In [46]:

    

#takes .pwm files downloaded from yetfasco and converts to beeml format

import glob
import os
with open("pwm_beeml.txt", "w+") as outfile:
    for fname in glob.glob('/Users/bergeric/Downloads/1.02/ALIGNED_ENOLOGO_FORMAT_PWMS/*'):
        fname2 = (os.path.splitext(os.path.basename(fname)))
        header = '# {}'.format(fname2[0])
        filename = "%s" % fname
        with open(filename) as f:
            matrix = f.read()
            s = "\n"
            joined = s.join((header, matrix))
            outfile.write(joined)


    

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