In [7]:
INPUT_IMAGE_DIMS = (112, 76, 112, 1)
OUTPUT_IMAGE_DIMS = (24, 24, 24, 1)
DATASET_NAME = '-centered-rotated'
INPUT_FOLDER = '../../../input/step5-112/'
OUTPUT_FOLDER = '../../../output/kaggle-bowl/step5/'
In [8]:
import sys
import h5py
import numpy as np
import shutil
import os
import datetime
import logging
import random
from skimage.morphology import ball, binary_closing
from skimage.measure import label, regionprops
from modules.logging import logger
import modules.logging
import modules.utils as utils
from modules.utils import Timer
import modules.logging
In [ ]:
#TODO: MOVE THIS CODE TO UTILS
def lookup_nodules_simple(lung_pixels):
id = random.randint(0,999999)
utils.show_slices(lung_pixels, "lung" + str(id), nr_slices=12, cols=4, size=7)
#TODO
utils.show_slices(lung_pixels, "nodules" + str(id), nr_slices=6, cols=3, size=5)
In [13]:
def generate_nodule_samples(input_x_ds, input_y_ds, output_x_ds, output_y_ds):
output_index = 0
for i in range(len(input_x_ds)):
ts = Timer('Looking for nodules on patient lung ' + str(i))
nodules_pixels = lookup_nodules_simple(input_x_ds[i])
nodules_label = input_y_ds[i]
for nodule_pixels in nodules_pixels:
output_x_ds[output_index] = nodule_pixels
output_y_ds[output_index] = nodules_label
output_index = output_index + 1
ts.stop()
break #REMOVE LATER
return output_index
In [ ]:
def start_processing(input_dir, input_image_dims, input_name, output_image_dims, output_dir):
logger.info('Creating node samples. input_dir='+ input_dir + ' output_dir=' + output_dir)
logger.info('Preparing output dir')
utils.mkdirs(output_dir, dirs=['images'], recreate=True)
modules.logging.setup_file_logger(output_dir + 'out.log')
t = Timer('Creating nodule samples')
len_input_x_ds = None
input_dataset_file = dataset_path(input_dir, input_name, input_image_dims)
with h5py.File(input_dataset_file, 'r') as input_h5f:
logger.info('input x shape={}'.format(input_h5f['X'].shape))
input_x_ds = input_h5f['X']
input_y_ds = input_h5f['Y']
len_input_x_ds = len(input_x_ds)
len_input_y_ds = len(input_y_ds)
output_h5f, output_x_ds, output_y_ds = utils.create_xy_datasets(output_dir, "nodules", output_image_dims, 9999):
with output_h5f:
total_nodules = generate_nodule_samples(input_x_ds, input_y_ds, output_x_ds, output_y_ds)
#FIXME: RESIZE H5 DATASET TO total_nodules
utils.validate_dataset(output_dir, "nodules", output_image_dims, save_dir=output_dir + 'images/')
t.stop()
In [ ]:
logger.info('==== PROCESSING SHARDS MERGE ====')
start_processing(INPUT_FOLDER, INPUT_IMAGE_DIMS, OUTPUT_IMAGE_DIMS, OUTPUT_FOLDER)
logger.info('==== ALL DONE ====')
2017-03-05 23:42:57,726 INFO ==== PROCESSING SHARDS MERGE ====
2017-03-05 23:42:57,727 INFO Resizing images. input_dir=../../../output/kaggle-bowl/step4/ output_dir=../../../output/kaggle-bowl/step5/
2017-03-05 23:42:57,728 INFO Preparing output dir
2017-03-05 23:42:57,730 INFO > [started] Distributing input dataset among train, validate and test datasets...
2017-03-05 23:42:57,731 INFO input x shape=(1392, 224, 152, 224, 1)
2017-03-05 23:42:57,733 INFO Calculating label 0|1 proportion
2017-03-05 23:42:57,877 INFO Y: total: 1392
2017-03-05 23:42:57,878 INFO Y: label 0: 1033.0 74.2097701149%
2017-03-05 23:42:57,880 INFO Y: label 1: 359.0 25.7902298851%
2017-03-05 23:42:57,880 INFO Calculate patient distribution among datasets
2017-03-05 23:42:57,882 INFO > [started] Distribute to train dataset...
2017-03-05 23:42:57,883 DEBUG train_qtty=538.0 qtty_label0=269.0 qtty_label1=269.0
2017-03-05 23:42:57,885 DEBUG input x shape=(538, 50, 34, 50, 1)
2017-03-05 23:42:57,886 INFO > [started] Resizing patient pixels 0...
/usr/local/lib/python3.4/dist-packages/scipy/ndimage/interpolation.py:571: RuntimeWarning: invalid value encountered in true_divide
zoom = (numpy.array(input.shape) - 1) / zoom_div
2017-03-05 23:42:58,490 INFO > [done] Resizing patient pixels 0 (603.736 ms)
2017-03-05 23:42:58,492 INFO > [started] Resizing patient pixels 1...
2017-03-05 23:43:00,077 INFO > [done] Resizing patient pixels 1 (1584.649 ms)
2017-03-05 23:43:00,079 INFO > [started] Resizing patient pixels 2...
2017-03-05 23:43:01,644 INFO > [done] Resizing patient pixels 2 (1564.898 ms)
2017-03-05 23:43:01,646 INFO > [started] Resizing patient pixels 3...
2017-03-05 23:43:03,102 INFO > [done] Resizing patient pixels 3 (1456.908 ms)
2017-03-05 23:43:03,105 INFO > [started] Resizing patient pixels 4...
2017-03-05 23:43:04,647 INFO > [done] Resizing patient pixels 4 (1541.842 ms)
2017-03-05 23:43:04,649 INFO > [started] Resizing patient pixels 5...
2017-03-05 23:43:06,277 INFO > [done] Resizing patient pixels 5 (1628.351 ms)
2017-03-05 23:43:06,279 INFO > [started] Resizing patient pixels 6...
2017-03-05 23:43:07,888 INFO > [done] Resizing patient pixels 6 (1608.128 ms)
2017-03-05 23:43:07,890 INFO > [started] Resizing patient pixels 7...
2017-03-05 23:43:09,597 INFO > [done] Resizing patient pixels 7 (1706.740 ms)
2017-03-05 23:43:09,599 INFO > [started] Resizing patient pixels 8...
2017-03-05 23:43:11,292 INFO > [done] Resizing patient pixels 8 (1692.771 ms)
2017-03-05 23:43:11,294 INFO > [started] Resizing patient pixels 9...
2017-03-05 23:43:12,846 INFO > [done] Resizing patient pixels 9 (1551.634 ms)
2017-03-05 23:43:12,848 INFO > [started] Resizing patient pixels 10...
2017-03-05 23:43:14,433 INFO > [done] Resizing patient pixels 10 (1585.081 ms)
2017-03-05 23:43:14,435 INFO > [started] Resizing patient pixels 11...
2017-03-05 23:43:15,964 INFO > [done] Resizing patient pixels 11 (1528.979 ms)
2017-03-05 23:43:15,966 INFO > [started] Resizing patient pixels 12...
2017-03-05 23:43:17,428 INFO > [done] Resizing patient pixels 12 (1461.285 ms)
2017-03-05 23:43:17,430 INFO > [started] Resizing patient pixels 13...
2017-03-05 23:43:19,061 INFO > [done] Resizing patient pixels 13 (1630.783 ms)
2017-03-05 23:43:19,063 INFO > [started] Resizing patient pixels 14...
2017-03-05 23:43:20,675 INFO > [done] Resizing patient pixels 14 (1611.599 ms)
2017-03-05 23:43:20,677 INFO > [started] Resizing patient pixels 15...
2017-03-05 23:43:22,270 INFO > [done] Resizing patient pixels 15 (1593.068 ms)
2017-03-05 23:43:22,273 INFO > [started] Resizing patient pixels 16...
