In [3]:
import os
import sys
import random
import time
from random import seed, randint
import argparse
import platform
from datetime import datetime
import imp
import numpy as np
import fileinput
from itertools import product
import pandas as pd
from scipy.interpolate import griddata
from scipy.interpolate import interp2d
import seaborn as sns
from os import listdir
import matplotlib.pyplot as plt
import seaborn as sns
from scipy.interpolate import griddata
import matplotlib as mpl
sys.path.insert(0,'..')
# from notebookFunctions import *
# from .. import notebookFunctions
%matplotlib inline
plt.rcParams['figure.figsize'] = (10,6.180) #golden ratio
# %matplotlib notebook
%load_ext autoreload
%autoreload 2
import sys
sys.path.insert(0, '/Users/weilu/openmmawsem/')
from openmmawsem import *
In [2]:
os.chdir("/Users/weilu/openmmawsem/_local/multi_chain_1brr/openmm/")
In [4]:
input_pdb_filename, cleaned_pdb_filename =prepare_pdb("1brr.pdb", "ABC")
ensure_atom_order(input_pdb_filename, quiet=0)
Reorder atom position
Original, Changed to
2697 CA , 2697 CA
2698 CB , 2699 C
2699 C , 2700 O
2700 O , 2698 CB
In [7]:
ensure_atom_order(input_pdb_filename, quiet=0)
In [7]:
In [6]:
In [12]:
In [8]:
pdb_filename = input_pdb_filename
pdb = PDBFile(pdb_filename)
forcefield = ForceField("../../../awsem.xml")
forcefield.createSystem(pdb.topology)
resi = [x.residue.index for x in list(pdb.topology.atoms())]
nres = pdb.topology.getNumResidues()
natoms = pdb.topology.getNumAtoms()
residues = list(pdb.topology.residues())
atom_lists,res_type=build_lists_of_atoms_2(nres, residues, pdb.topology.atoms())
In [9]:
n =atom_lists['n']
h =atom_lists['h']
ca=atom_lists['ca']
c =atom_lists['c']
o =atom_lists['o']
cb=atom_lists['cb']
In [10]:
nres
Out[10]:
693
In [11]:
len(n)
Out[11]:
693
In [48]:
pdb_filename = "crystal_structure-cleaned.pdb"
pdb = PDBFile(pdb_filename)
residues = list(pdb.topology.residues())
chain_name = 'AB'
In [49]:
a = pdb.topology.chains
In [54]:
b = list(a())[0]
In [ ]:
pdb.topology.
In [63]:
c = list(b.residues())[0]
In [75]:
d = list(c.atoms())[4]
In [74]:
c
Out[74]:
<Residue 0 (GLN) of chain 0>
In [81]:
pdb_file = "crystal_structure-cleaned.pdb"
parser = PDBParser()
structure = parser.get_structure('X', pdb_file)
In [83]:
a = structure[0]
In [87]:
b = list(a.get_chains())[0]
In [90]:
c = list(b.get_residues())[0]
In [92]:
c.
Out[92]:
(' ', 1, ' ')
In [ ]:
def read_reference_structure_for_q_calculation_2(self, pdb_file, min_seq_sep=3, max_seq_sep=np.inf, contact_threshold=0.8*nanometers):
# default use all chains in pdb file.
parser = PDBParser()
structure = parser.get_structure('X', pdb_file)
model = structure[0]
chain_start = 0
count = 0
for chain in model.get_chains():
chain_start += count
count = 0
for i, residue_i in enumerate(chain.get_residues()):
count += 1
# print(i, residue_i)
for j, residue_j in enumerate(chain.get_residues()):
ca_list = []
cb_list = []
atom_list_i = []
atom_list_j = []
if i-j >= min_seq_sep and i-j <= max_seq_sep: # taking the signed value to avoid double counting
ca_i = residue_i['CA']
ca_list.append(ca_i)
atom_list_i.append(ca_i)
ca_j = residue_j['CA']
ca_list.append(ca_j)
atom_list_j.append(ca_j)
if not residue_i.get_resname() == "GLY":
cb_i = residue_i['CB']
cb_list.append(cb_i)
atom_list_i.append(cb_i)
if not residue_j.get_resname() == "GLY":
cb_j = residue_j['CB']
cb_list.append(cb_j)
atom_list_j.append(cb_j)
for atom_i, atom_j in product(atom_list_i, atom_list_j):
r_ijN = abs(atom_i - atom_j)/10.0*nanometers # convert to nm
if r_ijN <= contact_threshold:
sigma_ij = 0.1*abs(i-j)**0.15 # 0.1 nm = 1 A
gamma_ij = 1.0
if atom_i in ca_list:
i_index = self.ca[i+chain_start]
if atom_i in cb_list:
i_index = self.cb[i+chain_start]
if atom_j in ca_list:
j_index = self.ca[j+chain_start]
if atom_j in cb_list:
j_index = self.cb[j+chain_start]
structure_interaction = [i_index, j_index, [gamma_ij, r_ijN, sigma_ij]]
structure_interactions.append(structure_interaction)
return structure_interactions
In [ ]:
def read_reference_structure_for_q_calculation_2(self, pdb_file, min_seq_sep=3, max_seq_sep=np.inf, contact_threshold=0.8*nanometers):
# default use all chains in pdb file.
pdb = PDBFile(pdb_file)
for chain in pdb.topology.chains():
for residue_i in chain.residues():
i = residue_i.index
# print(i, residue_i)
for residue_j in chain.residues():
j = residue_j.index
ca_list = []
cb_list = []
atom_list_i = []
atom_list_j = []
if i-j >= min_seq_sep and i-j <= max_seq_sep: # taking the signed value to avoid double counting
ca_i = residue_i['CA']
ca_list.append(ca_i)
atom_list_i.append(ca_i)
ca_j = residue_j['CA']
ca_list.append(ca_j)
atom_list_j.append(ca_j)
if not residue_i.get_resname() == "GLY":
cb_i = residue_i['CB']
cb_list.append(cb_i)
atom_list_i.append(cb_i)
if not residue_j.get_resname() == "GLY":
cb_j = residue_j['CB']
cb_list.append(cb_j)
atom_list_j.append(cb_j)
for atom_i, atom_j in product(atom_list_i, atom_list_j):
r_ijN = abs(atom_i - atom_j)/10.0*nanometers # convert to nm
if r_ijN <= contact_threshold:
sigma_ij = 0.1*abs(i-j)**0.15 # 0.1 nm = 1 A
gamma_ij = 1.0
if atom_i in ca_list:
i_index = self.ca[i]
if atom_i in cb_list:
i_index = self.cb[i]
if atom_j in ca_list:
j_index = self.ca[j]
if atom_j in cb_list:
j_index = self.cb[j]
structure_interaction = [i_index, j_index, [gamma_ij, r_ijN, sigma_ij]]
structure_interactions.append(structure_interaction)
return structure_interactions
In [ ]:
pdb.topology.
In [61]:
for chain in pdb.topology.chains():
for i, residue_i in enumerate(chain.residues()):
print(i, residue_i)
for j, residue_j in enumerate(chain.residues()):
# print(i,j)
pass
0 <Residue 0 (GLN) of chain 0>
1 <Residue 1 (ILE) of chain 0>
2 <Residue 2 (THR) of chain 0>
3 <Residue 3 (GLY) of chain 0>
4 <Residue 4 (ARG) of chain 0>
5 <Residue 5 (PRO) of chain 0>
6 <Residue 6 (GLU) of chain 0>
7 <Residue 7 (TRP) of chain 0>
8 <Residue 8 (ILE) of chain 0>
9 <Residue 9 (TRP) of chain 0>
10 <Residue 10 (LEU) of chain 0>
11 <Residue 11 (ALA) of chain 0>
12 <Residue 12 (LEU) of chain 0>
13 <Residue 13 (GLY) of chain 0>
14 <Residue 14 (THR) of chain 0>
15 <Residue 15 (ALA) of chain 0>
16 <Residue 16 (LEU) of chain 0>
17 <Residue 17 (MET) of chain 0>
18 <Residue 18 (GLY) of chain 0>
19 <Residue 19 (LEU) of chain 0>
20 <Residue 20 (GLY) of chain 0>
21 <Residue 21 (THR) of chain 0>
22 <Residue 22 (LEU) of chain 0>
23 <Residue 23 (TYR) of chain 0>
24 <Residue 24 (PHE) of chain 0>
25 <Residue 25 (LEU) of chain 0>
26 <Residue 26 (VAL) of chain 0>
27 <Residue 27 (LYS) of chain 0>
28 <Residue 28 (GLY) of chain 0>
29 <Residue 29 (MET) of chain 0>
30 <Residue 30 (GLY) of chain 0>
31 <Residue 31 (VAL) of chain 0>
32 <Residue 32 (SER) of chain 0>
33 <Residue 33 (ASP) of chain 0>
34 <Residue 34 (PRO) of chain 0>
35 <Residue 35 (ASP) of chain 0>
36 <Residue 36 (ALA) of chain 0>
37 <Residue 37 (LYS) of chain 0>
38 <Residue 38 (LYS) of chain 0>
39 <Residue 39 (PHE) of chain 0>
40 <Residue 40 (TYR) of chain 0>
41 <Residue 41 (ALA) of chain 0>
42 <Residue 42 (ILE) of chain 0>
43 <Residue 43 (THR) of chain 0>
44 <Residue 44 (THR) of chain 0>
45 <Residue 45 (LEU) of chain 0>
46 <Residue 46 (VAL) of chain 0>
47 <Residue 47 (PRO) of chain 0>
48 <Residue 48 (ALA) of chain 0>
49 <Residue 49 (ILE) of chain 0>
50 <Residue 50 (ALA) of chain 0>
51 <Residue 51 (PHE) of chain 0>
52 <Residue 52 (THR) of chain 0>
53 <Residue 53 (MET) of chain 0>
54 <Residue 54 (TYR) of chain 0>
55 <Residue 55 (LEU) of chain 0>
56 <Residue 56 (SER) of chain 0>
57 <Residue 57 (MET) of chain 0>
58 <Residue 58 (LEU) of chain 0>
59 <Residue 59 (LEU) of chain 0>
60 <Residue 60 (GLY) of chain 0>
61 <Residue 61 (TYR) of chain 0>
62 <Residue 62 (GLY) of chain 0>
63 <Residue 63 (LEU) of chain 0>
64 <Residue 64 (THR) of chain 0>
65 <Residue 65 (MET) of chain 0>
66 <Residue 66 (VAL) of chain 0>
67 <Residue 67 (PRO) of chain 0>
68 <Residue 68 (PHE) of chain 0>
69 <Residue 69 (GLY) of chain 0>
70 <Residue 70 (GLY) of chain 0>
71 <Residue 71 (GLU) of chain 0>
72 <Residue 72 (GLN) of chain 0>
73 <Residue 73 (ASN) of chain 0>
74 <Residue 74 (PRO) of chain 0>
75 <Residue 75 (ILE) of chain 0>
76 <Residue 76 (TYR) of chain 0>
77 <Residue 77 (TRP) of chain 0>
78 <Residue 78 (ALA) of chain 0>
79 <Residue 79 (ARG) of chain 0>
80 <Residue 80 (TYR) of chain 0>
81 <Residue 81 (ALA) of chain 0>
82 <Residue 82 (ASP) of chain 0>
83 <Residue 83 (TRP) of chain 0>
84 <Residue 84 (LEU) of chain 0>
85 <Residue 85 (PHE) of chain 0>
86 <Residue 86 (THR) of chain 0>
87 <Residue 87 (THR) of chain 0>
88 <Residue 88 (PRO) of chain 0>
89 <Residue 89 (LEU) of chain 0>
90 <Residue 90 (LEU) of chain 0>
91 <Residue 91 (LEU) of chain 0>
92 <Residue 92 (LEU) of chain 0>
93 <Residue 93 (ASP) of chain 0>
94 <Residue 94 (LEU) of chain 0>
95 <Residue 95 (ALA) of chain 0>
96 <Residue 96 (LEU) of chain 0>
97 <Residue 97 (LEU) of chain 0>
98 <Residue 98 (VAL) of chain 0>
99 <Residue 99 (ASP) of chain 0>
100 <Residue 100 (ALA) of chain 0>
101 <Residue 101 (ASP) of chain 0>
102 <Residue 102 (GLN) of chain 0>
103 <Residue 103 (GLY) of chain 0>
104 <Residue 104 (THR) of chain 0>
105 <Residue 105 (ILE) of chain 0>
106 <Residue 106 (LEU) of chain 0>
107 <Residue 107 (ALA) of chain 0>
108 <Residue 108 (LEU) of chain 0>
109 <Residue 109 (VAL) of chain 0>
110 <Residue 110 (GLY) of chain 0>
111 <Residue 111 (ALA) of chain 0>
112 <Residue 112 (ASP) of chain 0>
113 <Residue 113 (GLY) of chain 0>
114 <Residue 114 (ILE) of chain 0>
115 <Residue 115 (MET) of chain 0>
116 <Residue 116 (ILE) of chain 0>
117 <Residue 117 (GLY) of chain 0>
118 <Residue 118 (THR) of chain 0>
119 <Residue 119 (GLY) of chain 0>
120 <Residue 120 (LEU) of chain 0>
121 <Residue 121 (VAL) of chain 0>
122 <Residue 122 (GLY) of chain 0>
123 <Residue 123 (ALA) of chain 0>
124 <Residue 124 (LEU) of chain 0>
125 <Residue 125 (THR) of chain 0>
126 <Residue 126 (LYS) of chain 0>
127 <Residue 127 (VAL) of chain 0>
128 <Residue 128 (TYR) of chain 0>
129 <Residue 129 (SER) of chain 0>
130 <Residue 130 (TYR) of chain 0>
131 <Residue 131 (ARG) of chain 0>
132 <Residue 132 (PHE) of chain 0>
133 <Residue 133 (VAL) of chain 0>
134 <Residue 134 (TRP) of chain 0>
135 <Residue 135 (TRP) of chain 0>
136 <Residue 136 (ALA) of chain 0>
137 <Residue 137 (ILE) of chain 0>
138 <Residue 138 (SER) of chain 0>
139 <Residue 139 (THR) of chain 0>
140 <Residue 140 (ALA) of chain 0>
141 <Residue 141 (ALA) of chain 0>
142 <Residue 142 (MET) of chain 0>
143 <Residue 143 (LEU) of chain 0>
144 <Residue 144 (TYR) of chain 0>
145 <Residue 145 (ILE) of chain 0>
146 <Residue 146 (LEU) of chain 0>
147 <Residue 147 (TYR) of chain 0>
148 <Residue 148 (VAL) of chain 0>
149 <Residue 149 (LEU) of chain 0>
150 <Residue 150 (PHE) of chain 0>
151 <Residue 151 (PHE) of chain 0>
152 <Residue 152 (GLY) of chain 0>
153 <Residue 153 (PHE) of chain 0>
154 <Residue 154 (THR) of chain 0>
155 <Residue 155 (SER) of chain 0>
156 <Residue 156 (LYS) of chain 0>
157 <Residue 157 (ALA) of chain 0>
158 <Residue 158 (GLU) of chain 0>
159 <Residue 159 (SER) of chain 0>
160 <Residue 160 (MET) of chain 0>
161 <Residue 161 (ARG) of chain 0>
162 <Residue 162 (PRO) of chain 0>
163 <Residue 163 (GLU) of chain 0>
164 <Residue 164 (VAL) of chain 0>
165 <Residue 165 (ALA) of chain 0>
166 <Residue 166 (SER) of chain 0>
167 <Residue 167 (THR) of chain 0>
168 <Residue 168 (PHE) of chain 0>
169 <Residue 169 (LYS) of chain 0>
170 <Residue 170 (VAL) of chain 0>
171 <Residue 171 (LEU) of chain 0>
172 <Residue 172 (ARG) of chain 0>
173 <Residue 173 (ASN) of chain 0>
174 <Residue 174 (VAL) of chain 0>
175 <Residue 175 (THR) of chain 0>
176 <Residue 176 (VAL) of chain 0>
177 <Residue 177 (VAL) of chain 0>
178 <Residue 178 (LEU) of chain 0>
179 <Residue 179 (TRP) of chain 0>
180 <Residue 180 (SER) of chain 0>
181 <Residue 181 (ALA) of chain 0>
182 <Residue 182 (TYR) of chain 0>
183 <Residue 183 (PRO) of chain 0>
184 <Residue 184 (VAL) of chain 0>
185 <Residue 185 (VAL) of chain 0>
186 <Residue 186 (TRP) of chain 0>
187 <Residue 187 (LEU) of chain 0>
188 <Residue 188 (ILE) of chain 0>
189 <Residue 189 (GLY) of chain 0>
190 <Residue 190 (SER) of chain 0>
191 <Residue 191 (GLU) of chain 0>
192 <Residue 192 (GLY) of chain 0>
193 <Residue 193 (ALA) of chain 0>
194 <Residue 194 (GLY) of chain 0>
195 <Residue 195 (ILE) of chain 0>
196 <Residue 196 (VAL) of chain 0>
197 <Residue 197 (PRO) of chain 0>
198 <Residue 198 (LEU) of chain 0>
199 <Residue 199 (ASN) of chain 0>
200 <Residue 200 (ILE) of chain 0>
201 <Residue 201 (GLU) of chain 0>
202 <Residue 202 (THR) of chain 0>
203 <Residue 203 (LEU) of chain 0>
204 <Residue 204 (LEU) of chain 0>
205 <Residue 205 (PHE) of chain 0>
206 <Residue 206 (MET) of chain 0>
207 <Residue 207 (VAL) of chain 0>
208 <Residue 208 (LEU) of chain 0>
209 <Residue 209 (ASP) of chain 0>
210 <Residue 210 (VAL) of chain 0>
211 <Residue 211 (SER) of chain 0>
212 <Residue 212 (ALA) of chain 0>
213 <Residue 213 (LYS) of chain 0>
214 <Residue 214 (VAL) of chain 0>
215 <Residue 215 (GLY) of chain 0>
216 <Residue 216 (PHE) of chain 0>
217 <Residue 217 (GLY) of chain 0>
218 <Residue 218 (LEU) of chain 0>
219 <Residue 219 (ILE) of chain 0>
220 <Residue 220 (LEU) of chain 0>
221 <Residue 221 (LEU) of chain 0>
222 <Residue 222 (ARG) of chain 0>
223 <Residue 223 (SER) of chain 0>
224 <Residue 224 (ARG) of chain 0>
225 <Residue 225 (ALA) of chain 0>
226 <Residue 226 (ILE) of chain 0>
227 <Residue 227 (PHE) of chain 0>
228 <Residue 228 (GLY) of chain 0>
229 <Residue 229 (GLU) of chain 0>
0 <Residue 230 (ALA) of chain 1>
1 <Residue 231 (GLN) of chain 1>
2 <Residue 232 (ILE) of chain 1>
3 <Residue 233 (THR) of chain 1>
4 <Residue 234 (GLY) of chain 1>
5 <Residue 235 (ARG) of chain 1>
6 <Residue 236 (PRO) of chain 1>
7 <Residue 237 (GLU) of chain 1>
8 <Residue 238 (TRP) of chain 1>
9 <Residue 239 (ILE) of chain 1>
10 <Residue 240 (TRP) of chain 1>
11 <Residue 241 (LEU) of chain 1>
12 <Residue 242 (ALA) of chain 1>
13 <Residue 243 (LEU) of chain 1>
14 <Residue 244 (GLY) of chain 1>
15 <Residue 245 (THR) of chain 1>
16 <Residue 246 (ALA) of chain 1>
17 <Residue 247 (LEU) of chain 1>
18 <Residue 248 (MET) of chain 1>
19 <Residue 249 (GLY) of chain 1>
20 <Residue 250 (LEU) of chain 1>
21 <Residue 251 (GLY) of chain 1>
22 <Residue 252 (THR) of chain 1>
23 <Residue 253 (LEU) of chain 1>
24 <Residue 254 (TYR) of chain 1>
25 <Residue 255 (PHE) of chain 1>
26 <Residue 256 (LEU) of chain 1>
27 <Residue 257 (VAL) of chain 1>
28 <Residue 258 (LYS) of chain 1>
29 <Residue 259 (GLY) of chain 1>
30 <Residue 260 (MET) of chain 1>
31 <Residue 261 (GLY) of chain 1>
32 <Residue 262 (VAL) of chain 1>
33 <Residue 263 (SER) of chain 1>
34 <Residue 264 (ASP) of chain 1>
35 <Residue 265 (PRO) of chain 1>
36 <Residue 266 (ASP) of chain 1>
37 <Residue 267 (ALA) of chain 1>
38 <Residue 268 (LYS) of chain 1>
39 <Residue 269 (LYS) of chain 1>
40 <Residue 270 (PHE) of chain 1>
41 <Residue 271 (TYR) of chain 1>
42 <Residue 272 (ALA) of chain 1>
43 <Residue 273 (ILE) of chain 1>
44 <Residue 274 (THR) of chain 1>
45 <Residue 275 (THR) of chain 1>
46 <Residue 276 (LEU) of chain 1>
47 <Residue 277 (VAL) of chain 1>
48 <Residue 278 (PRO) of chain 1>
49 <Residue 279 (ALA) of chain 1>
50 <Residue 280 (ILE) of chain 1>
51 <Residue 281 (ALA) of chain 1>
52 <Residue 282 (PHE) of chain 1>
53 <Residue 283 (THR) of chain 1>
54 <Residue 284 (MET) of chain 1>
55 <Residue 285 (TYR) of chain 1>
56 <Residue 286 (LEU) of chain 1>
57 <Residue 287 (SER) of chain 1>
58 <Residue 288 (MET) of chain 1>
59 <Residue 289 (LEU) of chain 1>
60 <Residue 290 (LEU) of chain 1>
61 <Residue 291 (GLY) of chain 1>
62 <Residue 292 (TYR) of chain 1>
63 <Residue 293 (GLY) of chain 1>
64 <Residue 294 (LEU) of chain 1>
65 <Residue 295 (THR) of chain 1>
66 <Residue 296 (MET) of chain 1>
67 <Residue 297 (VAL) of chain 1>
68 <Residue 298 (PRO) of chain 1>
69 <Residue 299 (PHE) of chain 1>
70 <Residue 300 (GLY) of chain 1>
71 <Residue 301 (GLY) of chain 1>
72 <Residue 302 (GLU) of chain 1>
73 <Residue 303 (GLN) of chain 1>
74 <Residue 304 (ASN) of chain 1>
75 <Residue 305 (PRO) of chain 1>
76 <Residue 306 (ILE) of chain 1>
77 <Residue 307 (TYR) of chain 1>
78 <Residue 308 (TRP) of chain 1>
79 <Residue 309 (ALA) of chain 1>
80 <Residue 310 (ARG) of chain 1>
81 <Residue 311 (TYR) of chain 1>
82 <Residue 312 (ALA) of chain 1>
83 <Residue 313 (ASP) of chain 1>
84 <Residue 314 (TRP) of chain 1>
85 <Residue 315 (LEU) of chain 1>
86 <Residue 316 (PHE) of chain 1>
87 <Residue 317 (THR) of chain 1>
88 <Residue 318 (THR) of chain 1>
89 <Residue 319 (PRO) of chain 1>
90 <Residue 320 (LEU) of chain 1>
91 <Residue 321 (LEU) of chain 1>
92 <Residue 322 (LEU) of chain 1>
93 <Residue 323 (LEU) of chain 1>
94 <Residue 324 (ASP) of chain 1>
95 <Residue 325 (LEU) of chain 1>
96 <Residue 326 (ALA) of chain 1>
97 <Residue 327 (LEU) of chain 1>
98 <Residue 328 (LEU) of chain 1>
99 <Residue 329 (VAL) of chain 1>
100 <Residue 330 (ASP) of chain 1>
101 <Residue 331 (ALA) of chain 1>
102 <Residue 332 (ASP) of chain 1>
103 <Residue 333 (GLN) of chain 1>
104 <Residue 334 (GLY) of chain 1>
105 <Residue 335 (THR) of chain 1>
106 <Residue 336 (ILE) of chain 1>
107 <Residue 337 (LEU) of chain 1>
108 <Residue 338 (ALA) of chain 1>
109 <Residue 339 (LEU) of chain 1>
110 <Residue 340 (VAL) of chain 1>
111 <Residue 341 (GLY) of chain 1>
112 <Residue 342 (ALA) of chain 1>
113 <Residue 343 (ASP) of chain 1>
114 <Residue 344 (GLY) of chain 1>
115 <Residue 345 (ILE) of chain 1>
116 <Residue 346 (MET) of chain 1>
117 <Residue 347 (ILE) of chain 1>
118 <Residue 348 (GLY) of chain 1>
119 <Residue 349 (THR) of chain 1>
120 <Residue 350 (GLY) of chain 1>
121 <Residue 351 (LEU) of chain 1>
122 <Residue 352 (VAL) of chain 1>
123 <Residue 353 (GLY) of chain 1>
124 <Residue 354 (ALA) of chain 1>
125 <Residue 355 (LEU) of chain 1>
126 <Residue 356 (THR) of chain 1>
127 <Residue 357 (LYS) of chain 1>
128 <Residue 358 (VAL) of chain 1>
129 <Residue 359 (TYR) of chain 1>
130 <Residue 360 (SER) of chain 1>
131 <Residue 361 (TYR) of chain 1>
132 <Residue 362 (ARG) of chain 1>
133 <Residue 363 (PHE) of chain 1>
134 <Residue 364 (VAL) of chain 1>
135 <Residue 365 (TRP) of chain 1>
136 <Residue 366 (TRP) of chain 1>
137 <Residue 367 (ALA) of chain 1>
138 <Residue 368 (ILE) of chain 1>
139 <Residue 369 (SER) of chain 1>
140 <Residue 370 (THR) of chain 1>
141 <Residue 371 (ALA) of chain 1>
142 <Residue 372 (ALA) of chain 1>
143 <Residue 373 (MET) of chain 1>
144 <Residue 374 (LEU) of chain 1>
145 <Residue 375 (TYR) of chain 1>
146 <Residue 376 (ILE) of chain 1>
147 <Residue 377 (LEU) of chain 1>
148 <Residue 378 (TYR) of chain 1>
149 <Residue 379 (VAL) of chain 1>
150 <Residue 380 (LEU) of chain 1>
151 <Residue 381 (PHE) of chain 1>
152 <Residue 382 (PHE) of chain 1>
153 <Residue 383 (GLY) of chain 1>
154 <Residue 384 (PHE) of chain 1>
155 <Residue 385 (THR) of chain 1>
156 <Residue 386 (SER) of chain 1>
157 <Residue 387 (LYS) of chain 1>
158 <Residue 388 (ALA) of chain 1>
159 <Residue 389 (GLU) of chain 1>
160 <Residue 390 (SER) of chain 1>
161 <Residue 391 (MET) of chain 1>
162 <Residue 392 (ARG) of chain 1>
163 <Residue 393 (PRO) of chain 1>
164 <Residue 394 (GLU) of chain 1>
165 <Residue 395 (VAL) of chain 1>
166 <Residue 396 (ALA) of chain 1>
167 <Residue 397 (SER) of chain 1>
168 <Residue 398 (THR) of chain 1>
169 <Residue 399 (PHE) of chain 1>
170 <Residue 400 (LYS) of chain 1>
171 <Residue 401 (VAL) of chain 1>
172 <Residue 402 (LEU) of chain 1>
173 <Residue 403 (ARG) of chain 1>
174 <Residue 404 (ASN) of chain 1>
175 <Residue 405 (VAL) of chain 1>
176 <Residue 406 (THR) of chain 1>
177 <Residue 407 (VAL) of chain 1>
178 <Residue 408 (VAL) of chain 1>
179 <Residue 409 (LEU) of chain 1>
180 <Residue 410 (TRP) of chain 1>
181 <Residue 411 (SER) of chain 1>
182 <Residue 412 (ALA) of chain 1>
183 <Residue 413 (TYR) of chain 1>
184 <Residue 414 (PRO) of chain 1>
185 <Residue 415 (VAL) of chain 1>
186 <Residue 416 (VAL) of chain 1>
187 <Residue 417 (TRP) of chain 1>
188 <Residue 418 (LEU) of chain 1>
189 <Residue 419 (ILE) of chain 1>
190 <Residue 420 (GLY) of chain 1>
191 <Residue 421 (SER) of chain 1>
192 <Residue 422 (GLU) of chain 1>
193 <Residue 423 (GLY) of chain 1>
194 <Residue 424 (ALA) of chain 1>
195 <Residue 425 (GLY) of chain 1>
196 <Residue 426 (ILE) of chain 1>
197 <Residue 427 (VAL) of chain 1>
198 <Residue 428 (PRO) of chain 1>
199 <Residue 429 (LEU) of chain 1>
200 <Residue 430 (ASN) of chain 1>
201 <Residue 431 (ILE) of chain 1>
202 <Residue 432 (GLU) of chain 1>
203 <Residue 433 (THR) of chain 1>
204 <Residue 434 (LEU) of chain 1>
205 <Residue 435 (LEU) of chain 1>
206 <Residue 436 (PHE) of chain 1>
207 <Residue 437 (MET) of chain 1>
208 <Residue 438 (VAL) of chain 1>
209 <Residue 439 (LEU) of chain 1>
210 <Residue 440 (ASP) of chain 1>
211 <Residue 441 (VAL) of chain 1>
212 <Residue 442 (SER) of chain 1>
213 <Residue 443 (ALA) of chain 1>
214 <Residue 444 (LYS) of chain 1>
215 <Residue 445 (VAL) of chain 1>
216 <Residue 446 (GLY) of chain 1>
217 <Residue 447 (PHE) of chain 1>
218 <Residue 448 (GLY) of chain 1>
219 <Residue 449 (LEU) of chain 1>
220 <Residue 450 (ILE) of chain 1>
221 <Residue 451 (LEU) of chain 1>
222 <Residue 452 (LEU) of chain 1>
223 <Residue 453 (ARG) of chain 1>
224 <Residue 454 (SER) of chain 1>
225 <Residue 455 (ARG) of chain 1>
226 <Residue 456 (ALA) of chain 1>
227 <Residue 457 (ILE) of chain 1>
228 <Residue 458 (PHE) of chain 1>
229 <Residue 459 (GLY) of chain 1>
230 <Residue 460 (GLU) of chain 1>
0 <Residue 461 (GLU) of chain 2>
1 <Residue 462 (ALA) of chain 2>
2 <Residue 463 (GLN) of chain 2>
3 <Residue 464 (ILE) of chain 2>
4 <Residue 465 (THR) of chain 2>
5 <Residue 466 (GLY) of chain 2>
6 <Residue 467 (ARG) of chain 2>
7 <Residue 468 (PRO) of chain 2>
8 <Residue 469 (GLU) of chain 2>
9 <Residue 470 (TRP) of chain 2>
10 <Residue 471 (ILE) of chain 2>
11 <Residue 472 (TRP) of chain 2>
12 <Residue 473 (LEU) of chain 2>
13 <Residue 474 (ALA) of chain 2>
14 <Residue 475 (LEU) of chain 2>
15 <Residue 476 (GLY) of chain 2>
16 <Residue 477 (THR) of chain 2>
17 <Residue 478 (ALA) of chain 2>
18 <Residue 479 (LEU) of chain 2>
19 <Residue 480 (MET) of chain 2>
20 <Residue 481 (GLY) of chain 2>
21 <Residue 482 (LEU) of chain 2>
22 <Residue 483 (GLY) of chain 2>
23 <Residue 484 (THR) of chain 2>
24 <Residue 485 (LEU) of chain 2>
25 <Residue 486 (TYR) of chain 2>
26 <Residue 487 (PHE) of chain 2>
27 <Residue 488 (LEU) of chain 2>
28 <Residue 489 (VAL) of chain 2>
29 <Residue 490 (LYS) of chain 2>
30 <Residue 491 (GLY) of chain 2>
31 <Residue 492 (MET) of chain 2>
32 <Residue 493 (GLY) of chain 2>
33 <Residue 494 (VAL) of chain 2>
34 <Residue 495 (SER) of chain 2>
35 <Residue 496 (ASP) of chain 2>
36 <Residue 497 (PRO) of chain 2>
37 <Residue 498 (ASP) of chain 2>
38 <Residue 499 (ALA) of chain 2>
39 <Residue 500 (LYS) of chain 2>
40 <Residue 501 (LYS) of chain 2>
41 <Residue 502 (PHE) of chain 2>
42 <Residue 503 (TYR) of chain 2>
43 <Residue 504 (ALA) of chain 2>
44 <Residue 505 (ILE) of chain 2>
45 <Residue 506 (THR) of chain 2>
46 <Residue 507 (THR) of chain 2>
47 <Residue 508 (LEU) of chain 2>
48 <Residue 509 (VAL) of chain 2>
49 <Residue 510 (PRO) of chain 2>
50 <Residue 511 (ALA) of chain 2>
51 <Residue 512 (ILE) of chain 2>
52 <Residue 513 (ALA) of chain 2>
53 <Residue 514 (PHE) of chain 2>
54 <Residue 515 (THR) of chain 2>
55 <Residue 516 (MET) of chain 2>
56 <Residue 517 (TYR) of chain 2>
57 <Residue 518 (LEU) of chain 2>
58 <Residue 519 (SER) of chain 2>
59 <Residue 520 (MET) of chain 2>
60 <Residue 521 (LEU) of chain 2>
61 <Residue 522 (LEU) of chain 2>
62 <Residue 523 (GLY) of chain 2>
63 <Residue 524 (TYR) of chain 2>
64 <Residue 525 (GLY) of chain 2>
65 <Residue 526 (LEU) of chain 2>
66 <Residue 527 (THR) of chain 2>
67 <Residue 528 (MET) of chain 2>
68 <Residue 529 (VAL) of chain 2>
69 <Residue 530 (PRO) of chain 2>
70 <Residue 531 (PHE) of chain 2>
71 <Residue 532 (GLY) of chain 2>
72 <Residue 533 (GLY) of chain 2>
73 <Residue 534 (GLU) of chain 2>
74 <Residue 535 (GLN) of chain 2>
75 <Residue 536 (ASN) of chain 2>
76 <Residue 537 (PRO) of chain 2>
77 <Residue 538 (ILE) of chain 2>
78 <Residue 539 (TYR) of chain 2>
79 <Residue 540 (TRP) of chain 2>
80 <Residue 541 (ALA) of chain 2>
81 <Residue 542 (ARG) of chain 2>
82 <Residue 543 (TYR) of chain 2>
83 <Residue 544 (ALA) of chain 2>
84 <Residue 545 (ASP) of chain 2>
85 <Residue 546 (TRP) of chain 2>
86 <Residue 547 (LEU) of chain 2>
87 <Residue 548 (PHE) of chain 2>
88 <Residue 549 (THR) of chain 2>
89 <Residue 550 (THR) of chain 2>
90 <Residue 551 (PRO) of chain 2>
91 <Residue 552 (LEU) of chain 2>
92 <Residue 553 (LEU) of chain 2>
93 <Residue 554 (LEU) of chain 2>
94 <Residue 555 (LEU) of chain 2>
95 <Residue 556 (ASP) of chain 2>
96 <Residue 557 (LEU) of chain 2>
97 <Residue 558 (ALA) of chain 2>
98 <Residue 559 (LEU) of chain 2>
99 <Residue 560 (LEU) of chain 2>
100 <Residue 561 (VAL) of chain 2>
101 <Residue 562 (ASP) of chain 2>
102 <Residue 563 (ALA) of chain 2>
103 <Residue 564 (ASP) of chain 2>
104 <Residue 565 (GLN) of chain 2>
105 <Residue 566 (GLY) of chain 2>
106 <Residue 567 (THR) of chain 2>
107 <Residue 568 (ILE) of chain 2>
108 <Residue 569 (LEU) of chain 2>
109 <Residue 570 (ALA) of chain 2>
110 <Residue 571 (LEU) of chain 2>
111 <Residue 572 (VAL) of chain 2>
112 <Residue 573 (GLY) of chain 2>
113 <Residue 574 (ALA) of chain 2>
114 <Residue 575 (ASP) of chain 2>
115 <Residue 576 (GLY) of chain 2>
116 <Residue 577 (ILE) of chain 2>
117 <Residue 578 (MET) of chain 2>
118 <Residue 579 (ILE) of chain 2>
119 <Residue 580 (GLY) of chain 2>
120 <Residue 581 (THR) of chain 2>
121 <Residue 582 (GLY) of chain 2>
122 <Residue 583 (LEU) of chain 2>
123 <Residue 584 (VAL) of chain 2>
124 <Residue 585 (GLY) of chain 2>
125 <Residue 586 (ALA) of chain 2>
126 <Residue 587 (LEU) of chain 2>
127 <Residue 588 (THR) of chain 2>
128 <Residue 589 (LYS) of chain 2>
129 <Residue 590 (VAL) of chain 2>
130 <Residue 591 (TYR) of chain 2>
131 <Residue 592 (SER) of chain 2>
132 <Residue 593 (TYR) of chain 2>
133 <Residue 594 (ARG) of chain 2>
134 <Residue 595 (PHE) of chain 2>
135 <Residue 596 (VAL) of chain 2>
136 <Residue 597 (TRP) of chain 2>
137 <Residue 598 (TRP) of chain 2>
138 <Residue 599 (ALA) of chain 2>
139 <Residue 600 (ILE) of chain 2>
140 <Residue 601 (SER) of chain 2>
141 <Residue 602 (THR) of chain 2>
142 <Residue 603 (ALA) of chain 2>
143 <Residue 604 (ALA) of chain 2>
144 <Residue 605 (MET) of chain 2>
145 <Residue 606 (LEU) of chain 2>
146 <Residue 607 (TYR) of chain 2>
147 <Residue 608 (ILE) of chain 2>
148 <Residue 609 (LEU) of chain 2>
149 <Residue 610 (TYR) of chain 2>
150 <Residue 611 (VAL) of chain 2>
151 <Residue 612 (LEU) of chain 2>
152 <Residue 613 (PHE) of chain 2>
153 <Residue 614 (PHE) of chain 2>
154 <Residue 615 (GLY) of chain 2>
155 <Residue 616 (PHE) of chain 2>
156 <Residue 617 (THR) of chain 2>
157 <Residue 618 (SER) of chain 2>
158 <Residue 619 (LYS) of chain 2>
159 <Residue 620 (ALA) of chain 2>
160 <Residue 621 (GLU) of chain 2>
161 <Residue 622 (SER) of chain 2>
162 <Residue 623 (MET) of chain 2>
163 <Residue 624 (ARG) of chain 2>
164 <Residue 625 (PRO) of chain 2>
165 <Residue 626 (GLU) of chain 2>
166 <Residue 627 (VAL) of chain 2>
167 <Residue 628 (ALA) of chain 2>
168 <Residue 629 (SER) of chain 2>
169 <Residue 630 (THR) of chain 2>
170 <Residue 631 (PHE) of chain 2>
171 <Residue 632 (LYS) of chain 2>
172 <Residue 633 (VAL) of chain 2>
173 <Residue 634 (LEU) of chain 2>
174 <Residue 635 (ARG) of chain 2>
175 <Residue 636 (ASN) of chain 2>
176 <Residue 637 (VAL) of chain 2>
177 <Residue 638 (THR) of chain 2>
178 <Residue 639 (VAL) of chain 2>
179 <Residue 640 (VAL) of chain 2>
180 <Residue 641 (LEU) of chain 2>
181 <Residue 642 (TRP) of chain 2>
182 <Residue 643 (SER) of chain 2>
183 <Residue 644 (ALA) of chain 2>
184 <Residue 645 (TYR) of chain 2>
185 <Residue 646 (PRO) of chain 2>
186 <Residue 647 (VAL) of chain 2>
187 <Residue 648 (VAL) of chain 2>
188 <Residue 649 (TRP) of chain 2>
189 <Residue 650 (LEU) of chain 2>
190 <Residue 651 (ILE) of chain 2>
191 <Residue 652 (GLY) of chain 2>
192 <Residue 653 (SER) of chain 2>
193 <Residue 654 (GLU) of chain 2>
194 <Residue 655 (GLY) of chain 2>
195 <Residue 656 (ALA) of chain 2>
196 <Residue 657 (GLY) of chain 2>
197 <Residue 658 (ILE) of chain 2>
198 <Residue 659 (VAL) of chain 2>
199 <Residue 660 (PRO) of chain 2>
200 <Residue 661 (LEU) of chain 2>
201 <Residue 662 (ASN) of chain 2>
202 <Residue 663 (ILE) of chain 2>
203 <Residue 664 (GLU) of chain 2>
204 <Residue 665 (THR) of chain 2>
205 <Residue 666 (LEU) of chain 2>
206 <Residue 667 (LEU) of chain 2>
207 <Residue 668 (PHE) of chain 2>
208 <Residue 669 (MET) of chain 2>
209 <Residue 670 (VAL) of chain 2>
210 <Residue 671 (LEU) of chain 2>
211 <Residue 672 (ASP) of chain 2>
212 <Residue 673 (VAL) of chain 2>
213 <Residue 674 (SER) of chain 2>
214 <Residue 675 (ALA) of chain 2>
215 <Residue 676 (LYS) of chain 2>
216 <Residue 677 (VAL) of chain 2>
217 <Residue 678 (GLY) of chain 2>
218 <Residue 679 (PHE) of chain 2>
219 <Residue 680 (GLY) of chain 2>
220 <Residue 681 (LEU) of chain 2>
221 <Residue 682 (ILE) of chain 2>
222 <Residue 683 (LEU) of chain 2>
223 <Residue 684 (LEU) of chain 2>
224 <Residue 685 (ARG) of chain 2>
225 <Residue 686 (SER) of chain 2>
226 <Residue 687 (ARG) of chain 2>
227 <Residue 688 (ALA) of chain 2>
228 <Residue 689 (ILE) of chain 2>
229 <Residue 690 (PHE) of chain 2>
230 <Residue 691 (GLY) of chain 2>
231 <Residue 692 (GLU) of chain 2>
In [13]:
a = list(pdb.topology.residues())
In [18]:
a1 = a[0]
In [21]:
a12 = a1.chain
In [39]:
a = getSeqFromCleanPdb(pdb_filename, chains="ABC")
In [40]:
len(a)
Out[40]:
693
In [35]:
identify_terminal_residues(input_pdb_filename)
Out[35]:
{'A': (1, 230), 'B': (1, 231), 'C': (1, 232)}
In [32]:
def get_chain_starts_and_ends(all_res):
chain_starts = []
chain_ends = []
pos = -1
for i, res in enumerate(all_res):
if res.chain.index != pos:
chain_starts.append(i)
pos = res.chain.index
if i > 0:
chain_ends.append(i-1)
chain_ends.append(len(a)-1)
return chain_starts, chain_ends
In [33]:
get_chain_starts_and_ends(residues)
Out[33]:
([0, 230, 461], [229, 460, 692])
In [59]:
pdb_file = "crystal_structure-cleaned.pdb"
chain_name = 'AB'
structure_interactions = []
parser = PDBParser()
structure = parser.get_structure('X', pdb_file)
# chain = structure[0][chain_name]
# residues = [x for x in chain]
for chain in chain_name:
residues = [x for x in structure[0][chain]]
for i, residue_i in enumerate(residues):
print(i, residue_i)
for j, residue_j in enumerate(residues):
# print(i,j)
pass
0 <Residue GLN het= resseq=1 icode= >
1 <Residue ILE het= resseq=2 icode= >
2 <Residue THR het= resseq=3 icode= >
3 <Residue GLY het= resseq=4 icode= >
4 <Residue ARG het= resseq=5 icode= >
5 <Residue PRO het= resseq=6 icode= >
6 <Residue GLU het= resseq=7 icode= >
7 <Residue TRP het= resseq=8 icode= >
8 <Residue ILE het= resseq=9 icode= >
9 <Residue TRP het= resseq=10 icode= >
10 <Residue LEU het= resseq=11 icode= >
11 <Residue ALA het= resseq=12 icode= >
12 <Residue LEU het= resseq=13 icode= >
13 <Residue GLY het= resseq=14 icode= >
14 <Residue THR het= resseq=15 icode= >
15 <Residue ALA het= resseq=16 icode= >
16 <Residue LEU het= resseq=17 icode= >
17 <Residue MET het= resseq=18 icode= >
18 <Residue GLY het= resseq=19 icode= >
19 <Residue LEU het= resseq=20 icode= >
20 <Residue GLY het= resseq=21 icode= >
21 <Residue THR het= resseq=22 icode= >
22 <Residue LEU het= resseq=23 icode= >
23 <Residue TYR het= resseq=24 icode= >
24 <Residue PHE het= resseq=25 icode= >
25 <Residue LEU het= resseq=26 icode= >
26 <Residue VAL het= resseq=27 icode= >
27 <Residue LYS het= resseq=28 icode= >
28 <Residue GLY het= resseq=29 icode= >
29 <Residue MET het= resseq=30 icode= >
30 <Residue GLY het= resseq=31 icode= >
31 <Residue VAL het= resseq=32 icode= >
32 <Residue SER het= resseq=33 icode= >
33 <Residue ASP het= resseq=34 icode= >
34 <Residue PRO het= resseq=35 icode= >
35 <Residue ASP het= resseq=36 icode= >
36 <Residue ALA het= resseq=37 icode= >
37 <Residue LYS het= resseq=38 icode= >
38 <Residue LYS het= resseq=39 icode= >
39 <Residue PHE het= resseq=40 icode= >
40 <Residue TYR het= resseq=41 icode= >
41 <Residue ALA het= resseq=42 icode= >
42 <Residue ILE het= resseq=43 icode= >
43 <Residue THR het= resseq=44 icode= >
44 <Residue THR het= resseq=45 icode= >
45 <Residue LEU het= resseq=46 icode= >
46 <Residue VAL het= resseq=47 icode= >
47 <Residue PRO het= resseq=48 icode= >
48 <Residue ALA het= resseq=49 icode= >
49 <Residue ILE het= resseq=50 icode= >
50 <Residue ALA het= resseq=51 icode= >
51 <Residue PHE het= resseq=52 icode= >
52 <Residue THR het= resseq=53 icode= >
53 <Residue MET het= resseq=54 icode= >
54 <Residue TYR het= resseq=55 icode= >
55 <Residue LEU het= resseq=56 icode= >
56 <Residue SER het= resseq=57 icode= >
57 <Residue MET het= resseq=58 icode= >
58 <Residue LEU het= resseq=59 icode= >
59 <Residue LEU het= resseq=60 icode= >
60 <Residue GLY het= resseq=61 icode= >
61 <Residue TYR het= resseq=62 icode= >
62 <Residue GLY het= resseq=63 icode= >
63 <Residue LEU het= resseq=64 icode= >
64 <Residue THR het= resseq=65 icode= >
65 <Residue MET het= resseq=66 icode= >
66 <Residue VAL het= resseq=67 icode= >
67 <Residue PRO het= resseq=68 icode= >
68 <Residue PHE het= resseq=69 icode= >
69 <Residue GLY het= resseq=70 icode= >
70 <Residue GLY het= resseq=71 icode= >
71 <Residue GLU het= resseq=72 icode= >
72 <Residue GLN het= resseq=73 icode= >
73 <Residue ASN het= resseq=74 icode= >
74 <Residue PRO het= resseq=75 icode= >
75 <Residue ILE het= resseq=76 icode= >
76 <Residue TYR het= resseq=77 icode= >
77 <Residue TRP het= resseq=78 icode= >
78 <Residue ALA het= resseq=79 icode= >
79 <Residue ARG het= resseq=80 icode= >
80 <Residue TYR het= resseq=81 icode= >
81 <Residue ALA het= resseq=82 icode= >
82 <Residue ASP het= resseq=83 icode= >
83 <Residue TRP het= resseq=84 icode= >
84 <Residue LEU het= resseq=85 icode= >
85 <Residue PHE het= resseq=86 icode= >
86 <Residue THR het= resseq=87 icode= >
87 <Residue THR het= resseq=88 icode= >
88 <Residue PRO het= resseq=89 icode= >
89 <Residue LEU het= resseq=90 icode= >
90 <Residue LEU het= resseq=91 icode= >
91 <Residue LEU het= resseq=92 icode= >
92 <Residue LEU het= resseq=93 icode= >
93 <Residue ASP het= resseq=94 icode= >
94 <Residue LEU het= resseq=95 icode= >
95 <Residue ALA het= resseq=96 icode= >
96 <Residue LEU het= resseq=97 icode= >
97 <Residue LEU het= resseq=98 icode= >
98 <Residue VAL het= resseq=99 icode= >
99 <Residue ASP het= resseq=100 icode= >
100 <Residue ALA het= resseq=101 icode= >
101 <Residue ASP het= resseq=102 icode= >
102 <Residue GLN het= resseq=103 icode= >
103 <Residue GLY het= resseq=104 icode= >
104 <Residue THR het= resseq=105 icode= >
105 <Residue ILE het= resseq=106 icode= >
106 <Residue LEU het= resseq=107 icode= >
107 <Residue ALA het= resseq=108 icode= >
108 <Residue LEU het= resseq=109 icode= >
109 <Residue VAL het= resseq=110 icode= >
110 <Residue GLY het= resseq=111 icode= >
111 <Residue ALA het= resseq=112 icode= >
112 <Residue ASP het= resseq=113 icode= >
113 <Residue GLY het= resseq=114 icode= >
114 <Residue ILE het= resseq=115 icode= >
115 <Residue MET het= resseq=116 icode= >
116 <Residue ILE het= resseq=117 icode= >
117 <Residue GLY het= resseq=118 icode= >
118 <Residue THR het= resseq=119 icode= >
119 <Residue GLY het= resseq=120 icode= >
120 <Residue LEU het= resseq=121 icode= >
121 <Residue VAL het= resseq=122 icode= >
122 <Residue GLY het= resseq=123 icode= >
123 <Residue ALA het= resseq=124 icode= >
124 <Residue LEU het= resseq=125 icode= >
125 <Residue THR het= resseq=126 icode= >
126 <Residue LYS het= resseq=127 icode= >
127 <Residue VAL het= resseq=128 icode= >
128 <Residue TYR het= resseq=129 icode= >
129 <Residue SER het= resseq=130 icode= >
130 <Residue TYR het= resseq=131 icode= >
131 <Residue ARG het= resseq=132 icode= >
132 <Residue PHE het= resseq=133 icode= >
133 <Residue VAL het= resseq=134 icode= >
134 <Residue TRP het= resseq=135 icode= >
135 <Residue TRP het= resseq=136 icode= >
136 <Residue ALA het= resseq=137 icode= >
137 <Residue ILE het= resseq=138 icode= >
138 <Residue SER het= resseq=139 icode= >
139 <Residue THR het= resseq=140 icode= >
140 <Residue ALA het= resseq=141 icode= >
141 <Residue ALA het= resseq=142 icode= >
142 <Residue MET het= resseq=143 icode= >
143 <Residue LEU het= resseq=144 icode= >
144 <Residue TYR het= resseq=145 icode= >
145 <Residue ILE het= resseq=146 icode= >
146 <Residue LEU het= resseq=147 icode= >
147 <Residue TYR het= resseq=148 icode= >
148 <Residue VAL het= resseq=149 icode= >
149 <Residue LEU het= resseq=150 icode= >
150 <Residue PHE het= resseq=151 icode= >
151 <Residue PHE het= resseq=152 icode= >
152 <Residue GLY het= resseq=153 icode= >
153 <Residue PHE het= resseq=154 icode= >
154 <Residue THR het= resseq=155 icode= >
155 <Residue SER het= resseq=156 icode= >
156 <Residue LYS het= resseq=157 icode= >
157 <Residue ALA het= resseq=158 icode= >
158 <Residue GLU het= resseq=159 icode= >
159 <Residue SER het= resseq=160 icode= >
160 <Residue MET het= resseq=161 icode= >
161 <Residue ARG het= resseq=162 icode= >
162 <Residue PRO het= resseq=163 icode= >
163 <Residue GLU het= resseq=164 icode= >
164 <Residue VAL het= resseq=165 icode= >
165 <Residue ALA het= resseq=166 icode= >
166 <Residue SER het= resseq=167 icode= >
167 <Residue THR het= resseq=168 icode= >
168 <Residue PHE het= resseq=169 icode= >
169 <Residue LYS het= resseq=170 icode= >
170 <Residue VAL het= resseq=171 icode= >
171 <Residue LEU het= resseq=172 icode= >
172 <Residue ARG het= resseq=173 icode= >
173 <Residue ASN het= resseq=174 icode= >
174 <Residue VAL het= resseq=175 icode= >
175 <Residue THR het= resseq=176 icode= >
176 <Residue VAL het= resseq=177 icode= >
177 <Residue VAL het= resseq=178 icode= >
178 <Residue LEU het= resseq=179 icode= >
179 <Residue TRP het= resseq=180 icode= >
180 <Residue SER het= resseq=181 icode= >
181 <Residue ALA het= resseq=182 icode= >
182 <Residue TYR het= resseq=183 icode= >
183 <Residue PRO het= resseq=184 icode= >
184 <Residue VAL het= resseq=185 icode= >
185 <Residue VAL het= resseq=186 icode= >
186 <Residue TRP het= resseq=187 icode= >
187 <Residue LEU het= resseq=188 icode= >
188 <Residue ILE het= resseq=189 icode= >
189 <Residue GLY het= resseq=190 icode= >
190 <Residue SER het= resseq=191 icode= >
191 <Residue GLU het= resseq=192 icode= >
192 <Residue GLY het= resseq=193 icode= >
193 <Residue ALA het= resseq=194 icode= >
194 <Residue GLY het= resseq=195 icode= >
195 <Residue ILE het= resseq=196 icode= >
196 <Residue VAL het= resseq=197 icode= >
197 <Residue PRO het= resseq=198 icode= >
198 <Residue LEU het= resseq=199 icode= >
199 <Residue ASN het= resseq=200 icode= >
200 <Residue ILE het= resseq=201 icode= >
201 <Residue GLU het= resseq=202 icode= >
202 <Residue THR het= resseq=203 icode= >
203 <Residue LEU het= resseq=204 icode= >
204 <Residue LEU het= resseq=205 icode= >
205 <Residue PHE het= resseq=206 icode= >
206 <Residue MET het= resseq=207 icode= >
207 <Residue VAL het= resseq=208 icode= >
208 <Residue LEU het= resseq=209 icode= >
209 <Residue ASP het= resseq=210 icode= >
210 <Residue VAL het= resseq=211 icode= >
211 <Residue SER het= resseq=212 icode= >
212 <Residue ALA het= resseq=213 icode= >
213 <Residue LYS het= resseq=214 icode= >
214 <Residue VAL het= resseq=215 icode= >
215 <Residue GLY het= resseq=216 icode= >
216 <Residue PHE het= resseq=217 icode= >
217 <Residue GLY het= resseq=218 icode= >
218 <Residue LEU het= resseq=219 icode= >
219 <Residue ILE het= resseq=220 icode= >
220 <Residue LEU het= resseq=221 icode= >
221 <Residue LEU het= resseq=222 icode= >
222 <Residue ARG het= resseq=223 icode= >
223 <Residue SER het= resseq=224 icode= >
224 <Residue ARG het= resseq=225 icode= >
225 <Residue ALA het= resseq=226 icode= >
226 <Residue ILE het= resseq=227 icode= >
227 <Residue PHE het= resseq=228 icode= >
228 <Residue GLY het= resseq=229 icode= >
229 <Residue GLU het= resseq=230 icode= >
0 <Residue ALA het= resseq=1 icode= >
1 <Residue GLN het= resseq=2 icode= >
2 <Residue ILE het= resseq=3 icode= >
3 <Residue THR het= resseq=4 icode= >
4 <Residue GLY het= resseq=5 icode= >
5 <Residue ARG het= resseq=6 icode= >
6 <Residue PRO het= resseq=7 icode= >
7 <Residue GLU het= resseq=8 icode= >
8 <Residue TRP het= resseq=9 icode= >
9 <Residue ILE het= resseq=10 icode= >
10 <Residue TRP het= resseq=11 icode= >
11 <Residue LEU het= resseq=12 icode= >
12 <Residue ALA het= resseq=13 icode= >
13 <Residue LEU het= resseq=14 icode= >
14 <Residue GLY het= resseq=15 icode= >
15 <Residue THR het= resseq=16 icode= >
16 <Residue ALA het= resseq=17 icode= >
17 <Residue LEU het= resseq=18 icode= >
18 <Residue MET het= resseq=19 icode= >
19 <Residue GLY het= resseq=20 icode= >
20 <Residue LEU het= resseq=21 icode= >
21 <Residue GLY het= resseq=22 icode= >
22 <Residue THR het= resseq=23 icode= >
23 <Residue LEU het= resseq=24 icode= >
24 <Residue TYR het= resseq=25 icode= >
25 <Residue PHE het= resseq=26 icode= >
26 <Residue LEU het= resseq=27 icode= >
27 <Residue VAL het= resseq=28 icode= >
28 <Residue LYS het= resseq=29 icode= >
29 <Residue GLY het= resseq=30 icode= >
30 <Residue MET het= resseq=31 icode= >
31 <Residue GLY het= resseq=32 icode= >
32 <Residue VAL het= resseq=33 icode= >
33 <Residue SER het= resseq=34 icode= >
34 <Residue ASP het= resseq=35 icode= >
35 <Residue PRO het= resseq=36 icode= >
36 <Residue ASP het= resseq=37 icode= >
37 <Residue ALA het= resseq=38 icode= >
38 <Residue LYS het= resseq=39 icode= >
39 <Residue LYS het= resseq=40 icode= >
40 <Residue PHE het= resseq=41 icode= >
41 <Residue TYR het= resseq=42 icode= >
42 <Residue ALA het= resseq=43 icode= >
43 <Residue ILE het= resseq=44 icode= >
44 <Residue THR het= resseq=45 icode= >
45 <Residue THR het= resseq=46 icode= >
46 <Residue LEU het= resseq=47 icode= >
47 <Residue VAL het= resseq=48 icode= >
