A basic THREDDS crawler generating a flat tree (parent, children but not retaining the nested tree of the TDS response).
Runs a GET against catalog responses and a HEAD (do not download the actual data files) against the leaf Dataset items.
To run, initialize some local server for the files in notebooks/xml_samples:
python -m SimpleHTTPServer 8082Note: this doesn't handle every TDS structure
In [36]:
import os
import json
import sys
from lxml import etree
import urlparse
import urllib
import requests
from datetime import datetime
import logging
reload(logging)
# TODO: shift this to set up a named logger per crawl here
logger = logging.getLogger(__name__)
handler = logging.FileHandler(filename="logs/tds_%s.log" % datetime.now().strftime('%Y%m%d-%H%M'), mode="a")
logger.addHandler(handler)
logger.setLevel(logging.DEBUG)
def generate_path(extension):
return os.path.join('xml_samples', extension)
# NOTE: starting with just the catalog.xml requests
def generate_url(parent_url, rel_path, query_params={}):
logger.debug('Parsing {0}, {1}'.format(parent_url, rel_path))
if urlparse.urlparse(rel_path).scheme:
logger.debug('Contained full path {0}'.format(rel_path))
return rel_path
parts = urlparse.urlparse(parent_url)
rel_path = rel_path[1:] if rel_path.startswith('/') else rel_path
rel_paths = rel_path.split('/')
url_paths = parts.path.split('/')
match_index = url_paths.index(rel_paths[0]) if rel_paths[0] in url_paths else -1
query = urllib.urlencode(query_params) if query_params else None
logger.debug('QUERY parameters: {0}'.format(query))
if match_index < 0:
# it does not intersect, just combine
new_url = urlparse.urljoin(parent_url.replace('catalog.xml', ''), rel_path)
else:
new_url = urlparse.urljoin(urlparse.urlunparse((
parts.scheme,
parts.netloc,
'/'.join(url_paths[0:match_index + 1]),
None,
None,
None
)), rel_path)
new_url += '?' + query if query else ''
logger.debug('Generated url = {0} : {1}'.format(new_url, query_params != {}))
return new_url
def head(url):
try:
req = requests.head(url)
return req.status_code, ''
except Exception as ex:
logger.error('head: {0}: {1}'.format(url, ex))
# raise
return 900, ''
def get(url):
# return the status code and content if get
try:
req = requests.get(url)
return req.status_code, req.content
except Exception as ex:
logger.error('get: {0}: {1}'.format(url, ex))
# raise
return 900, ''
def parse_xml(text):
try:
parser = etree.XMLParser(
remove_blank_text=True,
remove_comments=True,
recover=True,
remove_pis=True
)
return etree.fromstring(text, parser=parser)
except:
return None
def extract_element_tag(tag):
if not tag:
return ''
return tag.split('}')[-1]
class Crawl(object):
def __init__(self, path, from_root=False):
self.path = path
if from_root:
root_path = self._find_root_url()
if root_path != self.path:
logger.debug('Adjusted for root catalog.xml: {0}'.format(root_path))
self.path = root_path
self.crawl()
def _find_root_url(self):
'''
before parsing the larger tree, check that the catalog_url
is the root node - return the shortest url that's good
'''
parts = urlparse.urlparse(self.path)
route_parts = parts.path.split('/')
route_parts = [r for r in route_parts if r and r != 'catalog.xml']
founds = []
for i in xrange(len(route_parts) + 1):
route = urlparse.urlunparse(
(parts.scheme,
parts.netloc,
'/'.join(route_parts[:len(route_parts) - i] + ['catalog.xml']),
parts.params,
parts.query,
parts.fragment)
)
req = requests.head(route)
status_code = req.status_code
if status_code in [200, 304]:
founds.append(route)
return self.path if not founds else min(founds)
def _get(self, path):
# url = generate_path(path)
# url = generate_url(path)
status_code, response = get(path)
logger.info('GET Request {0}: {1}'.format(path, status_code))
return status_code, response
def _parse(self, response):
# parse the xml
xml = parse_xml(response)
# logger.debug('parsed file {0}'.format(path))
return xml
def crawl(self):
# start at the path, iterate through the catalogRefs
# and generate the tree of links
fetched = []
to_fetch = [self.path]
tree = {}
while to_fetch:
path = to_fetch.pop()
# TODO: check on this
if path in fetched:
logger.debug('Previously crawled today: {0}'.format(path))
continue
logger.debug('starting paths to follow: {0} : {1}'.format(len(to_fetch), path))
status_code, response = self._get(path)
if status_code != 200:
# bail but note the error
logger.debug('Get URL failed: {0} with {1}'.format(path, status_code))
tree[path] = {"status": status_code}
continue
xml = self._parse(response)
logger.debug('Has XML = {0}'.format(xml is not None))
services = xml.xpath('//*[local-name()="service" and @base != ""]/@*[local-name()="base"]')
services = [s[:-1] if s.endswith('/') else s for s in services]
logger.debug('Services found = {0}: {1}'.format(len(services), services))
elements = xml.xpath('//*[local-name()="catalogRef" or local-name()="dataset"]')
logger.debug('number of elements found {0}'.format(len(elements)))
children = []
for element in elements:
tag = extract_element_tag(element.tag)
logger.debug('{0} element in {1} ({2})'.format(tag.upper(), path, element.attrib.get('ID', 'NO ID')))
# and then parse the specific bits
if tag == 'dataset':
elem = Dataset(path, element, services)
elif tag == 'catalogRef':
elem = CatalogRef(path, element)
# this is like a list of one. good job.
hrefs = [elem.description.get('href', '')]
hrefs = [h for h in hrefs if h]
new_urls = [generate_url(path, href) for href in hrefs]
if not elem.terminus:
to_fetch = list(set(to_fetch + new_urls))
children.append(elem.description)
tree[path] = {"status": status_code, "children": children}
fetched.append(path)
logger.debug('fetched paths {0} ({1})'.format(len(fetched), len(to_fetch)))
return tree
class CatalogRef(object):
def __init__(self, path, element):
self.path = path
self.element = element
self.description = self._parse()
self.terminus = False
def _parse(self):
# parse the xml
name = self.element.attrib.get('name', '')
cat_id = self.element.attrib.get('ID', '')
title = self.element.attrib.get('title', '')
href = self.element.attrib.get('{http://www.w3.org/1999/xlink}href', '')
tag = extract_element_tag(self.element.tag)
# get the parent
parent = self.element.getparent()
parent_tag = extract_element_tag(parent.tag)
parent_id = parent.attrib.get('ID', '') if parent_tag != 'catalog' else ''
description = {
'id': cat_id,
'href': href,
'type': tag
}
if name:
description.update({'name': name})
if title:
description.update({'title': title})
if parent_id:
description.update({'parent': parent_id, 'parent_type': parent_tag})
return description
class Dataset(object):
# where services is the list of bases for this example
def __init__(self, path, element, services):
self.path = path
self.element = element
self.services = services
self.description = self._parse()
def _get_wxs_params(self, wxs):
# add some query parameters
if 'wms' in wxs.lower():
return {'service': 'wms', 'request': 'getcapabilities', 'version': '1.3.0'}
elif 'wfs' in wxs.lower():
return {'service': 'wfs', 'request': 'getcapabilities', 'version': '1.1.0'}
elif 'wcs' in wxs.lower():
return {'service': 'wcs', 'request': 'getcapabilities', 'version': '1.1.2'}
else:
return None
def _parse(self):
# parse the xml
name = self.element.attrib.get('name', '')
dataset_id = self.element.attrib.get('ID', '')
href = self.element.attrib.get('urlPath', None)
if not href:
href = next(iter(self.element.xpath('*[local-name()="access"]/@*[local-name()="urlPath"]')), None)
# get the parent
parent = self.element.getparent()
parent_tag = extract_element_tag(parent.tag)
parent_id = parent.attrib.get('ID', '') if parent_tag != 'catalog' else ''
self.terminus = href is not None and href != ''
hrefs = []
urls = []
if href:
hrefs = [generate_url(
self.path, '/'.join([service, href]),
self._get_wxs_params(service)
) for service in self.services if service]
