In [1]:

    

%run ~/relmapping/annot/notebooks/__init__.ipynb


    

    




/mnt/home3/jj374/anaconda36/lib/python3.6/site-packages/statsmodels/compat/pandas.py:56: FutureWarning: The pandas.core.datetools module is deprecated and will be removed in a future version. Please use the pandas.tseries module instead.
  from pandas.core import datetools






    




os.getcwd(): /mnt/beegfs/scratch_copy/ahringer/jj374/lab/relmapping

In [2]:

    

# df_bid_ <- all N2 data with library id, concentration, bid
def make_dnase_mnase_samples():
    fp_inp = 'workflows/Worm Accessibility Data Sets - accessibility.tsv'
    fp_out = 'dnase_mnase/dnase_mnase_samples.tsv'
    df_ = pd.read_csv(fp_inp, sep='\t').query('(Strain == "N2") & (Enzyme == "dnase" | Enzyme == "mnase")').sort_values(['Enzyme', 'Stage'])
    df_ = df_.loc[df_['Bioinformatics ID(s)'] == df_['Bioinformatics ID(s)']] # All sequenced libraries
    df_ = df_.loc[~(df_['Library series ID'] == 'EMB-JA0-N2-dnase-test')] # Early test data, partial digestion course
    df_ = df_.loc[~(df_['Library series ID'] == 'EMB-JA11-N2-dnase-S2.1xtraHS082')] # Pippen/beads tests
    df_ = df_.loc[~(df_['Library series ID'] == 'L2-JAX-N2-dnase-SX')] # Pippen/beads tests
    df_ = df_.loc[~(df_['Library series ID'] == 'EMB-JA12-N2-mnase-S2')] # Djem's time course
    df_.reset_index(drop=True).to_csv(fp_out, sep='\t', index=None)
    return df_

df_ = make_dnase_mnase_samples().rename(
    columns={
        'Library series ID': 'libid',
        'Bioinformatics ID(s)': 'bid',
        'Digestion conditions (homogenized)': 'conc',
    }
)[['libid', 'conc', 'bid']]

df_bid_ = pd.DataFrame(
    [(tup.libid, conc, bid) for tup in df_.itertuples() for conc, bid in zip(tup.conc.split(';'), tup.bid.split(';'))],
    columns=['libid', 'conc', 'bid'],
)
print('%d samples total' % (len(df_bid_),))
df_bid_.head()


    

    




334 samples total






    
Out[2]:







  

    

      

      
libid
      
conc
      
bid
    
  
  

    

      
0
      
EMB-JA10-N2-dnase-S1.1
      
0U_ml
      
mpg130214_3133
    
    

      
1
      
EMB-JA10-N2-dnase-S1.1
      
2.5U_ml
      
mpg130214_3134
    
    

      
2
      
EMB-JA10-N2-dnase-S1.1
      
5U_ml
      
mpg130214_3135
    
    

      
3
      
EMB-JA10-N2-dnase-S1.1
      
10U_ml
      
mpg130214_3136
    
    

      
4
      
EMB-JA10-N2-dnase-S1.1
      
25U_ml
      
mpg130214_3137
    
  

In [3]:

    

# df_geo_ <- list of libraries for GEO submission
df_geo_ = pd.DataFrame(config['dnase_mnase819_rep']).transpose().reset_index().rename(columns={'index': 'geoid', 'library_id': 'libid'})
df_geo_


    

    
Out[3]:







  

    

      

      
geoid
      
libid
      
protocol
      
source name
      
title
    
  
  

    

      
0
      
dnase_wt_emb_rep1
      
EMB-JA10-N2-dnase-S1.2
      
1
      
mixed embryos
      
wt_emb_DNase-seq_rep1
    
    

      
1
      
dnase_wt_emb_rep2
      
EMB-JA11-N2-dnase-S2
      
1
      
mixed embryos
      
wt_emb_DNase-seq_rep2
    
    

      
2
      
dnase_wt_l1_rep1
      
L1-JA2-N2-dnase-S1.1
      
1
      
L1 larvae
      
wt_L1_DNase-seq_rep1
    
    

      
3
      
dnase_wt_l1_rep2
      
L1-JA6-N2-dnase-S2
      
2
      
L1 larvae
      
wt_L1_DNase-seq_rep2
    
    

      
4
      
dnase_wt_l2_rep1
      
L2-JA7-N2-dnase-S1
      
2
      
L2 larvae
      
wt_L2_DNase-seq_rep1
    
    

      
5
      
dnase_wt_l2_rep2
      
L2-JA1-N2-dnase-S2
      
2
      
L2 larvae
      
wt_L2_DNase-seq_rep2
    
    

      
6
      
dnase_wt_l3_rep1
      
L3-JA15-N2-dnase-S1
      
1
      
L3 larvae
      
wt_L3_DNase-seq_rep1
    
    

      
7
      
dnase_wt_l3_rep2
      
L3-JA16-N2-dnase-S2
      
1
      
L3 larvae
      
wt_L3_DNase-seq_rep2
    
    

      
8
      
dnase_wt_l4_rep1
      
L4-JA3-N2-dnase-S1
      
2
      
L4 larvae
      
wt_L4_DNase-seq_rep1
    
    

      
9
      
dnase_wt_l4_rep2
      
L4-JA9-N2-dnase-S2
      
2
      
L4 larvae
      
wt_L4_DNase-seq_rep2
    
    

      
10
      
dnase_wt_ya_rep1
      
YA-JA4-N2-dnase-S1.1
      
1
      
young adults
      
wt_YA_DNase-seq_rep1
    
    

      
11
      
dnase_wt_ya_rep2
      
YA-JA5-N2-dnase-S2
      
2
      
young adults
      
wt_YA_DNase-seq_rep2
    
    

      
12
      
mnase_wt_emb_rep1
      
EMB-JA12-N2-mnase-S1
      
1
      
mixed embryos
      
wt_emb_MNase-seq_rep1
    
    

      
13
      
mnase_wt_emb_rep2
      
EMB-JA13-N2-mnase-S2.2
      
1
      
mixed embryos
      
wt_emb_MNase-seq_rep2
    
  

In [4]:

    

dnase_concentrations = config['dnase_concentrations']
mnase_concentrations = config['mnase_concentrations'] + ['8U_ml_2.4xAMPure']
q_ = '(conc in @dnase_concentrations) | (conc in @mnase_concentrations)'
#q_ = '(conc in @dnase_concentrations)'
df_merge_ = df_bid_.merge(df_geo_, on='libid', how='left').query('geoid == geoid').query(q_).reset_index(drop=True)

# Set 8U_ml_2.4xAMPure as the final 8U sample
assert len(df_merge_.query('conc == "8U_ml_2.4xAMPure"')) == 1
df_merge_.loc[df_merge_.conc == "8U_ml_2.4xAMPure", 'conc'] = "8U_ml"
assert len(df_merge_.query('conc == "8U_ml_2.4xAMPure"')) == 0

for libid_, df_libid_ in df_merge_.groupby('libid'):
    if 'dnase' in libid_:
        missing_ = set(config['dnase_concentrations']) - set(df_libid_['conc'])
        if len(missing_) == 0: missing_ = 'ok'
        print(libid_, '\t', missing_)
    elif 'mnase' in libid_:
        missing_ = set(config['mnase_concentrations']) - set(df_libid_['conc'])
        if len(missing_) == 0: missing_ = 'ok'
        print(libid_, '\t', missing_)


    

    




