In [1]:

    

%load_ext autoreload
%autoreload 2
%matplotlib inline


    

In [2]:

    

import vtk
import matplotlib.pyplot as plt
import numpy as np
from mpl_toolkits.mplot3d import Axes3D


    

In [3]:

    

fname = 'data/net.vtp'
reader = vtk.vtkXMLPolyDataReader()
reader.SetFileName(fname)
reader.Update()
print reader


    

    




vtkXMLPolyDataReader (000000000A7533A0)
  Debug: Off
  Modified Time: 48
  Reference Count: 2
  Registered Events: (none)
  Executive: 0000000002D5F1A0
  ErrorCode: No error
  Information: 000000000A7EE430
  AbortExecute: Off
  Progress: 1
  Progress Text: (None)
  FileName: data/net.vtp
  CellDataArraySelection: 000000000A7EE4B0
  PointDataArraySelection: 000000000A7EE470
  Stream: (none)
  TimeStep:0
  NumberOfTimeSteps:0
  TimeStepRange:(0,0)

In [4]:

    

polydata = vtk.vtkPolyData()
polydata.ShallowCopy(reader.GetOutput())
print polydata


    

    




vtkPolyData (000000000411A810)
  Debug: Off
  Modified Time: 2759
  Reference Count: 1
  Registered Events: (none)
  Information: 0000000011A0E7E0
  Data Released: False
  Global Release Data: Off
  UpdateTime: 0
  Field Data:
    Debug: Off
    Modified Time: 2643
    Reference Count: 1
    Registered Events: (none)
    Number Of Arrays: 0
    Number Of Components: 0
    Number Of Tuples: 0
  Number Of Points: 424
  Number Of Cells: 737
  Cell Data:
    Debug: Off
    Modified Time: 2695
    Reference Count: 1
    Registered Events: 
      Registered Observers:
        vtkObserver (0000000011A054F0)
          Event: 33
          EventName: ModifiedEvent
          Command: 0000000011A11660
          Priority: 0
          Tag: 1
    Number Of Arrays: 36
    Array 0 name = throat.air_Standard_qzsIw
    Array 1 name = throat.air_conduit_diffusive_conductance
    Array 2 name = throat.air_diffusive_conductance
    Array 3 name = throat.air_gdiff_ac
    Array 4 name = throat.air_hydraulic_conductance
    Array 5 name = throat.air_occupancy
    Array 6 name = throat.air_rate
    Array 7 name = throat.all
    Array 8 name = throat.net_Boundary_BwHAX
    Array 9 name = throat.net_Standard_gmGnV
    Array 10 name = throat.net_Standard_qzsIw
    Array 11 name = throat.net_Toray090_3HkgD
    Array 12 name = throat.net_air
    Array 13 name = throat.net_area
    Array 14 name = throat.net_back_boundary
    Array 15 name = throat.net_bottom_boundary
    Array 16 name = throat.net_boundary
    Array 17 name = throat.net_diameter
    Array 18 name = throat.net_front_boundary
    Array 19 name = throat.net_left_boundary
    Array 20 name = throat.net_length
    Array 21 name = throat.net_right_boundary
    Array 22 name = throat.net_seed
    Array 23 name = throat.net_surface_area
    Array 24 name = throat.net_top_boundary
    Array 25 name = throat.net_volume
    Array 26 name = throat.net_water
    Array 27 name = throat.water_Standard_gmGnV
    Array 28 name = throat.water_capillary_pressure
    Array 29 name = throat.water_diffusive_conductance
    Array 30 name = throat.water_hydraulic_conductance
    Array 31 name = throat.water_inv_Pc
    Array 32 name = throat.water_inv_sat
    Array 33 name = throat.water_inv_seq
    Array 34 name = throat.water_invasion_sequence
    Array 35 name = throat.water_occupancy
    Number Of Components: 36
    Number Of Tuples: 737
    Copy Tuple Flags: ( 1 1 1 1 1 0 1 1 )
    Interpolate Flags: ( 1 1 1 1 1 0 0 1 )
    Pass Through Flags: ( 1 1 1 1 1 1 1 1 )
    Scalars: (none)
    Vectors: (none)
    Normals: (none)
    TCoords: (none)
    Tensors: (none)
    GlobalIds: (none)
    PedigreeIds: (none)
    EdgeFlag: (none)
  Point Data:
    Debug: Off
    Modified Time: 2759
    Reference Count: 1
    Registered Events: 
      Registered Observers:
        vtkObserver (0000000011A05430)
          Event: 33
          EventName: ModifiedEvent