# make the HEAD requests here - does the endopint exist?
# and store in a tuple? because we aren't going to follow the path anyway
for h in list(set(hrefs)):
status_code, response = head(h)
logger.info('HEAD Request {0}: {1}'.format(h, status_code))
# save the response
urls.append((h, status_code))
date = next(iter(self.element.xpath('*[local-name()="date"]/text()')), '')
description = {
'id': dataset_id
}
if urls:
description.update({'urls': urls})
if name:
description.update({'name': name})
if date:
description.update({'date': date})
if parent_id:
description.update({'parent': parent_id, 'parent_type': parent_tag})
return description
In [75]:
# crawler = Crawl('catalog.xml')
# crawler = Crawl('TSData/catalog.xml')
# crawling from a local file store (the xml_samples set)
# via python -m SimpleHTTPServer 8082
crawler = Crawl('http://localhost:8082/thredds/catalog/catalog.xml')
tree = crawler.crawl()
print '***************'
print 'crawl complete:'
tree
***************
crawl complete:
Out[75]:
{'http://localhost:8082/thredds/catalog/TSdata/ARGO_MERCHANT/catalog.xml': {'children': [{'id': 'TSdata/ARGO_MERCHANT',
'name': 'ARGO_MERCHANT'},
{'date': '2014-12-02T20:32:46Z',
'id': 'TSdata/ARGO_MERCHANT/1211-A1H.cdf',
'name': '1211-A1H.cdf',
'parent': 'TSdata/ARGO_MERCHANT',
'parent_type': 'dataset',
'urls': [('http://localhost:8082/thredds/dodsC/TSdata/ARGO_MERCHANT/1211-A1H.cdf',
404),
('http://localhost:8082/thredds/fileServer/TSdata/ARGO_MERCHANT/1211-A1H.cdf',
404),
('http://localhost:8082/thredds/wcs/TSdata/ARGO_MERCHANT/1211-A1H.cdf',
404),
('http://localhost:8082/thredds/ncss/grid/TSdata/ARGO_MERCHANT/1211-A1H.cdf',
404),
('http://localhost:8082/thredds/wms/TSdata/ARGO_MERCHANT/1211-A1H.cdf',
404),
('http://localhost:8082/thredds/iso/TSdata/ARGO_MERCHANT/1211-A1H.cdf',
404),
('http://localhost:8082/thredds/ncml/TSdata/ARGO_MERCHANT/1211-A1H.cdf',
404),
('http://localhost:8082/thredds/uddc/TSdata/ARGO_MERCHANT/1211-A1H.cdf',
404)]},
{'date': '2014-12-02T20:32:46Z',
'id': 'TSdata/ARGO_MERCHANT/1211-AA.cdf',
'name': '1211-AA.cdf',
'parent': 'TSdata/ARGO_MERCHANT',
'parent_type': 'dataset',
'urls': [('http://localhost:8082/thredds/dodsC/TSdata/ARGO_MERCHANT/1211-AA.cdf',
404),
('http://localhost:8082/thredds/fileServer/TSdata/ARGO_MERCHANT/1211-AA.cdf',
404),
('http://localhost:8082/thredds/wcs/TSdata/ARGO_MERCHANT/1211-AA.cdf',
404),
('http://localhost:8082/thredds/ncss/grid/TSdata/ARGO_MERCHANT/1211-AA.cdf',
404),
('http://localhost:8082/thredds/wms/TSdata/ARGO_MERCHANT/1211-AA.cdf',
404),
('http://localhost:8082/thredds/iso/TSdata/ARGO_MERCHANT/1211-AA.cdf',
404),
('http://localhost:8082/thredds/ncml/TSdata/ARGO_MERCHANT/1211-AA.cdf',
404),
('http://localhost:8082/thredds/uddc/TSdata/ARGO_MERCHANT/1211-AA.cdf',
404)]},
{'date': '2014-12-02T20:32:46Z',
'id': 'TSdata/ARGO_MERCHANT/1211P-A.cdf',
'name': '1211P-A.cdf',
'parent': 'TSdata/ARGO_MERCHANT',
'parent_type': 'dataset',
'urls': [('http://localhost:8082/thredds/dodsC/TSdata/ARGO_MERCHANT/1211P-A.cdf',
404),
('http://localhost:8082/thredds/fileServer/TSdata/ARGO_MERCHANT/1211P-A.cdf',
404),
('http://localhost:8082/thredds/wcs/TSdata/ARGO_MERCHANT/1211P-A.cdf',
404),
('http://localhost:8082/thredds/ncss/grid/TSdata/ARGO_MERCHANT/1211P-A.cdf',
404),
('http://localhost:8082/thredds/wms/TSdata/ARGO_MERCHANT/1211P-A.cdf',
404),
('http://localhost:8082/thredds/iso/TSdata/ARGO_MERCHANT/1211P-A.cdf',
404),
('http://localhost:8082/thredds/ncml/TSdata/ARGO_MERCHANT/1211P-A.cdf',
404),
('http://localhost:8082/thredds/uddc/TSdata/ARGO_MERCHANT/1211P-A.cdf',
404)]},
{'date': '2014-12-02T20:32:46Z',
'id': 'TSdata/ARGO_MERCHANT/1211P-A1H.cdf',
'name': '1211P-A1H.cdf',
'parent': 'TSdata/ARGO_MERCHANT',
'parent_type': 'dataset',
'urls': [('http://localhost:8082/thredds/dodsC/TSdata/ARGO_MERCHANT/1211P-A1H.cdf',
404),
('http://localhost:8082/thredds/fileServer/TSdata/ARGO_MERCHANT/1211P-A1H.cdf',
404),
('http://localhost:8082/thredds/wcs/TSdata/ARGO_MERCHANT/1211P-A1H.cdf',
404),
('http://localhost:8082/thredds/ncss/grid/TSdata/ARGO_MERCHANT/1211P-A1H.cdf',
404),
('http://localhost:8082/thredds/wms/TSdata/ARGO_MERCHANT/1211P-A1H.cdf',
404),
('http://localhost:8082/thredds/iso/TSdata/ARGO_MERCHANT/1211P-A1H.cdf',
404),
('http://localhost:8082/thredds/ncml/TSdata/ARGO_MERCHANT/1211P-A1H.cdf',
404),
('http://localhost:8082/thredds/uddc/TSdata/ARGO_MERCHANT/1211P-A1H.cdf',
404)]},
{'date': '2014-12-02T20:32:47Z',
'id': 'TSdata/ARGO_MERCHANT/1211TR-A.cdf',
'name': '1211TR-A.cdf',
'parent': 'TSdata/ARGO_MERCHANT',
'parent_type': 'dataset',
'urls': [('http://localhost:8082/thredds/dodsC/TSdata/ARGO_MERCHANT/1211TR-A.cdf',
404),
('http://localhost:8082/thredds/fileServer/TSdata/ARGO_MERCHANT/1211TR-A.cdf',
404),
('http://localhost:8082/thredds/wcs/TSdata/ARGO_MERCHANT/1211TR-A.cdf',
404),
('http://localhost:8082/thredds/ncss/grid/TSdata/ARGO_MERCHANT/1211TR-A.cdf',
404),
('http://localhost:8082/thredds/wms/TSdata/ARGO_MERCHANT/1211TR-A.cdf',
404),
('http://localhost:8082/thredds/iso/TSdata/ARGO_MERCHANT/1211TR-A.cdf',
404),
('http://localhost:8082/thredds/ncml/TSdata/ARGO_MERCHANT/1211TR-A.cdf',
404),
('http://localhost:8082/thredds/uddc/TSdata/ARGO_MERCHANT/1211TR-A.cdf',
404)]},
{'date': '2014-12-02T20:32:47Z',
'id': 'TSdata/ARGO_MERCHANT/1211TR-A1H.cdf',
'name': '1211TR-A1H.cdf',
'parent': 'TSdata/ARGO_MERCHANT',
'parent_type': 'dataset',
'urls': [('http://localhost:8082/thredds/dodsC/TSdata/ARGO_MERCHANT/1211TR-A1H.cdf',
404),
('http://localhost:8082/thredds/fileServer/TSdata/ARGO_MERCHANT/1211TR-A1H.cdf',
404),
('http://localhost:8082/thredds/wcs/TSdata/ARGO_MERCHANT/1211TR-A1H.cdf',
404),
('http://localhost:8082/thredds/ncss/grid/TSdata/ARGO_MERCHANT/1211TR-A1H.cdf',
404),
('http://localhost:8082/thredds/wms/TSdata/ARGO_MERCHANT/1211TR-A1H.cdf',
404),
('http://localhost:8082/thredds/iso/TSdata/ARGO_MERCHANT/1211TR-A1H.cdf',
404),
('http://localhost:8082/thredds/ncml/TSdata/ARGO_MERCHANT/1211TR-A1H.cdf',
404),
('http://localhost:8082/thredds/uddc/TSdata/ARGO_MERCHANT/1211TR-A1H.cdf',
404)]}],
'status': 200},
'http://localhost:8082/thredds/catalog/TSdata/BARNEGAT/catalog.xml': {'children': [{'id': 'TSdata/BARNEGAT',
'name': 'BARNEGAT'},
{'date': '2014-12-02T20:32:47Z',
'id': 'TSdata/BARNEGAT/9611ecp-a.nc',
'name': '9611ecp-a.nc',
'parent': 'TSdata/BARNEGAT',
'parent_type': 'dataset',
'urls': [('http://localhost:8082/thredds/dodsC/TSdata/BARNEGAT/9611ecp-a.nc',
