In [1]:
import csv

In [3]:
with open("../data/references/rep82/rep82.tax") as inf:
    csv_inf = csv.reader(inf, delimiter="\t")
    with open("../data/references/rep82.fixed.tax", "w") as outf:
        for row in csv_inf:
            row[1] = row[1].replace(" ", "_")
            outf.write("\t".join(row) + "\n")