2017-03-05 23:43:23,901 INFO > [done] Resizing patient pixels 16 (1628.456 ms)
2017-03-05 23:43:23,903 INFO > [started] Resizing patient pixels 17...
2017-03-05 23:43:25,453 INFO > [done] Resizing patient pixels 17 (1549.101 ms)
2017-03-05 23:43:25,455 INFO > [started] Resizing patient pixels 18...
2017-03-05 23:43:26,918 INFO > [done] Resizing patient pixels 18 (1462.681 ms)
2017-03-05 23:43:26,920 INFO > [started] Resizing patient pixels 19...
2017-03-05 23:43:28,500 INFO > [done] Resizing patient pixels 19 (1579.617 ms)
2017-03-05 23:43:28,502 INFO > [started] Resizing patient pixels 20...
2017-03-05 23:43:29,944 INFO > [done] Resizing patient pixels 20 (1441.931 ms)
2017-03-05 23:43:29,946 INFO > [started] Resizing patient pixels 21...
2017-03-05 23:43:31,413 INFO > [done] Resizing patient pixels 21 (1466.768 ms)
2017-03-05 23:43:31,415 INFO > [started] Resizing patient pixels 22...
2017-03-05 23:43:32,818 INFO > [done] Resizing patient pixels 22 (1403.336 ms)
2017-03-05 23:43:32,820 INFO > [started] Resizing patient pixels 23...
2017-03-05 23:43:34,472 INFO > [done] Resizing patient pixels 23 (1651.779 ms)
2017-03-05 23:43:34,475 INFO > [started] Resizing patient pixels 24...
2017-03-05 23:43:36,011 INFO > [done] Resizing patient pixels 24 (1536.734 ms)
2017-03-05 23:43:36,014 INFO > [started] Resizing patient pixels 25...
2017-03-05 23:43:37,520 INFO > [done] Resizing patient pixels 25 (1506.419 ms)
2017-03-05 23:43:37,522 INFO > [started] Resizing patient pixels 26...
2017-03-05 23:43:39,636 INFO > [done] Resizing patient pixels 26 (2113.642 ms)
2017-03-05 23:43:39,639 INFO > [started] Resizing patient pixels 27...
2017-03-05 23:43:41,036 INFO > [done] Resizing patient pixels 27 (1396.758 ms)
2017-03-05 23:43:41,038 INFO > [started] Resizing patient pixels 28...
2017-03-05 23:43:42,493 INFO > [done] Resizing patient pixels 28 (1454.296 ms)
2017-03-05 23:43:42,495 INFO > [started] Resizing patient pixels 29...
2017-03-05 23:43:43,945 INFO > [done] Resizing patient pixels 29 (1449.949 ms)
2017-03-05 23:43:43,947 INFO > [started] Resizing patient pixels 30...
2017-03-05 23:43:45,488 INFO > [done] Resizing patient pixels 30 (1540.833 ms)
2017-03-05 23:43:45,490 INFO > [started] Resizing patient pixels 31...
2017-03-05 23:43:47,087 INFO > [done] Resizing patient pixels 31 (1596.560 ms)
2017-03-05 23:43:47,089 INFO > [started] Resizing patient pixels 32...
2017-03-05 23:43:48,667 INFO > [done] Resizing patient pixels 32 (1577.323 ms)
2017-03-05 23:43:48,669 INFO > [started] Resizing patient pixels 33...
2017-03-05 23:43:50,250 INFO > [done] Resizing patient pixels 33 (1580.848 ms)
2017-03-05 23:43:50,252 INFO > [started] Resizing patient pixels 34...
2017-03-05 23:43:51,770 INFO > [done] Resizing patient pixels 34 (1517.720 ms)
2017-03-05 23:43:51,772 INFO > [started] Resizing patient pixels 35...
2017-03-05 23:43:53,247 INFO > [done] Resizing patient pixels 35 (1475.009 ms)
2017-03-05 23:43:53,250 INFO > [started] Resizing patient pixels 36...
2017-03-05 23:43:54,770 INFO > [done] Resizing patient pixels 36 (1520.434 ms)
2017-03-05 23:43:54,772 INFO > [started] Resizing patient pixels 37...
2017-03-05 23:43:56,183 INFO > [done] Resizing patient pixels 37 (1410.367 ms)
2017-03-05 23:43:56,185 INFO > [started] Resizing patient pixels 38...
2017-03-05 23:43:57,604 INFO > [done] Resizing patient pixels 38 (1418.987 ms)
2017-03-05 23:43:57,607 INFO > [started] Resizing patient pixels 39...
2017-03-05 23:43:59,162 INFO > [done] Resizing patient pixels 39 (1555.408 ms)
2017-03-05 23:43:59,164 INFO > [started] Resizing patient pixels 40...
2017-03-05 23:44:00,652 INFO > [done] Resizing patient pixels 40 (1487.984 ms)
2017-03-05 23:44:00,655 INFO > [started] Resizing patient pixels 41...
2017-03-05 23:44:02,101 INFO > [done] Resizing patient pixels 41 (1445.840 ms)
2017-03-05 23:44:02,103 INFO > [started] Resizing patient pixels 42...
2017-03-05 23:44:03,463 INFO > [done] Resizing patient pixels 42 (1360.645 ms)
2017-03-05 23:44:03,466 INFO > [started] Resizing patient pixels 43...
2017-03-05 23:44:04,805 INFO > [done] Resizing patient pixels 43 (1339.507 ms)
2017-03-05 23:44:04,807 INFO > [started] Resizing patient pixels 44...
2017-03-05 23:44:06,704 INFO > [done] Resizing patient pixels 44 (1896.466 ms)
2017-03-05 23:44:06,706 INFO > [started] Resizing patient pixels 45...
2017-03-05 23:44:08,047 INFO > [done] Resizing patient pixels 45 (1341.513 ms)
2017-03-05 23:44:08,049 INFO > [started] Resizing patient pixels 46...
2017-03-05 23:44:09,505 INFO > [done] Resizing patient pixels 46 (1455.669 ms)
2017-03-05 23:44:09,508 INFO > [started] Resizing patient pixels 47...
2017-03-05 23:44:10,918 INFO > [done] Resizing patient pixels 47 (1410.233 ms)
2017-03-05 23:44:10,920 INFO > [started] Resizing patient pixels 48...
2017-03-05 23:44:12,325 INFO > [done] Resizing patient pixels 48 (1404.831 ms)
2017-03-05 23:44:12,327 INFO > [started] Resizing patient pixels 49...
2017-03-05 23:44:13,718 INFO > [done] Resizing patient pixels 49 (1391.036 ms)
2017-03-05 23:44:13,720 INFO > [started] Resizing patient pixels 50...
2017-03-05 23:44:15,163 INFO > [done] Resizing patient pixels 50 (1443.455 ms)
2017-03-05 23:44:15,166 INFO > [started] Resizing patient pixels 51...
2017-03-05 23:44:16,622 INFO > [done] Resizing patient pixels 51 (1456.242 ms)
2017-03-05 23:44:16,624 INFO > [started] Resizing patient pixels 52...
2017-03-05 23:44:18,165 INFO > [done] Resizing patient pixels 52 (1540.934 ms)
2017-03-05 23:44:18,167 INFO > [started] Resizing patient pixels 53...
2017-03-05 23:44:19,562 INFO > [done] Resizing patient pixels 53 (1394.908 ms)
2017-03-05 23:44:19,565 INFO > [started] Resizing patient pixels 54...
2017-03-05 23:44:21,055 INFO > [done] Resizing patient pixels 54 (1490.010 ms)
2017-03-05 23:44:21,057 INFO > [started] Resizing patient pixels 55...
