cortex layer 5 regular spiking tall pyramidal neuron',
 'visual cortex layer 5 bursting tall pyramidal neuron',
 'visual cortex layer 5 regular spiking short pyramidal neuron',
 'Layer 5 frontal pyramidal cells projecting perirhinal cortex  ',
 'Regular spiking, Thy1-expressing layer V pyramidal neurons of somatosensory cortex ',
 'Somatosensory cortex layer 5 apical pyramidal cell',
 'prefrontal cortex layer 5 pyramidal neuron ',
 'Layer 5 Visual Cortex large thick-tufted Pyramidal Neurons',
 'Somatosensory cortex layer 5 pyramidal neurons',
 'Layer 5 somatosensory cortex large amplitude pyramidal cells',
 'Layer 5 somatosensory cortex small amplitude pyramidal cells ',
 'medial prefrontal cortex layer 5 pyramidal cell',
 'Layer 5 medial prefrontal cortex prelimbic pyramidal neurons',
 'Layer 5 medial prefrontal cortex infralimbic pyramidal neurons',
 'Layer 5 somatosensory barrel cortex pyramidal neurons',
 'Prefrontal Cortex Layer 5 Pyramidal Neurons',
 'somatosensory cortex layer V thick tufted pyramidal cell',
 'somatosensory cortex layer V corticocallosal projecting pyramidal cell',
 'Visual cortex layer 5 regular spiking pyramidal cell',
 'Visual cortex layer 5 bursting pyramidal cell',
 'Anterior Cingulate Cortex Layer V Pyramidal Neuron',
 'primary somatosensory cortex layer 5 corticothalamic projecting pyramidal neurons',
 'primary somatosensory cortex layer 5 corticotrigeminal projecting pyramidal neurons',
 'primary somatosensory cortex layer 5 corticostriatal projecting pyramidal neurons ',
 'primary somatosensory cortex layer 5 corticocallosal projecting pyramidal neurons',
 'Somatosensory cortex layer 5 pyramidal cell',
 'somatosensory cortex layer 5 pyramidal GABAergic neurons',
 'primary somatosensory cortex layer 5 pyramidal neurons ',
 'Medial Prefrontal Cortex Layer V Drd4-expressing Pyramidal Neuron',
 'Medial Prefrontal Cortex Layer V non-Drd4-expressing Pyramidal Neuron',
 'associative parietal and visual cortex layer 5 pyramidal cell projecting to superior colliculus',
 'associative parietal and visual cortex layer 5 pyramidal cell projecting to contralateral cortex',
 'Primary motor cortex layer 5b corticospinal thick-tufted large pyramidal neuron',
 'Neocortex pyramidal cell layer 5-6']



In [529]:

    
import numpy as np
# use sherlok to annotate each curated neuron mention in neuroelectro
#annot_vec = []
gene_dict_list = []
for index, row in gene_exp_table.iterrows():
    temp_dict = {}
    if len(row['annotations']) > 0:
        matched_neuron_list = find_matching_neurons(row, dict_list)
    else:
        matched_neuron_list = []
    temp_dict['matched_neuron_list'] = ';'.join(matched_neuron_list)
    temp_dict['Index'] = index
    gene_dict_list.append(temp_dict)



In [530]:

    
df_gene = pd.DataFrame.from_records(gene_dict_list, index = 'Index')
gene_exp_table_final = gene_exp_table.join(df_gene)



In [531]:

    
gene_exp_table_final.head()









    Out[531]:






  
    
      
      MajorType
      JustPyra
      GabaDeep
      PyramidalDeep
      Neurotransmitter1
      ShinyNames
      ShinySubtypes
      CellType
      forContanim
      Normalize2.0
      ...
      annotations
      ephys
      gene
      layer
      line
      neuron_name
      region
      shape
      short_name
      matched_neuron_list
    
    
      Cell.Type..Samples
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
      
    
  
  
    
      H_lva_cortex:v2_GSM337817,v2_GSM337818,v2_GSM337819
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      Pyramidal
      T
      ...
      [ABA_REGION:315, HBP_LAYER:0000050, NCBI_GENE:...
      NaN
      Etv1
      L5a
      NaN
      Neocortex layer 5a Etv1-expressing slender-tuf...
      Isocortex
      ST Pyr
      Isocortex L5a Etv1 ST Pyr
      barrel cortex pyramidal neurons layer 5a;Layer...
    
    
      H_lvb_cortex:v2_GSM337821,v2_GSM337822,v2_GSM337823
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      Pyramidal
      T
      ...
      [ABA_REGION:315, HBP_LAYER:0000051, NCBI_GENE:...
      NaN
      Colgalt2
      L5b
      NaN
      Neocortex layer 5b Glt25d2-expressing thick-tu...
      Isocortex
      TT Pyr
      Isocortex L5b Colgalt2 TT Pyr
      Secondary somatosensory cortex layer 5b cortic...
    
    
      H_l6_cortex:v2_GSM337837,v2_GSM337838,v2_GSM337839
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      Pyramidal
      T
      ...
      [ABA_REGION:315, HBP_LAYER:0000006, NCBI_GENE:...
      NaN
      Ntsr1
      L6
      NaN
      Neocortex layer 6 Ntsr1-expressing pyramidal c...
      Isocortex
      Pyr
      Isocortex L6 Ntsr1 Pyr
      barrel cortex corticothalamic pyramidal neuron...
    
    
      H_cck+_cortex:v2_GSM337769,v2_GSM337770,v2_GSM337771
      Neuron
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      NaN
      F
      ...
      [ABA_REGION:315, NCBI_GENE:12424]
      NaN
      Cck
      NaN
      NaN
      Neocortex Cck-expressing cell
      Isocortex
      NaN
      Isocortex Cck
      frontal cortex Layer 2/3 non-pyramidal cholecy...
    
    
      H_mn_brainstem:v2_GSM337773,v2_GSM337774,v2_GSM337775
      Neuron
      NaN
      MotorCholin
      MotorCholin
      Cholinergic
      MotorCholin
      NaN
      MotorCholin
      MotorCholin
      T
      ...
      [ABA_REGION:343, NCBI_GENE:12647, HBP_NEUROTRA...
      NaN
      Chat
      NaN
      NaN
      Brainstem Chat-expressing cholinergic motor ne...
      BS
      NaN
      BS Chat ACh motor
      
    
  

5 rows × 39 columns



In [314]:



In [532]:

    
# work on sorting gene exp rows by semantic similarity

from scipy.spatial.distance import squareform
from scipy.cluster.hierarchy import leaders, fclusterdata, linkage, dendrogram, leaves_list

# calculate pairwise distance matrix based on similarity
dist_mat = []
labels = []
for index, row1 in gene_exp_table_final.iterrows():
    sim_vec = []
    ann1 = row1['annotations']
    labels.append(row1['short_name'])
    for i, row2 in gene_exp_table.iterrows():
        ann2 = row2['annotations']
        
        (sim_val, exp) = similarity2(ann1, ann2, symmetric = True, use_inter_similarity = False)
        sim_dist = 1 - sim_val
        sim_vec.append(sim_dist)
    dist_mat.append(sim_vec)
    
# 
d = squareform(dist_mat)
Z = linkage(d)
sorted_rows = leaves_list(Z)



In [533]:

    
gene_exp_table_final = gene_exp_table_final.iloc[sorted_rows]
gene_exp_table_final.to_csv('df_gene.csv', sep='\t', encoding='utf-8')



In [349]:



In [352]:

    
dendrogram(Z, labels = labels)









    Out[352]:





array([ 82,  15,  16,  17,  18,  24,  25,  26,  27,  28,  29,  30,  31,
        56,  57,  58,  59,  60,  61,  70,  72,  79,  80,  81,  83,  84,
        85,  86,  87,  88,  89,  90,  91, 104, 105, 111, 119, 120, 121,
       122,  50,  49,  55, 124,  51,  52,  53,  54, 106, 107, 108, 109,
       110,  69,  92,  93,  94,  95,  96,  97,  98,  13,  11,  12,  14,
        21,  22,  62,  19,  99, 100, 101, 126,  47,  48,  71,  42,  43,
        44,  45,  46,   0, 102,  38, 118,  35,  36,  37, 115, 116, 117,
        32,  33,  34,   1,  78,  40,  41,  67, 123,  63,  64,   3,   8,
        20, 113,  23, 114,   2,  39,  10,  76,  77,   9,  73,  74,  75,
       103, 128, 129,  65,  66,  68, 125, 127, 112,   4,   7,   5,   6], dtype=int32)



In [ ]:

	index	Title	Pmid	PubYear	LastAuthor	ArticleID	TableID	NeuronName	NeuronLongName	NeuronPrefName	...	mahpdur	mahpdur_err	mahpdur_n	mahpdur_sd	mahpdur_note	adpdur	adpdur_err	adpdur_n	adpdur_sd	adpdur_note
Index
1296	1296	Cell type-specific effects of adenosine on cor...	24108800	2015	Feldmeyer D	88449	35984	Neocortex Martinotti cell	medial prefrontal cortex low-threshold spiking...	medial prefrontal cortex low-threshold spiking...	...	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
1297	1297	Cell type-specific effects of adenosine on cor...	24108800	2015	Feldmeyer D	88449	35984	Neocortex basket cell	medial prefrontal cortex fast spiking interne...	medial prefrontal cortex fast spiking interne...	...	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
1299	1299	Cell type-specific effects of adenosine on cor...	24108800	2015	Feldmeyer D	88449	35984	Neocortex basket cell	somatosensory cortex fast-firing interneuron	somatosensory cortex fast-firing interneuron	...	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
1298	1298	Cell type-specific effects of adenosine on cor...	24108800	2015	Feldmeyer D	88449	35984	Neocortex interneuron deep	somatosensory cortex non-fast firing interneuron	somatosensory cortex non-fast firing interneuron	...	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN

	MajorType	JustPyra	GabaDeep	PyramidalDeep	Neurotransmitter1	ShinyNames	ShinySubtypes	CellType	forContanim	Normalize2.0	...	Method	RNA.isolation.method	RNA.amplification.and.labeling.method	Platform	Reference	PMID	SharePermit	Notes	MouseStrain	ReporterGene
Cell.Type..Samples
GSM1698225,GSM1698226,GSM1698227	Neuron	NaN	NaN	NaN	NaN	NaN	NaN	NaN	Pyramidal	T	...	TRAP	NaN	NaN	GPL1261	Shrestha et al. 2015	26371510	T	shreejoy wanted them	NaN	NaN
GSM1698228,GSM16982289,GSM1698230	Neuron	NaN	NaN	NaN	NaN	NaN	NaN	NaN	Pyramidal	T	...	TRAP	NaN	NaN	GPL1261	Shrestha et al. 2015	26371510	T	shreejoy wanted them	NaN	NaN
GSM1698231,GSM1698232,GSM1698233	Neuron	NaN	NaN	NaN	NaN	NaN	NaN	NaN	Gabaergic	T	...	TRAP	NaN	NaN	GPL1261	Shrestha et al. 2015	26371510	T	shreejoy wanted them	NaN	NaN
GSM1698237,GSM1698238,GSM1698239	Glia	NaN	NaN	NaN	NaN	NaN	NaN	NaN	Oligo	T	...	TRAP	NaN	NaN	GPL1261	Shrestha et al. 2015	26371510	T	shreejoy wanted them	NaN	NaN
GSM1698234,GSM1698235,GSM1698236	Glia	NaN	NaN	NaN	NaN	NaN	NaN	NaN	Astrocyte	T	...	TRAP	NaN	NaN	GPL1261	Shrestha et al. 2015	26371510	T	shreejoy wanted them	NaN	NaN

	MajorType	JustPyra	GabaDeep	PyramidalDeep	Neurotransmitter1	ShinyNames	ShinySubtypes	CellType	forContanim	Normalize2.0	...	annotations	ephys	gene	layer	line	neuron_name	region	shape	short_name	matched_neuron_list
Cell.Type..Samples
H_lva_cortex:v2_GSM337817,v2_GSM337818,v2_GSM337819	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	Pyramidal	T	...	[ABA_REGION:315, HBP_LAYER:0000050, NCBI_GENE:...	NaN	Etv1	L5a	NaN	Neocortex layer 5a Etv1-expressing slender-tuf...	Isocortex	ST Pyr	Isocortex L5a Etv1 ST Pyr	barrel cortex pyramidal neurons layer 5a;Layer...
H_lvb_cortex:v2_GSM337821,v2_GSM337822,v2_GSM337823	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	Pyramidal	T	...	[ABA_REGION:315, HBP_LAYER:0000051, NCBI_GENE:...	NaN	Colgalt2	L5b	NaN	Neocortex layer 5b Glt25d2-expressing thick-tu...	Isocortex	TT Pyr	Isocortex L5b Colgalt2 TT Pyr	Secondary somatosensory cortex layer 5b cortic...
H_l6_cortex:v2_GSM337837,v2_GSM337838,v2_GSM337839	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	Pyramidal	T	...	[ABA_REGION:315, HBP_LAYER:0000006, NCBI_GENE:...	NaN	Ntsr1	L6	NaN	Neocortex layer 6 Ntsr1-expressing pyramidal c...	Isocortex	Pyr	Isocortex L6 Ntsr1 Pyr	barrel cortex corticothalamic pyramidal neuron...
H_cck+_cortex:v2_GSM337769,v2_GSM337770,v2_GSM337771	Neuron	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	F	...	[ABA_REGION:315, NCBI_GENE:12424]	NaN	Cck	NaN	NaN	Neocortex Cck-expressing cell	Isocortex	NaN	Isocortex Cck	frontal cortex Layer 2/3 non-pyramidal cholecy...
H_mn_brainstem:v2_GSM337773,v2_GSM337774,v2_GSM337775	Neuron	NaN	MotorCholin	MotorCholin	Cholinergic	MotorCholin	NaN	MotorCholin	MotorCholin	T	...	[ABA_REGION:343, NCBI_GENE:12647, HBP_NEUROTRA...	NaN	Chat	NaN	NaN	Brainstem Chat-expressing cholinergic motor ne...	BS	NaN	BS Chat ACh motor