404),
('http://localhost:8082/thredds/fileServer/TSdata/BARNEGAT/9611ecp-a.nc',
404),
('http://localhost:8082/thredds/wcs/TSdata/BARNEGAT/9611ecp-a.nc', 404),
('http://localhost:8082/thredds/ncss/grid/TSdata/BARNEGAT/9611ecp-a.nc',
404),
('http://localhost:8082/thredds/wms/TSdata/BARNEGAT/9611ecp-a.nc', 404),
('http://localhost:8082/thredds/iso/TSdata/BARNEGAT/9611ecp-a.nc', 404),
('http://localhost:8082/thredds/ncml/TSdata/BARNEGAT/9611ecp-a.nc', 404),
('http://localhost:8082/thredds/uddc/TSdata/BARNEGAT/9611ecp-a.nc',
404)]},
{'date': '2014-12-02T20:32:47Z',
'id': 'TSdata/BARNEGAT/9612solot-a.nc',
'name': '9612solot-a.nc',
'parent': 'TSdata/BARNEGAT',
'parent_type': 'dataset',
'urls': [('http://localhost:8082/thredds/dodsC/TSdata/BARNEGAT/9612solot-a.nc',
404),
('http://localhost:8082/thredds/fileServer/TSdata/BARNEGAT/9612solot-a.nc',
404),
('http://localhost:8082/thredds/wcs/TSdata/BARNEGAT/9612solot-a.nc', 404),
('http://localhost:8082/thredds/ncss/grid/TSdata/BARNEGAT/9612solot-a.nc',
404),
('http://localhost:8082/thredds/wms/TSdata/BARNEGAT/9612solot-a.nc', 404),
('http://localhost:8082/thredds/iso/TSdata/BARNEGAT/9612solot-a.nc', 404),
('http://localhost:8082/thredds/ncml/TSdata/BARNEGAT/9612solot-a.nc',
404),
('http://localhost:8082/thredds/uddc/TSdata/BARNEGAT/9612solot-a.nc',
404)]},
{'date': '2014-12-02T20:32:48Z',
'id': 'TSdata/BARNEGAT/9613HRaqd-cal.nc',
'name': '9613HRaqd-cal.nc',
'parent': 'TSdata/BARNEGAT',
'parent_type': 'dataset',
'urls': [('http://localhost:8082/thredds/dodsC/TSdata/BARNEGAT/9613HRaqd-cal.nc',
404),
('http://localhost:8082/thredds/fileServer/TSdata/BARNEGAT/9613HRaqd-cal.nc',
404),
('http://localhost:8082/thredds/wcs/TSdata/BARNEGAT/9613HRaqd-cal.nc',
404),
('http://localhost:8082/thredds/ncss/grid/TSdata/BARNEGAT/9613HRaqd-cal.nc',
404),
('http://localhost:8082/thredds/wms/TSdata/BARNEGAT/9613HRaqd-cal.nc',
404),
('http://localhost:8082/thredds/iso/TSdata/BARNEGAT/9613HRaqd-cal.nc',
404),
('http://localhost:8082/thredds/ncml/TSdata/BARNEGAT/9613HRaqd-cal.nc',
404),
('http://localhost:8082/thredds/uddc/TSdata/BARNEGAT/9613HRaqd-cal.nc',
404)]},
{'date': '2014-12-02T20:32:58Z',
'id': 'TSdata/BARNEGAT/9614dw-a.nc',
'name': '9614dw-a.nc',
'parent': 'TSdata/BARNEGAT',
'parent_type': 'dataset',
'urls': [('http://localhost:8082/thredds/dodsC/TSdata/BARNEGAT/9614dw-a.nc',
404),
('http://localhost:8082/thredds/fileServer/TSdata/BARNEGAT/9614dw-a.nc',
404),
('http://localhost:8082/thredds/wcs/TSdata/BARNEGAT/9614dw-a.nc', 404),
('http://localhost:8082/thredds/ncss/grid/TSdata/BARNEGAT/9614dw-a.nc',
404),
('http://localhost:8082/thredds/wms/TSdata/BARNEGAT/9614dw-a.nc', 404),
('http://localhost:8082/thredds/iso/TSdata/BARNEGAT/9614dw-a.nc', 404),
('http://localhost:8082/thredds/ncml/TSdata/BARNEGAT/9614dw-a.nc', 404),
('http://localhost:8082/thredds/uddc/TSdata/BARNEGAT/9614dw-a.nc', 404)]},
{'date': '2014-12-02T20:32:58Z',
'id': 'TSdata/BARNEGAT/9615exo-a.nc',
'name': '9615exo-a.nc',
'parent': 'TSdata/BARNEGAT',
'parent_type': 'dataset',
'urls': [('http://localhost:8082/thredds/dodsC/TSdata/BARNEGAT/9615exo-a.nc',
404),
('http://localhost:8082/thredds/fileServer/TSdata/BARNEGAT/9615exo-a.nc',
404),
('http://localhost:8082/thredds/wcs/TSdata/BARNEGAT/9615exo-a.nc', 404),
('http://localhost:8082/thredds/ncss/grid/TSdata/BARNEGAT/9615exo-a.nc',
404),
('http://localhost:8082/thredds/wms/TSdata/BARNEGAT/9615exo-a.nc', 404),
('http://localhost:8082/thredds/iso/TSdata/BARNEGAT/9615exo-a.nc', 404),
('http://localhost:8082/thredds/ncml/TSdata/BARNEGAT/9615exo-a.nc', 404),
('http://localhost:8082/thredds/uddc/TSdata/BARNEGAT/9615exo-a.nc',
404)]},
{'date': '2014-12-02T20:32:58Z',
'id': 'TSdata/BARNEGAT/9616ecp-a.nc',
'name': '9616ecp-a.nc',
'parent': 'TSdata/BARNEGAT',
'parent_type': 'dataset',
'urls': [('http://localhost:8082/thredds/dodsC/TSdata/BARNEGAT/9616ecp-a.nc',
404),
('http://localhost:8082/thredds/fileServer/TSdata/BARNEGAT/9616ecp-a.nc',
404),
('http://localhost:8082/thredds/wcs/TSdata/BARNEGAT/9616ecp-a.nc', 404),
('http://localhost:8082/thredds/ncss/grid/TSdata/BARNEGAT/9616ecp-a.nc',
404),
('http://localhost:8082/thredds/wms/TSdata/BARNEGAT/9616ecp-a.nc', 404),
('http://localhost:8082/thredds/iso/TSdata/BARNEGAT/9616ecp-a.nc', 404),
('http://localhost:8082/thredds/ncml/TSdata/BARNEGAT/9616ecp-a.nc', 404),
('http://localhost:8082/thredds/uddc/TSdata/BARNEGAT/9616ecp-a.nc',
404)]},
{'date': '2014-12-02T20:32:58Z',
'id': 'TSdata/BARNEGAT/9617solot-a.nc',
'name': '9617solot-a.nc',
'parent': 'TSdata/BARNEGAT',
'parent_type': 'dataset',
'urls': [('http://localhost:8082/thredds/dodsC/TSdata/BARNEGAT/9617solot-a.nc',
404),
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{'date': '2014-12-02T20:33:08Z',
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{'date': '2014-12-02T20:33:08Z',
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{'date': '2014-12-02T20:33:09Z',
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{'date': '2014-12-02T20:33:22Z',
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{'date': '2014-12-02T20:33:23Z',
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{'date': '2014-12-02T20:33:23Z',
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{'date': '2014-12-02T20:33:36Z',
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{'date': '2014-12-02T20:33:36Z',
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{'date': '2014-12-02T20:33:36Z',
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{'date': '2014-12-02T20:33:36Z',
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{'date': '2014-12-02T20:33:57Z',
'id': 'TSdata/BARNEGAT/9773HRaqdb-cal.nc',
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{'date': '2014-12-02T20:33:58Z',
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{'date': '2014-12-02T20:34:13Z',
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{'date': '2014-12-02T20:34:28Z',
'id': 'TSdata/BARNEGAT/9774dw_trim.nc',
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{'date': '2014-12-02T20:34:28Z',
'id': 'TSdata/BARNEGAT/9775exo-a.nc',
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{'date': '2014-12-02T20:34:28Z',
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{'date': '2014-12-02T20:34:28Z',
'id': 'TSdata/BARNEGAT/9777solot-a.nc',
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{'date': '2014-12-02T20:34:43Z',
'id': 'TSdata/BARNEGAT/9781dw-a.nc',