2017-03-05 23:44:22,657 INFO > [done] Resizing patient pixels 55 (1599.664 ms)
2017-03-05 23:44:22,659 INFO > [started] Resizing patient pixels 56...
2017-03-05 23:44:24,189 INFO > [done] Resizing patient pixels 56 (1529.788 ms)
2017-03-05 23:44:24,191 INFO > [started] Resizing patient pixels 57...
2017-03-05 23:44:25,704 INFO > [done] Resizing patient pixels 57 (1513.045 ms)
2017-03-05 23:44:25,706 INFO > [started] Resizing patient pixels 58...
2017-03-05 23:44:27,432 INFO > [done] Resizing patient pixels 58 (1726.171 ms)
2017-03-05 23:44:27,435 INFO > [started] Resizing patient pixels 59...
2017-03-05 23:44:29,352 INFO > [done] Resizing patient pixels 59 (1917.394 ms)
2017-03-05 23:44:29,355 INFO > [started] Resizing patient pixels 60...
2017-03-05 23:44:30,889 INFO > [done] Resizing patient pixels 60 (1534.083 ms)
2017-03-05 23:44:30,891 INFO > [started] Resizing patient pixels 61...
2017-03-05 23:44:32,418 INFO > [done] Resizing patient pixels 61 (1526.821 ms)
2017-03-05 23:44:32,420 INFO > [started] Resizing patient pixels 62...
2017-03-05 23:44:34,010 INFO > [done] Resizing patient pixels 62 (1589.842 ms)
2017-03-05 23:44:34,012 INFO > [started] Resizing patient pixels 63...
2017-03-05 23:44:35,564 INFO > [done] Resizing patient pixels 63 (1551.296 ms)
2017-03-05 23:44:35,566 INFO > [started] Resizing patient pixels 64...
2017-03-05 23:44:36,963 INFO > [done] Resizing patient pixels 64 (1397.198 ms)
2017-03-05 23:44:36,965 INFO > [started] Resizing patient pixels 65...
2017-03-05 23:44:38,613 INFO > [done] Resizing patient pixels 65 (1647.735 ms)
2017-03-05 23:44:38,615 INFO > [started] Resizing patient pixels 66...
2017-03-05 23:44:39,978 INFO > [done] Resizing patient pixels 66 (1363.038 ms)
2017-03-05 23:44:39,981 INFO > [started] Resizing patient pixels 67...
2017-03-05 23:44:41,575 INFO > [done] Resizing patient pixels 67 (1593.829 ms)
2017-03-05 23:44:41,577 INFO > [started] Resizing patient pixels 68...
2017-03-05 23:44:43,179 INFO > [done] Resizing patient pixels 68 (1601.921 ms)
2017-03-05 23:44:43,181 INFO > [started] Resizing patient pixels 69...
2017-03-05 23:44:45,109 INFO > [done] Resizing patient pixels 69 (1927.677 ms)
2017-03-05 23:44:45,111 INFO > [started] Resizing patient pixels 70...
2017-03-05 23:44:46,611 INFO > [done] Resizing patient pixels 70 (1499.247 ms)
2017-03-05 23:44:46,613 INFO > [started] Resizing patient pixels 71...
2017-03-05 23:44:48,055 INFO > [done] Resizing patient pixels 71 (1441.962 ms)
2017-03-05 23:44:48,057 INFO > [started] Resizing patient pixels 72...
2017-03-05 23:44:49,640 INFO > [done] Resizing patient pixels 72 (1582.960 ms)
2017-03-05 23:44:49,642 INFO > [started] Resizing patient pixels 73...
2017-03-05 23:44:51,149 INFO > [done] Resizing patient pixels 73 (1506.977 ms)
2017-03-05 23:44:51,152 INFO > [started] Resizing patient pixels 74...
2017-03-05 23:44:52,571 INFO > [done] Resizing patient pixels 74 (1419.437 ms)
2017-03-05 23:44:52,573 INFO > [started] Resizing patient pixels 75...
2017-03-05 23:44:54,182 INFO > [done] Resizing patient pixels 75 (1608.916 ms)
2017-03-05 23:44:54,184 INFO > [started] Resizing patient pixels 76...
2017-03-05 23:44:55,780 INFO > [done] Resizing patient pixels 76 (1595.835 ms)
2017-03-05 23:44:55,782 INFO > [started] Resizing patient pixels 77...
2017-03-05 23:44:57,342 INFO > [done] Resizing patient pixels 77 (1560.123 ms)
2017-03-05 23:44:57,345 INFO > [started] Resizing patient pixels 78...
2017-03-05 23:44:58,795 INFO > [done] Resizing patient pixels 78 (1450.401 ms)
2017-03-05 23:44:58,797 INFO > [started] Resizing patient pixels 79...
2017-03-05 23:45:00,251 INFO > [done] Resizing patient pixels 79 (1453.521 ms)
2017-03-05 23:45:00,253 INFO > [started] Resizing patient pixels 80...
2017-03-05 23:45:01,789 INFO > [done] Resizing patient pixels 80 (1536.304 ms)
2017-03-05 23:45:01,792 INFO > [started] Resizing patient pixels 81...
2017-03-05 23:45:03,345 INFO > [done] Resizing patient pixels 81 (1552.724 ms)
2017-03-05 23:45:03,347 INFO > [started] Resizing patient pixels 82...
2017-03-05 23:45:04,900 INFO > [done] Resizing patient pixels 82 (1552.545 ms)
2017-03-05 23:45:04,902 INFO > [started] Resizing patient pixels 83...
2017-03-05 23:45:06,392 INFO > [done] Resizing patient pixels 83 (1489.503 ms)
2017-03-05 23:45:06,394 INFO > [started] Resizing patient pixels 84...
2017-03-05 23:45:07,774 INFO > [done] Resizing patient pixels 84 (1379.923 ms)
2017-03-05 23:45:07,776 INFO > [started] Resizing patient pixels 85...
2017-03-05 23:45:09,273 INFO > [done] Resizing patient pixels 85 (1496.658 ms)
2017-03-05 23:45:09,275 INFO > [started] Resizing patient pixels 86...
2017-03-05 23:45:10,859 INFO > [done] Resizing patient pixels 86 (1583.139 ms)
2017-03-05 23:45:10,861 INFO > [started] Resizing patient pixels 87...
2017-03-05 23:45:12,371 INFO > [done] Resizing patient pixels 87 (1509.728 ms)
2017-03-05 23:45:12,373 INFO > [started] Resizing patient pixels 88...
2017-03-05 23:45:13,764 INFO > [done] Resizing patient pixels 88 (1391.704 ms)
2017-03-05 23:45:13,767 INFO > [started] Resizing patient pixels 89...
2017-03-05 23:45:15,256 INFO > [done] Resizing patient pixels 89 (1488.866 ms)
2017-03-05 23:45:15,258 INFO > [started] Resizing patient pixels 90...
2017-03-05 23:45:16,708 INFO > [done] Resizing patient pixels 90 (1449.196 ms)
2017-03-05 23:45:16,710 INFO > [started] Resizing patient pixels 91...
2017-03-05 23:45:18,241 INFO > [done] Resizing patient pixels 91 (1531.529 ms)
2017-03-05 23:45:18,243 INFO > [started] Resizing patient pixels 92...
2017-03-05 23:45:19,719 INFO > [done] Resizing patient pixels 92 (1475.648 ms)
2017-03-05 23:45:19,722 INFO > [started] Resizing patient pixels 93...
2017-03-05 23:45:21,281 INFO > [done] Resizing patient pixels 93 (1559.406 ms)
2017-03-05 23:45:21,283 INFO > [started] Resizing patient pixels 94...
2017-03-05 23:45:22,697 INFO > [done] Resizing patient pixels 94 (1413.111 ms)
2017-03-05 23:45:22,699 INFO > [started] Resizing patient pixels 95...