EMB-JA10-N2-dnase-S1.2 	 ok
EMB-JA11-N2-dnase-S2 	 ok
EMB-JA12-N2-mnase-S1 	 {'0.05U_ml', '0.025U_ml'}
EMB-JA13-N2-mnase-S2.2 	 ok
L1-JA2-N2-dnase-S1.1 	 ok
L1-JA6-N2-dnase-S2 	 ok
L2-JA1-N2-dnase-S2 	 ok
L2-JA7-N2-dnase-S1 	 ok
L3-JA15-N2-dnase-S1 	 {'5U_ml'}
L3-JA16-N2-dnase-S2 	 ok
L4-JA3-N2-dnase-S1 	 ok
L4-JA9-N2-dnase-S2 	 ok
YA-JA4-N2-dnase-S1.1 	 {'5U_ml'}
YA-JA5-N2-dnase-S2 	 ok

In [5]:

    

# Table: samples
df_geo1 = pd.DataFrame()
df_geo1['sample'] = list(map(lambda index: 'Sample %d' % (index + 1,), df_merge_.index))
df_geo1['title'] = list(map(lambda title, conc: '%s_%s' % (title, conc), df_merge_['title'], df_merge_['conc']))
df_geo1['source name'] = df_merge_['source name']
df_geo1['organism'] = 'C. elegans'
df_geo1['characteristics: strain'] = 'wild-type N2'
df_geo1['molecule'] = 'genomic DNA'
df_geo1['protocol'] = df_merge_['protocol']
df_geo1['raw_file_1'] = list(map(lambda geoid, conc: '%s_%s.read1.fastq.gz' % (geoid, conc), df_merge_['geoid'], df_merge_['conc']))
df_geo1['raw_file_2'] = list(map(lambda geoid, conc: '%s_%s.read2.fastq.gz' % (geoid, conc), df_merge_['geoid'], df_merge_['conc']))
df_geo1['bid'] = df_merge_['bid']
df_geo1.to_csv('dnase_mnase819_geo/dnase_mnase_geo1_samples.tsv', index=False, header=True, sep='\t')


    

In [16]:

    

# Table: raw files
def md5sum_r1(bid):
    fp = pf(bid, 'md5sum_r1', '.txt', 'dnase_mnase')
    md5 = !cat {fp} | awk '{{print $$1}}'
    return md5[0]

def md5sum_r2(bid):
    fp = pf(bid, 'md5sum_r2', '.txt', 'dnase_mnase')
    md5 = !cat {fp} | awk '{{print $$1}}'
    return md5[0]

def readlen_r1(bid):
    fp = pf(bid, 'readlen_r1', '.txt', 'dnase_mnase')
    readlen = !cat {fp}
    return readlen[0]

def readlen_r2(bid):
    fp = pf(bid, 'readlen_r2', '.txt', 'dnase_mnase')
    readlen = !cat {fp}
    return readlen[0]

df_geo3_r1 = pd.DataFrame()
df_geo3_r2 = pd.DataFrame()
df_geo3_r1['file'] = df_geo1['raw_file_1'].tolist()
df_geo3_r2['file'] = df_geo1['raw_file_2'].tolist()
df_geo3_r1['file_type'] = 'fastq'
df_geo3_r2['file_type'] = 'fastq'
df_geo3_r1['checksum'] = list(map(md5sum_r1, df_geo1['bid']))
df_geo3_r2['checksum'] = list(map(md5sum_r2, df_geo1['bid']))
df_geo3_r1['readlen'] = list(map(readlen_r1, df_geo1['bid']))
df_geo3_r2['readlen'] = list(map(readlen_r2, df_geo1['bid']))

df_geo3_ = pd.concat([df_geo3_r1, df_geo3_r2]).reset_index(drop=True)
df_geo3_['instrument_model'] = 'HiSeq2000'
df_geo3_['single_or_paired'] = 'paired-end'

df_geo3 = df_geo3_[['file', 'file_type', 'checksum', 'instrument_model', 'readlen', 'single_or_paired']]
df_geo3.to_csv('dnase_mnase819_geo/dnase_mnase_geo3_raw.tsv', index=False, header=True, sep='\t')


    

In [17]:

    

# Table: paired-end mean/stddev
def fmean(bid):
    fp = pf(bid, 'tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.fsizes', '.txt', 'dnase_mnase')
    df = pd.read_csv(fp, sep='\t', names=['size', 'count'])#.head()
    l_len = list(itertools.chain(*[itertools.repeat(size, count) for (size, count) in zip(df['size'], df['count'])]))
    mean1 = np.average(df['size'], weights=df['count'])
    #mean2 = np.mean(l_len)
    #print(mean1, mean2)
    return '%d' % (mean1,)

def fstd(bid):
    fp = pf(bid, 'tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.fsizes', '.txt', 'dnase_mnase')
    df = pd.read_csv(fp, sep='\t', names=['size', 'count'])#.head()
    l_len = list(itertools.chain(*[itertools.repeat(size, count) for (size, count) in zip(df['size'], df['count'])]))
    return '%d' % (np.std(l_len),)

df_geo4 = pd.DataFrame()
df_geo4['file1'] = df_geo1['raw_file_1']
df_geo4['file2'] = df_geo1['raw_file_2']
df_geo4['avg'] = list(map(fmean, df_geo1['bid']))
df_geo4['std'] = list(map(fstd, df_geo1['bid']))
df_geo4.to_csv('dnase_mnase819_geo/dnase_mnase_geo4_paired_end.tsv', index=False, header=True, sep='\t')


    

In [21]:

    

# Table: processed
def processed_rep1_(cond_conc):
    cond, conc = cond_conc
    (assay, stage) = (cond[:5], cond[6:])
    assay = {'dnase': 'DNase-seq', 'mnase': 'MNase-seq'}[assay]
    stage = {'wt_emb': 'Embryo', 'wt_l1': 'L1', 'wt_l2': 'L2', 'wt_l3': 'L3', 'wt_l4': 'L4', 'wt_ya': 'YA',}[stage]
    df_rep1 = df_merge_.query('(geoid == "%s_rep1") & (conc == "%s")' % (cond, conc))
    description = 'Normalized %s %s at %s (replicate 1)' % (stage, assay, conc)
    fp_out = 'dnase_mnase819_geo/tracks/%s_rep1_%s.bw' % (cond, conc)
    fn_out = '%s_rep1_%s.bw' % (cond, conc)
    if len(df_rep1) != 1:
        print('skip: %s, rep1, %s' % (cond, conc))
        return (fn_out, 'bigWig', None, description)
    else:
        step_ = 'tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300'
        fp_inp1 = pf(df_rep1.iloc[0].bid, step_, '_treat_pileup.bw', 'dnase_mnase')
        if not os.path.isfile(fp_out):
            !scripts/bigWiggleTools.ipy write {fp_out} scale 0.1 bin 10 mean {fp_inp1}
        md5_ = !md5sum {fp_out} | awk '{{print $$1}}'
        return (fn_out, 'bigWig', md5_[0], description)

def processed_rep2_(cond_conc):
    cond, conc = cond_conc
    (assay, stage) = (cond[:5], cond[6:])
    assay = {'dnase': 'DNase-seq', 'mnase': 'MNase-seq'}[assay]
    stage = {'wt_emb': 'Embryo', 'wt_l1': 'L1', 'wt_l2': 'L2', 'wt_l3': 'L3', 'wt_l4': 'L4', 'wt_ya': 'YA',}[stage]
    df_rep2 = df_merge_.query('(geoid == "%s_rep2") & (conc == "%s")' % (cond, conc))
    description = 'Normalized %s %s at %s (replicate 2)' % (stage, assay, conc)
    fp_out = 'dnase_mnase819_geo/tracks/%s_rep2_%s.bw' % (cond, conc)
    fn_out = '%s_rep2_%s.bw' % (cond, conc)
    if len(df_rep2) != 1:
        print('skip: %s, rep2, %s' % (cond, conc))
        return (fn_out, 'bigWig', None, description)
    else:
        step_ = 'tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300'
        fp_inp2 = pf(df_rep2.iloc[0].bid, step_, '_treat_pileup.bw', 'dnase_mnase')
        if not os.path.isfile(fp_out):
            !scripts/bigWiggleTools.ipy write {fp_out} scale 0.1 bin 10 {fp_inp2}
        md5_ = !md5sum {fp_out} | awk '{{print $$1}}'
        return (fn_out, 'bigWig', md5_[0], description)