48 <Residue PRO het= resseq=49 icode= >
49 <Residue ALA het= resseq=50 icode= >
50 <Residue ILE het= resseq=51 icode= >
51 <Residue ALA het= resseq=52 icode= >
52 <Residue PHE het= resseq=53 icode= >
53 <Residue THR het= resseq=54 icode= >
54 <Residue MET het= resseq=55 icode= >
55 <Residue TYR het= resseq=56 icode= >
56 <Residue LEU het= resseq=57 icode= >
57 <Residue SER het= resseq=58 icode= >
58 <Residue MET het= resseq=59 icode= >
59 <Residue LEU het= resseq=60 icode= >
60 <Residue LEU het= resseq=61 icode= >
61 <Residue GLY het= resseq=62 icode= >
62 <Residue TYR het= resseq=63 icode= >
63 <Residue GLY het= resseq=64 icode= >
64 <Residue LEU het= resseq=65 icode= >
65 <Residue THR het= resseq=66 icode= >
66 <Residue MET het= resseq=67 icode= >
67 <Residue VAL het= resseq=68 icode= >
68 <Residue PRO het= resseq=69 icode= >
69 <Residue PHE het= resseq=70 icode= >
70 <Residue GLY het= resseq=71 icode= >
71 <Residue GLY het= resseq=72 icode= >
72 <Residue GLU het= resseq=73 icode= >
73 <Residue GLN het= resseq=74 icode= >
74 <Residue ASN het= resseq=75 icode= >
75 <Residue PRO het= resseq=76 icode= >
76 <Residue ILE het= resseq=77 icode= >
77 <Residue TYR het= resseq=78 icode= >
78 <Residue TRP het= resseq=79 icode= >
79 <Residue ALA het= resseq=80 icode= >
80 <Residue ARG het= resseq=81 icode= >
81 <Residue TYR het= resseq=82 icode= >
82 <Residue ALA het= resseq=83 icode= >
83 <Residue ASP het= resseq=84 icode= >
84 <Residue TRP het= resseq=85 icode= >
85 <Residue LEU het= resseq=86 icode= >
86 <Residue PHE het= resseq=87 icode= >
87 <Residue THR het= resseq=88 icode= >
88 <Residue THR het= resseq=89 icode= >
89 <Residue PRO het= resseq=90 icode= >
90 <Residue LEU het= resseq=91 icode= >
91 <Residue LEU het= resseq=92 icode= >
92 <Residue LEU het= resseq=93 icode= >
93 <Residue LEU het= resseq=94 icode= >
94 <Residue ASP het= resseq=95 icode= >
95 <Residue LEU het= resseq=96 icode= >
96 <Residue ALA het= resseq=97 icode= >
97 <Residue LEU het= resseq=98 icode= >
98 <Residue LEU het= resseq=99 icode= >
99 <Residue VAL het= resseq=100 icode= >
100 <Residue ASP het= resseq=101 icode= >
101 <Residue ALA het= resseq=102 icode= >
102 <Residue ASP het= resseq=103 icode= >
103 <Residue GLN het= resseq=104 icode= >
104 <Residue GLY het= resseq=105 icode= >
105 <Residue THR het= resseq=106 icode= >
106 <Residue ILE het= resseq=107 icode= >
107 <Residue LEU het= resseq=108 icode= >
108 <Residue ALA het= resseq=109 icode= >
109 <Residue LEU het= resseq=110 icode= >
110 <Residue VAL het= resseq=111 icode= >
111 <Residue GLY het= resseq=112 icode= >
112 <Residue ALA het= resseq=113 icode= >
113 <Residue ASP het= resseq=114 icode= >
114 <Residue GLY het= resseq=115 icode= >
115 <Residue ILE het= resseq=116 icode= >
116 <Residue MET het= resseq=117 icode= >
117 <Residue ILE het= resseq=118 icode= >
118 <Residue GLY het= resseq=119 icode= >
119 <Residue THR het= resseq=120 icode= >
120 <Residue GLY het= resseq=121 icode= >
121 <Residue LEU het= resseq=122 icode= >
122 <Residue VAL het= resseq=123 icode= >
123 <Residue GLY het= resseq=124 icode= >
124 <Residue ALA het= resseq=125 icode= >
125 <Residue LEU het= resseq=126 icode= >
126 <Residue THR het= resseq=127 icode= >
127 <Residue LYS het= resseq=128 icode= >
128 <Residue VAL het= resseq=129 icode= >
129 <Residue TYR het= resseq=130 icode= >
130 <Residue SER het= resseq=131 icode= >
131 <Residue TYR het= resseq=132 icode= >
132 <Residue ARG het= resseq=133 icode= >
133 <Residue PHE het= resseq=134 icode= >
134 <Residue VAL het= resseq=135 icode= >
135 <Residue TRP het= resseq=136 icode= >
136 <Residue TRP het= resseq=137 icode= >
137 <Residue ALA het= resseq=138 icode= >
138 <Residue ILE het= resseq=139 icode= >
139 <Residue SER het= resseq=140 icode= >
140 <Residue THR het= resseq=141 icode= >
141 <Residue ALA het= resseq=142 icode= >
142 <Residue ALA het= resseq=143 icode= >
143 <Residue MET het= resseq=144 icode= >
144 <Residue LEU het= resseq=145 icode= >
145 <Residue TYR het= resseq=146 icode= >
146 <Residue ILE het= resseq=147 icode= >
147 <Residue LEU het= resseq=148 icode= >
148 <Residue TYR het= resseq=149 icode= >
149 <Residue VAL het= resseq=150 icode= >
150 <Residue LEU het= resseq=151 icode= >
151 <Residue PHE het= resseq=152 icode= >
152 <Residue PHE het= resseq=153 icode= >
153 <Residue GLY het= resseq=154 icode= >
154 <Residue PHE het= resseq=155 icode= >
155 <Residue THR het= resseq=156 icode= >
156 <Residue SER het= resseq=157 icode= >
157 <Residue LYS het= resseq=158 icode= >
158 <Residue ALA het= resseq=159 icode= >
159 <Residue GLU het= resseq=160 icode= >
160 <Residue SER het= resseq=161 icode= >
161 <Residue MET het= resseq=162 icode= >
162 <Residue ARG het= resseq=163 icode= >
163 <Residue PRO het= resseq=164 icode= >
164 <Residue GLU het= resseq=165 icode= >
165 <Residue VAL het= resseq=166 icode= >
166 <Residue ALA het= resseq=167 icode= >
167 <Residue SER het= resseq=168 icode= >
168 <Residue THR het= resseq=169 icode= >
169 <Residue PHE het= resseq=170 icode= >
170 <Residue LYS het= resseq=171 icode= >
171 <Residue VAL het= resseq=172 icode= >
172 <Residue LEU het= resseq=173 icode= >
173 <Residue ARG het= resseq=174 icode= >
174 <Residue ASN het= resseq=175 icode= >
175 <Residue VAL het= resseq=176 icode= >
176 <Residue THR het= resseq=177 icode= >
177 <Residue VAL het= resseq=178 icode= >
178 <Residue VAL het= resseq=179 icode= >
179 <Residue LEU het= resseq=180 icode= >
180 <Residue TRP het= resseq=181 icode= >
181 <Residue SER het= resseq=182 icode= >
182 <Residue ALA het= resseq=183 icode= >
183 <Residue TYR het= resseq=184 icode= >
184 <Residue PRO het= resseq=185 icode= >
185 <Residue VAL het= resseq=186 icode= >
186 <Residue VAL het= resseq=187 icode= >
187 <Residue TRP het= resseq=188 icode= >
188 <Residue LEU het= resseq=189 icode= >
189 <Residue ILE het= resseq=190 icode= >
190 <Residue GLY het= resseq=191 icode= >
191 <Residue SER het= resseq=192 icode= >
192 <Residue GLU het= resseq=193 icode= >
193 <Residue GLY het= resseq=194 icode= >
194 <Residue ALA het= resseq=195 icode= >
195 <Residue GLY het= resseq=196 icode= >
196 <Residue ILE het= resseq=197 icode= >
197 <Residue VAL het= resseq=198 icode= >
198 <Residue PRO het= resseq=199 icode= >
199 <Residue LEU het= resseq=200 icode= >
200 <Residue ASN het= resseq=201 icode= >
201 <Residue ILE het= resseq=202 icode= >
202 <Residue GLU het= resseq=203 icode= >
203 <Residue THR het= resseq=204 icode= >
204 <Residue LEU het= resseq=205 icode= >
205 <Residue LEU het= resseq=206 icode= >
206 <Residue PHE het= resseq=207 icode= >
207 <Residue MET het= resseq=208 icode= >
208 <Residue VAL het= resseq=209 icode= >
209 <Residue LEU het= resseq=210 icode= >
210 <Residue ASP het= resseq=211 icode= >
211 <Residue VAL het= resseq=212 icode= >
212 <Residue SER het= resseq=213 icode= >
213 <Residue ALA het= resseq=214 icode= >
214 <Residue LYS het= resseq=215 icode= >
215 <Residue VAL het= resseq=216 icode= >
216 <Residue GLY het= resseq=217 icode= >
217 <Residue PHE het= resseq=218 icode= >
218 <Residue GLY het= resseq=219 icode= >
219 <Residue LEU het= resseq=220 icode= >
220 <Residue ILE het= resseq=221 icode= >
221 <Residue LEU het= resseq=222 icode= >
222 <Residue LEU het= resseq=223 icode= >
223 <Residue ARG het= resseq=224 icode= >
224 <Residue SER het= resseq=225 icode= >
225 <Residue ARG het= resseq=226 icode= >
226 <Residue ALA het= resseq=227 icode= >
227 <Residue ILE het= resseq=228 icode= >
228 <Residue PHE het= resseq=229 icode= >
229 <Residue GLY het= resseq=230 icode= >
230 <Residue GLU het= resseq=231 icode= >
In [5]:
pdb_trajectory = read_trajectory_pdb_positions("openmmMovie.pdb")
oa = OpenMMAWSEMSystem(input_pdb_filename, chains='ABC', k_awsem=1.0, xml_filename="../../../awsem.xml") # k_awsem is an overall scaling factor that will affect the relevant temperature scales
# apply forces
# forceGroupTable_Rev = {11:"Con", 12:"Chain", 13:"Chi", 14:"Excluded", 15:"Rama", 16:"Direct",
# 17:"Burial", 18:"Mediated", 19:"Fragment"}
forceGroupTable = {"Con":11, "Chain":12, "Chi":13, "Excluded":14, "Rama":15, "Direct":16,
"Burial":17, "Mediated":18, "Contact":18, "Fragment":19, "Total":list(range(11, 20)),
"Water":[16, 18], "Q":1}
forces = [
# oa.q_value("crystal_structure-cleaned.pdb", "ABC"),
# oa.con_term(),
oa.chain_term(),
# oa.chi_term(),
# oa.excl_term(),
# oa.rama_term(),
# oa.rama_proline_term(),
# oa.direct_term(),
# oa.burial_term(),
# oa.mediated_term(),
# oa.fragment_memory_term(frag_location_pre="./")
]
oa.addForcesWithDefaultForceGroup(forces)
# start simulation
collision_rate = 5.0 / picoseconds
integrator = LangevinIntegrator(300*kelvin, 1/picosecond, 2*femtoseconds)
simulation = Simulation(oa.pdb.topology, oa.system, integrator, Platform.getPlatformByName("CPU"))
hi
hi
hi2
hi
hi
In [6]:
showEnergy = ["Q", "Con", "Chain", "Chi", "Excluded", "Rama", "Water", "Burial", "Fragment", "Total"]
# print("Steps", *showEnergy)
print(" ".join(["{0:<8s}".format(i) for i in ["Steps"] + showEnergy]))
for step, pdb in enumerate(pdb_trajectory):
simulation.context.setPositions(pdb.positions)
e = []
for term in showEnergy:
if type(forceGroupTable[term]) == list:
g = set(forceGroupTable[term])
elif forceGroupTable[term] == -1:
g = -1
else:
g = {forceGroupTable[term]}
state = simulation.context.getState(getEnergy=True, groups=g)
termEnergy = state.getPotentialEnergy().value_in_unit(kilocalories_per_mole)
e.append(termEnergy)
# print(*e)
print(" ".join([f"{step:<8}"] + ["{0:<8.2f}".format(i) for i in e]))
# print(forceGroupTable[term], state.getPotentialEnergy().value_in_unit(kilocalories_per_mole))
Steps Q Con Chain Chi Excluded Rama Water Burial Fragment Total
0 0.00 0.00 454725.48 0.00 0.00 0.00 0.00 0.00 0.00 454725.48
1 0.00 0.00 714121.74 0.00 0.00 0.00 0.00 0.00 0.00 714121.74
2 0.00 0.00 618193.42 0.00 0.00 0.00 0.00 0.00 0.00 618193.42
3 0.00 0.00 788246.49 0.00 0.00 0.00 0.00 0.00 0.00 788246.49
4 0.00 0.00 709550.92 0.00 0.00 0.00 0.00 0.00 0.00 709550.92
5 0.00 0.00 648436.60 0.00 0.00 0.00 0.00 0.00 0.00 648436.60
6 0.00 0.00 650457.36 0.00 0.00 0.00 0.00 0.00 0.00 650457.36
7 0.00 0.00 601024.96 0.00 0.00 0.00 0.00 0.00 0.00 601024.96
8 0.00 0.00 503666.88 0.00 0.00 0.00 0.00 0.00 0.00 503666.88
9 0.00 0.00 519254.80 0.00 0.00 0.00 0.00 0.00 0.00 519254.80
In [ ]:
In [ ]:
In [ ]:
In [1]:
chain
---------------------------------------------------------------------------
NameError Traceback (most recent call last)
<ipython-input-1-e6cfd032e834> in <module>()
----> 1 chain
NameError: name 'chain' is not defined
In [88]:
x = 0.0
print(f"---{x:8.3f}---")
print(len(f"{x:8.3f}"))
print(f"---{1:6.2f}---")
--- 0.000---
8
--- 1.00---
In [ ]:
line = "{type:4} {serialNumber:5} {AtomName:4} {ReidueName:3} {Chain:1}{ResId:4} {x:8.3f}{y:8.3f}{z:8.3f}{1:6.2f}{0:6.2f} {element} \n"
In [ ]:
In [4]:
file = "tmp.pdb"
fileTo = "test_tmp.pdb"
location = "/Users/weilu/Research/server/nov_2018/multi_chain/openmm/"
os.chdir(location)
i = 0
print(f"---{i:4}---")
def fixPDB(file="tmp.pdb", fileTo="test_tmp.pdb"):
# chain_length = [230, 461, 693, 0]
# chain = ["A","B","C"]
chain_length = [42, 84, 0]
chain = ["A","B"]
pos = 0
residue = 1
with open(fileTo, "w") as out:
with open(file, "r") as f:
for line in f:
tmp = list(line)
try:
residue = int(line[22:26])
except:
pass
if residue > chain_length[pos]:
pos += 1
out.write("TER \n")
i = residue-chain_length[pos-1]
r = f"{i:4}"
if len(tmp) > 21:
tmp[21] = chain[pos]
tmp[22:26] = r
new_line = "".join(tmp)
out.write(new_line)
a = open(location + "lammps_movie.pdb").read().split("END")
os.system("rm openmmMovie.pdb")
os.system(f"echo 'REMARK converted from awsem lammps output' >> openmmMovie.pdb")
for i in range(10):
with open("tmp.pdb", "w") as out:
out.write(a[i])
fixPDB()
input_pdb_filename, cleaned_pdb_filename =prepare_pdb("test_tmp.pdb", "ABC")
os.system(f"echo 'MODEL {i+1}' >> openmmMovie.pdb")
os.system("cat test_tmp-openmmawsem.pdb >> openmmMovie.pdb")
fixPDB()
--- 0---
In [5]:
parser = PDBParser()
structure = parser.get_structure('X', "/Users/weilu/openmmawsem/_local/gamma_secretase/crystal_structure.pdb")
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/StructureBuilder.py:89: PDBConstructionWarning: WARNING: Chain A is discontinuous at line 10616.
PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/StructureBuilder.py:89: PDBConstructionWarning: WARNING: Chain B is discontinuous at line 10887.
PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/StructureBuilder.py:89: PDBConstructionWarning: WARNING: Chain C is discontinuous at line 10930.
PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10973.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10973.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/Atom.py:98: PDBConstructionWarning: Used element 'N' for Atom (name=N) with given element ''
warnings.warn(msg, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10974.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10974.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/Atom.py:98: PDBConstructionWarning: Used element 'O' for Atom (name=O) with given element ''
warnings.warn(msg, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10975.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10975.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10976.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10976.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10977.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10977.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10978.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10978.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10979.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10979.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10980.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10980.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10981.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10981.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10982.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10982.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10983.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10983.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10984.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10984.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10985.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10985.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10986.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10986.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10987.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10987.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10988.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10988.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10989.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10989.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10990.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10990.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10991.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10991.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10992.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10992.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10993.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10993.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10994.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10994.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10995.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10995.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10996.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10996.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10997.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10997.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10998.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10998.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 10999.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 10999.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11000.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11000.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11001.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11001.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11002.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11002.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11003.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11003.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11004.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11004.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11005.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11005.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11006.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11006.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11007.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11007.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11008.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11008.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11009.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11009.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11010.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11010.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11011.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11011.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11012.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11012.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11013.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11013.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11014.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11014.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11015.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11015.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11016.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11016.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11017.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11017.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11018.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11018.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11019.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11019.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11020.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11020.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11021.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11021.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11022.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11022.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11023.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11023.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11024.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11024.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11025.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11025.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11026.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11026.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11027.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11027.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11028.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11028.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11029.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11029.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11030.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11030.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11031.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11031.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11032.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11032.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11033.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11033.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11034.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11034.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11035.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11035.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11036.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11036.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11037.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11037.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11038.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11038.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11039.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11039.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11040.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11040.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11041.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11041.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11042.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11042.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11043.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11043.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11044.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11044.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11045.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11045.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11046.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11046.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11047.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11047.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11048.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11048.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11049.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11049.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11050.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11050.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11051.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11051.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11052.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11052.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11053.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11053.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11054.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11054.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11055.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11055.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11056.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11056.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11057.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11057.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11058.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11058.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11059.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11059.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11060.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11060.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11061.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11061.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11062.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11062.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11063.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11063.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11064.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11064.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11065.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11065.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11066.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11066.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11067.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11067.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11068.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11068.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11069.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11069.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11070.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11070.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11071.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11071.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11072.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11072.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11073.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11073.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11074.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11074.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11075.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11075.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11076.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11076.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11077.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11077.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11078.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11078.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11079.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11079.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11080.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11080.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11081.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11081.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11082.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11082.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11083.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11083.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11084.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11084.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11085.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11085.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11086.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11086.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11087.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11087.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11088.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11088.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11089.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11089.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11090.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11090.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11091.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11091.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11092.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11092.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11093.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11093.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11094.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11094.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11095.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11095.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11096.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11096.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11097.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11097.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11098.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11098.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11099.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11099.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11100.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11100.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11101.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11101.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11102.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11102.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11103.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11103.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11104.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11104.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11105.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11105.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11106.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11106.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11107.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11107.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11108.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11108.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11109.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11109.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11110.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11110.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11111.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11111.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11112.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11112.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11113.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11113.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11114.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11114.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11115.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11115.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11116.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11116.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11117.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11117.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11118.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11118.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11119.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11119.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11120.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11120.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11121.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11121.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11122.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11122.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11123.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11123.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11124.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11124.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11125.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11125.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11126.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11126.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11127.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11127.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11128.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11128.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11129.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11129.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11130.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11130.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11131.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11131.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11132.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11132.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11133.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11133.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11134.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11134.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11135.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11135.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11136.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11136.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11137.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11137.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11138.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11138.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11139.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11139.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11140.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11140.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11141.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11141.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11142.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11142.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11143.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11143.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11144.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11144.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11145.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11145.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11146.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11146.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11147.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11147.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11148.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11148.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11149.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11149.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11150.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11150.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11151.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11151.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11152.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11152.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11153.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11153.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11154.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11154.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11155.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11155.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11156.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11156.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11157.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11157.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11158.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11158.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11159.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11159.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11160.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11160.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11161.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11161.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11162.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11162.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11163.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11163.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11164.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11164.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11165.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11165.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11166.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11166.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11167.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11167.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11168.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11168.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11169.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11169.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11170.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11170.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11171.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11171.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11172.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11172.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11173.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11173.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11174.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11174.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11175.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11175.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11176.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11176.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11177.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11177.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11178.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11178.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11179.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11179.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11180.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11180.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11181.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11181.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11182.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11182.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11183.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11183.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11184.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11184.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11185.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11185.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11186.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11186.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11187.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11187.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11188.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11188.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11189.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11189.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11190.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11190.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11191.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11191.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11192.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11192.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11193.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11193.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11194.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11194.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11195.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11195.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11196.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11196.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11197.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11197.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11198.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11198.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11199.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11199.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11200.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11200.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11201.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11201.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11202.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11202.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11203.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11203.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11204.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11204.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11205.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11205.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11206.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11206.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11207.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11207.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11208.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11208.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11209.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11209.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11210.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11210.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11211.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11211.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11212.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11212.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11213.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11213.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11214.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11214.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11215.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11215.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11216.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11216.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11217.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11217.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11218.