          Command: 0000000011A11660
          Priority: 0
          Tag: 1
    Number Of Arrays: 61
    Array 0 name = pore.air_Dac
    Array 1 name = pore.air_Standard_qzsIw
    Array 2 name = pore.air_contact_angle
    Array 3 name = pore.air_critical_pressure
    Array 4 name = pore.air_critical_temperature
    Array 5 name = pore.air_critical_volume
    Array 6 name = pore.air_density
    Array 7 name = pore.air_diffusivity
    Array 8 name = pore.air_molar_density
    Array 9 name = pore.air_mole_fraction
    Array 10 name = pore.air_molecular_weight
    Array 11 name = pore.air_occupancy
    Array 12 name = pore.air_pressure
    Array 13 name = pore.air_temperature
    Array 14 name = pore.air_thermal_conductivity
    Array 15 name = pore.air_viscosity
    Array 16 name = pore.all
    Array 17 name = pore.net_Boundary_BwHAX
    Array 18 name = pore.net_Standard_gmGnV
    Array 19 name = pore.net_Standard_qzsIw
    Array 20 name = pore.net_Toray090_3HkgD
    Array 21 name = pore.net_air
    Array 22 name = pore.net_area
    Array 23 name = pore.net_back
    Array 24 name = pore.net_back_boundary
    Array 25 name = pore.net_bottom
    Array 26 name = pore.net_bottom_boundary
    Array 27 name = pore.net_boundary
    Array 28 name = pore.net_diameter
    Array 29 name = pore.net_front
    Array 30 name = pore.net_front_boundary
    Array 31 name = pore.net_internal
    Array 32 name = pore.net_left
    Array 33 name = pore.net_left_boundary
    Array 34 name = pore.net_right
    Array 35 name = pore.net_right_boundary
    Array 36 name = pore.net_seed
    Array 37 name = pore.net_top
    Array 38 name = pore.net_top_boundary
    Array 39 name = pore.net_volume
    Array 40 name = pore.net_water
    Array 41 name = pore.water_Standard_gmGnV
    Array 42 name = pore.water_contact_angle
    Array 43 name = pore.water_critical_pressure
    Array 44 name = pore.water_critical_temperature
    Array 45 name = pore.water_critical_volume
    Array 46 name = pore.water_density
    Array 47 name = pore.water_diffusivity
    Array 48 name = pore.water_inv_Pc
    Array 49 name = pore.water_inv_sat
    Array 50 name = pore.water_inv_seq
    Array 51 name = pore.water_invasion_sequence
    Array 52 name = pore.water_molar_density
    Array 53 name = pore.water_molecular_weight
    Array 54 name = pore.water_occupancy
    Array 55 name = pore.water_pressure
    Array 56 name = pore.water_surface_tension
    Array 57 name = pore.water_temperature
    Array 58 name = pore.water_thermal_conductivity
    Array 59 name = pore.water_vapor_pressure
    Array 60 name = pore.water_viscosity
    Number Of Components: 61
    Number Of Tuples: 424
    Copy Tuple Flags: ( 1 1 1 1 1 0 1 1 )
    Interpolate Flags: ( 1 1 1 1 1 0 0 1 )
    Pass Through Flags: ( 1 1 1 1 1 1 1 1 )
    Scalars: (none)
    Vectors: (none)
    Normals: (none)
    TCoords: (none)
    Tensors: (none)
    GlobalIds: (none)
    PedigreeIds: (none)
    EdgeFlag: (none)
  Bounds: 
    Xmin,Xmax: (0, 0.0005)
    Ymin,Ymax: (0, 0.0006)
    Zmin,Zmax: (0, 0.0007)
  Compute Time: 2761
  Number Of Points: 424
  Point Coordinates: 0000000003A5D280
  Locator: 0000000000000000
  Number Of Vertices: 0
  Number Of Lines: 737
  Number Of Polygons: 0
  Number Of Triangle Strips: 0
  Number Of Pieces: 1
  Piece: -1
  Ghost Level: 0

In [5]:

    

points = polydata.GetPoints()
n = polydata.GetNumberOfPoints()
print n


    

    




424

In [6]:

    

ax = plt.axes(projection='3d')
x, y, z = zip(*[points.GetPoint(i) for i in range(n)])
ax.scatter(x, y, z)


    

    




D:\Python\Anaconda2\lib\site-packages\matplotlib\collections.py:590: FutureWarning: elementwise comparison failed; returning scalar instead, but in the future will perform elementwise comparison
  if self._edgecolors == str('face'):