df_geo2 = pd.DataFrame.from_records(
    pmap(processed_rep1_, [('dnase_wt_emb', conc) for conc in config['dnase_concentrations']], n_jobs=10) +
    pmap(processed_rep2_, [('dnase_wt_emb', conc) for conc in config['dnase_concentrations']], n_jobs=10) +
    pmap(processed_rep1_, [('dnase_wt_l1', conc) for conc in config['dnase_concentrations']], n_jobs=10) +
    pmap(processed_rep2_, [('dnase_wt_l1', conc) for conc in config['dnase_concentrations']], n_jobs=10) +
    pmap(processed_rep1_, [('dnase_wt_l2', conc) for conc in config['dnase_concentrations']], n_jobs=10) +
    pmap(processed_rep2_, [('dnase_wt_l2', conc) for conc in config['dnase_concentrations']], n_jobs=10) +
    pmap(processed_rep1_, [('dnase_wt_l3', conc) for conc in config['dnase_concentrations']], n_jobs=10) +
    pmap(processed_rep2_, [('dnase_wt_l3', conc) for conc in config['dnase_concentrations']], n_jobs=10) +
    pmap(processed_rep1_, [('dnase_wt_l4', conc) for conc in config['dnase_concentrations']], n_jobs=10) +
    pmap(processed_rep2_, [('dnase_wt_l4', conc) for conc in config['dnase_concentrations']], n_jobs=10) +
    pmap(processed_rep1_, [('dnase_wt_ya', conc) for conc in config['dnase_concentrations']], n_jobs=10) +
    pmap(processed_rep2_, [('dnase_wt_ya', conc) for conc in config['dnase_concentrations']], n_jobs=10) +
    pmap(processed_rep1_, [('mnase_wt_emb', conc) for conc in config['mnase_concentrations']], n_jobs=10) +
    pmap(processed_rep2_, [('mnase_wt_emb', conc) for conc in config['mnase_concentrations']], n_jobs=10)
, columns=['file_name', 'file_type', 'md5', 'description']).query('md5 == md5')
df_geo2.to_csv('dnase_mnase819_geo/dnase_mnase_geo2_processed.tsv', index=False, header=True, sep='\t')
df_geo2


    

    




]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_200U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_200U_ml.bwb7oym3ou.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130828_4173.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_400U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_400U_ml.bw2br06w29.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130828_4174.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_10U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_10U_ml.bw4s0sww8f.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130828_4169.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_400U_ml.bwd6tb32nb.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_400U_ml.bwd6tb32nb.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130828_4174.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_200U_ml.bw1tecp5wk.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_200U_ml.bw1tecp5wk.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130828_4173.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_2.5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_2.5U_ml.bw0kd65h10.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130828_4167.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_100U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_100U_ml.bw51exgiyw.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130828_4172.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_5U_ml.bwt3pt0qo7.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130828_4168.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_5U_ml.bwwj5bogg7.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_5U_ml.bwwj5bogg7.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130828_4168.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_10U_ml.bwjncdn_vf.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_10U_ml.bwjncdn_vf.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130828_4169.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_2.5U_ml.bwunb0ujsh.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_2.5U_ml.bwunb0ujsh.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130828_4167.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_100U_ml.bwlgqztkju.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_100U_ml.bwlgqztkju.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130828_4172.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_25U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_25U_ml.bwkkvqrwr0.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130828_4170.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_25U_ml.bwt913okhw.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_25U_ml.bwt913okhw.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130828_4170.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_50U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_50U_ml.bw5_tnw7ru.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130828_4171.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_800U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_800U_ml.bw3qv0v38z.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130828_4175.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_50U_ml.bwy5h3_tud.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_50U_ml.bwy5h3_tud.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130828_4171.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_800U_ml.bwwsgef8xg.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_emb_rep1_800U_ml.bwwsgef8xg.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130828_4175.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw






    




[Parallel(n_jobs=10)]: Done   9 out of   9 | elapsed:   51.3s finished






    




]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_400U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_400U_ml.bwed23357_.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130705_3284.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_200U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_200U_ml.bwa4pkamt6.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130705_3283.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_2.5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_2.5U_ml.bwfnh4p3gx.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130828_4176.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_50U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_50U_ml.bwkpk0b7an.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130705_3281.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_50U_ml.bw3g5zryzq.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_50U_ml.bw3g5zryzq.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130705_3281.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_200U_ml.bwbd94ij8d.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_200U_ml.bwbd94ij8d.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130705_3283.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_400U_ml.bwtr15h_rt.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_400U_ml.bwtr15h_rt.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130705_3284.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_2.5U_ml.bw38kyvqm7.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_2.5U_ml.bw38kyvqm7.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130828_4176.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_25U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_25U_ml.bwhzljfd38.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130705_3280.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_5U_ml.bwe4cbxdnq.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130828_4177.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_100U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_100U_ml.bw_08bnncu.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130705_3282.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_5U_ml.bwssmq0cej.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_5U_ml.bwssmq0cej.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130828_4177.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_800U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_800U_ml.bw_fz8l9bv.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130705_3285.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_25U_ml.bwpg_eelwe.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_25U_ml.bwpg_eelwe.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130705_3280.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_100U_ml.bwrjrkkxlu.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_100U_ml.bwrjrkkxlu.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130705_3282.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_10U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_10U_ml.bwy6i8_ys1.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130705_3279.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_10U_ml.bwo9wvz236.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_10U_ml.bwo9wvz236.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130705_3279.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_800U_ml.bwou23yzrv.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_800U_ml.bwou23yzrv.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130705_3285.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
bedGraph error line 7958793 of dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_200U_ml.bwbd94ij8d.tmp.wig: chromosome chrV has size 20924149 but item ends at 20924150
bedGraph error line 9690930 of dnase_mnase819_geo/tracks/dnase_wt_emb_rep2_200U_ml.bwbd94ij8d.tmp.wig: chromosome chrX has size 17718866 but item ends at 17718870






    




[Parallel(n_jobs=10)]: Done   9 out of   9 | elapsed:   49.9s finished






    




]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_25U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_25U_ml.bwmyz4elt5.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140522_5038.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_2.5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_2.5U_ml.bwngy92phv.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140522_5035.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_400U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_400U_ml.bwwd_xo40v.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140522_5042.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_25U_ml.bwxtuyyj3y.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_25U_ml.bwxtuyyj3y.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140522_5038.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_200U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_200U_ml.bww_vdppaw.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140522_5041.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_400U_ml.bw2cvm53b1.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_400U_ml.bw2cvm53b1.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140522_5042.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_5U_ml.bwdj_h_s5t.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140522_5036.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_50U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_50U_ml.bwlvu7fqur.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140522_5039.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_10U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_10U_ml.bwbvvthzkw.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140522_5037.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_5U_ml.bwlkdpoph3.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_5U_ml.bwlkdpoph3.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140522_5036.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_50U_ml.bwxwp0r1nf.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_50U_ml.bwxwp0r1nf.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140522_5039.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_100U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_100U_ml.bwoy3_ihoh.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140522_5040.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_2.5U_ml.bwb662qqve.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_2.5U_ml.bwb662qqve.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140522_5035.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_200U_ml.bwih4s6oio.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_200U_ml.bwih4s6oio.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140522_5041.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_10U_ml.bw_zf0kbjy.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_10U_ml.bw_zf0kbjy.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140522_5037.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_100U_ml.bwea5_lzlo.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_100U_ml.bwea5_lzlo.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140522_5040.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_800U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_800U_ml.bwmjpya_d1.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140522_5043.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_800U_ml.bw7u_23za2.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_800U_ml.bw7u_23za2.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140522_5043.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
bedGraph error line 9657156 of dnase_mnase819_geo/tracks/dnase_wt_l1_rep1_100U_ml.bwea5_lzlo.tmp.wig: chromosome chrX has size 17718866 but item ends at 17718870