2017-03-05 23:45:24,179 INFO > [done] Resizing patient pixels 95 (1480.099 ms)
2017-03-05 23:45:24,181 INFO > [started] Resizing patient pixels 96...
2017-03-05 23:45:25,639 INFO > [done] Resizing patient pixels 96 (1457.503 ms)
2017-03-05 23:45:25,641 INFO > [started] Resizing patient pixels 97...
2017-03-05 23:45:27,151 INFO > [done] Resizing patient pixels 97 (1509.897 ms)
2017-03-05 23:45:27,153 INFO > [started] Resizing patient pixels 98...
2017-03-05 23:45:28,982 INFO > [done] Resizing patient pixels 98 (1828.728 ms)
2017-03-05 23:45:28,984 INFO > [started] Resizing patient pixels 99...
2017-03-05 23:45:30,541 INFO > [done] Resizing patient pixels 99 (1556.190 ms)
2017-03-05 23:45:30,543 INFO > [started] Resizing patient pixels 100...
2017-03-05 23:45:32,057 INFO > [done] Resizing patient pixels 100 (1514.162 ms)
2017-03-05 23:45:32,059 INFO > [started] Resizing patient pixels 101...
2017-03-05 23:45:33,602 INFO > [done] Resizing patient pixels 101 (1542.766 ms)
2017-03-05 23:45:33,605 INFO > [started] Resizing patient pixels 102...
2017-03-05 23:45:35,169 INFO > [done] Resizing patient pixels 102 (1564.511 ms)
2017-03-05 23:45:35,171 INFO > [started] Resizing patient pixels 103...
2017-03-05 23:45:36,663 INFO > [done] Resizing patient pixels 103 (1491.354 ms)
2017-03-05 23:45:36,665 INFO > [started] Resizing patient pixels 104...
2017-03-05 23:45:38,234 INFO > [done] Resizing patient pixels 104 (1568.226 ms)
2017-03-05 23:45:38,236 INFO > [started] Resizing patient pixels 105...
2017-03-05 23:45:39,973 INFO > [done] Resizing patient pixels 105 (1737.256 ms)
2017-03-05 23:45:39,975 INFO > [started] Resizing patient pixels 106...
2017-03-05 23:45:41,736 INFO > [done] Resizing patient pixels 106 (1761.023 ms)
2017-03-05 23:45:41,738 INFO > [started] Resizing patient pixels 107...
2017-03-05 23:45:43,360 INFO > [done] Resizing patient pixels 107 (1621.598 ms)
2017-03-05 23:45:43,362 INFO > [started] Resizing patient pixels 108...
2017-03-05 23:45:44,905 INFO > [done] Resizing patient pixels 108 (1542.460 ms)
2017-03-05 23:45:44,907 INFO > [started] Resizing patient pixels 109...
2017-03-05 23:45:46,356 INFO > [done] Resizing patient pixels 109 (1448.841 ms)
2017-03-05 23:45:46,358 INFO > [started] Resizing patient pixels 110...
2017-03-05 23:45:47,886 INFO > [done] Resizing patient pixels 110 (1527.330 ms)
2017-03-05 23:45:47,888 INFO > [started] Resizing patient pixels 111...
2017-03-05 23:45:49,392 INFO > [done] Resizing patient pixels 111 (1503.613 ms)
2017-03-05 23:45:49,394 INFO > [started] Resizing patient pixels 112...
2017-03-05 23:45:50,976 INFO > [done] Resizing patient pixels 112 (1581.807 ms)
2017-03-05 23:45:50,978 INFO > [started] Resizing patient pixels 113...
2017-03-05 23:45:52,488 INFO > [done] Resizing patient pixels 113 (1509.823 ms)
2017-03-05 23:45:52,490 INFO > [started] Resizing patient pixels 114...
2017-03-05 23:45:54,061 INFO > [done] Resizing patient pixels 114 (1570.482 ms)
2017-03-05 23:45:54,063 INFO > [started] Resizing patient pixels 115...
2017-03-05 23:45:55,706 INFO > [done] Resizing patient pixels 115 (1643.250 ms)
2017-03-05 23:45:55,708 INFO > [started] Resizing patient pixels 116...
2017-03-05 23:45:57,411 INFO > [done] Resizing patient pixels 116 (1702.972 ms)
2017-03-05 23:45:57,414 INFO > [started] Resizing patient pixels 117...
2017-03-05 23:45:59,024 INFO > [done] Resizing patient pixels 117 (1609.636 ms)
2017-03-05 23:45:59,026 INFO > [started] Resizing patient pixels 118...
2017-03-05 23:46:00,513 INFO > [done] Resizing patient pixels 118 (1486.856 ms)
2017-03-05 23:46:00,515 INFO > [started] Resizing patient pixels 119...
2017-03-05 23:46:02,001 INFO > [done] Resizing patient pixels 119 (1485.768 ms)
2017-03-05 23:46:02,003 INFO > [started] Resizing patient pixels 120...
2017-03-05 23:46:03,387 INFO > [done] Resizing patient pixels 120 (1383.449 ms)
2017-03-05 23:46:03,389 INFO > [started] Resizing patient pixels 121...
2017-03-05 23:46:04,840 INFO > [done] Resizing patient pixels 121 (1451.500 ms)
2017-03-05 23:46:04,843 INFO > [started] Resizing patient pixels 122...
2017-03-05 23:46:06,478 INFO > [done] Resizing patient pixels 122 (1634.999 ms)
2017-03-05 23:46:06,480 INFO > [started] Resizing patient pixels 123...
2017-03-05 23:46:07,878 INFO > [done] Resizing patient pixels 123 (1398.587 ms)
2017-03-05 23:46:07,881 INFO > [started] Resizing patient pixels 124...
2017-03-05 23:46:09,454 INFO > [done] Resizing patient pixels 124 (1572.989 ms)
2017-03-05 23:46:09,456 INFO > [started] Resizing patient pixels 125...
2017-03-05 23:46:10,840 INFO > [done] Resizing patient pixels 125 (1383.822 ms)
2017-03-05 23:46:10,842 INFO > [started] Resizing patient pixels 126...
2017-03-05 23:46:12,339 INFO > [done] Resizing patient pixels 126 (1497.062 ms)
2017-03-05 23:46:12,341 INFO > [started] Resizing patient pixels 127...
2017-03-05 23:46:13,761 INFO > [done] Resizing patient pixels 127 (1419.332 ms)
2017-03-05 23:46:13,763 INFO > [started] Resizing patient pixels 128...
2017-03-05 23:46:15,219 INFO > [done] Resizing patient pixels 128 (1456.630 ms)
2017-03-05 23:46:15,222 INFO > [started] Resizing patient pixels 129...
2017-03-05 23:46:16,839 INFO > [done] Resizing patient pixels 129 (1617.190 ms)
2017-03-05 23:46:16,841 INFO > [started] Resizing patient pixels 130...
2017-03-05 23:46:18,339 INFO > [done] Resizing patient pixels 130 (1498.364 ms)
2017-03-05 23:46:18,342 INFO > [started] Resizing patient pixels 131...
2017-03-05 23:46:19,856 INFO > [done] Resizing patient pixels 131 (1514.755 ms)
2017-03-05 23:46:19,858 INFO > [started] Resizing patient pixels 132...
2017-03-05 23:46:21,429 INFO > [done] Resizing patient pixels 132 (1570.310 ms)
2017-03-05 23:46:21,431 INFO > [started] Resizing patient pixels 133...
2017-03-05 23:46:22,864 INFO > [done] Resizing patient pixels 133 (1433.081 ms)
2017-03-05 23:46:22,867 INFO > [started] Resizing patient pixels 134...
2017-03-05 23:46:24,329 INFO > [done] Resizing patient pixels 134 (1462.247 ms)
2017-03-05 23:46:24,331 INFO > [started] Resizing patient pixels 135...
