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from environment import *

with open("../project.json") as io:

    PROJECT_JSON = json.load(io)

PATH = make_path_dict(PROJECT_JSON)


    

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gene_x_sample = pd.read_csv(PATH["gene_x_sample.processed.tsv"], sep="\t", index_col=0)


    

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target_x_sample = pd.DataFrame(columns=gene_x_sample.columns)

target_x_sample.index.name = "Target"

for target_name, target_values in PROJECT_JSON["target"].items():

    target_x_sample.loc[target_name] = np.asarray(target_values.split(), dtype=int)

target_x_sample.to_csv(PATH["target_x_sample.tsv"], sep="\t")

target_x_sample