    




[Parallel(n_jobs=10)]: Done   9 out of   9 | elapsed:   50.3s finished






    




]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_200U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_200U_ml.bwelw9svqu.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7049.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_100U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_100U_ml.bwdk143hr1.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7048.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_5U_ml.bw1b30hvdg.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7044.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_100U_ml.bwjmd868wh.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_100U_ml.bwjmd868wh.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7048.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_200U_ml.bwiaaq587b.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_200U_ml.bwiaaq587b.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7049.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_5U_ml.bwz5kbqprn.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_5U_ml.bwz5kbqprn.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7044.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_10U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_10U_ml.bwrcyqlic3.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7045.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_2.5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_2.5U_ml.bwpq5r31ps.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7043.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_2.5U_ml.bw6i2gk4ld.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_2.5U_ml.bw6i2gk4ld.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7043.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_50U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_50U_ml.bwveapqyyx.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7047.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_10U_ml.bwvt031fwl.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_10U_ml.bwvt031fwl.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7045.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_400U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_400U_ml.bwi5_7oa_z.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7050.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_25U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_25U_ml.bwfp83nq8u.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7046.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_50U_ml.bw1cayz4t4.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_50U_ml.bw1cayz4t4.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7047.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_25U_ml.bwos1b40im.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_25U_ml.bwos1b40im.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7046.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_800U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_800U_ml.bwsugci6k6.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7051.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_400U_ml.bwnb1_rt4w.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_400U_ml.bwnb1_rt4w.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7050.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_800U_ml.bwmo5psosh.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l1_rep2_800U_ml.bwmo5psosh.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7051.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw






    




[Parallel(n_jobs=10)]: Done   9 out of   9 | elapsed:   43.4s finished






    




]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_50U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_50U_ml.bwevtzj4_w.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6311.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_400U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_400U_ml.bwjb7exy7u.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6314.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_50U_ml.bwl2_o0r_u.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_50U_ml.bwl2_o0r_u.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6311.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_400U_ml.bwy_ta6dop.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_400U_ml.bwy_ta6dop.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6314.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_800U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_800U_ml.bwbsvix4ef.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6315.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_100U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_100U_ml.bw9u3wxa37.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6312.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_100U_ml.bwqtvcbi5_.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_100U_ml.bwqtvcbi5_.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6312.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_5U_ml.bw7o24xpau.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6308.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_2.5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_2.5U_ml.bw3efz2jd7.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6307.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_25U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_25U_ml.bwvep2sri7.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6310.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_25U_ml.bwsvwc5yo0.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_25U_ml.bwsvwc5yo0.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6310.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_5U_ml.bwrfnge1bj.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_5U_ml.bwrfnge1bj.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6308.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_200U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_200U_ml.bwyi54osig.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6313.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_10U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_10U_ml.bwahmmcvpa.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6309.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_800U_ml.bw37zqkkhg.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_800U_ml.bw37zqkkhg.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6315.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_10U_ml.bwe93p7p0v.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_10U_ml.bwe93p7p0v.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6309.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_2.5U_ml.bwjy48un6y.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_2.5U_ml.bwjy48un6y.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6307.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_200U_ml.bwpm6kmt45.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l2_rep1_200U_ml.bwpm6kmt45.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6313.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw






    




[Parallel(n_jobs=10)]: Done   9 out of   9 | elapsed:   39.8s finished






    




]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_100U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_100U_ml.bwqi95rj_p.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150521_6958.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_100U_ml.bwoadpx681.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_100U_ml.bwoadpx681.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150521_6958.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_5U_ml.bwywvdznvz.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150521_6954.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_25U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_25U_ml.bwhr5ka08g.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150521_6956.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_10U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_10U_ml.bwztoo4stw.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150521_6955.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_25U_ml.bwg6q843td.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_25U_ml.bwg6q843td.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150521_6956.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_10U_ml.bw_a11jnmz.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_10U_ml.bw_a11jnmz.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150521_6955.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_2.5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_2.5U_ml.bw56u67eq1.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150521_6953.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_400U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_400U_ml.bwicr1io23.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150521_6960.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_200U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_200U_ml.bw261mtm2b.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150521_6959.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_50U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_50U_ml.bw_epqm661.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150521_6957.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_2.5U_ml.bwt5jwngtl.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_2.5U_ml.bwt5jwngtl.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150521_6953.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_800U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_800U_ml.bwvwz2mdhz.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150521_6961.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_800U_ml.bww7ksvou0.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_800U_ml.bww7ksvou0.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150521_6961.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_50U_ml.bwbs3r2pt6.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_50U_ml.bwbs3r2pt6.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150521_6957.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_200U_ml.bw6hvfh66l.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_200U_ml.bw6hvfh66l.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150521_6959.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_5U_ml.bwdfxo3dsr.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_5U_ml.bwdfxo3dsr.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150521_6954.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_400U_ml.bwbgj6cluf.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l2_rep2_400U_ml.bwbgj6cluf.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150521_6960.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw






    




[Parallel(n_jobs=10)]: Done   9 out of   9 | elapsed:   42.7s finished






    




skip: dnase_wt_l3, rep1, 5U_ml
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_800U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_800U_ml.bw5y28i98k.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4072.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_800U_ml.bwd6u774gp.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_800U_ml.bwd6u774gp.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4072.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_10U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_10U_ml.bw_mn9eujv.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4065.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_400U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_400U_ml.bwnsnh6gep.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4071.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_50U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_50U_ml.bw9x8wwvqk.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4067.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_10U_ml.bw9rdbadxr.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_10U_ml.bw9rdbadxr.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4065.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_200U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_200U_ml.bwj22gf1yp.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4070.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_200U_ml.bw85crk4ok.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_200U_ml.bw85crk4ok.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4070.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_50U_ml.bwl_abs49p.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_50U_ml.bwl_abs49p.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4067.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_2.5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_2.5U_ml.bwfaa2goq1.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4064.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_100U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_100U_ml.bwscytssx0.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4068.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_2.5U_ml.bwhh7r61pu.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_2.5U_ml.bwhh7r61pu.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4064.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_100U_ml.bweczxfi2h.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_100U_ml.bweczxfi2h.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4068.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_25U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_25U_ml.bw_xvliu6n.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4066.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_25U_ml.bwt8ecu3gl.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_25U_ml.bwt8ecu3gl.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4066.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_400U_ml.bwd5qa673w.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_400U_ml.bwd5qa673w.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4071.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
bedGraph error line 8447341 of dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_200U_ml.bw85crk4ok.tmp.wig: chromosome chrX has size 17718866 but item ends at 17718870
bedGraph error line 9108308 of dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_400U_ml.bwd5qa673w.tmp.wig: chromosome chrX has size 17718866 but item ends at 17718870
bedGraph error line 9574714 of dnase_mnase819_geo/tracks/dnase_wt_l3_rep1_100U_ml.bweczxfi2h.tmp.wig: chromosome chrX has size 17718866 but item ends at 17718870






    




[Parallel(n_jobs=10)]: Done   9 out of   9 | elapsed:   47.8s finished






    