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11218.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11219.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11219.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11220.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11220.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11221.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11221.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11222.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11222.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11223.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11223.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11224.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11224.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11225.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11225.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11226.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11226.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11227.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11227.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11228.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11228.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11229.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11229.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11230.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11230.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11231.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11231.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11232.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11232.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11233.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11233.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11234.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11234.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11235.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11235.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11236.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11236.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11237.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11237.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11238.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11238.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11239.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11239.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11240.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11240.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11241.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11241.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11242.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11242.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11243.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11243.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11244.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11244.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11245.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11245.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11246.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11246.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11247.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11247.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11248.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11248.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11249.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11249.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11250.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11250.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11251.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11251.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11252.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11252.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11253.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11253.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11254.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11254.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11255.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11255.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11256.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11256.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11257.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11257.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11258.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11258.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11259.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11259.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11260.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11260.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11261.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11261.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11262.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11262.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11263.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11263.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11264.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11264.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11265.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11265.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11266.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11266.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11267.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11267.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11268.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11268.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11269.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11269.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11270.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11270.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11271.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11271.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11272.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11272.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11273.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11273.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11274.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11274.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11275.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11275.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11276.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11276.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11277.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11277.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11278.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11278.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11279.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11279.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11280.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11280.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11281.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11281.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11282.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11282.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11283.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11283.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11284.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11284.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11285.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11285.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11286.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11286.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11287.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11287.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11288.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11288.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11289.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11289.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11290.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11290.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11291.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11291.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11292.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11292.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11293.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11293.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11294.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11294.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11295.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11295.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11296.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11296.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11297.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11297.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11298.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11298.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11299.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11299.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11300.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11300.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11301.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11301.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11302.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11302.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11303.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11303.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11304.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11304.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11305.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11305.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11306.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11306.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11307.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11307.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11308.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11308.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11309.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11309.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11310.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11310.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11311.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11311.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11312.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11312.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11313.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11313.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11314.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11314.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11315.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11315.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11316.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11316.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11317.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11317.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11318.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11318.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11319.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11319.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11320.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11320.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11321.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11321.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11322.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11322.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11323.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11323.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11324.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11324.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11325.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11325.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11326.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11326.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11327.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11327.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11328.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11328.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11329.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11329.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11330.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11330.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11331.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11331.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11332.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11332.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11333.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11333.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11334.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11334.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11335.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11335.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11336.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11336.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11337.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11337.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11338.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11338.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11339.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11339.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11340.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11340.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11341.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11341.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11342.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11342.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11343.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11343.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11344.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11344.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11345.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11345.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11346.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11346.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11347.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11347.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11348.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11348.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11349.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11349.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11350.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11350.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11351.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11351.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11352.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11352.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11353.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11353.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11354.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11354.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11355.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11355.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11356.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11356.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11357.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11357.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11358.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11358.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11359.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11359.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11360.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11360.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11361.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11361.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11362.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11362.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11363.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11363.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11364.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11364.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11365.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11365.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11366.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11366.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11367.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11367.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11368.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11368.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11369.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11369.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11370.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11370.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11371.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11371.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11372.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11372.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11373.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11373.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11374.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11374.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11375.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11375.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11376.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11376.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11377.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11377.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11378.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11378.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11379.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11379.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11380.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11380.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11381.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11381.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11382.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11382.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11383.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11383.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11384.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11384.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11385.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11385.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11386.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11386.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11387.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11387.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11388.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11388.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11389.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11389.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11390.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11390.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11391.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11391.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11392.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11392.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11393.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11393.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11394.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11394.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11395.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11395.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11396.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11396.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11397.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11397.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11398.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11398.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11399.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11399.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11400.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11400.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11401.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11401.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11402.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11402.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11403.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11403.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11404.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11404.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11405.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11405.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11406.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11406.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11407.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11407.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11408.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11408.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11409.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11409.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11410.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11410.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11411.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11411.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11412.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11412.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11413.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11413.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11414.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11414.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11415.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11415.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11416.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11416.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11417.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11417.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11418.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11418.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11419.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11419.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11420.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11420.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11421.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11421.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11422.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11422.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11423.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11423.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11424.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11424.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11425.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11425.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11426.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11426.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11427.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11427.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11428.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11428.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11429.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11429.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11430.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11430.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11431.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11431.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11432.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11432.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11433.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11433.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11434.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11434.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11435.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11435.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11436.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11436.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11437.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11437.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11438.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11438.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11439.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11439.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11440.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11440.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11441.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11441.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11442.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11442.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11443.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11443.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11444.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11444.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11445.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11445.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11446.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11446.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11447.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11447.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11448.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11448.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11449.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11449.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11450.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11450.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11451.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11451.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11452.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11452.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11453.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11453.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11454.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11454.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11455.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11455.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11456.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11456.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11457.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11457.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11458.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11458.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11459.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11459.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11460.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11460.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11461.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11461.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11462.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11462.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11463.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11463.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11464.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11464.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11465.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11465.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11466.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11466.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11467.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11467.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11468.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11468.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11469.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11469.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11470.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11470.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11471.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11471.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11472.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11472.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11473.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11473.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11474.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11474.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11475.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11475.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11476.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11476.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11477.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11477.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11478.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11478.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11479.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11479.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11480.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11480.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11481.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11481.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11482.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11482.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11483.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11483.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11484.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11484.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11485.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11485.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11486.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11486.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11487.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11487.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11488.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11488.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11489.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11489.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11490.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11490.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11491.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11491.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11492.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11492.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11493.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11493.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11494.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11494.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11495.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11495.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11496.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11496.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11497.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11497.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11498.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11498.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11499.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11499.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11500.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11500.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11501.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11501.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11502.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11502.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11503.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11503.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11504.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11504.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11505.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11505.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11506.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11506.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11507.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11507.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11508.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11508.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11509.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11509.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11510.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11510.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11511.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11511.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11512.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11512.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11513.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11513.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11514.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11514.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11515.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11515.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11516.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11516.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11517.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11517.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11518.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11518.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11519.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11519.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11520.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11520.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11521.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11521.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11522.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11522.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11523.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11523.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11524.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11524.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11525.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11525.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11526.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11526.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11527.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11527.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11528.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11528.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11529.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11529.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11530.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11530.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11531.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11531.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11532.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11532.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11533.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11533.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11534.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11534.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11535.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11535.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11536.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11536.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11537.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11537.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11538.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11538.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11539.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11539.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11540.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11540.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11541.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11541.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11542.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11542.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11543.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11543.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11544.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11544.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11545.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11545.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11546.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11546.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11547.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11547.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11548.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11548.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11549.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11549.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11550.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11550.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11551.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11551.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11552.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11552.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11553.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11553.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11554.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11554.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11555.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11555.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11556.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11556.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11557.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11557.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11558.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11558.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11559.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11559.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11560.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11560.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11561.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11561.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11562.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11562.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11563.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11563.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11564.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11564.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11565.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11565.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11566.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11566.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11567.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11567.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11568.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11568.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11569.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11569.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11570.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11570.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11571.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11571.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11572.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11572.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11573.