2017-03-05 23:46:25,821 INFO > [done] Resizing patient pixels 135 (1489.619 ms)
2017-03-05 23:46:25,823 INFO > [started] Resizing patient pixels 136...
2017-03-05 23:46:27,380 INFO > [done] Resizing patient pixels 136 (1557.269 ms)
2017-03-05 23:46:27,382 INFO > [started] Resizing patient pixels 137...
2017-03-05 23:46:28,876 INFO > [done] Resizing patient pixels 137 (1493.927 ms)
2017-03-05 23:46:28,879 INFO > [started] Resizing patient pixels 138...
2017-03-05 23:46:30,410 INFO > [done] Resizing patient pixels 138 (1531.802 ms)
2017-03-05 23:46:30,413 INFO > [started] Resizing patient pixels 139...
2017-03-05 23:46:31,994 INFO > [done] Resizing patient pixels 139 (1580.770 ms)
2017-03-05 23:46:31,996 INFO > [started] Resizing patient pixels 140...
2017-03-05 23:46:33,501 INFO > [done] Resizing patient pixels 140 (1505.299 ms)
2017-03-05 23:46:33,503 INFO > [started] Resizing patient pixels 141...
2017-03-05 23:46:35,072 INFO > [done] Resizing patient pixels 141 (1568.898 ms)
2017-03-05 23:46:35,074 INFO > [started] Resizing patient pixels 142...
2017-03-05 23:46:36,669 INFO > [done] Resizing patient pixels 142 (1594.901 ms)
2017-03-05 23:46:36,671 INFO > [started] Resizing patient pixels 143...
2017-03-05 23:46:38,120 INFO > [done] Resizing patient pixels 143 (1448.277 ms)
2017-03-05 23:46:38,122 INFO > [started] Resizing patient pixels 144...
2017-03-05 23:46:39,517 INFO > [done] Resizing patient pixels 144 (1394.952 ms)
2017-03-05 23:46:39,519 INFO > [started] Resizing patient pixels 145...
2017-03-05 23:46:41,390 INFO > [done] Resizing patient pixels 145 (1871.391 ms)
2017-03-05 23:46:41,393 INFO > [started] Resizing patient pixels 146...
2017-03-05 23:46:43,003 INFO > [done] Resizing patient pixels 146 (1610.800 ms)
2017-03-05 23:46:43,006 INFO > [started] Resizing patient pixels 147...
2017-03-05 23:46:44,526 INFO > [done] Resizing patient pixels 147 (1520.289 ms)
2017-03-05 23:46:44,529 INFO > [started] Resizing patient pixels 148...
2017-03-05 23:46:46,219 INFO > [done] Resizing patient pixels 148 (1690.257 ms)
2017-03-05 23:46:46,221 INFO > [started] Resizing patient pixels 149...
2017-03-05 23:46:47,874 INFO > [done] Resizing patient pixels 149 (1652.192 ms)
2017-03-05 23:46:47,876 INFO > [started] Resizing patient pixels 150...
2017-03-05 23:46:49,269 INFO > [done] Resizing patient pixels 150 (1393.592 ms)
2017-03-05 23:46:49,272 INFO > [started] Resizing patient pixels 151...
2017-03-05 23:46:50,843 INFO > [done] Resizing patient pixels 151 (1571.011 ms)
2017-03-05 23:46:50,845 INFO > [started] Resizing patient pixels 152...
2017-03-05 23:46:52,388 INFO > [done] Resizing patient pixels 152 (1542.636 ms)
2017-03-05 23:46:52,390 INFO > [started] Resizing patient pixels 153...
2017-03-05 23:46:54,183 INFO > [done] Resizing patient pixels 153 (1793.085 ms)
2017-03-05 23:46:54,185 INFO > [started] Resizing patient pixels 154...
2017-03-05 23:46:56,053 INFO > [done] Resizing patient pixels 154 (1867.875 ms)
2017-03-05 23:46:56,055 INFO > [started] Resizing patient pixels 155...
2017-03-05 23:46:57,678 INFO > [done] Resizing patient pixels 155 (1622.435 ms)
2017-03-05 23:46:57,680 INFO > [started] Resizing patient pixels 156...
2017-03-05 23:46:59,291 INFO > [done] Resizing patient pixels 156 (1611.216 ms)
2017-03-05 23:46:59,294 INFO > [started] Resizing patient pixels 157...
2017-03-05 23:47:00,801 INFO > [done] Resizing patient pixels 157 (1506.768 ms)
2017-03-05 23:47:00,803 INFO > [started] Resizing patient pixels 158...
2017-03-05 23:47:02,314 INFO > [done] Resizing patient pixels 158 (1511.118 ms)
2017-03-05 23:47:02,316 INFO > [started] Resizing patient pixels 159...
2017-03-05 23:47:03,870 INFO > [done] Resizing patient pixels 159 (1553.736 ms)
2017-03-05 23:47:03,872 INFO > [started] Resizing patient pixels 160...
2017-03-05 23:47:05,587 INFO > [done] Resizing patient pixels 160 (1714.461 ms)
2017-03-05 23:47:05,589 INFO > [started] Resizing patient pixels 161...
2017-03-05 23:47:07,316 INFO > [done] Resizing patient pixels 161 (1726.991 ms)
2017-03-05 23:47:07,318 INFO > [started] Resizing patient pixels 162...
2017-03-05 23:47:08,981 INFO > [done] Resizing patient pixels 162 (1662.693 ms)
2017-03-05 23:47:08,983 INFO > [started] Resizing patient pixels 163...
2017-03-05 23:47:10,666 INFO > [done] Resizing patient pixels 163 (1682.471 ms)
2017-03-05 23:47:10,668 INFO > [started] Resizing patient pixels 164...
2017-03-05 23:47:12,258 INFO > [done] Resizing patient pixels 164 (1589.993 ms)
2017-03-05 23:47:12,261 INFO > [started] Resizing patient pixels 165...
2017-03-05 23:47:13,889 INFO > [done] Resizing patient pixels 165 (1628.095 ms)
2017-03-05 23:47:13,891 INFO > [started] Resizing patient pixels 166...
2017-03-05 23:47:15,384 INFO > [done] Resizing patient pixels 166 (1493.309 ms)
2017-03-05 23:47:15,386 INFO > [started] Resizing patient pixels 167...
2017-03-05 23:47:16,940 INFO > [done] Resizing patient pixels 167 (1553.674 ms)
2017-03-05 23:47:16,942 INFO > [started] Resizing patient pixels 168...
2017-03-05 23:47:18,702 INFO > [done] Resizing patient pixels 168 (1759.840 ms)
2017-03-05 23:47:18,704 INFO > [started] Resizing patient pixels 169...
2017-03-05 23:47:20,328 INFO > [done] Resizing patient pixels 169 (1623.188 ms)
2017-03-05 23:47:20,330 INFO > [started] Resizing patient pixels 170...
2017-03-05 23:47:21,795 INFO > [done] Resizing patient pixels 170 (1465.070 ms)
2017-03-05 23:47:21,797 INFO > [started] Resizing patient pixels 171...
2017-03-05 23:47:23,428 INFO > [done] Resizing patient pixels 171 (1630.477 ms)
2017-03-05 23:47:23,430 INFO > [started] Resizing patient pixels 172...
2017-03-05 23:47:25,015 INFO > [done] Resizing patient pixels 172 (1584.424 ms)
2017-03-05 23:47:25,017 INFO > [started] Resizing patient pixels 173...
2017-03-05 23:47:26,700 INFO > [done] Resizing patient pixels 173 (1683.072 ms)
2017-03-05 23:47:26,703 INFO > [started] Resizing patient pixels 174...