]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_25U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_25U_ml.bw7aab4ldk.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130919_4282.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_25U_ml.bwn7a1k1p9.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_25U_ml.bwn7a1k1p9.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130919_4282.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_800U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_800U_ml.bw90znr4z7.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130919_4287.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_800U_ml.bw7utu92wc.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_800U_ml.bw7utu92wc.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130919_4287.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_50U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_50U_ml.bwvhzm6ckd.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130919_4283.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_200U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_200U_ml.bw8hj53ow7.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130919_4285.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_50U_ml.bw6w0dlzbt.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_50U_ml.bw6w0dlzbt.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130919_4283.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_100U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_100U_ml.bwa9jtxr7v.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130919_4284.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_100U_ml.bwgobi1c4t.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_100U_ml.bwgobi1c4t.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130919_4284.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_200U_ml.bwmvr1s1ww.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_200U_ml.bwmvr1s1ww.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130919_4285.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_2.5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_2.5U_ml.bwkdmk54_h.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130919_4279.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_5U_ml.bw7trhcbjz.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130919_4280.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_400U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_400U_ml.bw3eygmhjc.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130919_4286.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_5U_ml.bweaq8f2ub.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_5U_ml.bweaq8f2ub.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130919_4280.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_10U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_10U_ml.bw00fmesw5.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130919_4281.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_10U_ml.bw3svbuurn.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_10U_ml.bw3svbuurn.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130919_4281.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_400U_ml.bw8git7i6k.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_400U_ml.bw8git7i6k.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130919_4286.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_2.5U_ml.bwnwgvwfa8.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l3_rep2_2.5U_ml.bwnwgvwfa8.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130919_4279.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw






    




[Parallel(n_jobs=10)]: Done   9 out of   9 | elapsed:   45.7s finished






    




]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_200U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_200U_ml.bwtiq1kvh0.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6324.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_25U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_25U_ml.bw9yiahsoi.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6321.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_5U_ml.bwja02lxmr.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6319.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_400U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_400U_ml.bw6ww75qk5.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6325.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_25U_ml.bwj88noirv.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_25U_ml.bwj88noirv.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6321.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_50U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_50U_ml.bwgvxv3l26.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6322.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_50U_ml.bwg67hzdi0.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_50U_ml.bwg67hzdi0.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6322.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_100U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_100U_ml.bwmjaeqxnq.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6323.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_400U_ml.bwfvbsricz.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_400U_ml.bwfvbsricz.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6325.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_200U_ml.bw992hp2cg.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_200U_ml.bw992hp2cg.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6324.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_100U_ml.bwbx48zno5.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_100U_ml.bwbx48zno5.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6323.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_800U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_800U_ml.bw0up5u69h.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6326.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_2.5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_2.5U_ml.bwldgdd_5v.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6318.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_5U_ml.bw_j2eirx5.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_5U_ml.bw_j2eirx5.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6319.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_10U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_10U_ml.bwcknrrtkd.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6320.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_800U_ml.bwl11uo9pm.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_800U_ml.bwl11uo9pm.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6326.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_2.5U_ml.bw4w9z30z5.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_2.5U_ml.bw4w9z30z5.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6318.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_10U_ml.bwpbu1k3pr.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l4_rep1_10U_ml.bwpbu1k3pr.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6320.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw






    




[Parallel(n_jobs=10)]: Done   9 out of   9 | elapsed:   37.9s finished






    




]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_800U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_800U_ml.bwsgr495l6.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6336.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_400U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_400U_ml.bww15dmefq.tmp.chroms
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_50U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_50U_ml.bw38dm8bw9.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6333.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_800U_ml.bwxvn1uh34.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_800U_ml.bwxvn1uh34.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6336.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6335.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_10U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_10U_ml.bww96b1e6b.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6331.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_200U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_200U_ml.bw2dtiy1gy.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6334.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_10U_ml.bw4z7kskex.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_10U_ml.bw4z7kskex.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6331.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_200U_ml.bw3vcse3d0.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_200U_ml.bw3vcse3d0.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6334.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_400U_ml.bwutjrkfae.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_400U_ml.bwutjrkfae.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6335.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_50U_ml.bwj8qw08kv.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_50U_ml.bwj8qw08kv.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6333.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_2.5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_2.5U_ml.bwgcyj7hps.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6329.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_100U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_100U_ml.bws4pirdcl.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6337.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_5U_ml.bwesu48d70.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6330.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_25U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_25U_ml.bwgyr5nz4e.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6332.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_2.5U_ml.bwfqvfnz8h.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_2.5U_ml.bwfqvfnz8h.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6329.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_5U_ml.bwkbvdnzz3.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_5U_ml.bwkbvdnzz3.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6330.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_25U_ml.bwzhr8221f.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_25U_ml.bwzhr8221f.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6332.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_100U_ml.bwu961o2br.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_l4_rep2_100U_ml.bwu961o2br.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150203_6337.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw






    




[Parallel(n_jobs=10)]: Done   9 out of   9 | elapsed:   40.3s finished






    




skip: dnase_wt_ya, rep1, 5U_ml
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_10U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_10U_ml.bwx4ryz6k7.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140401_4971.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_800U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_800U_ml.bwmuvu6hje.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140401_4977.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_2.5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_2.5U_ml.bwnicryw3f.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140401_4970.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_200U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_200U_ml.bw7js7wgx0.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140401_4975.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_50U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_50U_ml.bwma_43rnc.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140401_4973.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_100U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_100U_ml.bw05wnyyd4.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140401_lane8.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_50U_ml.bw657696rr.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_50U_ml.bw657696rr.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140401_4973.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_2.5U_ml.bwc36rst_h.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_2.5U_ml.bwc36rst_h.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140401_4970.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_200U_ml.bw9ews0xtv.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_200U_ml.bw9ews0xtv.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140401_4975.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_10U_ml.bwuzvcxm3k.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_10U_ml.bwuzvcxm3k.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140401_4971.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_400U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_400U_ml.bwe3l7i_1r.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140401_4976.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_400U_ml.bw6igladd7.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_400U_ml.bw6igladd7.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140401_4976.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_800U_ml.bwg7onbmt6.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_800U_ml.bwg7onbmt6.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140401_4977.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_100U_ml.bwgmrz0mmo.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_100U_ml.bwgmrz0mmo.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140401_lane8.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_25U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_25U_ml.bw_2h_0tek.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140401_4972.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_25U_ml.bwwpj315zh.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_25U_ml.bwwpj315zh.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg140401_4972.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
bedGraph error line 8992774 of dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_10U_ml.bwuzvcxm3k.tmp.wig: chromosome chrX has size 17718866 but item ends at 17718870
bedGraph error line 9666441 of dnase_mnase819_geo/tracks/dnase_wt_ya_rep1_100U_ml.bwgmrz0mmo.tmp.wig: chromosome chrX has size 17718866 but item ends at 17718870






    




[Parallel(n_jobs=10)]: Done   9 out of   9 | elapsed:   52.0s finished






    