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11573.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11574.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11574.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11575.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11575.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11576.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11576.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11577.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11577.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11578.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11578.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11579.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11579.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11580.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11580.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11581.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11581.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11582.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11582.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11583.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11583.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11584.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11584.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11585.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11585.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11586.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11586.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11587.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11587.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11588.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11588.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11589.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11589.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11590.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11590.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11591.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11591.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11592.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11592.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11593.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11593.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11594.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11594.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11595.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11595.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11596.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11596.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11597.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11597.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11598.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11598.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11599.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11599.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11600.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11600.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11601.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11601.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11602.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11602.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11603.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11603.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11604.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11604.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11605.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11605.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11606.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11606.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11607.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11607.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11608.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11608.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11609.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11609.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11610.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11610.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11611.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11611.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11612.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11612.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11613.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11613.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11614.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11614.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11615.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11615.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11616.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11616.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11617.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11617.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11618.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11618.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11619.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11619.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11620.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11620.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11621.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11621.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11622.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11622.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11623.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11623.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11624.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11624.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11625.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11625.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11626.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11626.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11627.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11627.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11628.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11628.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11629.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11629.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11630.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11630.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11631.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11631.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11632.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11632.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11633.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11633.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11634.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11634.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11635.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11635.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11636.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11636.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11637.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11637.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11638.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11638.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11639.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11639.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11640.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11640.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11641.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11641.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11642.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11642.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11643.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11643.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11644.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11644.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11645.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11645.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11646.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11646.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11647.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11647.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11648.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11648.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11649.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11649.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11650.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11650.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11651.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11651.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11652.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11652.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11653.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11653.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11654.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11654.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11655.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11655.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11656.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11656.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11657.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11657.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11658.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11658.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11659.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11659.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11660.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11660.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11661.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11661.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11662.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11662.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11663.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11663.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11664.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11664.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11665.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11665.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11666.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11666.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11667.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11667.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11668.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11668.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11669.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11669.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11670.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11670.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11671.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11671.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11672.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11672.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11673.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11673.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11674.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11674.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11675.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11675.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11676.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11676.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11677.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11677.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11678.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11678.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11679.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11679.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11680.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11680.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11681.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11681.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11682.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11682.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11683.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11683.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11684.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11684.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11685.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11685.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11686.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11686.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11687.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11687.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11688.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11688.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11689.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11689.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11690.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11690.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11691.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11691.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11692.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11692.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11693.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11693.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11694.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11694.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11695.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11695.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11696.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11696.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11697.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11697.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11698.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11698.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11699.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11699.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11700.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11700.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11701.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11701.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11702.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11702.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11703.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11703.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11704.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11704.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11705.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11705.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11706.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11706.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11707.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11707.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11708.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11708.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11709.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11709.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11710.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11710.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11711.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11711.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11712.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11712.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11713.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11713.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11714.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11714.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11715.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11715.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11716.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11716.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11717.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11717.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11718.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11718.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11719.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11719.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11720.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11720.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11721.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11721.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11722.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11722.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11723.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11723.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11724.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11724.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11725.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11725.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11726.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11726.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11727.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11727.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11728.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11728.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11729.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11729.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11730.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11730.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11731.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11731.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11732.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11732.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11733.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11733.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11734.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11734.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11735.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11735.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11736.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11736.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11737.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11737.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11738.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11738.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11739.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11739.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11740.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11740.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11741.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11741.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11742.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11742.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11743.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11743.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11744.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11744.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11745.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11745.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11746.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11746.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11747.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11747.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11748.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11748.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11749.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11749.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11750.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11750.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11751.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11751.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11752.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11752.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11753.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11753.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11754.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11754.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11755.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11755.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11756.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11756.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11757.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11757.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11758.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11758.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11759.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11759.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11760.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11760.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11761.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11761.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11762.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11762.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11763.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11763.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11764.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11764.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11765.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11765.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11766.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11766.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11767.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11767.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11768.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11768.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11769.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11769.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11770.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11770.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11771.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11771.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11772.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11772.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11773.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11773.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11774.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11774.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11775.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11775.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11776.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11776.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11777.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11777.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11778.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11778.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11779.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11779.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11780.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11780.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11781.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11781.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11782.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11782.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11783.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11783.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11784.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11784.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11785.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11785.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11786.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11786.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11787.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11787.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11788.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11788.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11789.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11789.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11790.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11790.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11791.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11791.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11792.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11792.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11793.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11793.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11794.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11794.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11795.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11795.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11796.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11796.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11797.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11797.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11798.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11798.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11799.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11799.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11800.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11800.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11801.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11801.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11802.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11802.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11803.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11803.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11804.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11804.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11805.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11805.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11806.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11806.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11807.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11807.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11808.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11808.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11809.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11809.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11810.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11810.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11811.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11811.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11812.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11812.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11813.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11813.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11814.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11814.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11815.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11815.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11816.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11816.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11817.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11817.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11818.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11818.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11819.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11819.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11820.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11820.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11821.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11821.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11822.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11822.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11823.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11823.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11824.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11824.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11825.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11825.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11826.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11826.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11827.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11827.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11828.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11828.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11829.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11829.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11830.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11830.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11831.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11831.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11832.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11832.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11833.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11833.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11834.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11834.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11835.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11835.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11836.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11836.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11837.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11837.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11838.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11838.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11839.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11839.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11840.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11840.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11841.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11841.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11842.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11842.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11843.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11843.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11844.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11844.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11845.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11845.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11846.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11846.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11847.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11847.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11848.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11848.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11849.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11849.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11850.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11850.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11851.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11851.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11852.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11852.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11853.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11853.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11854.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11854.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11855.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11855.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11856.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11856.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11857.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11857.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11858.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11858.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11859.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11859.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11860.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11860.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11861.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11861.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11862.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11862.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11863.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11863.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11864.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11864.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11865.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11865.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11866.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11866.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11867.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11867.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11868.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11868.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11869.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11869.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11870.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11870.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11871.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11871.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11872.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11872.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11873.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11873.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11874.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11874.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11875.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11875.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11876.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11876.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11877.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11877.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11878.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11878.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11879.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11879.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11880.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11880.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11881.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11881.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11882.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11882.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11883.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11883.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11884.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11884.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11885.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11885.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11886.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11886.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11887.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11887.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11888.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11888.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11889.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11889.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11890.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11890.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11891.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11891.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11892.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11892.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11893.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11893.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11894.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11894.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11895.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11895.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11896.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11896.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11897.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11897.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11898.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11898.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11899.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11899.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11900.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11900.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11901.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11901.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11902.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11902.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11903.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11903.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11904.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11904.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11905.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11905.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11906.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11906.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11907.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11907.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11908.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11908.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11909.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11909.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11910.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11910.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11911.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11911.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11912.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11912.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11913.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11913.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11914.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11914.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11915.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11915.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11916.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11916.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11917.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11917.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11918.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11918.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11919.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11919.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11920.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11920.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11921.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11921.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11922.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11922.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11923.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11923.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11924.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11924.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11925.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11925.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11926.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11926.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11927.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11927.