'name': '9781dw-a.nc',
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('http://localhost:8082/thredds/uddc/TSdata/BARNEGAT/9781dw-a.nc', 404)]},
{'date': '2014-12-02T20:34:43Z',
'id': 'TSdata/BARNEGAT/9782ecn-a.nc',
'name': '9782ecn-a.nc',
'parent': 'TSdata/BARNEGAT',
'parent_type': 'dataset',
'urls': [('http://localhost:8082/thredds/dodsC/TSdata/BARNEGAT/9782ecn-a.nc',
404),
('http://localhost:8082/thredds/fileServer/TSdata/BARNEGAT/9782ecn-a.nc',
404),
('http://localhost:8082/thredds/wcs/TSdata/BARNEGAT/9782ecn-a.nc', 404),
('http://localhost:8082/thredds/ncss/grid/TSdata/BARNEGAT/9782ecn-a.nc',
404),
('http://localhost:8082/thredds/wms/TSdata/BARNEGAT/9782ecn-a.nc', 404),
('http://localhost:8082/thredds/iso/TSdata/BARNEGAT/9782ecn-a.nc', 404),
('http://localhost:8082/thredds/ncml/TSdata/BARNEGAT/9782ecn-a.nc', 404),
('http://localhost:8082/thredds/uddc/TSdata/BARNEGAT/9782ecn-a.nc',
404)]}],
'status': 200},
'http://localhost:8082/thredds/catalog/TSdata/catalog.xml': {'children': [{'id': 'TSdata',
'name': 'Times Series Data'},
{'href': 'ARGO_MERCHANT/catalog.xml',
'id': 'TSdata/ARGO_MERCHANT',
'parent': 'TSdata',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': 'BARNEGAT/catalog.xml',
'id': 'TSdata/BARNEGAT',
'parent': 'TSdata',
'parent_type': 'dataset',
'type': 'catalogRef'}],
'status': 200},
'http://localhost:8082/thredds/catalog/catalog.xml': {'children': [{'href': '/thredds/catalog/TSdata/catalog.xml',
'id': 'TSdata',
'type': 'catalogRef'}],
'status': 200}}
In [73]:
crawler = Crawl('http://localhost:8082/opendap/hyrax/catalog.xml')
tree = crawler.crawl()
tree
Out[73]:
{'http://localhost:8082/opendap/hyrax/Catalog/catalog.xml': {'status': 404},
'http://localhost:8082/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3zref.008/catalog.xml': {'children': [{'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3zref.008/',
'name': '/Nimbus7_TOMS_Level3/TOMSN7L3zref.008'},
{'date': '2011-02-24T21:04:34',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3zref.008/TOMSN7L3zref_19781101_19930506.tar.gz',
'name': 'TOMSN7L3zref_19781101_19930506.tar.gz',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3zref.008/',
'parent_type': 'dataset'}],
'status': 200},
'http://localhost:8082/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3ztoz.008/catalog.xml': {'children': [{'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3ztoz.008/',
'name': '/Nimbus7_TOMS_Level3/TOMSN7L3ztoz.008'},
{'date': '2011-02-24T21:04:34',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3ztoz.008/TOMSN7L3ztoz_19781101_19930506.tar.gz',
'name': 'TOMSN7L3ztoz_19781101_19930506.tar.gz',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3ztoz.008/',
'parent_type': 'dataset'}],
'status': 200},
'http://localhost:8082/opendap/hyrax/Nimbus7_TOMS_Level3/catalog.xml': {'children': [{'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/',
'name': '/Nimbus7_TOMS_Level3'},
{'href': 'TOMSN7L3zref.008/catalog.xml',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3zref.008/',
'name': 'TOMSN7L3zref.008',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': 'TOMSN7L3ztoz.008/catalog.xml',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3ztoz.008/',
'name': 'TOMSN7L3ztoz.008',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/',
'parent_type': 'dataset',
'type': 'catalogRef'}],
'status': 200},
'http://localhost:8082/opendap/hyrax/catalog.xml': {'children': [{'id': '/opendap/hyrax/',
'name': '/'},
{'href': 'Nimbus7_TOMS_Level3/catalog.xml',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/',
'name': 'Nimbus7_TOMS_Level3',
'parent': '/opendap/hyrax/',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': 'Catalog/catalog.xml',
'id': '/opendap/hyrax/Catalog/',
'name': 'Catalog',
'parent': '/opendap/hyrax/',
'parent_type': 'dataset',
'type': 'catalogRef'}],
'status': 200}}
In [9]:
crawler = Crawl('http://localhost:8082/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1981/catalog.xml')
tree = crawler.crawl()
tree
Out[9]:
{'http://localhost:8082/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1981/catalog.xml': {'children': [{'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1981/',
'name': '/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1981'},
{'date': '2011-02-24T15:15:35',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1981/L3_eryln_n7t_19810101.txt',
'name': 'L3_eryln_n7t_19810101.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1981/',
'parent_type': 'dataset',
'urls': [('http://localhost:8082/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1981/L3_eryln_n7t_19810101.txt',
404),
('http://localhost:8082/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1981/L3_eryln_n7t_19810101.txt',
404)]},
{'date': '2011-02-24T15:15:35',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1981/L3_eryln_n7t_19810102.txt',
'name': 'L3_eryln_n7t_19810102.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1981/',
'parent_type': 'dataset',
'urls': [('http://localhost:8082/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1981/L3_eryln_n7t_19810102.txt',
404),
('http://localhost:8082/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1981/L3_eryln_n7t_19810102.txt',
404)]},
{'date': '2011-02-24T15:15:36',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1981/L3_eryln_n7t_19810103.txt',
'name': 'L3_eryln_n7t_19810103.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1981/',
'parent_type': 'dataset',
'urls': [('http://localhost:8082/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1981/L3_eryln_n7t_19810103.txt',
404),
('http://localhost:8082/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1981/L3_eryln_n7t_19810103.txt',
404)]}],
'status': 200}}
In [15]:
# let's see what happens against a real site
# first with EOL - providing full url paths, no root
import time
from datetime import timedelta
start_time = time.time()
eol_crawl = Crawl('http://data.eol.ucar.edu/jedi/catalog/ucar.ncar.eol.project.ARC_MIP.thredds.xml', False)
tree = eol_crawl.crawl()
print 'EOL Crawler | crawl time: {0}'.format(timedelta(seconds=time.time() - start_time))
EOL Crawler | crawl time: 0:00:01.987477
Out[15]:
'\nnotes about eol thredds\n\ndo not always have IDs. \n'
In [16]:
tree
Out[16]:
{'http://data.eol.ucar.edu/jedi/catalog/ucar.ncar.eol.dataset.61_001.thredds.xml': {'children': [{'id': 'ucar.ncar.eol.dataset.61_001',