2017-03-05 23:47:28,305 INFO > [done] Resizing patient pixels 174 (1602.806 ms)
2017-03-05 23:47:28,308 INFO > [started] Resizing patient pixels 175...
2017-03-05 23:47:29,855 INFO > [done] Resizing patient pixels 175 (1547.724 ms)
2017-03-05 23:47:29,858 INFO > [started] Resizing patient pixels 176...
2017-03-05 23:47:31,240 INFO > [done] Resizing patient pixels 176 (1382.471 ms)
2017-03-05 23:47:31,242 INFO > [started] Resizing patient pixels 177...
2017-03-05 23:47:32,810 INFO > [done] Resizing patient pixels 177 (1567.765 ms)
2017-03-05 23:47:32,812 INFO > [started] Resizing patient pixels 178...
2017-03-05 23:47:34,451 INFO > [done] Resizing patient pixels 178 (1638.856 ms)
2017-03-05 23:47:34,453 INFO > [started] Resizing patient pixels 179...
2017-03-05 23:47:36,068 INFO > [done] Resizing patient pixels 179 (1614.228 ms)
2017-03-05 23:47:36,070 INFO > [started] Resizing patient pixels 180...
2017-03-05 23:47:37,553 INFO > [done] Resizing patient pixels 180 (1482.767 ms)
2017-03-05 23:47:37,555 INFO > [started] Resizing patient pixels 181...
2017-03-05 23:47:39,117 INFO > [done] Resizing patient pixels 181 (1561.564 ms)
2017-03-05 23:47:39,120 INFO > [started] Resizing patient pixels 182...
2017-03-05 23:47:40,671 INFO > [done] Resizing patient pixels 182 (1551.610 ms)
2017-03-05 23:47:40,674 INFO > [started] Resizing patient pixels 183...
2017-03-05 23:47:42,283 INFO > [done] Resizing patient pixels 183 (1609.568 ms)
2017-03-05 23:47:42,286 INFO > [started] Resizing patient pixels 184...
2017-03-05 23:47:43,830 INFO > [done] Resizing patient pixels 184 (1544.679 ms)
2017-03-05 23:47:43,833 INFO > [started] Resizing patient pixels 185...
2017-03-05 23:47:45,358 INFO > [done] Resizing patient pixels 185 (1525.911 ms)
2017-03-05 23:47:45,361 INFO > [started] Resizing patient pixels 186...
2017-03-05 23:47:46,917 INFO > [done] Resizing patient pixels 186 (1556.773 ms)
2017-03-05 23:47:46,919 INFO > [started] Resizing patient pixels 187...
2017-03-05 23:47:48,375 INFO > [done] Resizing patient pixels 187 (1455.954 ms)
2017-03-05 23:47:48,377 INFO > [started] Resizing patient pixels 188...
2017-03-05 23:47:49,787 INFO > [done] Resizing patient pixels 188 (1409.879 ms)
2017-03-05 23:47:49,789 INFO > [started] Resizing patient pixels 189...
2017-03-05 23:47:51,519 INFO > [done] Resizing patient pixels 189 (1729.414 ms)
2017-03-05 23:47:51,521 INFO > [started] Resizing patient pixels 190...
2017-03-05 23:47:53,075 INFO > [done] Resizing patient pixels 190 (1553.697 ms)
2017-03-05 23:47:53,077 INFO > [started] Resizing patient pixels 191...
2017-03-05 23:47:54,671 INFO > [done] Resizing patient pixels 191 (1593.843 ms)
2017-03-05 23:47:54,673 INFO > [started] Resizing patient pixels 192...
2017-03-05 23:47:56,185 INFO > [done] Resizing patient pixels 192 (1512.299 ms)
2017-03-05 23:47:56,187 INFO > [started] Resizing patient pixels 193...
2017-03-05 23:47:57,589 INFO > [done] Resizing patient pixels 193 (1401.558 ms)
2017-03-05 23:47:57,591 INFO > [started] Resizing patient pixels 194...
2017-03-05 23:47:59,110 INFO > [done] Resizing patient pixels 194 (1518.455 ms)
2017-03-05 23:47:59,112 INFO > [started] Resizing patient pixels 195...
2017-03-05 23:48:00,716 INFO > [done] Resizing patient pixels 195 (1604.328 ms)
2017-03-05 23:48:00,718 INFO > [started] Resizing patient pixels 196...
2017-03-05 23:48:02,299 INFO > [done] Resizing patient pixels 196 (1580.865 ms)
2017-03-05 23:48:02,301 INFO > [started] Resizing patient pixels 197...
2017-03-05 23:48:03,832 INFO > [done] Resizing patient pixels 197 (1530.468 ms)
2017-03-05 23:48:03,834 INFO > [started] Resizing patient pixels 198...
2017-03-05 23:48:05,387 INFO > [done] Resizing patient pixels 198 (1552.664 ms)
2017-03-05 23:48:05,389 INFO > [started] Resizing patient pixels 199...
2017-03-05 23:48:06,843 INFO > [done] Resizing patient pixels 199 (1454.163 ms)
2017-03-05 23:48:06,846 INFO > [started] Resizing patient pixels 200...
2017-03-05 23:48:08,374 INFO > [done] Resizing patient pixels 200 (1527.845 ms)
2017-03-05 23:48:08,376 INFO > [started] Resizing patient pixels 201...
2017-03-05 23:48:09,942 INFO > [done] Resizing patient pixels 201 (1566.356 ms)
2017-03-05 23:48:09,944 INFO > [started] Resizing patient pixels 202...
2017-03-05 23:48:11,342 INFO > [done] Resizing patient pixels 202 (1397.853 ms)
2017-03-05 23:48:11,344 INFO > [started] Resizing patient pixels 203...
2017-03-05 23:48:12,853 INFO > [done] Resizing patient pixels 203 (1509.061 ms)
2017-03-05 23:48:12,856 INFO > [started] Resizing patient pixels 204...
2017-03-05 23:48:14,377 INFO > [done] Resizing patient pixels 204 (1521.005 ms)
2017-03-05 23:48:14,379 INFO > [started] Resizing patient pixels 205...
2017-03-05 23:48:15,871 INFO > [done] Resizing patient pixels 205 (1492.405 ms)
2017-03-05 23:48:15,874 INFO > [started] Resizing patient pixels 206...
2017-03-05 23:48:17,375 INFO > [done] Resizing patient pixels 206 (1501.046 ms)
2017-03-05 23:48:17,377 INFO > [started] Resizing patient pixels 207...
2017-03-05 23:48:18,870 INFO > [done] Resizing patient pixels 207 (1493.315 ms)
2017-03-05 23:48:18,872 INFO > [started] Resizing patient pixels 208...
2017-03-05 23:48:20,351 INFO > [done] Resizing patient pixels 208 (1478.808 ms)
2017-03-05 23:48:20,353 INFO > [started] Resizing patient pixels 209...
2017-03-05 23:48:21,789 INFO > [done] Resizing patient pixels 209 (1436.048 ms)
2017-03-05 23:48:21,791 INFO > [started] Resizing patient pixels 210...
2017-03-05 23:48:23,334 INFO > [done] Resizing patient pixels 210 (1542.379 ms)
2017-03-05 23:48:23,336 INFO > [started] Resizing patient pixels 211...
2017-03-05 23:48:24,871 INFO > [done] Resizing patient pixels 211 (1535.171 ms)
2017-03-05 23:48:24,874 INFO > [started] Resizing patient pixels 212...
2017-03-05 23:48:26,443 INFO > [done] Resizing patient pixels 212 (1569.618 ms)
2017-03-05 23:48:26,445 INFO > [started] Resizing patient pixels 213...
2017-03-05 23:48:27,975 INFO > [done] Resizing patient pixels 213 (1529.512 ms)
2017-03-05 23:48:27,977 INFO > [started] Resizing patient pixels 214...
2017-03-05 23:48:29,519 INFO > [done] Resizing patient pixels 214 (1542.332 ms)
2017-03-05 23:48:29,522 INFO > [started] Resizing patient pixels 215...
2017-03-05 23:48:31,034 INFO > [done] Resizing patient pixels 215 (1512.429 ms)
2017-03-05 23:48:31,036 INFO > [started] Resizing patient pixels 216...
2017-03-05 23:48:32,457 INFO > [done] Resizing patient pixels 216 (1420.683 ms)
2017-03-05 23:48:32,459 INFO > [started] Resizing patient pixels 217...
2017-03-05 23:48:33,838 INFO > [done] Resizing patient pixels 217 (1378.950 ms)
2017-03-05 23:48:33,840 INFO > [started] Resizing patient pixels 218...
2017-03-05 23:48:35,221 INFO > [done] Resizing patient pixels 218 (1380.167 ms)
2017-03-05 23:48:35,223 INFO > [started] Resizing patient pixels 219...
2017-03-05 23:48:36,647 INFO > [done] Resizing patient pixels 219 (1423.553 ms)
2017-03-05 23:48:36,650 INFO > [started] Resizing patient pixels 220...
2017-03-05 23:48:37,994 INFO > [done] Resizing patient pixels 220 (1344.768 ms)
2017-03-05 23:48:37,997 INFO > [started] Resizing patient pixels 221...
2017-03-05 23:48:39,406 INFO > [done] Resizing patient pixels 221 (1409.116 ms)
2017-03-05 23:48:39,408 INFO > [started] Resizing patient pixels 222...
2017-03-05 23:48:41,003 INFO > [done] Resizing patient pixels 222 (1595.493 ms)
2017-03-05 23:48:41,005 INFO > [started] Resizing patient pixels 223...
2017-03-05 23:48:42,562 INFO > [done] Resizing patient pixels 223 (1556.098 ms)
2017-03-05 23:48:42,564 INFO > [started] Resizing patient pixels 224...
2017-03-05 23:48:44,198 INFO > [done] Resizing patient pixels 224 (1633.487 ms)
2017-03-05 23:48:44,200 INFO > [started] Resizing patient pixels 225...
2017-03-05 23:48:45,737 INFO > [done] Resizing patient pixels 225 (1536.932 ms)
2017-03-05 23:48:45,739 INFO > [started] Resizing patient pixels 226...
2017-03-05 23:48:47,060 INFO > [done] Resizing patient pixels 226 (1320.874 ms)
2017-03-05 23:48:47,062 INFO > [started] Resizing patient pixels 227...
2017-03-05 23:48:48,591 INFO > [done] Resizing patient pixels 227 (1529.112 ms)
2017-03-05 23:48:48,594 INFO > [started] Resizing patient pixels 228...
2017-03-05 23:48:50,260 INFO > [done] Resizing patient pixels 228 (1666.608 ms)
2017-03-05 23:48:50,263 INFO > [started] Resizing patient pixels 229...
2017-03-05 23:48:51,817 INFO > [done] Resizing patient pixels 229 (1553.734 ms)
2017-03-05 23:48:51,819 INFO > [started] Resizing patient pixels 230...
2017-03-05 23:48:53,452 INFO > [done] Resizing patient pixels 230 (1632.759 ms)
2017-03-05 23:48:53,454 INFO > [started] Resizing patient pixels 231...
2017-03-05 23:48:55,049 INFO > [done] Resizing patient pixels 231 (1594.756 ms)
2017-03-05 23:48:55,051 INFO > [started] Resizing patient pixels 232...
2017-03-05 23:48:56,588 INFO > [done] Resizing patient pixels 232 (1536.711 ms)
2017-03-05 23:48:56,590 INFO > [started] Resizing patient pixels 233...
2017-03-05 23:48:58,124 INFO > [done] Resizing patient pixels 233 (1533.760 ms)
2017-03-05 23:48:58,126 INFO > [started] Resizing patient pixels 234...
2017-03-05 23:48:59,616 INFO > [done] Resizing patient pixels 234 (1490.201 ms)
2017-03-05 23:48:59,619 INFO > [started] Resizing patient pixels 235...
2017-03-05 23:49:01,155 INFO > [done] Resizing patient pixels 235 (1536.217 ms)
2017-03-05 23:49:01,157 INFO > [started] Resizing patient pixels 236...
2017-03-05 23:49:02,592 INFO > [done] Resizing patient pixels 236 (1434.661 ms)
2017-03-05 23:49:02,594 INFO > [started] Resizing patient pixels 237...
2017-03-05 23:49:04,092 INFO > [done] Resizing patient pixels 237 (1498.198 ms)
2017-03-05 23:49:04,095 INFO > [started] Resizing patient pixels 238...
2017-03-05 23:49:05,591 INFO > [done] Resizing patient pixels 238 (1495.754 ms)
2017-03-05 23:49:05,593 INFO > [started] Resizing patient pixels 239...
2017-03-05 23:49:07,081 INFO > [done] Resizing patient pixels 239 (1488.279 ms)
2017-03-05 23:49:07,084 INFO > [started] Resizing patient pixels 240...
2017-03-05 23:49:08,527 INFO > [done] Resizing patient pixels 240 (1443.453 ms)
2017-03-05 23:49:08,529 INFO > [started] Resizing patient pixels 241...
2017-03-05 23:49:10,142 INFO > [done] Resizing patient pixels 241 (1612.843 ms)
2017-03-05 23:49:10,145 INFO > [started] Resizing patient pixels 242...
2017-03-05 23:49:11,621 INFO > [done] Resizing patient pixels 242 (1475.848 ms)
2017-03-05 23:49:11,623 INFO > [started] Resizing patient pixels 243...
2017-03-05 23:49:13,239 INFO > [done] Resizing patient pixels 243 (1616.894 ms)
2017-03-05 23:49:13,242 INFO > [started] Resizing patient pixels 244...
2017-03-05 23:49:14,693 INFO > [done] Resizing patient pixels 244 (1450.762 ms)
2017-03-05 23:49:14,695 INFO > [started] Resizing patient pixels 245...
2017-03-05 23:49:16,413 INFO > [done] Resizing patient pixels 245 (1718.228 ms)
2017-03-05 23:49:16,415 INFO > [started] Resizing patient pixels 246...
2017-03-05 23:49:17,920 INFO > [done] Resizing patient pixels 246 (1504.743 ms)
2017-03-05 23:49:17,922 INFO > [started] Resizing patient pixels 247...
2017-03-05 23:49:19,423 INFO > [done] Resizing patient pixels 247 (1500.372 ms)
2017-03-05 23:49:19,425 INFO > [started] Resizing patient pixels 248...
2017-03-05 23:49:21,072 INFO > [done] Resizing patient pixels 248 (1646.922 ms)
2017-03-05 23:49:21,074 INFO > [started] Resizing patient pixels 249...
2017-03-05 23:49:22,762 INFO > [done] Resizing patient pixels 249 (1687.697 ms)
2017-03-05 23:49:22,764 INFO > [started] Resizing patient pixels 250...
2017-03-05 23:49:24,323 INFO > [done] Resizing patient pixels 250 (1559.111 ms)
2017-03-05 23:49:24,325 INFO > [started] Resizing patient pixels 251...
2017-03-05 23:49:25,879 INFO > [done] Resizing patient pixels 251 (1553.381 ms)
2017-03-05 23:49:25,881 INFO > [started] Resizing patient pixels 252...
2017-03-05 23:49:27,459 INFO > [done] Resizing patient pixels 252 (1577.587 ms)
2017-03-05 23:49:27,461 INFO > [started] Resizing patient pixels 253...
2017-03-05 23:49:28,995 INFO > [done] Resizing patient pixels 253 (1533.528 ms)
2017-03-05 23:49:28,997 INFO > [started] Resizing patient pixels 254...