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11928.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11928.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11929.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11929.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11930.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11930.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11931.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11931.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11932.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11932.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11933.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11933.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11934.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11934.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11935.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11935.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11936.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11936.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11937.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11937.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11938.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11938.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11939.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11939.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11940.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11940.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11941.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11941.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11942.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11942.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11943.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11943.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11944.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11944.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11945.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11945.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11946.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11946.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11947.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11947.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11948.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11948.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11949.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11949.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11950.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11950.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11951.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11951.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11952.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11952.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11953.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11953.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11954.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11954.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11955.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11955.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11956.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11956.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11957.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11957.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11958.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11958.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11959.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11959.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11960.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11960.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11961.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11961.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11962.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11962.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11963.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11963.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11964.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11964.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11965.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11965.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11966.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11966.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11967.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11967.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11968.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11968.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11969.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11969.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11970.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11970.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11971.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11971.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11972.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11972.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11973.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11973.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11974.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11974.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11975.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11975.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11976.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11976.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11977.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11977.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11978.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11978.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11979.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11979.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11980.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11980.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11981.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11981.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11982.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11982.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11983.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11983.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11984.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11984.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11985.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11985.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11986.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11986.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11987.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11987.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11988.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11988.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11989.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11989.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11990.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11990.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11991.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11991.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11992.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11992.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11993.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11993.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11994.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11994.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11995.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11995.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11996.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11996.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11997.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11997.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11998.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11998.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 11999.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 11999.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12000.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12000.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12001.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12001.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12002.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12002.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12003.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12003.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12004.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12004.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12005.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12005.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12006.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12006.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12007.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12007.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12008.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12008.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12009.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12009.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12010.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12010.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12011.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12011.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12012.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12012.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12013.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12013.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12014.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12014.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12015.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12015.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12016.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12016.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12017.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12017.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12018.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12018.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12019.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12019.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12020.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12020.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12021.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12021.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12022.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12022.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12023.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12023.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12024.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12024.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12025.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12025.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12026.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12026.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12027.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12027.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12028.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12028.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12029.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12029.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12030.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12030.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12031.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12031.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12032.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12032.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12033.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12033.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12034.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12034.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12035.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12035.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12036.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12036.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12037.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12037.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12038.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12038.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12039.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12039.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12040.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12040.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12041.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12041.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12042.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12042.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12043.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12043.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12044.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12044.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12045.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12045.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12046.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12046.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12047.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12047.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12048.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12048.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12049.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12049.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12050.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12050.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12051.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12051.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12052.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12052.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12053.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12053.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12054.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12054.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12055.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12055.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12056.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12056.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12057.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12057.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12058.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12058.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12059.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12059.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12060.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12060.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12061.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12061.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12062.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12062.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12063.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12063.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12064.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12064.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12065.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12065.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12066.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12066.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12067.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12067.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12068.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12068.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12069.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12069.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12070.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12070.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12071.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12071.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12072.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12072.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12073.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12073.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12074.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12074.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12075.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12075.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12076.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12076.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12077.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12077.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12078.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12078.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12079.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12079.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12080.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12080.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12081.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12081.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12082.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12082.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12083.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12083.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12084.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12084.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12085.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12085.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12086.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12086.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12087.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12087.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12088.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12088.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12089.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12089.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12090.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12090.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12091.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12091.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12092.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12092.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12093.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12093.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12094.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12094.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12095.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12095.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12096.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12096.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12097.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12097.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12098.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12098.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12099.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12099.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12100.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12100.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12101.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12101.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12102.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12102.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12103.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12103.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12104.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12104.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12105.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12105.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12106.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12106.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12107.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12107.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12108.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12108.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12109.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12109.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12110.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12110.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12111.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12111.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12112.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12112.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12113.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12113.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12114.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12114.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12115.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12115.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12116.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12116.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12117.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12117.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12118.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12118.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12119.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12119.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12120.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12120.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12121.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12121.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12122.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12122.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12123.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12123.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12124.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12124.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12125.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12125.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12126.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12126.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12127.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12127.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12128.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12128.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12129.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12129.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12130.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12130.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12131.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12131.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12132.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12132.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12133.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12133.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12134.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12134.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12135.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12135.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12136.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12136.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12137.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12137.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12138.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12138.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12139.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12139.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12140.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12140.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12141.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12141.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12142.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12142.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12143.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12143.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12144.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12144.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12145.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12145.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12146.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12146.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12147.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12147.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12148.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12148.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12149.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12149.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12150.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12150.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12151.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12151.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12152.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12152.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12153.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12153.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12154.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12154.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12155.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12155.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12156.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12156.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12157.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12157.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12158.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12158.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12159.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12159.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12160.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12160.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12161.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12161.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12162.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12162.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12163.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12163.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12164.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12164.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12165.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12165.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12166.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12166.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12167.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12167.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12168.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12168.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12169.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12169.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12170.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12170.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12171.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12171.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12172.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12172.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12173.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12173.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12174.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12174.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12175.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12175.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12176.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12176.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12177.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12177.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12178.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12178.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12179.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12179.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12180.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12180.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12181.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12181.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12182.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12182.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12183.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12183.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12184.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12184.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12185.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12185.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12186.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12186.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12187.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12187.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12188.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12188.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12189.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12189.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12190.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12190.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12191.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12191.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12192.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12192.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12193.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12193.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12194.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12194.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12195.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12195.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12196.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12196.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12197.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12197.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12198.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12198.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12199.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12199.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12200.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12200.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12201.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12201.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12202.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12202.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12203.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12203.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12204.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12204.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12205.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12205.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12206.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12206.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12207.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12207.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12208.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12208.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12209.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12209.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12210.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12210.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12211.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12211.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12212.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12212.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12213.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12213.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12214.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12214.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12215.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12215.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12216.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12216.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12217.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12217.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12218.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12218.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12219.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12219.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12220.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12220.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12221.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12221.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12222.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12222.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12223.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12223.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12224.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12224.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12225.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12225.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12226.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12226.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12227.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12227.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12228.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12228.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12229.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12229.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12230.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12230.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12231.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12231.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12232.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12232.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12233.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12233.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12234.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12234.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12235.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12235.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12236.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12236.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12237.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12237.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12238.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12238.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12239.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12239.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12240.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12240.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12241.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12241.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12242.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12242.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12243.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12243.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12244.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12244.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12245.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12245.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12246.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12246.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12247.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12247.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12248.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12248.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12249.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12249.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12250.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12250.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12251.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12251.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12252.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12252.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12253.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12253.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12254.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12254.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12255.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12255.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12256.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12256.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12257.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12257.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12258.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12258.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12259.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12259.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12260.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12260.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12261.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12261.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12262.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12262.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12263.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12263.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12264.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12264.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12265.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12265.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12266.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12266.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12267.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12267.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12268.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12268.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12269.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12269.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12270.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12270.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12271.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12271.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12272.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12272.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12273.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12273.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12274.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12274.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12275.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12275.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12276.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12276.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12277.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12277.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12278.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12278.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12279.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12279.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12280.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12280.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12281.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12281.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12282.