'name': 'ARCMIP: Atmospheric Initial and Boundary Conditions (Cassano)',
'urls': [('http://data.eol.ucar.edu/codiac/fgr_form/id=/61.001', 200)]}],
'status': 200},
'http://data.eol.ucar.edu/jedi/catalog/ucar.ncar.eol.dataset.61_002.thredds.xml': {'children': [{'id': 'ucar.ncar.eol.dataset.61_002',
'name': 'ARCMIP: CASPR-ARCMIP 1997 Dataset (Curry)',
'urls': [('http://data.eol.ucar.edu/codiac/fgr_form/id=/61.002', 200)]}],
'status': 200},
'http://data.eol.ucar.edu/jedi/catalog/ucar.ncar.eol.dataset.61_003.thredds.xml': {'children': [{'id': 'ucar.ncar.eol.dataset.61_003',
'name': 'ARCMIP: CASPR-ARCMIP 1998 Dataset (Curry)',
'urls': [('http://data.eol.ucar.edu/codiac/fgr_form/id=/61.003', 200)]}],
'status': 200},
'http://data.eol.ucar.edu/jedi/catalog/ucar.ncar.eol.dataset.61_004.thredds.xml': {'children': [{'id': 'ucar.ncar.eol.dataset.61_004',
'name': 'ARCMIP: ISCCP Cloud and Radiative Flux in 50km ARCMIP-EASE Grid (Curry)',
'urls': [('http://data.eol.ucar.edu/codiac/fgr_form/id=/61.004', 200)]}],
'status': 200},
'http://data.eol.ucar.edu/jedi/catalog/ucar.ncar.eol.dataset.61_005.thredds.xml': {'children': [{'id': 'ucar.ncar.eol.dataset.61_005',
'name': 'ARCMIP: CASPR-ARCMIP EASE GRID Data (Curry)',
'urls': [('http://data.eol.ucar.edu/codiac/fgr_form/id=/61.005', 200)]}],
'status': 200},
'http://data.eol.ucar.edu/jedi/catalog/ucar.ncar.eol.dataset.61_006.thredds.xml': {'children': [{'id': 'ucar.ncar.eol.dataset.61_006',
'name': 'ARCMIP: EASE-Grid Model Data',
'urls': [('http://data.eol.ucar.edu/codiac/fgr_form/id=/61.006', 200)]}],
'status': 200},
'http://data.eol.ucar.edu/jedi/catalog/ucar.ncar.eol.dataset.61_007.thredds.xml': {'children': [{'id': 'ucar.ncar.eol.dataset.61_007',
'name': 'ARCMIP: CASPR-ISCCP EASE-Grid Data',
'urls': [('http://data.eol.ucar.edu/codiac/fgr_form/id=/61.007', 200)]}],
'status': 200},
'http://data.eol.ucar.edu/jedi/catalog/ucar.ncar.eol.project.ARC_MIP.thredds.xml': {'children': [{'id': 'ucar.ncar.eol.project.ARC_MIP',
'name': 'ARC-MIP: Arctic Regional Climate Model Intercomparison Project'},
{'href': 'http://data.eol.ucar.edu/jedi/catalog/ucar.ncar.eol.dataset.61_001.thredds.xml',
'id': '',
'parent': 'ucar.ncar.eol.project.ARC_MIP',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': 'http://data.eol.ucar.edu/jedi/catalog/ucar.ncar.eol.dataset.61_002.thredds.xml',
'id': '',
'parent': 'ucar.ncar.eol.project.ARC_MIP',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': 'http://data.eol.ucar.edu/jedi/catalog/ucar.ncar.eol.dataset.61_003.thredds.xml',
'id': '',
'parent': 'ucar.ncar.eol.project.ARC_MIP',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': 'http://data.eol.ucar.edu/jedi/catalog/ucar.ncar.eol.dataset.61_005.thredds.xml',
'id': '',
'parent': 'ucar.ncar.eol.project.ARC_MIP',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': 'http://data.eol.ucar.edu/jedi/catalog/ucar.ncar.eol.dataset.61_007.thredds.xml',
'id': '',
'parent': 'ucar.ncar.eol.project.ARC_MIP',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': 'http://data.eol.ucar.edu/jedi/catalog/ucar.ncar.eol.dataset.61_006.thredds.xml',
'id': '',
'parent': 'ucar.ncar.eol.project.ARC_MIP',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': 'http://data.eol.ucar.edu/jedi/catalog/ucar.ncar.eol.dataset.61_004.thredds.xml',
'id': '',
'parent': 'ucar.ncar.eol.project.ARC_MIP',
'parent_type': 'dataset',
'type': 'catalogRef'}],
'status': 200}}
In [2]:
# and the acdisc (urlPath as child element of dataset)
# starting from a middle node just to verify the system
# see log tds_20150515-1133.log for the latest crawl
import time
from datetime import timedelta
start_time = time.time()
acdisc_crawl = Crawl('http://acdisc.gsfc.nasa.gov/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/catalog.xml', False)
try:
tree = acdisc_crawl.crawl()
except Exception as ex:
print 'Crawl failed {0}'.format(ex)
print 'ACDISC Crawler | crawl time: {0}'.format(timedelta(seconds=time.time() - start_time))
ACDISC Crawler | crawl time: 1:15:17.170706
In [4]:
tree
Out[4]:
{'http://acdisc.gsfc.nasa.gov/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/catalog.xml': {'children': [{'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/',
'name': '/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978'},
{'date': '2011-02-24T15:14:59',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781101.txt',
'name': 'L3_eryln_n7t_19781101.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/',
'parent_type': 'dataset',
'urls': [('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781101.txt',
200),
('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781101.txt',
200)]},
{'date': '2011-02-24T15:14:59',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781102.txt',
'name': 'L3_eryln_n7t_19781102.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/',
'parent_type': 'dataset',
'urls': [('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781102.txt',
200),
('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781102.txt',
200)]},
{'date': '2011-02-24T15:14:59',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781103.txt',
'name': 'L3_eryln_n7t_19781103.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/',
'parent_type': 'dataset',
'urls': [('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781103.txt',
200),
('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781103.txt',
200)]},
{'date': '2011-02-24T15:14:59',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781104.txt',
'name': 'L3_eryln_n7t_19781104.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/',
'parent_type': 'dataset',
'urls': [('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781104.txt',
200),
('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781104.txt',
200)]},
{'date': '2011-02-24T15:14:59',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781105.txt',
'name': 'L3_eryln_n7t_19781105.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/',
'parent_type': 'dataset',
'urls': [('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781105.txt',
200),
('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781105.txt',
200)]},
{'date': '2011-02-24T15:14:59',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781106.txt',
'name': 'L3_eryln_n7t_19781106.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/',
'parent_type': 'dataset',
'urls': [('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781106.txt',
200),