]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_2.5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_2.5U_ml.bw2m7c3j8y.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7023.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_100U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_100U_ml.bwfrepl7qi.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7028.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_5U_ml.bw7chy7y1z.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7024.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_400U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_400U_ml.bw76ln69xr.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7030.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_200U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_200U_ml.bw97dt2vxl.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7029.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_800U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_800U_ml.bwmvx0cfss.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7031.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_400U_ml.bwannyvmij.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_400U_ml.bwannyvmij.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7030.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_10U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_10U_ml.bwf4iora39.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7025.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_25U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_25U_ml.bwk52wvbza.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7026.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_5U_ml.bwb86r15qu.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_5U_ml.bwb86r15qu.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7024.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_200U_ml.bw274hnw7w.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_200U_ml.bw274hnw7w.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7029.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_100U_ml.bw1s3bc9ny.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_100U_ml.bw1s3bc9ny.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7028.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_800U_ml.bwsui269d7.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_800U_ml.bwsui269d7.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7031.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_10U_ml.bw9jem0n4y.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_10U_ml.bw9jem0n4y.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7025.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_2.5U_ml.bwt7gn0dge.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_2.5U_ml.bwt7gn0dge.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7023.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_50U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_50U_ml.bw89qp7kwm.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7027.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_25U_ml.bw92qvzusv.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_25U_ml.bw92qvzusv.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7026.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_50U_ml.bwf29duhnp.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/dnase_wt_ya_rep2_50U_ml.bwf29duhnp.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg150603_7027.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw






    




[Parallel(n_jobs=10)]: Done   9 out of   9 | elapsed:   40.4s finished






    




skip: mnase_wt_emb, rep1, 0.05U_ml
skip: mnase_wt_emb, rep1, 0.025U_ml
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_16U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_16U_ml.bwlq9m014i.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4061.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_4U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_4U_ml.bwu6y6iwl_.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4058.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_0.25U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_0.25U_ml.bwspw9gra1.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4055.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_8U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_8U_ml.bwi60_ub1j.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4059.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_0.1U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_0.1U_ml.bwofciyd1t.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4054.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_8U_ml.bw0dqgzaff.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_8U_ml.bw0dqgzaff.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4059.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_16U_ml.bwo5t7x4v4.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_16U_ml.bwo5t7x4v4.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4061.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_0.25U_ml.bw1wdg_xr5.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_0.25U_ml.bw1wdg_xr5.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4055.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_0.1U_ml.bw8sa2ctbs.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_0.1U_ml.bw8sa2ctbs.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4054.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_4U_ml.bw7m4l7drj.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_4U_ml.bw7m4l7drj.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4058.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_0.5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_0.5U_ml.bww4ack5j2.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4056.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_1U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_1U_ml.bwy1x6jaqi.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4057.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_0.5U_ml.bwphkl0pr_.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_0.5U_ml.bwphkl0pr_.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4056.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_1U_ml.bw2w2gsvk1.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/mnase_wt_emb_rep1_1U_ml.bw2w2gsvk1.tmp.wig scale 0.1 bin 10 mean dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg130809_4057.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw






    




[Parallel(n_jobs=10)]: Done   9 out of   9 | elapsed:   50.0s finished






    




]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_0.025U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_0.025U_ml.bw1vu9dtf9.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg141028_5513.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_0.05U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_0.05U_ml.bw0l0erh8l.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg141028_5514.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_0.025U_ml.bwyq8v6s40.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_0.025U_ml.bwyq8v6s40.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg141028_5513.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_1U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_1U_ml.bw4y1axxhs.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg141028_5518.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_16U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_16U_ml.bwlmw22aq2.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg141028_5521.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_0.1U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_0.1U_ml.bw_b8axbyy.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg141028_5515.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw

fp_tmp_wtools=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_0.05U_ml.bwa6q7tnaj.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_0.05U_ml.bwa6q7tnaj.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg141028_5514.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_4U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_4U_ml.bwg2dabhgg.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg141028_5519.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_0.5U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_0.5U_ml.bwf0_qd0hz.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg141028_5517.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_16U_ml.bw5drk58q1.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_16U_ml.bw5drk58q1.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg141028_5521.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_0.25U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_0.25U_ml.bw9xafyn4k.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg141028_5516.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_0.1U_ml.bwtnccyvt1.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_0.1U_ml.bwtnccyvt1.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg141028_5515.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_4U_ml.bwg5cv_w5s.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_4U_ml.bwg5cv_w5s.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg141028_5519.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_1U_ml.bwytudpvq2.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_1U_ml.bwytudpvq2.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg141028_5518.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_0.25U_ml.bwj3svhv_h.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_0.25U_ml.bwj3svhv_h.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg141028_5516.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_0.5U_ml.bwj2fcdb08.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_0.5U_ml.bwj2fcdb08.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg141028_5517.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
]0;IPython: lab/relmappingwt_cmd=write
fp_out=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_8U_ml.bw
fp_tmp_chroms=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_8U_ml.bwb5vctp_0.tmp.chroms
fp_chroms_template=dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg141028_5520.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw
chrI	15072423
chrII	15279345
chrIII	13783700
chrIV	17493793
chrV	20924149
chrX	17718866

fp_tmp_wtools=dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_8U_ml.bwtsuzr5_p.tmp.wig
wiggletools: wiggletools write dnase_mnase819_geo/tracks/mnase_wt_emb_rep2_8U_ml.bwtsuzr5_p.tmp.wig scale 0.1 bin 10 dnase_mnase/tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300/mpg141028_5520.tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300_treat_pileup.bw






    




[Parallel(n_jobs=10)]: Done   9 out of   9 | elapsed:   43.2s finished






    
Out[21]:







  

    

      

      
file_name
      
file_type
      
md5
      
description
    
  
  

    

      
0
      
dnase_wt_emb_rep1_2.5U_ml.bw
      
bigWig
      
43816436c5890074b6ce29c0507e8649
      
Normalized Embryo DNase-seq at 2.5U_ml (replic...
    
    

      
1
      
dnase_wt_emb_rep1_5U_ml.bw
      
bigWig
      
757456b191fd9a9d78fb5cb2ad54fdae
      
Normalized Embryo DNase-seq at 5U_ml (replicat...
    
    

      
2
      
dnase_wt_emb_rep1_10U_ml.bw
      
bigWig
      
6e74bec737144bc4825fb9bbbdfa6bf3
      
Normalized Embryo DNase-seq at 10U_ml (replica...
    
    

      
3
      
dnase_wt_emb_rep1_25U_ml.bw
      
bigWig
      
5c257e3f0b69b04e4e00a73e33182a50
      
Normalized Embryo DNase-seq at 25U_ml (replica...
    
    

      
4
      
dnase_wt_emb_rep1_50U_ml.bw
      
bigWig
      
076fe97e48107b95508ea114afdd50e1
      
Normalized Embryo DNase-seq at 50U_ml (replica...
    
    

      
5
      
dnase_wt_emb_rep1_100U_ml.bw
      
bigWig
      
a454d93c118b447c5b51020071105efa
      
Normalized Embryo DNase-seq at 100U_ml (replic...
    
    

      
6
      
dnase_wt_emb_rep1_200U_ml.bw
      
bigWig
      
bcd809d2f3caed1f097b0c8a8811429a
      
Normalized Embryo DNase-seq at 200U_ml (replic...
    
    

      
7
      
dnase_wt_emb_rep1_400U_ml.bw
      
bigWig
      
38178f305968605a10021103d1049c47
      
Normalized Embryo DNase-seq at 400U_ml (replic...
    
    

      
8
      
dnase_wt_emb_rep1_800U_ml.bw
      
bigWig
      
9ef4ae078d898f27b5aa84e606a680ea
      
Normalized Embryo DNase-seq at 800U_ml (replic...
    
    

      
9
      
dnase_wt_emb_rep2_2.5U_ml.bw
      
bigWig
      
58c616498dbe9cc85ac75baa950f1a14
      
Normalized Embryo DNase-seq at 2.5U_ml (replic...
    
    

      
10
      
dnase_wt_emb_rep2_5U_ml.bw
      
bigWig
      
b933b04ebef68b74ac4023c7c8066ed5
      
Normalized Embryo DNase-seq at 5U_ml (replicat...
    
    

      
11
      
dnase_wt_emb_rep2_10U_ml.bw
      
bigWig
      
4a04cc506871bd4e4ccaa9430d15e37c
      
Normalized Embryo DNase-seq at 10U_ml (replica...
    