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12282.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12283.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12283.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12284.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12284.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12285.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12285.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12286.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12286.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12287.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12287.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12288.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12288.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12289.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12289.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12290.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12290.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12291.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12291.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12292.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12292.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12293.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12293.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12294.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12294.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12295.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12295.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12296.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12296.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12297.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12297.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12298.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12298.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12299.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12299.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12300.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12300.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12301.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12301.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12302.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12302.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12303.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12303.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12304.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12304.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12305.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12305.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12306.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12306.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12307.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12307.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12308.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12308.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12309.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12309.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12310.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12310.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12311.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12311.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12312.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12312.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12313.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12313.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12314.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12314.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12315.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12315.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12316.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12316.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12317.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12317.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12318.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12318.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12319.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12319.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12320.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12320.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12321.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12321.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12322.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12322.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12323.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12323.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12324.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12324.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12325.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12325.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12326.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12326.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12327.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12327.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12328.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12328.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12329.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12329.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12330.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12330.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12331.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12331.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12332.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12332.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12333.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12333.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12334.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12334.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12335.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12335.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12336.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12336.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12337.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12337.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12338.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12338.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12339.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12339.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12340.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12340.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12341.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12341.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12342.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12342.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12343.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12343.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12344.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12344.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12345.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12345.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12346.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12346.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12347.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12347.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12348.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12348.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12349.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12349.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12350.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12350.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12351.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12351.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12352.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12352.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12353.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12353.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12354.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12354.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12355.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12355.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12356.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12356.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12357.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12357.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12358.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12358.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12359.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12359.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12360.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12360.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12361.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12361.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12362.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12362.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12363.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12363.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12364.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12364.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12365.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12365.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12366.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12366.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12367.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12367.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12368.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12368.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12369.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12369.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12370.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12370.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12371.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12371.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12372.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12372.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12373.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12373.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12374.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12374.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12375.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12375.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12376.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12376.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12377.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12377.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12378.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12378.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12379.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12379.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12380.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12380.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12381.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12381.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12382.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12382.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12383.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12383.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12384.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12384.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12385.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12385.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12386.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12386.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12387.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12387.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12388.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12388.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12389.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12389.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12390.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12390.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12391.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12391.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12392.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12392.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12393.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12393.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12394.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12394.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12395.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12395.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12396.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12396.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12397.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12397.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12398.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12398.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12399.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12399.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12400.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12400.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12401.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12401.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12402.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12402.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12403.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12403.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12404.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12404.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12405.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12405.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12406.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12406.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12407.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12407.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12408.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12408.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12409.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12409.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12410.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12410.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12411.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12411.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12412.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12412.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12413.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12413.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12414.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12414.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12415.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12415.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12416.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12416.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12417.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12417.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12418.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12418.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12419.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12419.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12420.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12420.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12421.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12421.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12422.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12422.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12423.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12423.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12424.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12424.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12425.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12425.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12426.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12426.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12427.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12427.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12428.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12428.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12429.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12429.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12430.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12430.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12431.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12431.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12432.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12432.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12433.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12433.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12434.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12434.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12435.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12435.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12436.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12436.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12437.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12437.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12438.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12438.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12439.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12439.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12440.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12440.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12441.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12441.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12442.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12442.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12443.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12443.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12444.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12444.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12445.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12445.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12446.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12446.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12447.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12447.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12448.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12448.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12449.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12449.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12450.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12450.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12451.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12451.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12452.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12452.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12453.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12453.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12454.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12454.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12455.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12455.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12456.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12456.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12457.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12457.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12458.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12458.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12459.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12459.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12460.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12460.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12461.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12461.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12462.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12462.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12463.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12463.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12464.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12464.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12465.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12465.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12466.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12466.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12467.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12467.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12468.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12468.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12469.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12469.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12470.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12470.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12471.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12471.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12472.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12472.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12473.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12473.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12474.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12474.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12475.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12475.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12476.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12476.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12477.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12477.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12478.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12478.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12479.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12479.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12480.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12480.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12481.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12481.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12482.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12482.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12483.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12483.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12484.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12484.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12485.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12485.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12486.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12486.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12487.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12487.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12488.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12488.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12489.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12489.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12490.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12490.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12491.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12491.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12492.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12492.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12493.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12493.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12494.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12494.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12495.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12495.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12496.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12496.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12497.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12497.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12498.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12498.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12499.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12499.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12500.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12500.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12501.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12501.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12502.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12502.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12503.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12503.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12504.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12504.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12505.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12505.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12506.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12506.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12507.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12507.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12508.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12508.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12509.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12509.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12510.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12510.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12511.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12511.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12512.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12512.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12513.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12513.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12514.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12514.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12515.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12515.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12516.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12516.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12517.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12517.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12518.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12518.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12519.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12519.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12520.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12520.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12521.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12521.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12522.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12522.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12523.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12523.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12524.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12524.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12525.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12525.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12526.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12526.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12527.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12527.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12528.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12528.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12529.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12529.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12530.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12530.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12531.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12531.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12532.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12532.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12533.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12533.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12534.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12534.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12535.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12535.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12536.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12536.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12537.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12537.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12538.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12538.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12539.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12539.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12540.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12540.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12541.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12541.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12542.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12542.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12543.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12543.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12544.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12544.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12545.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12545.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12546.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12546.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12547.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12547.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12548.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12548.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12549.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12549.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12550.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12550.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12551.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12551.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12552.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12552.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12553.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12553.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12554.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12554.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12555.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12555.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12556.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12556.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12557.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12557.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12558.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12558.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12559.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12559.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12560.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12560.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12561.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12561.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12562.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12562.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12563.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12563.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12564.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12564.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12565.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12565.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12566.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12566.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12567.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12567.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12568.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12568.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12569.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12569.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12570.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12570.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12571.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12571.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12572.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12572.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12573.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12573.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12574.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12574.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12575.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12575.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12576.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12576.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12577.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12577.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12578.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12578.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12579.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12579.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12580.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12580.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12581.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12581.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12582.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12582.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12583.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12583.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12584.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12584.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12585.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12585.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12586.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12586.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12587.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12587.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12588.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12588.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12589.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12589.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12590.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12590.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12591.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12591.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12592.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12592.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12593.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12593.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12594.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12594.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12595.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12595.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12596.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12596.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12597.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12597.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12598.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12598.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12599.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12599.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12600.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12600.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12601.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12601.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12602.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12602.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12603.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12603.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12604.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12604.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12605.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12605.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12606.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12606.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12607.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12607.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12608.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12608.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12609.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12609.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12610.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12610.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12611.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12611.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12612.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12612.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12613.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12613.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12614.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12614.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12615.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12615.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12616.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12616.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12617.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12617.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12618.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12618.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12619.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12619.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12620.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12620.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12621.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12621.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12622.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12622.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12623.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12623.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12624.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12624.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12625.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12625.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12626.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12626.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12627.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12627.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12628.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12628.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12629.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12629.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12630.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12630.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12631.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12631.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12632.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12632.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12633.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12633.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12634.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12634.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12635.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12635.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12636.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12636.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12637.