('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781106.txt',
200)]},
{'date': '2011-02-24T15:14:59',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781107.txt',
'name': 'L3_eryln_n7t_19781107.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/',
'parent_type': 'dataset',
'urls': [('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781107.txt',
200),
('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781107.txt',
200)]},
{'date': '2011-02-24T15:14:59',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781108.txt',
'name': 'L3_eryln_n7t_19781108.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/',
'parent_type': 'dataset',
'urls': [('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781108.txt',
200),
('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781108.txt',
200)]},
{'date': '2011-02-24T15:14:59',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781109.txt',
'name': 'L3_eryln_n7t_19781109.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/',
'parent_type': 'dataset',
'urls': [('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781109.txt',
200),
('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781109.txt',
200)]},
{'date': '2011-02-24T15:14:59',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781110.txt',
'name': 'L3_eryln_n7t_19781110.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/',
'parent_type': 'dataset',
'urls': [('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781110.txt',
200),
('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781110.txt',
200)]},
{'date': '2011-02-24T15:15:00',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/L3_eryln_n7t_19781111.txt',
'name': 'L3_eryln_n7t_19781111.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/',
'parent_type': 'dataset',
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('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930424.txt',
200)]},
{'date': '2011-02-24T15:19:21',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930425.txt',
'name': 'L3_eryln_n7t_19930425.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/',
'parent_type': 'dataset',
'urls': [('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930425.txt',
200),
('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930425.txt',
200)]},
{'date': '2011-02-24T15:19:21',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930426.txt',
'name': 'L3_eryln_n7t_19930426.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/',
'parent_type': 'dataset',
'urls': [('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930426.txt',
200),
('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930426.txt',
200)]},
{'date': '2011-02-24T15:19:21',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930427.txt',
'name': 'L3_eryln_n7t_19930427.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/',
'parent_type': 'dataset',
'urls': [('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930427.txt',
200),
('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930427.txt',
200)]},
{'date': '2011-02-24T15:19:21',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930428.txt',
'name': 'L3_eryln_n7t_19930428.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/',
'parent_type': 'dataset',
'urls': [('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930428.txt',
200),
('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930428.txt',
200)]},
{'date': '2011-02-24T15:19:22',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930429.txt',
'name': 'L3_eryln_n7t_19930429.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/',
'parent_type': 'dataset',
'urls': [('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930429.txt',
200),
('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930429.txt',
200)]},
{'date': '2011-02-24T15:19:22',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930430.txt',
'name': 'L3_eryln_n7t_19930430.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/',
'parent_type': 'dataset',
'urls': [('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930430.txt',
200),
('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930430.txt',
200)]},
{'date': '2011-02-24T15:19:22',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930501.txt',
'name': 'L3_eryln_n7t_19930501.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/',
'parent_type': 'dataset',
'urls': [('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930501.txt',
200),
('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930501.txt',
200)]},
{'date': '2011-02-24T15:19:22',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930502.txt',
'name': 'L3_eryln_n7t_19930502.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/',
'parent_type': 'dataset',
'urls': [('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930502.txt',
200),
('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930502.txt',
200)]},
{'date': '2011-02-24T15:19:22',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930503.txt',
'name': 'L3_eryln_n7t_19930503.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/',
'parent_type': 'dataset',
'urls': [('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930503.txt',
200),
('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930503.txt',
200)]},
{'date': '2011-02-24T15:19:22',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930504.txt',
'name': 'L3_eryln_n7t_19930504.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/',
'parent_type': 'dataset',
'urls': [('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930504.txt',
200),
('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930504.txt',
200)]},
{'date': '2011-02-24T15:19:22',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930505.txt',
'name': 'L3_eryln_n7t_19930505.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/',
'parent_type': 'dataset',
'urls': [('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930505.txt',
200),
('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930505.txt',
200)]},
{'date': '2011-02-24T15:19:22',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930506.txt',
'name': 'L3_eryln_n7t_19930506.txt',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/',
'parent_type': 'dataset',
'urls': [('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930506.txt',
200),
('http://acdisc.gsfc.nasa.gov/opendap/hyrax//Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/L3_eryln_n7t_19930506.txt',
200)]}],