    
Out[6]:





<mpl_toolkits.mplot3d.art3d.Path3DCollection at 0x11b81ba8>






    

In [9]:

    

pointdata = polydata.GetPointData()
print pointdata


    

    




vtkPointData (0000000002FDFEF0)
  Debug: Off
  Modified Time: 2759
  Reference Count: 2
  Registered Events: 
    Registered Observers:
      vtkObserver (0000000011A05430)
        Event: 33
        EventName: ModifiedEvent
        Command: 0000000011A11660
        Priority: 0
        Tag: 1
  Number Of Arrays: 61
  Array 0 name = pore.air_Dac
  Array 1 name = pore.air_Standard_qzsIw
  Array 2 name = pore.air_contact_angle
  Array 3 name = pore.air_critical_pressure
  Array 4 name = pore.air_critical_temperature
  Array 5 name = pore.air_critical_volume
  Array 6 name = pore.air_density
  Array 7 name = pore.air_diffusivity
  Array 8 name = pore.air_molar_density
  Array 9 name = pore.air_mole_fraction
  Array 10 name = pore.air_molecular_weight
  Array 11 name = pore.air_occupancy
  Array 12 name = pore.air_pressure
  Array 13 name = pore.air_temperature
  Array 14 name = pore.air_thermal_conductivity
  Array 15 name = pore.air_viscosity
  Array 16 name = pore.all
  Array 17 name = pore.net_Boundary_BwHAX
  Array 18 name = pore.net_Standard_gmGnV
  Array 19 name = pore.net_Standard_qzsIw
  Array 20 name = pore.net_Toray090_3HkgD
  Array 21 name = pore.net_air
  Array 22 name = pore.net_area
  Array 23 name = pore.net_back
  Array 24 name = pore.net_back_boundary
  Array 25 name = pore.net_bottom
  Array 26 name = pore.net_bottom_boundary
  Array 27 name = pore.net_boundary
  Array 28 name = pore.net_diameter
  Array 29 name = pore.net_front
  Array 30 name = pore.net_front_boundary
  Array 31 name = pore.net_internal
  Array 32 name = pore.net_left
  Array 33 name = pore.net_left_boundary
  Array 34 name = pore.net_right
  Array 35 name = pore.net_right_boundary
  Array 36 name = pore.net_seed
  Array 37 name = pore.net_top
  Array 38 name = pore.net_top_boundary
  Array 39 name = pore.net_volume
  Array 40 name = pore.net_water
  Array 41 name = pore.water_Standard_gmGnV
  Array 42 name = pore.water_contact_angle
  Array 43 name = pore.water_critical_pressure
  Array 44 name = pore.water_critical_temperature
  Array 45 name = pore.water_critical_volume
  Array 46 name = pore.water_density
  Array 47 name = pore.water_diffusivity
  Array 48 name = pore.water_inv_Pc
  Array 49 name = pore.water_inv_sat
  Array 50 name = pore.water_inv_seq
  Array 51 name = pore.water_invasion_sequence
  Array 52 name = pore.water_molar_density
  Array 53 name = pore.water_molecular_weight
  Array 54 name = pore.water_occupancy
  Array 55 name = pore.water_pressure
  Array 56 name = pore.water_surface_tension
  Array 57 name = pore.water_temperature
  Array 58 name = pore.water_thermal_conductivity
  Array 59 name = pore.water_vapor_pressure
  Array 60 name = pore.water_viscosity
  Number Of Components: 61
  Number Of Tuples: 424
  Copy Tuple Flags: ( 1 1 1 1 1 0 1 1 )
  Interpolate Flags: ( 1 1 1 1 1 0 0 1 )
  Pass Through Flags: ( 1 1 1 1 1 1 1 1 )
  Scalars: (none)
  Vectors: (none)
  Normals: (none)
  TCoords: (none)
  Tensors: (none)
  GlobalIds: (none)
  PedigreeIds: (none)
  EdgeFlag: (none)

In [11]:

    

radius = pointdata.GetArray('pore.net_diameter')
print radius


    

    




vtkDoubleArray (000000000A853BF0)
  Debug: Off
  Modified Time: 1834
  Reference Count: 3
  Registered Events: (none)
  Name: pore.net_diameter
  Data type: double
  Size: 424
  MaxId: 423
  NumberOfComponents: 1
  Information: 0000000000000000
  Name: pore.net_diameter
  Number Of Components: 1
  Number Of Tuples: 424
  Size: 424
  MaxId: 423
  LookupTable: (none)
  Array: 0000000011A21F20