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12637.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12638.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12638.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12639.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12639.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12640.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12640.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12641.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12641.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12642.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12642.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12643.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12643.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12644.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12644.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12645.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12645.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12646.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12646.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12647.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12647.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12648.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12648.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12649.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12649.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12650.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12650.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12651.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12651.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12652.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12652.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12653.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12653.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12654.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12654.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12655.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12655.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12656.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12656.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12657.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12657.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12658.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12658.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12659.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12659.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12660.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12660.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12661.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12661.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12662.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12662.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12663.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12663.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12664.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12664.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12665.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12665.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12666.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12666.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12667.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12667.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12668.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12668.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12669.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12669.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12670.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12670.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12671.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12671.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12672.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12672.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12673.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12673.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12674.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12674.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12675.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12675.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12676.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12676.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12677.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12677.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12678.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12678.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12679.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12679.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12680.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12680.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12681.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12681.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12682.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12682.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12683.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12683.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12684.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12684.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12685.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12685.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12686.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12686.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12687.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12687.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12688.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12688.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12689.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12689.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12690.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12690.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12691.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12691.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12692.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12692.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12693.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12693.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12694.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12694.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12695.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12695.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12696.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12696.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12697.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12697.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12698.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12698.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12699.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12699.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12700.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12700.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12701.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12701.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12702.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12702.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12703.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12703.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12704.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12704.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12705.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12705.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12706.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12706.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12707.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12707.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12708.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12708.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12709.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12709.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12710.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12710.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12711.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12711.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12712.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12712.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12713.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12713.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12714.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12714.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12715.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12715.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12716.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12716.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12717.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12717.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12718.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12718.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12719.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12719.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12720.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12720.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12721.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12721.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12722.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12722.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12723.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12723.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12724.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12724.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12725.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12725.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12726.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12726.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12727.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12727.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12728.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12728.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12729.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12729.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12730.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12730.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12731.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12731.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12732.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12732.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12733.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12733.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12734.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12734.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12735.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12735.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12736.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12736.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12737.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12737.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12738.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12738.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12739.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12739.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12740.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12740.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12741.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12741.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12742.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12742.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12743.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12743.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12744.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12744.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12745.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12745.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12746.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12746.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12747.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12747.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12748.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12748.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12749.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12749.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12750.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12750.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12751.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12751.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12752.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12752.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12753.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12753.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12754.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12754.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12755.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12755.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12756.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12756.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12757.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12757.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12758.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12758.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12759.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12759.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12760.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12760.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12761.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12761.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12762.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12762.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12763.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12763.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12764.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12764.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12765.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12765.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12766.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12766.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12767.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12767.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12768.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12768.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12769.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12769.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12770.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12770.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12771.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12771.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12772.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12772.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12773.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12773.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12774.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12774.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12775.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12775.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12776.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12776.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12777.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12777.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12778.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12778.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12779.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12779.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12780.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12780.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12781.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12781.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12782.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12782.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12783.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12783.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12784.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12784.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12785.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12785.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12786.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12786.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12787.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12787.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12788.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12788.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12789.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12789.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12790.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12790.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12791.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12791.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12792.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12792.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12793.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12793.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12794.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12794.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12795.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12795.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12796.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12796.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12797.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12797.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12798.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12798.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12799.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12799.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12800.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12800.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12801.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12801.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12802.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12802.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12803.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12803.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12804.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12804.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12805.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12805.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12806.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12806.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12807.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12807.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12808.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12808.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12809.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12809.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12810.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12810.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12811.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12811.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12812.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12812.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12813.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12813.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12814.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12814.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12815.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12815.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12816.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12816.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12817.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12817.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12818.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12818.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12819.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12819.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12820.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12820.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12821.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12821.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12822.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12822.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12823.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12823.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12824.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12824.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12825.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12825.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12826.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12826.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12827.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12827.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12828.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12828.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12829.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12829.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12830.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12830.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12831.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12831.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12832.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12832.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12833.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12833.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12834.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12834.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12835.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12835.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12836.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12836.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12837.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12837.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12838.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12838.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12839.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12839.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12840.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12840.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12841.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12841.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12842.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12842.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12843.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12843.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12844.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12844.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12845.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12845.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12846.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12846.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12847.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12847.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12848.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12848.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12849.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12849.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12850.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12850.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12851.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12851.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12852.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12852.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12853.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12853.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12854.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12854.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12855.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12855.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12856.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12856.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12857.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12857.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12858.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12858.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12859.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12859.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12860.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12860.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12861.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12861.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12862.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12862.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12863.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12863.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12864.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12864.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12865.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12865.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12866.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12866.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12867.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12867.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12868.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12868.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12869.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12869.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12870.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12870.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12871.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12871.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12872.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12872.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12873.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12873.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12874.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12874.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12875.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12875.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12876.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12876.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12877.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12877.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12878.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12878.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12879.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12879.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12880.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12880.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12881.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12881.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12882.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12882.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12883.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12883.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12884.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12884.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12885.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12885.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12886.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12886.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12887.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12887.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12888.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12888.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12889.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12889.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12890.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12890.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12891.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12891.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12892.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12892.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12893.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12893.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12894.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12894.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12895.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12895.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12896.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12896.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12897.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12897.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12898.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12898.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12899.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12899.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12900.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12900.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12901.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12901.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12902.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12902.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12903.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12903.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12904.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12904.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12905.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12905.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12906.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12906.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12907.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12907.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12908.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12908.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12909.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12909.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12910.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12910.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12911.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12911.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12912.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12912.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12913.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12913.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12914.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12914.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12915.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12915.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12916.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12916.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12917.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12917.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12918.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12918.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12919.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12919.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12920.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12920.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12921.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12921.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12922.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12922.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12923.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12923.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12924.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12924.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12925.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12925.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12926.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12926.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12927.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12927.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12928.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12928.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12929.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12929.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12930.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12930.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12931.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12931.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12932.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12932.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12933.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12933.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12934.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12934.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12935.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12935.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12936.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12936.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12937.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12937.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12938.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12938.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12939.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12939.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12940.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12940.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12941.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12941.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12942.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12942.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12943.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12943.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12944.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12944.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12945.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12945.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12946.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12946.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12947.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12947.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12948.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12948.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12949.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12949.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12950.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12950.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12951.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12951.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12952.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12952.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12953.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12953.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12954.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12954.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12955.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12955.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12956.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12956.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12957.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12957.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12958.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12958.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12959.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12959.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12960.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12960.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12961.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12961.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12962.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12962.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12963.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12963.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12964.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12964.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12965.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12965.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12966.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12966.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12967.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12967.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12968.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12968.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12969.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12969.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12970.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12970.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12971.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12971.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12972.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12972.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12973.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12973.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12974.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12974.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12975.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12975.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12976.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12976.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12977.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12977.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12978.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12978.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12979.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12979.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12980.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12980.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12981.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12981.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12982.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12982.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12983.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12983.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12984.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12984.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12985.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12985.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12986.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12986.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12987.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12987.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12988.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12988.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12989.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12989.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12990.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12990.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12991.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12991.
Exception ignored.
