In [ ]:

    

%%capture capt
%time !emb15 --queries ../data/references/rep82_dusted/rep82_dusted.shear.fna --references ../data/references/rep82_dusted/rep82_dusted.edx --accelerator ../data/references/rep82_dusted/rep82_dusted.acx --output ../data/references/rep82_dusted/shear_results.b6 --id .98 --npenalize --skipambig --taxa_ncbi --taxonomy ../data/references/rep82_dusted/rep82_dusted.tax


    

In [1]:

    

print(capt)


    

    




---------------------------------------------------------------------------
NameError                                 Traceback (most recent call last)
<ipython-input-1-8aec449508c5> in <module>()
----> 1 print(capt)

NameError: name 'capt' is not defined