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import MDAnalysis as mda
import matplotlib.pyplot as plt
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from MDAnalysis import *
from MDAnalysis.analysis.align import *
from MDAnalysis.analysis.rms import rmsd
from MDAnalysis.analysis.rms import RMSF
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pdb = "./41wl_ff.pdb"
psf = "./41wl_ff.psf"
dcd = "./50_frame.dcd"
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rmsd?
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MDAnalysis.analysis.rms.RMSF?
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