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% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12992.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12992.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12993.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12993.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12994.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12994.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12995.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12995.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12996.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12996.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12997.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12997.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12998.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12998.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 12999.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 12999.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13000.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13000.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13001.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13001.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13002.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13002.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13003.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13003.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13004.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13004.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13005.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13005.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13006.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13006.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13007.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13007.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13008.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13008.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13009.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13009.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13010.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13010.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13011.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13011.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13012.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13012.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13013.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13013.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13014.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13014.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13015.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13015.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13016.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13016.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13017.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13017.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13018.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13018.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13019.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13019.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13020.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13020.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13021.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13021.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13022.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13022.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13023.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13023.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13024.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13024.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13025.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13025.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13026.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13026.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13027.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13027.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13028.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13028.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13029.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13029.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13030.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13030.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13031.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13031.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13032.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13032.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13033.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13033.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13034.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13034.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13035.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13035.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13036.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13036.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13037.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13037.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13038.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13038.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13039.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13039.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13040.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13040.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13041.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13041.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13042.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13042.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13043.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13043.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13044.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13044.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13045.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13045.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13046.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13046.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13047.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13047.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13048.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13048.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13049.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13049.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13050.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13050.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13051.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13051.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13052.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13052.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13053.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13053.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13054.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13054.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13055.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13055.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13056.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13056.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13057.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13057.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13058.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13058.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13059.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13059.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13060.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13060.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13061.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13061.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13062.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13062.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13063.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13063.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13064.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13064.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13065.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13065.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13066.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13066.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13067.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13067.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13068.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13068.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13069.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13069.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13070.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13070.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13071.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13071.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13072.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13072.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13073.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13073.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13074.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13074.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13075.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13075.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13076.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13076.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13077.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13077.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13078.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13078.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13079.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13079.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13080.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13080.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13081.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13081.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13082.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13082.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13083.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13083.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13084.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13084.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13085.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13085.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13086.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13086.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13087.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13087.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13088.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13088.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13089.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13089.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13090.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13090.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13091.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13091.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13092.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13092.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13093.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13093.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13094.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13094.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13095.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13095.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13096.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13096.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13097.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13097.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13098.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13098.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13099.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13099.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13100.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13100.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13101.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13101.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13102.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13102.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13103.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13103.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13104.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13104.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13105.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13105.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13106.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13106.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13107.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13107.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13108.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13108.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13109.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13109.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13110.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13110.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13111.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13111.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13112.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13112.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13113.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13113.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13114.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13114.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13115.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13115.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13116.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13116.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13117.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13117.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13118.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13118.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13119.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13119.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13120.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13120.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13121.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13121.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13122.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13122.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13123.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13123.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13124.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13124.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13125.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13125.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13126.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13126.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13127.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13127.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13128.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13128.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13129.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13129.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13130.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13130.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13131.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13131.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13132.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13132.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13133.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13133.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13134.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13134.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13135.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13135.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13136.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13136.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13137.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13137.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13138.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13138.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13139.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13139.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13140.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13140.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13141.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13141.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13142.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13142.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13143.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13143.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13144.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13144.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13145.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13145.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13146.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13146.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13147.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13147.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13148.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13148.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13149.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13149.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13150.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13150.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13151.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13151.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13152.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13152.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13153.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13153.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13154.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13154.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13155.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13155.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13156.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13156.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13157.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13157.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13158.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13158.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13159.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13159.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13160.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13160.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13161.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13161.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13162.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13162.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13163.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13163.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13164.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13164.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13165.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13165.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13166.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13166.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13167.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13167.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13168.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13168.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13169.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13169.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13170.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13170.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13171.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13171.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13172.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13172.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13173.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13173.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13174.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13174.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13175.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13175.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13176.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13176.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13177.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13177.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13178.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13178.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13179.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13179.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13180.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13180.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13181.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13181.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13182.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13182.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13183.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13183.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13184.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13184.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13185.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13185.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13186.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13186.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13187.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13187.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13188.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13188.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13189.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13189.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13190.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13190.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13191.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13191.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13192.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13192.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13193.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13193.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13194.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13194.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13195.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13195.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13196.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13196.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13197.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13197.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13198.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13198.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13199.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13199.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13200.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13200.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13201.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13201.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13202.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13202.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13203.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13203.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13204.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13204.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13205.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13205.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13206.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13206.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13207.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13207.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13208.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13208.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13209.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13209.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13210.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13210.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13211.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13211.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13212.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13212.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13213.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13213.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13214.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13214.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13215.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13215.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13216.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13216.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13217.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13217.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13218.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13218.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13219.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13219.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13220.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13220.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13221.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13221.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13222.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13222.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13223.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13223.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13224.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13224.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13225.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13225.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13226.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13226.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13227.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13227.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13228.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13228.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13229.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13229.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13230.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13230.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13231.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13231.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13232.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13232.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13233.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13233.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13234.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13234.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13235.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13235.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13236.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13236.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13237.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13237.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13238.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13238.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13239.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13239.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13240.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13240.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13241.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13241.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13242.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13242.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13243.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13243.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13244.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13244.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13245.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13245.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13246.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13246.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13247.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13247.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13248.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13248.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13249.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13249.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13250.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13250.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13251.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13251.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13252.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13252.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13253.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13253.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13254.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13254.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13255.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13255.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13256.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13256.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13257.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13257.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13258.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13258.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13259.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13259.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13260.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13260.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13261.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13261.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13262.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13262.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13263.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13263.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13264.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13264.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13265.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13265.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13266.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13266.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13267.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13267.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13268.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13268.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13269.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13269.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13270.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13270.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13271.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13271.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13272.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13272.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13273.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13273.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13274.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13274.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13275.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13275.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13276.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13276.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13277.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13277.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13278.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13278.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13279.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13279.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13280.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13280.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13281.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13281.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13282.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13282.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13283.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13283.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13284.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13284.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13285.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13285.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13286.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13286.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13287.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13287.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13288.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13288.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13289.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13289.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13290.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13290.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13291.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13291.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13292.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13292.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13293.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13293.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13294.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13294.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13295.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13295.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13296.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13296.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13297.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13297.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13298.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13298.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13299.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13299.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13300.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13300.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13301.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13301.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13302.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13302.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13303.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13303.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13304.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13304.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13305.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13305.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13306.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13306.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13307.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13307.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13308.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13308.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13309.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13309.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13310.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13310.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13311.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13311.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13312.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13312.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13313.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13313.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13314.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13314.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13315.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13315.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13316.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13316.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13317.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13317.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13318.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13318.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13319.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13319.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13320.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13320.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13321.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13321.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13322.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13322.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13323.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13323.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13324.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13324.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13325.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13325.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13326.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13326.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13327.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13327.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13328.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13328.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13329.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13329.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13330.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13330.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13331.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13331.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13332.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13332.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13333.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13333.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13334.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13334.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13335.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13335.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13336.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13336.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13337.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13337.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13338.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13338.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13339.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13339.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13340.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13340.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13341.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13341.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13342.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13342.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13343.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13343.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13344.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13344.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13345.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13345.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13346.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13346.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13347.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13347.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13348.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13348.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13349.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13349.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13350.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13350.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13351.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13351.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13352.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13352.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13353.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13353.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13354.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13354.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13355.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13355.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13356.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13356.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13357.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13357.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13358.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13358.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13359.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13359.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13360.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13360.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13361.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13361.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13362.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13362.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13363.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13363.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13364.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13364.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13365.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13365.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13366.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13366.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13367.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13367.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13368.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13368.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13369.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13369.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13370.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13370.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13371.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13371.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13372.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13372.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13373.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13373.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13374.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13374.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13375.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13375.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13376.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13376.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13377.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13377.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13378.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13378.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13379.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13379.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13380.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13380.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13381.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13381.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13382.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13382.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13383.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13383.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13384.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13384.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13385.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13385.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13386.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13386.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13387.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13387.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13388.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13388.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13389.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13389.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13390.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13390.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13391.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13391.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13392.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13392.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13393.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13393.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13394.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13394.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13395.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13395.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13396.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13396.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13397.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13397.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13398.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13398.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13399.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13399.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13400.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13400.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13401.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13401.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13402.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13402.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13403.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13403.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13404.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13404.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13405.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13405.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13406.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13406.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13407.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13407.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13408.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13408.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13409.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13409.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13410.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13410.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13411.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13411.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13412.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13412.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13413.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13413.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13414.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13414.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13415.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13415.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13416.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13416.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13417.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13417.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13418.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13418.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13419.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13419.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13420.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13420.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13421.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13421.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13422.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13422.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13423.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13423.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13424.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13424.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13425.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13425.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13426.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13426.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13427.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13427.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13428.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13428.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13429.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13429.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13430.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13430.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13431.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13431.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13432.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13432.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13433.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13433.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13434.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13434.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13435.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13435.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13436.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13436.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13437.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13437.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13438.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13438.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13439.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13439.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13440.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13440.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13441.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13441.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13442.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13442.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13443.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13443.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13444.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13444.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13445.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13445.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13446.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13446.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13447.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13447.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13448.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13448.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13449.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13449.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13450.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13450.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13451.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13451.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13452.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13452.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13453.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13453.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13454.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13454.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13455.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13455.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13456.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13456.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13457.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13457.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13458.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13458.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13459.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13459.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13460.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13460.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13461.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13461.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13462.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13462.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13463.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13463.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13464.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13464.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13465.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13465.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13466.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13466.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13467.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13467.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13468.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13468.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13469.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13469.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13470.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13470.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13471.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13471.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13472.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13472.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13473.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13473.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13474.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13474.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13475.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13475.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13476.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13476.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13477.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13477.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13478.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13478.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13479.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13479.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13480.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13480.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13481.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13481.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13482.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13482.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13483.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13483.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13484.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13484.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13485.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13485.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13486.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13486.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13487.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13487.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13488.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13488.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13489.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13489.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13490.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13490.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13491.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13491.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13492.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13492.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13493.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13493.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13494.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13494.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13495.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13495.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13496.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13496.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13497.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13497.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13498.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13498.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13499.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13499.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13500.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13500.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13501.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13501.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13502.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13502.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13503.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13503.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13504.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13504.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13505.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13505.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13506.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13506.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13507.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13507.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13508.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13508.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13509.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13509.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13510.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13510.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13511.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13511.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13512.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13512.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13513.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13513.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13514.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13514.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13515.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13515.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13516.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13516.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13517.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13517.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13518.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13518.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13519.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13519.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13520.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13520.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13521.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13521.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13522.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13522.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13523.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13523.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13524.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13524.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13525.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13525.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13526.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13526.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13527.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13527.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13528.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13528.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13529.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13529.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13530.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13530.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13531.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13531.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13532.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13532.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13533.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13533.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13534.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13534.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13535.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13535.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13536.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13536.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13537.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13537.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13538.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13538.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13539.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13539.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13540.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13540.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13541.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13541.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13542.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13542.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13543.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13543.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13544.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13544.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13545.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13545.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13546.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13546.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13547.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13547.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13548.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13548.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13549.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13549.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13550.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13550.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13551.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13551.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13552.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13552.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13553.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13553.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13554.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13554.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13555.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13555.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13556.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13556.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13557.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13557.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13558.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13558.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13559.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13559.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13560.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13560.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13561.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13561.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13562.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13562.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13563.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13563.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13564.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13564.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13565.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13565.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13566.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13566.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13567.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13567.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13568.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13568.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13569.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13569.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13570.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13570.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13571.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13571.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13572.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13572.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13573.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13573.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13574.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13574.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13575.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13575.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13576.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13576.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13577.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13577.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13578.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13578.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13579.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13579.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13580.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13580.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13581.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13581.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13582.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13582.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13583.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13583.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13584.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13584.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13585.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13585.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13586.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13586.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13587.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13587.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13588.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13588.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13589.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13589.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13590.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13590.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13591.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13591.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13592.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13592.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13593.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13593.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13594.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13594.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13595.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13595.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13596.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13596.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13597.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13597.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13598.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13598.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13599.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13599.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13600.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13600.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13601.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13601.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13602.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13602.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13603.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13603.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13604.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13604.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13605.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13605.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13606.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13606.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13607.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13607.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13608.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13608.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13609.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13609.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13610.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13610.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13611.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13611.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13612.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13612.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13613.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13613.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13614.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13614.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13615.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13615.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13616.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13616.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13617.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13617.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13618.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13618.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13619.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13619.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13620.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13620.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13621.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13621.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13622.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13622.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13623.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13623.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13624.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13624.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13625.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13625.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13626.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13626.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13627.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13627.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13628.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13628.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13629.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13629.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13630.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13630.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13631.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13631.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13632.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13632.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13633.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13633.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13634.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13634.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13635.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13635.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13636.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13636.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13637.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13637.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13638.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13638.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13639.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13639.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13640.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13640.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13641.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13641.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13642.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13642.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13643.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13643.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13644.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13644.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13645.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13645.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13646.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13646.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13647.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13647.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13648.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13648.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13649.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13649.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13650.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13650.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13651.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13651.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13652.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13652.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13653.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13653.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13654.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13654.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13655.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13655.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13656.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13656.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13657.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13657.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13658.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13658.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13659.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13659.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13660.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13660.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13661.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13661.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13662.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13662.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13663.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13663.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13664.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13664.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13665.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13665.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13666.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13666.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13667.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13667.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13668.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13668.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13669.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13669.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13670.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13670.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13671.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13671.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13672.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13672.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13673.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13673.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13674.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13674.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13675.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13675.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13676.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13676.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13677.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13677.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13678.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13678.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13679.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13679.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13680.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13680.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13681.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13681.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13682.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13682.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13683.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13683.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13684.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13684.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13685.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13685.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13686.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13686.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13687.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13687.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13688.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13688.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13689.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13689.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13690.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13690.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13691.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13691.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13692.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13692.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13693.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13693.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13694.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13694.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13695.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13695.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13696.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13696.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13697.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13697.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13698.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13698.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13699.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13699.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13700.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13700.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13701.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13701.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13702.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13702.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13703.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13703.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13704.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13704.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13705.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13705.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13706.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13706.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13707.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13707.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13708.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13708.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13709.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13709.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13710.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13710.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13711.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13711.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13712.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13712.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13713.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13713.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13714.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13714.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13715.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13715.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13716.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13716.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13717.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13717.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13718.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13718.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13719.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13719.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13720.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13720.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13721.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13721.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13722.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13722.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13723.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13723.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13724.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13724.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13725.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13725.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13726.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13726.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13727.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13727.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13728.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13728.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13729.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13729.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13730.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13730.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13731.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13731.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13732.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13732.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13733.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13733.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13734.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13734.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13735.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13735.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13736.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13736.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13737.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13737.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13738.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13738.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13739.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13739.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13740.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13740.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13741.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13741.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13742.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13742.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13743.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13743.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13744.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13744.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13745.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13745.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13746.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13746.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13747.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13747.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13748.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13748.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13749.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13749.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13750.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13750.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13751.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13751.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13752.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13752.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13753.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13753.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13754.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13754.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13755.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13755.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13756.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13756.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13757.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13757.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13758.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13758.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13759.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13759.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13760.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13760.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13761.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13761.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13762.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13762.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13763.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13763.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13764.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13764.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13765.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13765.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13766.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13766.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13767.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13767.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13768.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13768.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13769.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13769.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13770.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13770.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13771.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13771.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13772.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13772.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13773.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13773.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13774.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13774.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13775.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13775.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13776.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13776.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13777.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13777.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13778.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13778.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13779.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13779.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13780.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13780.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13781.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13781.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13782.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13782.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13783.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13783.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13784.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13784.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13785.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13785.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13786.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13786.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13787.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13787.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13788.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13788.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13789.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13789.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13790.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13790.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13791.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13791.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13792.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13792.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13793.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13793.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13794.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13794.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13795.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13795.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13796.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13796.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13797.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13797.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13798.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13798.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13799.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13799.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13800.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13800.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13801.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13801.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13802.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13802.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13803.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13803.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13804.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13804.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13805.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13805.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13806.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13806.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13807.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13807.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13808.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13808.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13809.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13809.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13810.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13810.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13811.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13811.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13812.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13812.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13813.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13813.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13814.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13814.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13815.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13815.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13816.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13816.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13817.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13817.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13818.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13818.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13819.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13819.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13820.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13820.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13821.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13821.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13822.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13822.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13823.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13823.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13824.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13824.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13825.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13825.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13826.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13826.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13827.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13827.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13828.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13828.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13829.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13829.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13830.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13830.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13831.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13831.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13832.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13832.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13833.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13833.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13834.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13834.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13835.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13835.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13836.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13836.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13837.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13837.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13838.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13838.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13839.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13839.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13840.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13840.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13841.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13841.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13842.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13842.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13843.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13843.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13844.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13844.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13845.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13845.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13846.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13846.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13847.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13847.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13848.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13848.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13849.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13849.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13850.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13850.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13851.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13851.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13852.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13852.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13853.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13853.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13854.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13854.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13855.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13855.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13856.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13856.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13857.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13857.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13858.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13858.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13859.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13859.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13860.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13860.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13861.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13861.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13862.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13862.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13863.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13863.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13864.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13864.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13865.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13865.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13866.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13866.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13867.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13867.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13868.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13868.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13869.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13869.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13870.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13870.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13871.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13871.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13872.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13872.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13873.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13873.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13874.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13874.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13875.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13875.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13876.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13876.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13877.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13877.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13878.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13878.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13879.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13879.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13880.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13880.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13881.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13881.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13882.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13882.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13883.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13883.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13884.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13884.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13885.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13885.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13886.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13886.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13887.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13887.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13888.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13888.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13889.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13889.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13890.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13890.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13891.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13891.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13892.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13892.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13893.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13893.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13894.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13894.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13895.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13895.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13896.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13896.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13897.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13897.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13898.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13898.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13899.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13899.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13900.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13900.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13901.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13901.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13902.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13902.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13903.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13903.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13904.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13904.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13905.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13905.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13906.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13906.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13907.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13907.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13908.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13908.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13909.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13909.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13910.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13910.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13911.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13911.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13912.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13912.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13913.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13913.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13914.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13914.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13915.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13915.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13916.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13916.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13917.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13917.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13918.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13918.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13919.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13919.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13920.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13920.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13921.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13921.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13922.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13922.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13923.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13923.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13924.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13924.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13925.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13925.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13926.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13926.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13927.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13927.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13928.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13928.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13929.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13929.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13930.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13930.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13931.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13931.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13932.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13932.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13933.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13933.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13934.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13934.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13935.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13935.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13936.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13936.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13937.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13937.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13938.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13938.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13939.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13939.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13940.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13940.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13941.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13941.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13942.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13942.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13943.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13943.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13944.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13944.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13945.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13945.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13946.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13946.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13947.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13947.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13948.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13948.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13949.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13949.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13950.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13950.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13951.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13951.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13952.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13952.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13953.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13953.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13954.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13954.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13955.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13955.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13956.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13956.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13957.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13957.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13958.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13958.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13959.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13959.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13960.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13960.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13961.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13961.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13962.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13962.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13963.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13963.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13964.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13964.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13965.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13965.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13966.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13966.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13967.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13967.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13968.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13968.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13969.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13969.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13970.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13970.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13971.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13971.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13972.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13972.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13973.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13973.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13974.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13974.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13975.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13975.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13976.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13976.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13977.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13977.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13978.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13978.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13979.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13979.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13980.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13980.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13981.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13981.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13982.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13982.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13983.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13983.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13984.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13984.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13985.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13985.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13986.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13986.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13987.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13987.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13988.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13988.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13989.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13989.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13990.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13990.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13991.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13991.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13992.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13992.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13993.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13993.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13994.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13994.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13995.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13995.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13996.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13996.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13997.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13997.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing occupancy at line 13998.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
/Users/weilu/anaconda3/lib/python3.6/site-packages/Bio/PDB/PDBParser.py:289: PDBConstructionWarning: PDBConstructionException: Invalid or missing B factor at line 13998.
Exception ignored.
Some atoms or residues may be missing in the data structure.
% message, PDBConstructionWarning)
In [7]:
list(structure.get_chains())
Out[7]:
[<Chain id=A>, <Chain id=B>, <Chain id=C>, <Chain id=D>, <Chain id= >]
In [19]:
a = "ABCD AaaBC "
In [6]:
a = pd.read_csv("/Users/weilu/Dropbox/Comp557/Pacwar/python/submission/2018_nov27_3.csv", index_col=0)
In [9]:
a.columns
Out[9]:
Index(['gene1', 'score'], dtype='object')
In [11]:
for i, line in a.iterrows():
print(line["gene1"])
03100000001000003333311121121112221122131131131131
03130000001000003333312121121112221122131131131131
03100000001000003333311121121112221122131130131131
00100000001000003333121111111111111121131133121131
03130000001000003333311121121112221122131131131131
03100000001000003333311121121111221122131130131131
00100000001000003333121111111111111111131133121331
03130000001000003333312121121112221122131133221131
03100000001000003333311121121111221122131131131131
03100000001000003333311121121112221122131133231131
03100000001000003333311121121111221122131133121131
00100000001000000333112111111111111121131131131131
03100000001000003333311121121111221122131133231131
00100000001000000333121111111111111121131131131131
03130000001000003333311121121112221122131130131131
03130000001000003333312121121112221122131130131131
03130000001000003333313121121111221122131130131131
03100000001000003333311121121112221122131133221131
03130000001000003333312121121112221122131133231131
03130000001000003333311121121112221122131133221131
03130000001000003333313121121111221122131131131131
03130000001000003333313121121112221122131133231131
03130000001000003333311121121112221122131133231131
01310000111100200003131323323322322322310313113310
03100000001000003333311121121111221122131133221131
In [22]:
''.join(sorted(set(a.upper().replace(" ", ""))))
Out[22]:
'ABCD'
In [ ]:
Content source: luwei0917/awsemmd_script
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