    

      
12
      
dnase_wt_emb_rep2_25U_ml.bw
      
bigWig
      
61f709c6eb2ef7ecdd779366d2d63250
      
Normalized Embryo DNase-seq at 25U_ml (replica...
    
    

      
13
      
dnase_wt_emb_rep2_50U_ml.bw
      
bigWig
      
a100a3ec0d44e5be68a3f220621936a3
      
Normalized Embryo DNase-seq at 50U_ml (replica...
    
    

      
14
      
dnase_wt_emb_rep2_100U_ml.bw
      
bigWig
      
d956c827d1d0303185e42a3198af1697
      
Normalized Embryo DNase-seq at 100U_ml (replic...
    
    

      
15
      
dnase_wt_emb_rep2_200U_ml.bw
      
bigWig
      
031b49def4b3e764f1fd2fa918d0ec08
      
Normalized Embryo DNase-seq at 200U_ml (replic...
    
    

      
16
      
dnase_wt_emb_rep2_400U_ml.bw
      
bigWig
      
fc674c430b628fb37320e492845d00e3
      
Normalized Embryo DNase-seq at 400U_ml (replic...
    
    

      
17
      
dnase_wt_emb_rep2_800U_ml.bw
      
bigWig
      
65d797044dd017e13a80523021f544c0
      
Normalized Embryo DNase-seq at 800U_ml (replic...
    
    

      
18
      
dnase_wt_l1_rep1_2.5U_ml.bw
      
bigWig
      
51cd1137b00cb60fab2f3424a96d7d88
      
Normalized L1 DNase-seq at 2.5U_ml (replicate 1)
    
    

      
19
      
dnase_wt_l1_rep1_5U_ml.bw
      
bigWig
      
c1719b3f5585bee6e986cf628fc63b43
      
Normalized L1 DNase-seq at 5U_ml (replicate 1)
    
    

      
20
      
dnase_wt_l1_rep1_10U_ml.bw
      
bigWig
      
1393dd4ceef70e0d80f645b1f8de1df1
      
Normalized L1 DNase-seq at 10U_ml (replicate 1)
    
    

      
21
      
dnase_wt_l1_rep1_25U_ml.bw
      
bigWig
      
8a5acc34279726436b89d28fe76673a7
      
Normalized L1 DNase-seq at 25U_ml (replicate 1)
    
    

      
22
      
dnase_wt_l1_rep1_50U_ml.bw
      
bigWig
      
721960529c8e6466e95cee2491ba4e83
      
Normalized L1 DNase-seq at 50U_ml (replicate 1)
    
    

      
23
      
dnase_wt_l1_rep1_100U_ml.bw
      
bigWig
      
ccc6a76a414f6ad83e3eecffe77074d2
      
Normalized L1 DNase-seq at 100U_ml (replicate 1)
    
    

      
24
      
dnase_wt_l1_rep1_200U_ml.bw
      
bigWig
      
4e4a88604a00f55418a1b84d04d55751
      
Normalized L1 DNase-seq at 200U_ml (replicate 1)
    
    

      
25
      
dnase_wt_l1_rep1_400U_ml.bw
      
bigWig
      
e02075ca01b1d44923e9b726ea8c280f
      
Normalized L1 DNase-seq at 400U_ml (replicate 1)
    
    

      
26
      
dnase_wt_l1_rep1_800U_ml.bw
      
bigWig
      
1d6b1999d1550187663ec6e2a0994ca0
      
Normalized L1 DNase-seq at 800U_ml (replicate 1)
    
    

      
27
      
dnase_wt_l1_rep2_2.5U_ml.bw
      
bigWig
      
693129cebd87bfa4f045d4fe5b6379fa
      
Normalized L1 DNase-seq at 2.5U_ml (replicate 2)
    
    

      
28
      
dnase_wt_l1_rep2_5U_ml.bw
      
bigWig
      
626363052aee507de8940eb303ae0c44
      
Normalized L1 DNase-seq at 5U_ml (replicate 2)
    
    

      
29
      
dnase_wt_l1_rep2_10U_ml.bw
      
bigWig
      
8af836352937a4a80ae94ec17e0c93c4
      
Normalized L1 DNase-seq at 10U_ml (replicate 2)
    
    

      
...
      
...
      
...
      
...
      
...
    
    

      
94
      
dnase_wt_ya_rep1_50U_ml.bw
      
bigWig
      
4eb6c96bcdc2d86502e49a917cb02568
      
Normalized YA DNase-seq at 50U_ml (replicate 1)
    
    

      
95
      
dnase_wt_ya_rep1_100U_ml.bw
      
bigWig
      
50afdf74e6c80e60c6f2081b4822da3f
      
Normalized YA DNase-seq at 100U_ml (replicate 1)
    
    

      
96
      
dnase_wt_ya_rep1_200U_ml.bw
      
bigWig
      
c435c3f10a6add3a6136a1d1023d3bc0
      
Normalized YA DNase-seq at 200U_ml (replicate 1)
    
    

      
97
      
dnase_wt_ya_rep1_400U_ml.bw
      
bigWig
      
f6cda0366ba6592d2af37d0a933145a5
      
Normalized YA DNase-seq at 400U_ml (replicate 1)
    
    

      
98
      
dnase_wt_ya_rep1_800U_ml.bw
      
bigWig
      
472a7d1306ee2f044da8c515cdefde8f
      
Normalized YA DNase-seq at 800U_ml (replicate 1)
    
    

      
99
      
dnase_wt_ya_rep2_2.5U_ml.bw
      
bigWig
      
c32d97d52d6739b767c251e77e62d9bc
      
Normalized YA DNase-seq at 2.5U_ml (replicate 2)
    
    

      
100
      
dnase_wt_ya_rep2_5U_ml.bw
      
bigWig
      
93e442da641d745314fce8f11bc243aa
      
Normalized YA DNase-seq at 5U_ml (replicate 2)
    
    

      
101
      
dnase_wt_ya_rep2_10U_ml.bw
      
bigWig
      
198ebe1c6411fe4925c8b1d6bb5791e5
      
Normalized YA DNase-seq at 10U_ml (replicate 2)
    
    

      
102
      
dnase_wt_ya_rep2_25U_ml.bw
      
bigWig
      
33bf7377ef255e1eed67ff109924c492
      
Normalized YA DNase-seq at 25U_ml (replicate 2)
    
    

      
103
      
dnase_wt_ya_rep2_50U_ml.bw
      
bigWig
      
c5909af7daf3c89cb4128bc1c0231170
      
Normalized YA DNase-seq at 50U_ml (replicate 2)
    
    

      
104
      
dnase_wt_ya_rep2_100U_ml.bw
      
bigWig
      
e678401f7cc275f3429dbbde620f6f57
      
Normalized YA DNase-seq at 100U_ml (replicate 2)
    
    

      
105
      
dnase_wt_ya_rep2_200U_ml.bw
      
bigWig
      
5234b1dfd6c4b0115c5670f662569fed
      
Normalized YA DNase-seq at 200U_ml (replicate 2)
    
    

      
106
      
dnase_wt_ya_rep2_400U_ml.bw
      
bigWig
      
21cbd260b7179d6c3aa73296d48c1449
      
Normalized YA DNase-seq at 400U_ml (replicate 2)
    
    

      
107
      
dnase_wt_ya_rep2_800U_ml.bw
      
bigWig
      
a7204758f87f3f8c4a18130ab319acfb
      
Normalized YA DNase-seq at 800U_ml (replicate 2)
    
    

      
110
      
mnase_wt_emb_rep1_0.1U_ml.bw
      
bigWig
      
951c98d7e3857fa922ded8f1cfdc520c
      
Normalized Embryo MNase-seq at 0.1U_ml (replic...
    
