notebook.community

Edit and run



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import json, requests

# BASE = "http://localhost:3000/" # Local machine
BASE = "http://192.168.99.100:3000/" # Local Docker instance
# BASE = "http://192.168.99.100:8080/cx/v1/" # Agent on Docker

def jprint(data):
    print(json.dumps(data, indent=4))



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# Load sample CX file
with open("galcxStyle2.json") as json_file:
    cx = json.load(json_file)



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# %%timeit -n 10
# From CX to Cytoscape.js JSON
res = requests.post(BASE + "converter/cx2cyjs", json=cx)
cyjsJson = res.json()

jprint(cyjsJson)



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# From CX to SIF
res = requests.post(BASE + "converter/cx2sif", json=cx)
sif = res.content

print(sif.decode("utf-8"))