2017-03-05 23:49:30,518 INFO > [done] Resizing patient pixels 254 (1521.851 ms)
2017-03-05 23:49:30,520 INFO > [started] Resizing patient pixels 255...
2017-03-05 23:49:32,200 INFO > [done] Resizing patient pixels 255 (1679.060 ms)
2017-03-05 23:49:32,202 INFO > [started] Resizing patient pixels 256...
2017-03-05 23:49:33,654 INFO > [done] Resizing patient pixels 256 (1452.283 ms)
2017-03-05 23:49:33,657 INFO > [started] Resizing patient pixels 257...
2017-03-05 23:49:35,245 INFO > [done] Resizing patient pixels 257 (1588.470 ms)
2017-03-05 23:49:35,247 INFO > [started] Resizing patient pixels 258...
2017-03-05 23:49:36,770 INFO > [done] Resizing patient pixels 258 (1522.761 ms)
2017-03-05 23:49:36,772 INFO > [started] Resizing patient pixels 259...
2017-03-05 23:49:38,365 INFO > [done] Resizing patient pixels 259 (1593.122 ms)
2017-03-05 23:49:38,368 INFO > [started] Resizing patient pixels 260...
2017-03-05 23:49:39,780 INFO > [done] Resizing patient pixels 260 (1412.458 ms)
2017-03-05 23:49:39,782 INFO > [started] Resizing patient pixels 261...
2017-03-05 23:49:41,344 INFO > [done] Resizing patient pixels 261 (1561.538 ms)
2017-03-05 23:49:41,346 INFO > [started] Resizing patient pixels 262...
2017-03-05 23:49:42,767 INFO > [done] Resizing patient pixels 262 (1420.830 ms)
2017-03-05 23:49:42,769 INFO > [started] Resizing patient pixels 263...
2017-03-05 23:49:44,301 INFO > [done] Resizing patient pixels 263 (1531.550 ms)
2017-03-05 23:49:44,303 INFO > [started] Resizing patient pixels 264...
2017-03-05 23:49:45,785 INFO > [done] Resizing patient pixels 264 (1482.143 ms)
2017-03-05 23:49:45,788 INFO > [started] Resizing patient pixels 265...
2017-03-05 23:49:47,286 INFO > [done] Resizing patient pixels 265 (1498.554 ms)
2017-03-05 23:49:47,288 INFO > [started] Resizing patient pixels 266...
2017-03-05 23:49:48,716 INFO > [done] Resizing patient pixels 266 (1427.492 ms)
2017-03-05 23:49:48,718 INFO > [started] Resizing patient pixels 267...
2017-03-05 23:49:50,217 INFO > [done] Resizing patient pixels 267 (1499.632 ms)
2017-03-05 23:49:50,220 INFO > [started] Resizing patient pixels 268...
2017-03-05 23:49:51,974 INFO > [done] Resizing patient pixels 268 (1754.525 ms)
2017-03-05 23:49:51,976 INFO > [started] Resizing patient pixels 269...
2017-03-05 23:49:53,528 INFO > [done] Resizing patient pixels 269 (1551.949 ms)
2017-03-05 23:49:53,530 INFO > [started] Resizing patient pixels 270...
2017-03-05 23:49:55,145 INFO > [done] Resizing patient pixels 270 (1614.683 ms)
2017-03-05 23:49:55,147 INFO > [started] Resizing patient pixels 271...
2017-03-05 23:49:56,653 INFO > [done] Resizing patient pixels 271 (1506.011 ms)
2017-03-05 23:49:56,656 INFO > [started] Resizing patient pixels 272...
2017-03-05 23:49:58,209 INFO > [done] Resizing patient pixels 272 (1552.914 ms)
2017-03-05 23:49:58,211 INFO > [started] Resizing patient pixels 273...
2017-03-05 23:49:59,653 INFO > [done] Resizing patient pixels 273 (1441.641 ms)
2017-03-05 23:49:59,655 INFO > [started] Resizing patient pixels 274...
2017-03-05 23:50:01,216 INFO > [done] Resizing patient pixels 274 (1560.998 ms)
2017-03-05 23:50:01,218 INFO > [started] Resizing patient pixels 275...
2017-03-05 23:50:02,909 INFO > [done] Resizing patient pixels 275 (1691.154 ms)
2017-03-05 23:50:02,912 INFO > [started] Resizing patient pixels 276...
2017-03-05 23:50:04,442 INFO > [done] Resizing patient pixels 276 (1530.373 ms)
2017-03-05 23:50:04,444 INFO > [started] Resizing patient pixels 277...
2017-03-05 23:50:06,014 INFO > [done] Resizing patient pixels 277 (1569.717 ms)
2017-03-05 23:50:06,016 INFO > [started] Resizing patient pixels 278...
2017-03-05 23:50:07,489 INFO > [done] Resizing patient pixels 278 (1472.550 ms)
2017-03-05 23:50:07,491 INFO > [started] Resizing patient pixels 279...
2017-03-05 23:50:09,004 INFO > [done] Resizing patient pixels 279 (1513.007 ms)
2017-03-05 23:50:09,007 INFO > [started] Resizing patient pixels 280...
2017-03-05 23:50:10,517 INFO > [done] Resizing patient pixels 280 (1510.772 ms)
2017-03-05 23:50:10,520 INFO > [started] Resizing patient pixels 281...
2017-03-05 23:50:12,016 INFO > [done] Resizing patient pixels 281 (1496.145 ms)
2017-03-05 23:50:12,018 INFO > [started] Resizing patient pixels 282...
2017-03-05 23:50:13,561 INFO > [done] Resizing patient pixels 282 (1543.581 ms)
2017-03-05 23:50:13,563 INFO > [started] Resizing patient pixels 283...
2017-03-05 23:50:15,144 INFO > [done] Resizing patient pixels 283 (1580.702 ms)
2017-03-05 23:50:15,147 INFO > [started] Resizing patient pixels 284...
2017-03-05 23:50:16,571 INFO > [done] Resizing patient pixels 284 (1423.840 ms)
2017-03-05 23:50:16,573 INFO > [started] Resizing patient pixels 285...
2017-03-05 23:50:18,191 INFO > [done] Resizing patient pixels 285 (1617.955 ms)
2017-03-05 23:50:18,193 INFO > [started] Resizing patient pixels 286...
2017-03-05 23:50:19,711 INFO > [done] Resizing patient pixels 286 (1517.765 ms)
2017-03-05 23:50:19,713 INFO > [started] Resizing patient pixels 287...
2017-03-05 23:50:21,136 INFO > [done] Resizing patient pixels 287 (1423.459 ms)
2017-03-05 23:50:21,139 INFO > [started] Resizing patient pixels 288...
2017-03-05 23:50:22,537 INFO > [done] Resizing patient pixels 288 (1397.870 ms)
2017-03-05 23:50:22,539 INFO > [started] Resizing patient pixels 289...
2017-03-05 23:50:24,000 INFO > [done] Resizing patient pixels 289 (1461.351 ms)
2017-03-05 23:50:24,002 INFO > [started] Resizing patient pixels 290...
2017-03-05 23:50:25,828 INFO > [done] Resizing patient pixels 290 (1825.798 ms)
2017-03-05 23:50:25,831 INFO > [started] Resizing patient pixels 291...
2017-03-05 23:50:27,503 INFO > [done] Resizing patient pixels 291 (1672.822 ms)
2017-03-05 23:50:27,506 INFO > [started] Resizing patient pixels 292...
2017-03-05 23:50:29,067 INFO > [done] Resizing patient pixels 292 (1561.244 ms)
2017-03-05 23:50:29,069 INFO > [started] Resizing patient pixels 293...
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Content source: flaviostutz/datascience-snippets
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