'status': 200},
'http://acdisc.gsfc.nasa.gov/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/catalog.xml': {'children': [{'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/',
'name': '/Nimbus7_TOMS_Level3/TOMSN7L3dery.008'},
{'href': '1978/catalog.xml',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1978/',
'name': '1978',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': '1979/catalog.xml',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1979/',
'name': '1979',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': '1980/catalog.xml',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1980/',
'name': '1980',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': '1981/catalog.xml',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1981/',
'name': '1981',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': '1982/catalog.xml',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1982/',
'name': '1982',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': '1983/catalog.xml',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1983/',
'name': '1983',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': '1984/catalog.xml',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1984/',
'name': '1984',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': '1985/catalog.xml',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1985/',
'name': '1985',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': '1986/catalog.xml',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1986/',
'name': '1986',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': '1987/catalog.xml',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1987/',
'name': '1987',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': '1988/catalog.xml',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1988/',
'name': '1988',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': '1989/catalog.xml',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1989/',
'name': '1989',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': '1990/catalog.xml',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1990/',
'name': '1990',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': '1991/catalog.xml',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1991/',
'name': '1991',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': '1992/catalog.xml',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1992/',
'name': '1992',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/',
'parent_type': 'dataset',
'type': 'catalogRef'},
{'href': '1993/catalog.xml',
'id': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/1993/',
'name': '1993',
'parent': '/opendap/hyrax/Nimbus7_TOMS_Level3/TOMSN7L3dery.008/',
'parent_type': 'dataset',
'type': 'catalogRef'}],
'status': 200}}
In [23]:
import time
from datetime import timedelta
start_time = time.time()
# ha, oops. however most of the .nc files are 400s (tds_20150517-1556.log)
esrl_crawl = Crawl('http://www.esrl.noaa.gov/psd/thredds/catalog/Datasets/noaa.oisst.v2.derived/catalog.xml', False)
try:
tree = esrl_crawl.crawl()
except Exception as ex:
print 'Crawl failed {0}'.format(ex)
print 'ESRL Crawler | crawl time: {0}'.format(timedelta(seconds=time.time() - start_time))
ESRL Crawler | crawl time: 0:00:00.885366
In [ ]:
import time
from datetime import timedelta
start_time = time.time()
esrl_crawl = Crawl('http://www.esrl.noaa.gov/psd/thredds/catalog/Datasets/catalog.xml', False)
try:
tree = esrl_crawl.crawl()
except Exception as ex:
print 'Crawl failed {0}'.format(ex)
print 'ESRL Crawler | crawl time: {0}'.format(timedelta(seconds=time.time() - start_time))
# NOTE: killed this one early - that's a big log file - so no tree
GET Request http://www.esrl.noaa.gov/psd/thredds/catalog/Datasets/dai_pdsi/catalog.xml: 200
Has XML = True
Services found = 4: ['/psd/thredds/dodsC', '/psd/thredds/fileServer', '/psd/thredds/wcs', '/psd/thredds/wms']
number of elements found 3
DATASET element in http://www.esrl.noaa.gov/psd/thredds/catalog/Datasets/dai_pdsi/catalog.xml (Datasets/dai_pdsi)
DATASET element in http://www.esrl.noaa.gov/psd/thredds/catalog/Datasets/dai_pdsi/catalog.xml (Datasets/dai_pdsi/pdsi.mon.mean.nc)
Parsing http://www.esrl.noaa.gov/psd/thredds/catalog/Datasets/dai_pdsi/catalog.xml, /psd/thredds/dodsC/Datasets/dai_pdsi/pdsi.mon.mean.nc
Generated url = http://www.esrl.noaa.gov/psd/thredds/dodsC/Datasets/dai_pdsi/pdsi.mon.mean.nc
Parsing http://www.esrl.noaa.gov/psd/thredds/catalog/Datasets/dai_pdsi/catalog.xml, /psd/thredds/fileServer/Datasets/dai_pdsi/pdsi.mon.mean.nc
Generated url = http://www.esrl.noaa.gov/psd/thredds/fileServer/Datasets/dai_pdsi/pdsi.mon.mean.nc
Parsing http://www.esrl.noaa.gov/psd/thredds/catalog/Datasets/dai_pdsi/catalog.xml, /psd/thredds/wcs/Datasets/dai_pdsi/pdsi.mon.mean.nc
Generated url = http://www.esrl.noaa.gov/psd/thredds/wcs/Datasets/dai_pdsi/pdsi.mon.mean.nc
Parsing http://www.esrl.noaa.gov/psd/thredds/catalog/Datasets/dai_pdsi/catalog.xml, /psd/thredds/wms/Datasets/dai_pdsi/pdsi.mon.mean.nc
Generated url = http://www.esrl.noaa.gov/psd/thredds/wms/Datasets/dai_pdsi/pdsi.mon.mean.nc
HEAD Request http://www.esrl.noaa.gov/psd/thredds/dodsC/Datasets/dai_pdsi/pdsi.mon.mean.nc: 400
HEAD Request http://www.esrl.noaa.gov/psd/thredds/fileServer/Datasets/dai_pdsi/pdsi.mon.mean.nc: 200
HEAD Request http://www.esrl.noaa.gov/psd/thredds/wms/Datasets/dai_pdsi/pdsi.mon.mean.nc: 400
HEAD Request http://www.esrl.noaa.gov/psd/thredds/wcs/Datasets/dai_pdsi/pdsi.mon.mean.nc: 400where we are typically only catching one of the four supported service endpoints.
Note: for the WxS, we can try to append the three required parameters, as this:
is a valid request. I am guessing about the version and guessing that it will downgrade to whatever is supported.
In [25]:
# the stellwagen (mostly just more supported thredds services)
import time
from datetime import timedelta
start_time = time.time()
stellwagen_crawl = Crawl('http://stellwagen.er.usgs.gov/thredds/catalog/TSdata/NEARSHORE/catalog.xml', False)
try:
tree = stellwagen_crawl.crawl()
except Exception as ex:
print 'Crawl failed {0}'.format(ex)
print 'Stellwagen Crawler | crawl time: {0}'.format(timedelta(seconds=time.time() - start_time))
print 'Stellwagen Crawler | crawl time: {0}'.format(timedelta(seconds=time.time() - start_time))
Stellwagen Crawler | crawl time: 0:00:01.023836
In [13]:
tree
# that doesn't look right
# but the generated log is okay.
Out[13]:
{'http://stellwagen.er.usgs.gov/thredds/catalog/TSdata/catalog.xml': {'children': [{'id': 'TSdata',
'name': 'Times Series Data'}],
'status': 200}}
In [37]:
# testing the wxs query parameters against not stellwagen (flaky as of 5/18/2015 @ 9:30 mdt)
import time
from datetime import timedelta
start_time = time.time()
esrl_crawl = Crawl('http://www.esrl.noaa.gov/psd/thredds/catalog/Datasets/noaa.oisst.v2.derived/catalog.xml', False)
try:
tree = esrl_crawl.crawl()
except Exception as ex:
print 'Crawl failed {0}'.format(ex)
print 'ESRL Crawler | crawl time: {0}'.format(timedelta(seconds=time.time() - start_time))
print 'ESRL Crawler | crawl time: {0}'.format(timedelta(seconds=time.time() - start_time))
ESRL Crawler | crawl time: 0:00:02.765279
In [5]:
hrefs_to_parse = ['catalog.xml']
hrefs_parsed = []
tree = []
class catref():
def __init__(self, the_id, parent_id, rel_path):
self.the_id = the_id
self.parent_id = parent_id
self.rel_path = rel_path
def __repr__(self):
return '<CatRef {0} (parent: {1}, relative_path: {2})>'.format(self.the_id, self.parent_id, self.rel_path)
class dataset():
def __init__(self, the_id, parent_id, rel_path, terminus):
self.the_id = the_id
self.parent_id = parent_id
self.rel_path = rel_path
self.terminus = terminus
def __repr__(self):
return '<Dataset {0} (parent: {1}, relative_path: {2}, terminus: {3})>'.format(
self.the_id, self.parent_id, self.rel_path, self.terminus
)
while hrefs_to_parse:
href_path = hrefs_to_parse.pop()
path = generate_path(href_path)
print '## PARSING : {0} from {1}'.format(path, href_path)
response = request(path)
xml = parse_xml(response)
prefix = '/'.join(path.split('/')[1:-1])
elements = xml.xpath('//*[local-name()="catalogRef" or local-name()="dataset"]')
print '\thas {0} elements'.format(len(elements))
for element in elements:
tag = extract_element_tag(element.tag)
if tag == 'catalogRef':
new_path = element.attrib.get('{http://www.w3.org/1999/xlink}href', '')
elif tag == 'dataset':
new_path = element.attrib.get('urlPath', '')
the_id = element.attrib.get('ID', '')
terminus = tag == 'dataset' and 'urlPath' in element.attrib
if not new_path:
print '\t!!!! Failed to extract path', element.attrib.keys()
continue
new_path = new_path.replace('/thredds/catalog/', '')
new_path = '/'.join([prefix, new_path])
if new_path.startswith('/'):
new_path = new_path[1:]
if not terminus:
hrefs_to_parse.append(new_path)
else:
print '\t--------Terminus : {0}'.format(new_path)
if tag == 'catalogRef':
tree.append(catref(the_id, href_path, new_path))
elif tag == 'dataset':
tree.append(dataset(the_id, href_path, new_path, terminus))
hrefs_parsed.append(path)
print '## Left to parse : {0}'.format(len(hrefs_to_parse))
## PARSING : xml_samples/catalog.xml from catalog.xml
has 1 elements
## Left to parse : 1
## PARSING : xml_samples/TSdata/catalog.xml from TSdata/catalog.xml
has 3 elements
!!!! Failed to extract path ['name', 'ID']
## Left to parse : 2
## PARSING : xml_samples/TSdata/BARNEGAT/catalog.xml from TSdata/BARNEGAT/catalog.xml
has 30 elements
!!!! Failed to extract path ['name', 'ID']
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9611ecp-a.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9612solot-a.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9613HRaqd-cal.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9614dw-a.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9615exo-a.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9616ecp-a.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9617solot-a.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9621dw-a.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9622ecn-a.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9631ecp-a.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9632solot-a.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9633HRaqd-cal.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9634dw-a.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9635exo-a.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9636ecp-a.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9637solot-a.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9641dw-a.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9642ecn-a.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9771ecp-a.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9772solot-a.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9773HRaqdb-cal.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9773HRaqds-cal.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9774dw-a.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9774dw_trim.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9775exo-a.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9776ecp-a.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9777solot-a.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9781dw-a.nc
--------Terminus : TSdata/BARNEGAT/TSdata/BARNEGAT/9782ecn-a.nc
## Left to parse : 1
## PARSING : xml_samples/TSdata/ARGO_MERCHANT/catalog.xml from TSdata/ARGO_MERCHANT/catalog.xml
has 7 elements
!!!! Failed to extract path ['name', 'ID']
--------Terminus : TSdata/ARGO_MERCHANT/TSdata/ARGO_MERCHANT/1211-A1H.cdf
--------Terminus : TSdata/ARGO_MERCHANT/TSdata/ARGO_MERCHANT/1211-AA.cdf
--------Terminus : TSdata/ARGO_MERCHANT/TSdata/ARGO_MERCHANT/1211P-A.cdf
--------Terminus : TSdata/ARGO_MERCHANT/TSdata/ARGO_MERCHANT/1211P-A1H.cdf
--------Terminus : TSdata/ARGO_MERCHANT/TSdata/ARGO_MERCHANT/1211TR-A.cdf
--------Terminus : TSdata/ARGO_MERCHANT/TSdata/ARGO_MERCHANT/1211TR-A1H.cdf
## Left to parse : 0
In [6]:
tree
Out[6]:
[<CatRef TSdata (parent: catalog.xml, relative_path: TSdata/catalog.xml)>,
<CatRef TSdata/ARGO_MERCHANT (parent: TSdata/catalog.xml, relative_path: TSdata/ARGO_MERCHANT/catalog.xml)>,
<CatRef TSdata/BARNEGAT (parent: TSdata/catalog.xml, relative_path: TSdata/BARNEGAT/catalog.xml)>,
<Dataset TSdata/BARNEGAT/9611ecp-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9611ecp-a.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9612solot-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9612solot-a.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9613HRaqd-cal.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9613HRaqd-cal.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9614dw-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9614dw-a.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9615exo-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9615exo-a.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9616ecp-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9616ecp-a.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9617solot-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9617solot-a.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9621dw-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9621dw-a.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9622ecn-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9622ecn-a.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9631ecp-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9631ecp-a.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9632solot-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9632solot-a.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9633HRaqd-cal.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9633HRaqd-cal.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9634dw-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9634dw-a.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9635exo-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9635exo-a.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9636ecp-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9636ecp-a.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9637solot-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9637solot-a.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9641dw-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9641dw-a.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9642ecn-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9642ecn-a.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9771ecp-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9771ecp-a.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9772solot-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9772solot-a.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9773HRaqdb-cal.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9773HRaqdb-cal.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9773HRaqds-cal.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9773HRaqds-cal.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9774dw-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9774dw-a.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9774dw_trim.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9774dw_trim.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9775exo-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9775exo-a.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9776ecp-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9776ecp-a.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9777solot-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9777solot-a.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9781dw-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9781dw-a.nc, terminus: True)>,
<Dataset TSdata/BARNEGAT/9782ecn-a.nc (parent: TSdata/BARNEGAT/catalog.xml, relative_path: TSdata/BARNEGAT/TSdata/BARNEGAT/9782ecn-a.nc, terminus: True)>,
<Dataset TSdata/ARGO_MERCHANT/1211-A1H.cdf (parent: TSdata/ARGO_MERCHANT/catalog.xml, relative_path: TSdata/ARGO_MERCHANT/TSdata/ARGO_MERCHANT/1211-A1H.cdf, terminus: True)>,
<Dataset TSdata/ARGO_MERCHANT/1211-AA.cdf (parent: TSdata/ARGO_MERCHANT/catalog.xml, relative_path: TSdata/ARGO_MERCHANT/TSdata/ARGO_MERCHANT/1211-AA.cdf, terminus: True)>,
<Dataset TSdata/ARGO_MERCHANT/1211P-A.cdf (parent: TSdata/ARGO_MERCHANT/catalog.xml, relative_path: TSdata/ARGO_MERCHANT/TSdata/ARGO_MERCHANT/1211P-A.cdf, terminus: True)>,
<Dataset TSdata/ARGO_MERCHANT/1211P-A1H.cdf (parent: TSdata/ARGO_MERCHANT/catalog.xml, relative_path: TSdata/ARGO_MERCHANT/TSdata/ARGO_MERCHANT/1211P-A1H.cdf, terminus: True)>,
<Dataset TSdata/ARGO_MERCHANT/1211TR-A.cdf (parent: TSdata/ARGO_MERCHANT/catalog.xml, relative_path: TSdata/ARGO_MERCHANT/TSdata/ARGO_MERCHANT/1211TR-A.cdf, terminus: True)>,
<Dataset TSdata/ARGO_MERCHANT/1211TR-A1H.cdf (parent: TSdata/ARGO_MERCHANT/catalog.xml, relative_path: TSdata/ARGO_MERCHANT/TSdata/ARGO_MERCHANT/1211TR-A1H.cdf, terminus: True)>]
In [19]:
import urllib
urlparse.urlunparse((
'http',
'www.example.com',
'', None,
urllib.urlencode({'query': 'river'}),
None
))
Out[19]:
'http://www.example.com?query=river'
In [ ]:
Content source: b-cube/thredds_catalog_crawler
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