In [18]:

    

r = zip(*[radius.GetTuple(i) for i in range(n)])
ax = plt.axes(projection='3d')
ax.scatter(x, y, z, c=r)


    

    
Out[18]:





<mpl_toolkits.mplot3d.art3d.Path3DCollection at 0x11d069e8>






    

In [49]:

    

linedata = polydata.GetCellData()
print linedata


    

    




vtkCellData (0000000002FDFCF0)
  Debug: Off
  Modified Time: 2695
  Reference Count: 2
  Registered Events: 
    Registered Observers:
      vtkObserver (0000000011A054F0)
        Event: 33
        EventName: ModifiedEvent
        Command: 0000000011A11660
        Priority: 0
        Tag: 1
  Number Of Arrays: 36
  Array 0 name = throat.air_Standard_qzsIw
  Array 1 name = throat.air_conduit_diffusive_conductance
  Array 2 name = throat.air_diffusive_conductance
  Array 3 name = throat.air_gdiff_ac
  Array 4 name = throat.air_hydraulic_conductance
  Array 5 name = throat.air_occupancy
  Array 6 name = throat.air_rate
  Array 7 name = throat.all
  Array 8 name = throat.net_Boundary_BwHAX
  Array 9 name = throat.net_Standard_gmGnV
  Array 10 name = throat.net_Standard_qzsIw
  Array 11 name = throat.net_Toray090_3HkgD
  Array 12 name = throat.net_air
  Array 13 name = throat.net_area
  Array 14 name = throat.net_back_boundary
  Array 15 name = throat.net_bottom_boundary
  Array 16 name = throat.net_boundary
  Array 17 name = throat.net_diameter
  Array 18 name = throat.net_front_boundary
  Array 19 name = throat.net_left_boundary
  Array 20 name = throat.net_length
  Array 21 name = throat.net_right_boundary
  Array 22 name = throat.net_seed
  Array 23 name = throat.net_surface_area
  Array 24 name = throat.net_top_boundary
  Array 25 name = throat.net_volume
  Array 26 name = throat.net_water
  Array 27 name = throat.water_Standard_gmGnV
  Array 28 name = throat.water_capillary_pressure
  Array 29 name = throat.water_diffusive_conductance
  Array 30 name = throat.water_hydraulic_conductance
  Array 31 name = throat.water_inv_Pc
  Array 32 name = throat.water_inv_sat
  Array 33 name = throat.water_inv_seq
  Array 34 name = throat.water_invasion_sequence
  Array 35 name = throat.water_occupancy
  Number Of Components: 36
  Number Of Tuples: 737
  Copy Tuple Flags: ( 1 1 1 1 1 0 1 1 )
  Interpolate Flags: ( 1 1 1 1 1 0 0 1 )
  Pass Through Flags: ( 1 1 1 1 1 1 1 1 )
  Scalars: (none)
  Vectors: (none)
  Normals: (none)
  TCoords: (none)
  Tensors: (none)
  GlobalIds: (none)
  PedigreeIds: (none)
  EdgeFlag: (none)

In [51]:

    

tr = linedata.GetArray('throat.net_diameter')
print tr


    

    




vtkDoubleArray (0000000009E2E890)
  Debug: Off
  Modified Time: 2300
  Reference Count: 3
  Registered Events: (none)
  Name: throat.net_diameter
  Data type: double
  Size: 737
  MaxId: 736
  NumberOfComponents: 1
  Information: 0000000000000000
  Name: throat.net_diameter
  Number Of Components: 1
  Number Of Tuples: 737
  Size: 737
  MaxId: 736
  LookupTable: (none)
  Array: 0000000011A5D7B0

In [70]:

    

lines = polydata.GetLines()
print lines


    

    




vtkCellArray (0000000011A11430)
  Debug: Off
  Modified Time: 1680
  Reference Count: 3
  Registered Events: (none)
  Number Of Cells: 737
  Insert Location: 0
  Traversal Location: 2211

In [99]:

    

data = lines.GetData()
print data


    

    




vtkIdTypeArray (0000000009E2F850)
  Debug: Off
  Modified Time: 1681
  Reference Count: 2
  Registered Events: (none)
  Name: (none)
  Data type: idtype
  Size: 2211
  MaxId: 2210
  NumberOfComponents: 1
  Information: 0000000000000000
  Name: (none)
  Number Of Components: 1
  Number Of Tuples: 2211
  Size: 2211
  MaxId: 2210
  LookupTable: (none)
  Array: 0000000011A81440