    

      
111
      
mnase_wt_emb_rep1_0.25U_ml.bw
      
bigWig
      
93c711073b0593efcca79681d3278403
      
Normalized Embryo MNase-seq at 0.25U_ml (repli...
    
    

      
112
      
mnase_wt_emb_rep1_0.5U_ml.bw
      
bigWig
      
0913a0084644cedc12f05c25da73875c
      
Normalized Embryo MNase-seq at 0.5U_ml (replic...
    
    

      
113
      
mnase_wt_emb_rep1_1U_ml.bw
      
bigWig
      
b23db04f7295660a8d8851c4bc6de1a4
      
Normalized Embryo MNase-seq at 1U_ml (replicat...
    
    

      
114
      
mnase_wt_emb_rep1_4U_ml.bw
      
bigWig
      
36e397bbf34f1f038cb07a4efdc87d32
      
Normalized Embryo MNase-seq at 4U_ml (replicat...
    
    

      
115
      
mnase_wt_emb_rep1_8U_ml.bw
      
bigWig
      
8f26ed3f411763b4110e82e5e73bfa38
      
Normalized Embryo MNase-seq at 8U_ml (replicat...
    
    

      
116
      
mnase_wt_emb_rep1_16U_ml.bw
      
bigWig
      
0db44125d8a39f70cc8f046b91e9d822
      
Normalized Embryo MNase-seq at 16U_ml (replica...
    
    

      
117
      
mnase_wt_emb_rep2_0.025U_ml.bw
      
bigWig
      
23c14cc6e4c6a4dc65a099dacde2611a
      
Normalized Embryo MNase-seq at 0.025U_ml (repl...
    
    

      
118
      
mnase_wt_emb_rep2_0.05U_ml.bw
      
bigWig
      
436bf99045bcb238bd4059aa77b2b4ad
      
Normalized Embryo MNase-seq at 0.05U_ml (repli...
    
    

      
119
      
mnase_wt_emb_rep2_0.1U_ml.bw
      
bigWig
      
b06f315d2dfe545c767d4e7859a6e520
      
Normalized Embryo MNase-seq at 0.1U_ml (replic...
    
    

      
120
      
mnase_wt_emb_rep2_0.25U_ml.bw
      
bigWig
      
c9ff7aac63dcdc7302b6580f29b82d40
      
Normalized Embryo MNase-seq at 0.25U_ml (repli...
    
    

      
121
      
mnase_wt_emb_rep2_0.5U_ml.bw
      
bigWig
      
5d8797cdc7ff840e6e4f99933be3cd5f
      
Normalized Embryo MNase-seq at 0.5U_ml (replic...
    
    

      
122
      
mnase_wt_emb_rep2_1U_ml.bw
      
bigWig
      
d7983b174da83965bca47d8e5f6c85d7
      
Normalized Embryo MNase-seq at 1U_ml (replicat...
    
    

      
123
      
mnase_wt_emb_rep2_4U_ml.bw
      
bigWig
      
1604032afc5edc19fde3f9c851e39785
      
Normalized Embryo MNase-seq at 4U_ml (replicat...
    
    

      
124
      
mnase_wt_emb_rep2_8U_ml.bw
      
bigWig
      
e3c0b198a8eb466d3011d4b6ae5f2f10
      
Normalized Embryo MNase-seq at 8U_ml (replicat...
    
    

      
125
      
mnase_wt_emb_rep2_16U_ml.bw
      
bigWig
      
87b35fae0af51ad094ac3018037e812d
      
Normalized Embryo MNase-seq at 16U_ml (replica...
    
  

122 rows × 4 columns

In [5]:

    

# Table: (deprecated)
"""
def processed_(cond_conc):
    cond, conc = cond_conc
    (assay, stage) = (cond[:5], cond[6:])
    assay = {'dnase': 'DNase-seq', 'mnase': 'MNase-seq'}[assay]
    stage = {'wt_emb': 'Embryo', 'wt_l1': 'L1', 'wt_l2': 'L2', 'wt_l3': 'L3', 'wt_l4': 'L4', 'wt_ya': 'YA',}[stage]
    df_rep1 = df_merge_.query('(geoid == "%s_rep1") & (conc == "%s")' % (cond, conc))
    df_rep2 = df_merge_.query('(geoid == "%s_rep2") & (conc == "%s")' % (cond, conc))
    description = 'Normalized %s %s at %s averaged across replicates' % (stage, assay, conc)
    fp_out = 'dnase_mnase819_geo/tracks/%s_%s.bw' % (cond, conc)
    fn_out = '%s_%s.bw' % (cond, conc)
    if len(df_rep1) != 1 or len(df_rep2) != 1:
        print('skip: %s, %s' % (cond, conc))
        return (fn_out, 'bigWig', None, description)
    else:
        step_ = 'tg_pe.bwa_pe.rm_unmapped_pe.rm_chrM.rm_blacklist.rm_q10.macs2_pe_lt300'
        fp_inp1 = pf(df_rep1.iloc[0].bid, step_, '_treat_pileup.bw', 'dnase_mnase')
        fp_inp2 = pf(df_rep2.iloc[0].bid, step_, '_treat_pileup.bw', 'dnase_mnase')
        if not os.path.isfile(fp_out):
            !scripts/bigWiggleTools.ipy write {fp_out} scale 0.1 bin 10 mean {fp_inp1} {fp_inp2}
        md5_ = !md5sum {fp_out} | awk '{{print $$1}}'
        return (fn_out, 'bigWig', md5_[0], description)

df_geo2 = pd.DataFrame.from_records(
    pmap(processed_, [('dnase_wt_emb', conc) for conc in config['dnase_concentrations']], n_jobs=10) +
    pmap(processed_, [('dnase_wt_l1', conc) for conc in config['dnase_concentrations']], n_jobs=10) +
    pmap(processed_, [('dnase_wt_l2', conc) for conc in config['dnase_concentrations']], n_jobs=10) +
    pmap(processed_, [('dnase_wt_l3', conc) for conc in config['dnase_concentrations']], n_jobs=10) +
    pmap(processed_, [('dnase_wt_l4', conc) for conc in config['dnase_concentrations']], n_jobs=10) +
    pmap(processed_, [('dnase_wt_ya', conc) for conc in config['dnase_concentrations']], n_jobs=10) +
    pmap(processed_, [('mnase_wt_emb', conc) for conc in config['mnase_concentrations']], n_jobs=10)
, columns=['file_name', 'file_type', 'md5', 'description']).query('md5 == md5')
df_geo2.to_csv('dnase_mnase819_geo/dnase_mnase_geo2_processed.tsv', index=False, header=True, sep='\t')
"""


    

    




[Parallel(n_jobs=10)]: Done   9 out of   9 | elapsed:    1.8s finished
[Parallel(n_jobs=10)]: Done   9 out of   9 | elapsed:    1.6s finished
[Parallel(n_jobs=10)]: Done   9 out of   9 | elapsed:    2.3s finished






    




skip: dnase_wt_l3, 5U_ml






    




[Parallel(n_jobs=10)]: Done   9 out of   9 | elapsed:    1.6s finished
[Parallel(n_jobs=10)]: Done   9 out of   9 | elapsed:    2.0s finished






    




skip: dnase_wt_ya, 5U_ml






    




[Parallel(n_jobs=10)]: Done   9 out of   9 | elapsed:    2.8s finished






    




skip: mnase_wt_emb, 0.025U_ml
skip: mnase_wt_emb, 8U_ml
skip: mnase_wt_emb, 0.05U_ml






    




[Parallel(n_jobs=10)]: Done   9 out of   9 | elapsed:    2.0s finished

In [ ]: