In [1]:
require 'linkdb'
Out[1]:
Out[1]:
true
In [5]:
Linkdb.fetch("hsa:127")
Out[5]:
name type option 0 hsa:127 RG002:008518058 reverse 1 hsa:127 br:br08301 reverse 2 hsa:127 br:br08303 reverse 3 hsa:127 br:br08310 reverse 4 hsa:127 br:hsa00001 original 5 hsa:127 br:hsa01000 original 6 hsa:127 brc-dna:HGY094945 reverse 7 hsa:127 cpd:C00001 indirect 8 hsa:127 cpd:C00003 indirect 9 hsa:127 cpd:C00004 indirect 10 hsa:127 cpd:C00071 indirect 11 hsa:127 cpd:C00080 indirect 12 hsa:127 cpd:C00084 indirect 13 hsa:127 cpd:C00226 indirect 14 hsa:127 cpd:C00376 indirect 15 hsa:127 cpd:C00469 indirect 16 hsa:127 cpd:C00473 indirect 17 hsa:127 cpd:C05576 indirect 18 hsa:127 cpd:C05577 indirect 19 hsa:127 cpd:C06899 indirect 20 hsa:127 cpd:C07490 indirect 21 hsa:127 cpd:C07645 indirect 22 hsa:127 cpd:C16551 indirect 23 hsa:127 cpd:C16586 indirect 24 hsa:127 cpd:C16587 indirect 25 hsa:127 cpd:C16595 indirect 26 hsa:127 cpd:C16596 indirect 27 hsa:127 dr:D00707 original 28 hsa:127 ec:1.1.1.1 original 29 hsa:127 emb:AK290835 equivalent 30 hsa:127 emb:AK295556 equivalent 31 hsa:127 emb:AK313649 equivalent 32 hsa:127 emb:AV658711 equivalent 33 hsa:127 emb:AV659353 equivalent 34 hsa:127 emb:AV659364 equivalent 35 hsa:127 emb:BC022319 equivalent 36 hsa:127 emb:CD014080 equivalent 37 hsa:127 emb:EU668317 equivalent 38 hsa:127 emb:HQ447691 equivalent 39 hsa:127 emb:M15943 equivalent 40 hsa:127 ensembl-hsa:ENSG00000198099 original 41 hsa:127 gb:AK290835 equivalent 42 hsa:127 gb:AK295556 equivalent 43 hsa:127 gb:AK313649 equivalent 44 hsa:127 gb:AV658711 equivalent 45 hsa:127 gb:AV659353 equivalent 46 hsa:127 gb:AV659364 equivalent 47 hsa:127 gb:BC022319 equivalent 48 hsa:127 gb:CD014080 equivalent 49 hsa:127 gb:EU668317 equivalent 50 hsa:127 gb:HQ447691 equivalent ... ... ... ... 99 hsa:127 vega:OTTHUMG00000161227 original
In [4]:
Linkdb.fetch("C00077","D00076", db: "path")
Out[4]:
name type option 0 cpd:C00077 path:map00220 original 1 cpd:C00077 path:map00330 original 2 cpd:C00077 path:map00472 original 3 cpd:C00077 path:map00480 original 4 cpd:C00077 path:map01060 original 5 cpd:C00077 path:map01064 original 6 cpd:C00077 path:map01100 original 7 cpd:C00077 path:map01110 original 8 cpd:C00077 path:map01130 original 9 cpd:C00077 path:map01210 original 10 cpd:C00077 path:map01230 original 11 cpd:C00077 path:map02010 original 12 dr:D00076 path:hsa04020 original 13 dr:D00076 path:hsa04080 original 14 dr:D00076 path:hsa04261 original 15 dr:D00076 path:hsa04270 original 16 dr:D00076 path:hsa04970 original 17 dr:D00076 path:map07215 original
In [6]:
Linkdb.fetch("C00077","D00076", db: "genes")
Out[6]:
name type option 0 cpd:C00077 aaa:Acav_0153 indirect 1 cpd:C00077 aaa:Acav_0154 indirect 2 cpd:C00077 aaa:Acav_0187 indirect 3 cpd:C00077 aaa:Acav_0685 indirect 4 cpd:C00077 aaa:Acav_1835 indirect 5 cpd:C00077 aaa:Acav_3603 indirect 6 cpd:C00077 aac:Aaci_0321 indirect 7 cpd:C00077 aac:Aaci_0322 indirect 8 cpd:C00077 aac:Aaci_1227 indirect 9 cpd:C00077 aad:TC41_0436 indirect 10 cpd:C00077 aad:TC41_0437 indirect 11 cpd:C00077 aad:TC41_1137 indirect 12 cpd:C00077 aae:aq_1711 indirect 13 cpd:C00077 aae:aq_728 indirect 14 cpd:C00077 aae:aq_970 indirect 15 cpd:C00077 aag:AaeL_AAEL000044 indirect 16 cpd:C00077 aag:AaeL_AAEL002675 indirect 17 cpd:C00077 aag:AaeL_AAEL005289 indirect 18 cpd:C00077 aag:AaeL_AAEL007878 indirect 19 cpd:C00077 aag:AaeL_AAEL007880 indirect 20 cpd:C00077 aag:AaeL_AAEL007887 indirect 21 cpd:C00077 aag:AaeL_AAEL011206 indirect 22 cpd:C00077 aah:CF65_00381 indirect 23 cpd:C00077 aai:AARI_11450 indirect 24 cpd:C00077 aai:AARI_11480 indirect 25 cpd:C00077 aai:AARI_15430 indirect 26 cpd:C00077 aal:EP13_02330 indirect 27 cpd:C00077 aan:D7S_01804 indirect 28 cpd:C00077 aao:ANH9381_0416 indirect 29 cpd:C00077 aap:NT05HA_2158 indirect 30 cpd:C00077 aar:Acear_0197 indirect 31 cpd:C00077 aar:Acear_1533 indirect 32 cpd:C00077 aar:Acear_1551 indirect 33 cpd:C00077 aat:D11S_0084 indirect 34 cpd:C00077 aau:AAur_1632 indirect 35 cpd:C00077 aau:AAur_1635 indirect 36 cpd:C00077 aaus:EP12_02435 indirect 37 cpd:C00077 aav:Aave_0120 indirect 38 cpd:C00077 aav:Aave_0121 indirect 39 cpd:C00077 aav:Aave_0151 indirect 40 cpd:C00077 aav:Aave_0769 indirect 41 cpd:C00077 aav:Aave_3400 indirect 42 cpd:C00077 aav:Aave_3688 indirect 43 cpd:C00077 aay:WYH_00701 indirect 44 cpd:C00077 aay:WYH_00749 indirect 45 cpd:C00077 aay:WYH_01859 indirect 46 cpd:C00077 aay:WYH_02439 indirect 47 cpd:C00077 aay:WYH_02554 indirect 48 cpd:C00077 aba:Acid345_1819 indirect 49 cpd:C00077 aba:Acid345_1822 indirect 50 cpd:C00077 aba:Acid345_4159 indirect ... ... ... ... 14246 dr:D00076 hsa:4128 original
Content source: domitry/linkdb
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