In [117]:

    

ncells = polydata.GetNumberOfCells()
for i in xrange(ncells):
    cell = polydata.GetCell(i)
    print cell


    

    




vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (5e-005, 5e-005)
    Ymin,Ymax: (5e-005, 5e-005)
    Zmin,Zmax: (5e-005, 0.00015)
    Point ids are: 0, 1  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (5e-005, 5e-005)
    Ymin,Ymax: (5e-005, 5e-005)
    Zmin,Zmax: (0.00015, 0.00025)
    Point ids are: 1, 2  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (5e-005, 5e-005)
    Ymin,Ymax: (5e-005, 5e-005)
    Zmin,Zmax: (0.00025, 0.00035)
    Point ids are: 2, 3  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (5e-005, 5e-005)
    Ymin,Ymax: (5e-005, 5e-005)
    Zmin,Zmax: (0.00035, 0.00045)
    Point ids are: 3, 4  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (5e-005, 5e-005)
    Ymin,Ymax: (5e-005, 5e-005)
    Zmin,Zmax: (0.00045, 0.00055)
    Point ids are: 4, 5  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (5e-005, 5e-005)
    Ymin,Ymax: (5e-005, 5e-005)
    Zmin,Zmax: (0.00055, 0.00065)
    Point ids are: 5, 6  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (5e-005, 5e-005)
    Ymin,Ymax: (0.00015, 0.00015)
    Zmin,Zmax: (5e-005, 0.00015)
    Point ids are: 7, 8  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (5e-005, 5e-005)
    Ymin,Ymax: (0.00015, 0.00015)
    Zmin,Zmax: (0.00015, 0.00025)
    Point ids are: 8, 9  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (5e-005, 5e-005)
    Ymin,Ymax: (0.00015, 0.00015)
    Zmin,Zmax: (0.00025, 0.00035)
    Point ids are: 9, 10  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (5e-005, 5e-005)
    Ymin,Ymax: (0.00015, 0.00015)
    Zmin,Zmax: (0.00035, 0.00045)
    Point ids are: 10, 11  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (5e-005, 5e-005)
    Ymin,Ymax: (0.00015, 0.00015)
    Zmin,Zmax: (0.00045, 0.00055)
    Point ids are: 11, 12  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (5e-005, 5e-005)
    Ymin,Ymax: (0.00015, 0.00015)
    Zmin,Zmax: (0.00055, 0.00065)
    Point ids are: 12, 13  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (5e-005, 5e-005)
    Ymin,Ymax: (0.00025, 0.00025)
    Zmin,Zmax: (5e-005, 0.00015)
    Point ids are: 14, 15  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (5e-005, 5e-005)
    Ymin,Ymax: (0.00025, 0.00025)
    Zmin,Zmax: (0.00015, 0.00025)
    Point ids are: 15, 16  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (5e-005, 5e-005)
    Ymin,Ymax: (0.00025, 0.00025)
    Zmin,Zmax: (0.00025, 0.00035)
    Point ids are: 16, 17  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (5e-005, 5e-005)
    Ymin,Ymax: (0.00025, 0.00025)
    Zmin,Zmax: (0.00035, 0.00045)
    Point ids are: 17, 18  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (5e-005, 5e-005)
    Ymin,Ymax: (0.00025, 0.00025)
    Zmin,Zmax: (0.00045, 0.00055)
    Point ids are: 18, 19  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (5e-005, 5e-005)
    Ymin,Ymax: (0.00025, 0.00025)
    Zmin,Zmax: (0.00055, 0.00065)
    Point ids are: 19, 20  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (5e-005, 5e-005)
    Ymin,Ymax: (0.00035, 0.00035)
    Zmin,Zmax: (5e-005, 0.00015)
    Point ids are: 21, 22  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (5e-005, 5e-005)
    Ymin,Ymax: (0.00035, 0.00035)
    Zmin,Zmax: (0.00015, 0.00025)
    Point ids are: 22, 23  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (5e-005, 5e-005)
    Ymin,Ymax: (0.00035, 0.00035)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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    Point ids are: 173, 174  


vtkLine (0000000011A861E0)
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    Point ids are: 175, 176  


vtkLine (0000000011A861E0)
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    Point ids are: 176, 177  


vtkLine (0000000011A861E0)
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    Point ids are: 177, 178  


vtkLine (0000000011A861E0)
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    Point ids are: 178, 179  


vtkLine (0000000011A861E0)
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    Point ids are: 179, 180  


vtkLine (0000000011A861E0)
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    Point ids are: 180, 181  


vtkLine (0000000011A861E0)
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    Point ids are: 182, 183  


vtkLine (0000000011A861E0)
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    Point ids are: 183, 184  


vtkLine (0000000011A861E0)
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    Point ids are: 184, 185  


vtkLine (0000000011A861E0)
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    Point ids are: 185, 186  


vtkLine (0000000011A861E0)
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    Point ids are: 186, 187  


vtkLine (0000000011A861E0)
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    Point ids are: 187, 188  


vtkLine (0000000011A861E0)
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    Point ids are: 189, 190  


vtkLine (0000000011A861E0)
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    Point ids are: 190, 191  


vtkLine (0000000011A861E0)
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    Point ids are: 191, 192  


vtkLine (0000000011A861E0)
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    Point ids are: 192, 193  


vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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    Point ids are: 194, 195  


vtkLine (0000000011A861E0)
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    Point ids are: 196, 197  


vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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    Point ids are: 198, 199  


vtkLine (0000000011A861E0)
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    Point ids are: 199, 200  


vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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    Point ids are: 203, 204  


vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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    Point ids are: 206, 207  


vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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    Point ids are: 30, 37  


vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
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vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (0.00035, 0.00035)
    Ymin,Ymax: (5e-005, 5e-005)
    Zmin,Zmax: (0.00065, 0.0007)
    Point ids are: 132, 412  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (0.00035, 0.00035)
    Ymin,Ymax: (0.00015, 0.00015)
    Zmin,Zmax: (0.00065, 0.0007)
    Point ids are: 139, 413  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (0.00035, 0.00035)
    Ymin,Ymax: (0.00025, 0.00025)
    Zmin,Zmax: (0.00065, 0.0007)
    Point ids are: 146, 414  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (0.00035, 0.00035)
    Ymin,Ymax: (0.00035, 0.00035)
    Zmin,Zmax: (0.00065, 0.0007)
    Point ids are: 153, 415  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (0.00035, 0.00035)
    Ymin,Ymax: (0.00045, 0.00045)
    Zmin,Zmax: (0.00065, 0.0007)
    Point ids are: 160, 416  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (0.00035, 0.00035)
    Ymin,Ymax: (0.00055, 0.00055)
    Zmin,Zmax: (0.00065, 0.0007)
    Point ids are: 167, 417  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (0.00045, 0.00045)
    Ymin,Ymax: (5e-005, 5e-005)
    Zmin,Zmax: (0.00065, 0.0007)
    Point ids are: 174, 418  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (0.00045, 0.00045)
    Ymin,Ymax: (0.00015, 0.00015)
    Zmin,Zmax: (0.00065, 0.0007)
    Point ids are: 181, 419  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (0.00045, 0.00045)
    Ymin,Ymax: (0.00025, 0.00025)
    Zmin,Zmax: (0.00065, 0.0007)
    Point ids are: 188, 420  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (0.00045, 0.00045)
    Ymin,Ymax: (0.00035, 0.00035)
    Zmin,Zmax: (0.00065, 0.0007)
    Point ids are: 195, 421  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (0.00045, 0.00045)
    Ymin,Ymax: (0.00045, 0.00045)
    Zmin,Zmax: (0.00065, 0.0007)
    Point ids are: 202, 422  


vtkLine (0000000011A861E0)
  Debug: Off
  Modified Time: 2767
  Reference Count: 2
  Registered Events: (none)
  Number Of Points: 2
  Bounds: 
    Xmin,Xmax: (0.00045, 0.00045)
    Ymin,Ymax: (0.00055, 0.00055)
    Zmin,Zmax: (0.00065, 0.0007)
    Point ids are: 209, 423  

In [138]:

    

print polydata.GetPointData().GetArray('pore.net_diameter')


    

    




vtkDoubleArray (000000000A853BF0)
  Debug: Off
  Modified Time: 1834
  Reference Count: 3
  Registered Events: (none)
  Name: pore.net_diameter
  Data type: double
  Size: 424
  MaxId: 423
  NumberOfComponents: 1
  Information: 0000000000000000
  Name: pore.net_diameter
  Number Of Components: 1
  Number Of Tuples: 424
  Size: 424
  MaxId: 423
  LookupTable: (none)
  Array: 0000000011A21F20

In [141]:

    

point = polydata.GetPoint(i)
print point


    

    




(5.53e-322, 7.6e-322, 5.6e-322)